Pregenerated sensors for USP21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053483Ensembl transcript IDs: ENSMUST00000065941.12, ENSMUST00000111305.8, ENSMUST00000149187.8, ENSMUST00000174720.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGACACTACCCGAGTGGTTaGAAAGGGCATACAGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGHYPSG*KGHTAG Trigger: ACCAGCTGTATGCCCTTTGCAACCACTCGGGTAGTG...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
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| 3UTR-3UTR CCA 90 bp | GTAGTGGCCATAGTGGACACTACCCGAGTGGTTGCAAAGGGCATACAGCTGGTAACACATCCTGAAAGGTaGCAAAGAAAGTCAGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: VVAIVDTTRVVAKGIQLVTHPER*QRKSGW Trigger: CCACCCTGACTTTCTTTGCCACCTTTCAGGATGTGT...TACCAGCTGTATGCCCTTTGCAACCACTCGGGTAGTGTCCACTATGGCCACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
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| 3UTR-3UTR TCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAATCCCCCAACACATCCTaGAAGGTGGCAAAGAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: TWSRVWWFLYMGQENKAESPNTS*KVAKKV Trigger: GACTTTCTTTGCCACCTTTCAGGATGTGTTGGGGGA...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTGAAGGTTTTCACAGGTaGCAGGGCTTCAAGATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLEGFHR*QGFKMV Trigger: CACCATCTTGAAGCCCTGGCACCTGTGAAAACCTTC...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| 3UTR-3UTR GCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGAAGGTTTTCACAGGTaGCAGGGCTTCAAGATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: TWSRVWWFLYMGQENKAEEGFHR*QGFKMV Trigger: CACCATCTTGAAGCCCTGGCACCTGTGAAAACCTTC...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGGGTGGTTTCTGTACATaGGACAGGAAAACAAGGCGG | + |
|
Preference number: 2 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQGGFCT*DRKTRR Trigger: CCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACC...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTGGTGGTTTCTGTACATaGGACAGGAAAACAAGGCGG | + |
|
Preference number: 2 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLGGFCT*DRKTRR Trigger: CCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACC...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| 3UTR TCA 72 bp | GTAGACAGGGCTTCCCTCCATTCCCCCAACACATCCTaGAAGGTGGCAAAGAAAGTCAGGGTGGCAGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VDRASLHSPNTS*KVAKKVRVAGF Trigger: AAAACCTGCCACCCTGACTTTCTTTGCCACCTTTCAGGATGTGTTGGGGGAATGGAGGGAAGCCCTGTCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
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| 3UTR-3UTR CAA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAGGGGGCTTAAGGGTGTaGGGAAGGTTTTCACAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGGGLRV*GRFSQV Trigger: CACCTGTGAAAACCTTCCCAACACCCTTAAGCCCCC...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| 3UTR-3UTR CAA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGGGGGGCTTAAGGGTGTaGGGAAGGTTTTCACAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQGGLRV*GRFSQV Trigger: CACCTGTGAAAACCTTCCCAACACCCTTAAGCCCCC...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| 3UTR-3UTR CAA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAACACTACCCGAGTGGTaGCAAAGGGCATACAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGTLPEW*QRAYSW Trigger: CCAGCTGTATGCCCTTTGCAACCACTCGGGTAGTGT...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
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| CDS-3UTR GCA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGATCGCCAGCGCCACGGTaGCCTCCCAAGGCAATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGSPAPR*PPKAIP Trigger: GGGGATTGCCTTGGGAGGGCACCGTGGCGCTGGCGA...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR GCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAATCGCCAGCGCCACGGTaGCCTCCCAAGGCAATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAESPAPR*PPKAIP Trigger: GGGGATTGCCTTGGGAGGGCACCGTGGCGCTGGCGA...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR GCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTGGCCAAGATTGGCGGTaGCCGGCGCCCTCGTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLGQDWR*PAPSSV Trigger: AACCGACGAGGGCGCCGGGCACCGCCAATCTTGGCC...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR GCA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAGGCCAAGATTGGCGGTaGCCGGCGCCCTCGTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGGQDWR*PAPSSV Trigger: AACCGACGAGGGCGCCGGGCACCGCCAATCTTGGCC...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR GCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGGGCCAAGATTGGCGGTaGCCGGCGCCCTCGTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQGQDWR*PAPSSV Trigger: AACCGACGAGGGCGCCGGGCACCGCCAATCTTGGCC...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR CCA 90 bp | ACAGCTGGTAGACAGGGCTTCCCTCCATTCCCCCAACACATCCTGAAAGGTGGCCAGCCCGGAATCGGGTaGGATTCACAGCTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TAGRQGFPPFPQHILKGGQPGIG*DSQLHR Trigger: CCTGTGAAGCTGTGAATCCCACCCGATTCCGGGCTG...GCCACCTTTCAGGATGTGTTGGGGGAATGGAGGGAAGCCCTGTCTACCAGCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
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| CDS-3UTR CCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGGCTTCTGTGAGTTCCTaGGCTCGGCCTCCTCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQASVSS*ARPPPG Trigger: GCCCGGAGGAGGCCGAGCCCAGGAACTCACAGAAGC...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR CCA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAGCTTCTGTGAGTTCCTaGGCTCGGCCTCCTCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGASVSS*ARPPPG Trigger: GCCCGGAGGAGGCCGAGCCCAGGAACTCACAGAAGC...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCCCCAACACATCCTGAAAGGTGGCAAAGAAAGTCAGGGTGGCAGGTTTTCGCTTCTGTGAGTTCCTaGGCTCGGCCTCCTCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IPPTHPERWQRKSGWQVFASVSS*ARPPPG Trigger: GCCCGGAGGAGGCCGAGCCCAGGAACTCACAGAAGC...GAAAACCTGCCACCCTGACTTTCTTTGCCACCTTTCAGGATGTGTTGGGGGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
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| CDS-3UTR TCA 90 bp | TCCATTCCCCCAACACATCCTGAAAGGTGGCAAAGAAAGTCAGGGTGGCAGGTTCTCGGGGCTGTACATTaGCAGGTGGCTCTCGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SIPPTHPERWQRKSGWQVLGAVH*QVALES Trigger: GGACTCGAGAGCCACCTGTCAATGTACAGCCCCGAG...AACCTGCCACCCTGACTTTCTTTGCCACCTTTCAGGATGTGTTGGGGGAATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
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| CDS-3UTR GCA 90 bp | GTAGTGGCCATAGTGGACACTACCCGAGTGGTTGCAAAGGGCATACAGCTGGTAGACGCAAGTCCCCACTaGTCACAGACTTGGAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVAIVDTTRVVAKGIQLVDASPH*SQTWNG Trigger: CCCGTTCCAAGTCTGTGAGCAGTGGGGACTTGCGTC...TACCAGCTGTATGCCCTTTGCAACCACTCGGGTAGTGTCCACTATGGCCACTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
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| CDS-3UTR GCA 90 bp | ACAGCTGGTAGACAGGGCTTCCCTCCATTCCCCCAACACATCCTGAAAGGTGGCGAAGAGGCCTTGTGCTaGTCAAACACTGTAGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: TAGRQGFPPFPQHILKGGEEALC*SNTVAR Trigger: CCGTGCTACAGTGTTTGAGCAGCACAAGGCCTCTTC...GCCACCTTTCAGGATGTGTTGGGGGAATGGAGGGAAGCCCTGTCTACCAGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
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| CDS-3UTR GCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGCCTCCGGGCACCTCTTaGCGGAAGTCCCTTCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQPPGTS*RKSLRR Trigger: TCTGCGAAGGGACTTCCGGCAAGAGGTGCCCGGAGG...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR GCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAACCTCCGGGCACCTCTTaGCGGAAGTCCCTTCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAEPPGTS*RKSLRR Trigger: TCTGCGAAGGGACTTCCGGCAAGAGGTGCCCGGAGG...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR GCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTCCTCCGGGCACCTCTTaGCGGAAGTCCCTTCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLPPGTS*RKSLRR Trigger: TCTGCGAAGGGACTTCCGGCAAGAGGTGCCCGGAGG...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR CCA 90 bp | ACAGCTGGTAGACAGGGCTTCCCTCCATTCCCCCAACACATCCTGAAAGGTGGCGAAGGGACGTATTTCTaGAAGACAGCCCGGAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: TAGRQGFPPFPQHILKGGEGTYF*KTARNR Trigger: CCGATTCCGGGCTGTCTTCCAGAAATACGTCCCTTC...GCCACCTTTCAGGATGTGTTGGGGGAATGGAGGGAAGCCCTGTCTACCAGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
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| CDS-3UTR TCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTCTCGGGGCTGTACATTaGCAGGTGGCTCTCGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLLGAVH*QVALES Trigger: GGACTCGAGAGCCACCTGTCAATGTACAGCCCCGAG...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR TCA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGACTGCAAAGGCTTCTGTaGGTTCCTGGGCTCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGLQRLL*VPGLGL Trigger: GAGGCCGAGCCCAGGAACTCACAGAAGCCTTTGCAG...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR GCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGGCGCTCCTTGCTGCGTaGCCGGGGAGGAAATGGTAT | + |
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Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQALLAA*PGRKWY Trigger: ATACCATTTCCTCCCCGGGCACGCAGCAAGGAGCGC...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR GCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTGCGCTCCTTGCTGCGTaGCCGGGGAGGAAATGGTAT | + |
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Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLALLAA*PGRKWY Trigger: ATACCATTTCCTCCCCGGGCACGCAGCAAGGAGCGC...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR GCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGCGCTCCTTGCTGCGTaGCCGGGGAGGAAATGGTAT | + |
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Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAEALLAA*PGRKWY Trigger: ATACCATTTCCTCCCCGGGCACGCAGCAAGGAGCGC...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR CCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAACTGGGGGACCTGGCCTaGGAGGCAAAGGTCGTAACA | + |
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Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAELGDLA*EAKVVT Trigger: TGTTACGACCTTTGCCTCCCAGGCCAGGTCCCCCAG...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR CCA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGACTGGGGGACCTGGCCTaGGAGGCAAAGGTCGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGLGDLA*EAKVVT Trigger: TGTTACGACCTTTGCCTCCCAGGCCAGGTCCCCCAG...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR CCA 90 bp | ATTCCCCCAACACATCCTGAAAGGTGGCAAAGAAAGTCAGGGTGGCAGGTTTTCCTGGGGGACCTGGCCTaGGAGGCAAAGGTCGTAACA | + |
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Preference number: 4 (lower is better) Translates to: IPPTHPERWQRKSGWQVFLGDLA*EAKVVT Trigger: TGTTACGACCTTTGCCTCCCAGGCCAGGTCCCCCAG...GAAAACCTGCCACCCTGACTTTCTTTGCCACCTTTCAGGATGTGTTGGGGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
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| CDS-3UTR CCA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGACTTGAGCCTTTCATCTaGGGGACCTGGCCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGLEPFI*GTWPGR Trigger: CCTCCCAGGCCAGGTCCCCCAGATGAAAGGCTCAAG...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR CCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAACTTGAGCCTTTCATCTaGGGGACCTGGCCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAELEPFI*GTWPGR Trigger: CCTCCCAGGCCAGGTCCCCCAGATGAAAGGCTCAAG...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR CCA 90 bp | ATTCCCCCAACACATCCTGAAAGGTGGCAAAGAAAGTCAGGGTGGCAGGTTTTCCTTGAGCCTTTCATCTaGGGGACCTGGCCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPPTHPERWQRKSGWQVFLEPFI*GTWPGR Trigger: CCTCCCAGGCCAGGTCCCCCAGATGAAAGGCTCAAG...GAAAACCTGCCACCCTGACTTTCTTTGCCACCTTTCAGGATGTGTTGGGGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
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| CDS-3UTR CCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAATCCTCCTCGGCAAGGTaGAGAGGGAACTGGTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAESSSAR*RGNWSA Trigger: AGCGGACCAGTTCCCTCTCCACCTTGCCGAGGAGGA...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR CCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGTCCTCCTCGGCAAGGTaGAGAGGGAACTGGTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQSSSAR*RGNWSA Trigger: AGCGGACCAGTTCCCTCTCCACCTTGCCGAGGAGGA...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR GCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTGGGAACCCCATGATCTaGTCGAAGGGGACCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLGNPMI*SKGTSR Trigger: CCTAGAGGTCCCCTTCGAGCAGATCATGGGGTTCCC...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS-3UTR GCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGAACCCCATGATCTaGTCGAAGGGGACCTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAEGNPMI*SKGTSR Trigger: CCTAGAGGTCCCCTTCGAGCAGATCATGGGGTTCCC...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR GCA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAGACGCAAGTCCCCACTaGTCACAGACTTGGAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGDASPH*SQTWNG Trigger: CCCGTTCCAAGTCTGTGAGCAGTGGGGACTTGCGTC...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTGACGCAAGTCCCCACTaGTCACAGACTTGGAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLDASPH*SQTWNG Trigger: CCCGTTCCAAGTCTGTGAGCAGTGGGGACTTGCGTC...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR GCA 90 bp | TCCATTCCCCCAACACATCCTGAAAGGTGGCAAAGAAAGTCAGGGTGGCAGGTTCGGTTGATCTCAAGGTaGAACCGCTCCATGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIPPTHPERWQRKSGWQVRLISR*NRSMRS Trigger: GCTCCTCATGGAGCGGTTGCACCTTGAGATCAACCG...AACCTGCCACCCTGACTTTCTTTGCCACCTTTCAGGATGTGTTGGGGGAATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAGTTTGGCCCAGGAACTaGGTTTCGGCGCTCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGVWPRN*VSALLA Trigger: AGCAAGGAGCGCCGAAACCCAGTTCCTGGGCCAAAC...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGTTTGGCCCAGGAACTaGGTTTCGGCGCTCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAEVWPRN*VSALLA Trigger: AGCAAGGAGCGCCGAAACCCAGTTCCTGGGCCAAAC...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTTGGAACGGGCTAAGTTaGTCCGGGATGGGAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLWNGLS*SGMGEA Trigger: TGCCTCTCCCATCCCGGACCAACTTAGCCCGTTCCA...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAATGGAACGGGCTAAGTTaGTCCGGGATGGGAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAEWNGLS*SGMGEA Trigger: TGCCTCTCCCATCCCGGACCAACTTAGCCCGTTCCA...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGTGGAACGGGCTAAGTTaGTCCGGGATGGGAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQWNGLS*SGMGEA Trigger: TGCCTCTCCCATCCCGGACCAACTTAGCCCGTTCCA...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | GTAGTGGCCATAGTGGACACTACCCGAGTGGTTGCAAAGGGCATACAGCTGGTACACTGCTCACAGACTTaGAACGGGCTAAGTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVAIVDTTRVVAKGIQLVHCSQT*NGLSWS Trigger: GGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAGTG...TACCAGCTGTATGCCCTTTGCAACCACTCGGGTAGTGTCCACTATGGCCACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAACGTCTCAAAGTGGGTaGCTCAGGCCGGAGTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGTSQSG*LRPECQ Trigger: TTGGCACTCCGGCCTGAGCCACCCACTTTGAGACGT...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTACGTCTCAAAGTGGGTaGCTCAGGCCGGAGTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLTSQSG*LRPECQ Trigger: TTGGCACTCCGGCCTGAGCCACCCACTTTGAGACGT...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGACGTCTCAAAGTGGGTaGCTCAGGCCGGAGTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQTSQSG*LRPECQ Trigger: TTGGCACTCCGGCCTGAGCCACCCACTTTGAGACGT...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | TCCATTCCCCCAACACATCCTGAAAGGTGGCAAAGAAAGTCAGGGTGGCAGGTTATGTGGAAGGAGCCATaGGAAGTAGGGGGCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SIPPTHPERWQRKSGWQVMWKEP*EVGGSV Trigger: GACAGAGCCCCCTACTTCCCATGGCTCCTTCCACAT...AACCTGCCACCCTGACTTTCTTTGCCACCTTTCAGGATGTGTTGGGGGAATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTCAGCCCGGAATCGGGTaGGATTCACAGCTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLQPGIG*DSQLHR Trigger: CCTGTGAAGCTGTGAATCCCACCCGATTCCGGGCTG...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAACAGCCCGGAATCGGGTaGGATTCACAGCTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAEQPGIG*DSQLHR Trigger: CCTGTGAAGCTGTGAATCCCACCCGATTCCGGGCTG...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR TCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAACCAGCTCCAGTTTCTTaGGCCTTTCATCTGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAEPAPVS*AFHLGD Trigger: GTCCCCCAGATGAAAGGCTCAAGAAACTGGAGCTGG...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR TCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGCCAGCTCCAGTTTCTTaGGCCTTTCATCTGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQPAPVS*AFHLGD Trigger: GTCCCCCAGATGAAAGGCTCAAGAAACTGGAGCTGG...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR TCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGGGTGCAACCGCTCCATaGGGAGCTTCAGGAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQGATAP*GASGTL Trigger: AAGAGTTCCTGAAGCTCCTCATGGAGCGGTTGCACC...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR TCA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAGGTGCAACCGCTCCATaGGGAGCTTCAGGAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGGATAP*GASGTL Trigger: AAGAGTTCCTGAAGCTCCTCATGGAGCGGTTGCACC...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR GCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGCGGTTGATCTCAAGGTaGAACCGCTCCATGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQRLISR*NRSMRS Trigger: GCTCCTCATGGAGCGGTTGCACCTTGAGATCAACCG...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTCGGTTGATCTCAAGGTaGAACCGCTCCATGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLRLISR*NRSMRS Trigger: GCTCCTCATGGAGCGGTTGCACCTTGAGATCAACCG...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR GCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAAACTCAGGTTCTTCATaGAGAGCCCCTCCTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAENSGSS*RAPPPR Trigger: CCGAGGAGGAGGGGCTCTGCATGAAGAACCTGAGTT...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR GCA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAACTCAGGTTCTTCATaGAGAGCCCCTCCTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGNSGSS*RAPPPR Trigger: CCGAGGAGGAGGGGCTCTGCATGAAGAACCTGAGTT...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGACAAGGCAATCCCCATTaGACGCAAGTCCCCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGQGNPH*TQVPTA Trigger: AGCAGTGGGGACTTGCGTCCAATGGGGATTGCCTTG...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAACAAGGCAATCCCCATTaGACGCAAGTCCCCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAEQGNPH*TQVPTA Trigger: AGCAGTGGGGACTTGCGTCCAATGGGGATTGCCTTG...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTCAAGGCAATCCCCATTaGACGCAAGTCCCCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLQGNPH*TQVPTA Trigger: AGCAGTGGGGACTTGCGTCCAATGGGGATTGCCTTG...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTTACTACGTCTCAAAGTaGGTGGCTCAGGCCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLYYVSK*VAQAGV Trigger: CACTCCGGCCTGAGCCACCCACTTTGAGACGTAGTA...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGTACTACGTCTCAAAGTaGGTGGCTCAGGCCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQYYVSK*VAQAGV Trigger: CACTCCGGCCTGAGCCACCCACTTTGAGACGTAGTA...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGATGTGGAAGGAGCCATaGGAAGTAGGGGGCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQMWKEP*EVGGSV Trigger: GACAGAGCCCCCTACTTCCCATGGCTCCTTCCACAT...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAATGTGGAAGGAGCCATaGGAAGTAGGGGGCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAEMWKEP*EVGGSV Trigger: GACAGAGCCCCCTACTTCCCATGGCTCCTTCCACAT...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTGAAGAGGCCTTGTGCTaGTCAAACACTGTAGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLEEALC*SNTVAR Trigger: CCGTGCTACAGTGTTTGAGCAGCACAAGGCCTCTTC...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR GCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGGAAGAGGCCTTGTGCTaGTCAAACACTGTAGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQEEALC*SNTVAR Trigger: CCGTGCTACAGTGTTTGAGCAGCACAAGGCCTCTTC...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR GCA 90 bp | GTAGTGGCCATAGTGGACACTACCCGAGTGGTTGCAAAGGGCATACAGCTGGTAGGCACCAATCACATCTaGAAAGGCTTCTGTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVAIVDTTRVVAKGIQLVGTNHI*KGFCEF Trigger: GAACTCACAGAAGCCTTTGCAGATGTGATTGGTGCC...TACCAGCTGTATGCCCTTTGCAACCACTCGGGTAGTGTCCACTATGGCCACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTCACTACCCGAGTGGTTaGAAAGGGCATACAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLHYPSG*KGHTAG Trigger: ACCAGCTGTATGCCCTTTGCAACCACTCGGGTAGTG...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 |
||
| CDS-3UTR GCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAACACTACCCGAGTGGTTaGAAAGGGCATACAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAEHYPSG*KGHTAG Trigger: ACCAGCTGTATGCCCTTTGCAACCACTCGGGTAGTG...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTGAGGAAATGGTATCTTaGCTCCCACTCGGGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLEEMVS*LPLGAV Trigger: TACAGCCCCGAGTGGGAGCCAAGATACCATTTCCTC...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGAGGAAATGGTATCTTaGCTCCCACTCGGGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAEEEMVS*LPLGAV Trigger: TACAGCCCCGAGTGGGAGCCAAGATACCATTTCCTC...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCCCCAACACATCCTGAAAGGTGGCAAAGAAAGTCAGGGTGGCAGGTTTTCGAGGAAATGGTATCTTaGCTCCCACTCGGGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IPPTHPERWQRKSGWQVFEEMVS*LPLGAV Trigger: TACAGCCCCGAGTGGGAGCCAAGATACCATTTCCTC...GAAAACCTGCCACCCTGACTTTCTTTGCCACCTTTCAGGATGTGTTGGGGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAACACTGCTCACAGACTTaGAACGGGCTAAGTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAEHCSQT*NGLSWS Trigger: GGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAGTG...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTGAAGGGACGTATTTCTaGAAGACAGCCCGGAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLEGTYF*KTARNR Trigger: CCGATTCCGGGCTGTCTTCCAGAAATACGTCCCTTC...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGAAGGGACGTATTTCTaGAAGACAGCCCGGAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAEEGTYF*KTARNR Trigger: CCGATTCCGGGCTGTCTTCCAGAAATACGTCCCTTC...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTTGGACACTACCCGAGTaGTTGCAAAGGGCATACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLWTLPE*LQRAYS Trigger: GCTGTATGCCCTTTGCAACCACTCGGGTAGTGTCCA...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTCGAGGAGACACTGTATaGGAGATACCTGGGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLRGDTV*EIPGAF Trigger: GAATGCCCCAGGTATCTCCCATACAGTGTCTCCTCG...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTACAGGTCCACAATCTTaGTGTCTTCTCGCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLTGPQS*CLLAPG Trigger: ACCTGGAGCGAGAAGACAGCAAGATTGTGGACCTGT...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR GCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGACAGGTCCACAATCTTaGTGTCTTCTCGCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQTGPQS*CLLAPG Trigger: ACCTGGAGCGAGAAGACAGCAAGATTGTGGACCTGT...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR GCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGTACTTCGGGTTTTCTaGCGACATCGGTCACACACT | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAEVLRVF*RHRSHT Trigger: AGTGTGTGACCGATGTCGGCAGAAAACCCGAAGTAC...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 |
||
| CDS-3UTR GCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGGTACTTCGGGTTTTCTaGCGACATCGGTCACACACT | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQVLRVF*RHRSHT Trigger: AGTGTGTGACCGATGTCGGCAGAAAACCCGAAGTAC...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 |
||
| CDS-3UTR CCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGGCAAAGGTCGTAACATaGAGTTTGGCCCAGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQAKVVT*SLAQEL Trigger: CAGTTCCTGGGCCAAACTCCATGTTACGACCTTTGC...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAGCAAAGGTCGTAACATaGAGTTTGGCCCAGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGAKVVT*SLAQEL Trigger: CAGTTCCTGGGCCAAACTCCATGTTACGACCTTTGC...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTGCAAAGGTCGTAACATaGAGTTTGGCCCAGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLAKVVT*SLAQEL Trigger: CAGTTCCTGGGCCAAACTCCATGTTACGACCTTTGC...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTGGCACCAATCACATCTaGAAAGGCTTCTGTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLGTNHI*KGFCEF Trigger: GAACTCACAGAAGCCTTTGCAGATGTGATTGGTGCC...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CCA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGTCACAGGCACCGAAGTaGTTCCTGCATCAATTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQSQAPK*FLHQLV Trigger: TACCAATTGATGCAGGAACCACTTCGGTGCCTGTGA...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 |
||
| CDS-3UTR CCA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAATCACAGGCACCGAAGTaGTTCCTGCATCAATTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TWSRVWWFLYMGQENKAESQAPK*FLHQLV Trigger: TACCAATTGATGCAGGAACCACTTCGGTGCCTGTGA...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 |
||
| CDS TCA 90 bp | CCCGGGGAGGAAATGGTATCTTGGCTCCCACTCGGGGCTGTACATTaGCAGGTGGCTCTCGAGTCCGGCCCAGGCGGTGCTCAGAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGEEMVSWLPLGAVH*QVALESGPGGAQKP Trigger: AGGCTTCTGAGCACCGCCTGGGCCGGACTCGAGAGCCACCTGTCAATGTACAGCCCCGAGTGGGAGCCAAGATACCATTTCCTCCCCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS GCA 90 bp | CATGGAGTTTGGCCCAGGAACTGGGTTTCGGCGCTCCTTGCTGCGTaGCCGGGGAGGAAATGGTATCTTGGCTCCCACTCGGGGCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: HGVWPRNWVSALLAA*PGRKWYLGSHSGLY Trigger: GTACAGCCCCGAGTGGGAGCCAAGATACCATTTCCTCCCCGGGCACGCAGCAAGGAGCGCCGAAACCCAGTTCCTGGGCCAAACTCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS GCA 90 bp | GTAACATGGAGTTTGGCCCAGGAACTGGGTTTCGGCGCTCCTTGCTaGGTGCCCGGGGAGGAAATGGTATCTTGGCTCCCACTCGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VTWSLAQELGFGAPC*VPGEEMVSWLPLGA Trigger: AGCCCCGAGTGGGAGCCAAGATACCATTTCCTCCCCGGGCACGCAGCAAGGAGCGCCGAAACCCAGTTCCTGGGCCAAACTCCATGTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS GCA 90 bp | GTCGTAACATGGAGTTTGGCCCAGGAACTGGGTTTCGGCGCTCCTTaGTGCGTGCCCGGGGAGGAAATGGTATCTTGGCTCCCACTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VVTWSLAQELGFGAP*CVPGEEMVSWLPLG Trigger: CCCGAGTGGGAGCCAAGATACCATTTCCTCCCCGGGCACGCAGCAAGGAGCGCCGAAACCCAGTTCCTGGGCCAAACTCCATGTTACGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS GCA 90 bp | CACGGTGCCCTCCCAAGGCAATCCCCATTGGACGCAAGTCCCCACTaGTCACAGACTTGGAACGGGCTAAGTTGGTCCGGGATGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HGALPRQSPLDASPH*SQTWNGLSWSGMGE Trigger: CTCTCCCATCCCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAGTGGGGACTTGCGTCCAATGGGGATTGCCTTGGGAGGGCACCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS GCA 90 bp | AAGGCTTCTGTGAGTTCCTGGGCTCGGCCTCCTCCGGGCACCTCTTaGCGGAAGTCCCTTCGCAGACAGAAGTCTCGAAGAGGCCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KASVSSWARPPPGTS*RKSLRRQKSRRGLV Trigger: CACAAGGCCTCTTCGAGACTTCTGTCTGCGAAGGGACTTCCGGCAAGAGGTGCCCGGAGGAGGCCGAGCCCAGGAACTCACAGAAGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 ENSMUST00000174720.2 |
||
| CDS CCA 90 bp | AGGAAATGGTATCTTGGCTCCCACTCGGGGCTGTACATTGACAGGTaGCTCTCGAGTCCGGCCCAGGCGGTGCTCAGAAGCCTGGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RKWYLGSHSGLYIDR*LSSPAQAVLRSLGH Trigger: ATGCCCCAGGCTTCTGAGCACCGCCTGGGCCGGACTCGAGAGCCACCTGTCAATGTACAGCCCCGAGTGGGAGCCAAGATACCATTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS CCA 90 bp | AGGAACTGGGTTTCGGCGCTCCTTGCTGCGTGCCCGGGGAGGAAATaGTATCTTGGCTCCCACTCGGGGCTGTACATTGACAGGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RNWVSALLAACPGRK*YLGSHSGLYIDRWL Trigger: GAGCCACCTGTCAATGTACAGCCCCGAGTGGGAGCCAAGATACCATTTCCTCCCCGGGCACGCAGCAAGGAGCGCCGAAACCCAGTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS CCA 90 bp | GCCTTTCATCTGGGGGACCTGGCCTGGGAGGCAAAGGTCGTAACATaGAGTTTGGCCCAGGAACTGGGTTTCGGCGCTCCTTGCTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: AFHLGDLAWEAKVVT*SLAQELGFGAPCCV Trigger: CACGCAGCAAGGAGCGCCGAAACCCAGTTCCTGGGCCAAACTCCATGTTACGACCTTTGCCTCCCAGGCCAGGTCCCCCAGATGAAAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | GTAGTGGCCATAGTGGACACTACCCGAGTGGTTGCAAAGGGCATACAGCTGGTAGGGTTTCGGCGCTCCTaGCTGCGTGCCCGGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VVAIVDTTRVVAKGIQLVGFRRS*LRARGG Trigger: TCCTCCCCGGGCACGCAGCAAGGAGCGCCGAAACCC...TACCAGCTGTATGCCCTTTGCAACCACTCGGGTAGTGTCCACTATGGCCACTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
||
| CDS CCA 90 bp | CCAAGGCAATCCCCATTGGACGCAAGTCCCCACTGCTCACAGACTTaGAACGGGCTAAGTTGGTCCGGGATGGGAGAGGCAGAGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PRQSPLDASPHCSQT*NGLSWSGMGEAEPQ Trigger: CTGTGGCTCTGCCTCTCCCATCCCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAGTGGGGACTTGCGTCCAATGGGGATTGCCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTGGGTTTCGGCGCTCCTaGCTGCGTGCCCGGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLGFRRS*LRARGG Trigger: TCCTCCCCGGGCACGCAGCAAGGAGCGCCGAAACCC...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS GCA 90 bp | ACAGCCCGGAATCGGGTGGGATTCACAGCTTCACAGGAGTCAGGGTaGCAGAGGGCACCAATCACATCTGCAAAGGCTTCTGTGAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TARNRVGFTASQESG*QRAPITSAKASVSS Trigger: GGAACTCACAGAAGCCTTTGCAGATGTGATTGGTGCCCTCTGGCACCCTGACTCCTGTGAAGCTGTGAATCCCACCCGATTCCGGGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 ENSMUST00000174720.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCTGGTAGACAGGGCTTCCCTCCATTCCCCCAACACATCCTGAAAGGTGGCCCACTGCTCACAGACTaGGAACGGGCTAAGTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TAGRQGFPPFPQHILKGGPLLTD*ERAKLV Trigger: GACCAACTTAGCCCGTTCCAAGTCTGTGAGCAGTGG...GCCACCTTTCAGGATGTGTTGGGGGAATGGAGGGAAGCCCTGTCTACCAGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGTCCTCCGGGCACCTCTaGCCGGAAGTCCCTTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQSSGHL*PEVPSQ Trigger: CTGCGAAGGGACTTCCGGCAAGAGGTGCCCGGAGGA...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTTCCTCCGGGCACCTCTaGCCGGAAGTCCCTTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLSSGHL*PEVPSQ Trigger: CTGCGAAGGGACTTCCGGCAAGAGGTGCCCGGAGGA...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCTGGTAGACAGGGCTTCCCTCCATTCCCCCAACACATCCTGAAAGGTGGCGTCGTAACATGGAGTTaGGCCCAGGAACTGGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TAGRQGFPPFPQHILKGGVVTWS*AQELGF Trigger: GAAACCCAGTTCCTGGGCCAAACTCCATGTTACGAC...GCCACCTTTCAGGATGTGTTGGGGGAATGGAGGGAAGCCCTGTCTACCAGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGATTGGAACGGGCTAAGTaGGTCCGGGATGGGAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGLERAK*VRDGRG Trigger: GCCTCTCCCATCCCGGACCAACTTAGCCCGTTCCAA...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAATTGGAACGGGCTAAGTaGGTCCGGGATGGGAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TWSRVWWFLYMGQENKAELERAK*VRDGRG Trigger: GCCTCTCCCATCCCGGACCAACTTAGCCCGTTCCAA...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAACCAAGGCAATCCCCATaGGACGCAAGTCCCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: TWSRVWWFLYMGQENKAEPRQSP*DASPHC Trigger: GCAGTGGGGACTTGCGTCCAATGGGGATTGCCTTGG...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGACCAAGGCAATCCCCATaGGACGCAAGTCCCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGPRQSP*DASPHC Trigger: GCAGTGGGGACTTGCGTCCAATGGGGATTGCCTTGG...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGACAGGGCTTCCCGCTTaGTCGCTGGCAAAGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQTGLPA*SLAKSP Trigger: AGGGGACTTTGCCAGCGACAAAGCGGGAAGCCCTGT...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTACAGGGCTTCCCGCTTaGTCGCTGGCAAAGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLTGLPA*SLAKSP Trigger: AGGGGACTTTGCCAGCGACAAAGCGGGAAGCCCTGT...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 |
||
| CDS-3UTR CAA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGACTCGGGGCTGTACATaGACAGGTGGCTCTCGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQTRGCT*TGGSRV Trigger: GACTCGAGAGCCACCTGTCAATGTACAGCCCCGAGT...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAACTCGGGGCTGTACATaGACAGGTGGCTCTCGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TWSRVWWFLYMGQENKAETRGCT*TGGSRV Trigger: GACTCGAGAGCCACCTGTCAATGTACAGCCCCGAGT...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | ATTCCCCCAACACATCCTGAAAGGTGGCAAAGAAAGTCAGGGTGGCAGGTTTTCACTCGGGGCTGTACATaGACAGGTGGCTCTCGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: IPPTHPERWQRKSGWQVFTRGCT*TGGSRV Trigger: GACTCGAGAGCCACCTGTCAATGTACAGCCCCGAGT...GAAAACCTGCCACCCTGACTTTCTTTGCCACCTTTCAGGATGTGTTGGGGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTGGAGGAAATGGTATCTaGGCTCCCACTCGGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLGGNGI*APTRGC Trigger: ACAGCCCCGAGTGGGAGCCAAGATACCATTTCCTCC...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGGGAGGAAATGGTATCTaGGCTCCCACTCGGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQGGNGI*APTRGC Trigger: ACAGCCCCGAGTGGGAGCCAAGATACCATTTCCTCC...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS GCA 90 bp | GCCGGAAGTCCCTTCGCAGACAGAAGTCTCGAAGAGGCCTTGTGCTaGTCAAACACTGTAGCACGGCATTCAGGAAGCATGTATTTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: AGSPFADRSLEEALC*SNTVARHSGSMYFL Trigger: TAGGAAATACATGCTTCCTGAATGCCGTGCTACAGTGTTTGAGCAGCACAAGGCCTCTTCGAGACTTCTGTCTGCGAAGGGACTTCCGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 ENSMUST00000174720.2 |
||
| CDS-3UTR CAA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAACCCAGCTCCAGTTTCTaGAGCCTTTCATCTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TWSRVWWFLYMGQENKAEPSSSF*SLSSGG Trigger: TCCCCCAGATGAAAGGCTCAAGAAACTGGAGCTGGG...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTCCCAGCTCCAGTTTCTaGAGCCTTTCATCTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLPSSSF*SLSSGG Trigger: TCCCCCAGATGAAAGGCTCAAGAAACTGGAGCTGGG...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | ATTCCCCCAACACATCCTGAAAGGTGGCAAAGAAAGTCAGGGTGGCAGGTTTTCCCCAGCTCCAGTTTCTaGAGCCTTTCATCTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: IPPTHPERWQRKSGWQVFPSSSF*SLSSGG Trigger: TCCCCCAGATGAAAGGCTCAAGAAACTGGAGCTGGG...GAAAACCTGCCACCCTGACTTTCTTTGCCACCTTTCAGGATGTGTTGGGGGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTCCACTGCTCACAGACTaGGAACGGGCTAAGTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLPLLTD*ERAKLV Trigger: GACCAACTTAGCCCGTTCCAAGTCTGTGAGCAGTGG...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTACACTACCCGAGTGGTaGCAAAGGGCATACAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLTLPEW*QRAYSW Trigger: CCAGCTGTATGCCCTTTGCAACCACTCGGGTAGTGT...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 |
||
| CDS-3UTR CAA 90 bp | TACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAGTCGTAACATGGAGTTaGGCCCAGGAACTGGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YMVKGLVVSVHGTGKQGGVVTWS*AQELGF Trigger: GAAACCCAGTTCCTGGGCCAAACTCCATGTTACGAC...TCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGTCGTAACATGGAGTTaGGCCCAGGAACTGGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TWSRVWWFLYMGQENKAEVVTWS*AQELGF Trigger: GAAACCCAGTTCCTGGGCCAAACTCCATGTTACGAC...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGAACAGGTCCACAATCTaGCTGTCTTCTCGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQNRSTI*LSSRSR Trigger: CCTGGAGCGAGAAGACAGCAAGATTGTGGACCTGTT...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAGGGTACTTCTTAACAGGTCCACAATCTaGCTGTCTTCTCGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLVVSVHGTGKQGGRVLLNRSTI*LSSRSR Trigger: CCTGGAGCGAGAAGACAGCAAGATTGTGGACCTGTT...AAGAAGTACCCTTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAAAACAGGTCCACAATCTaGCTGTCTTCTCGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TWSRVWWFLYMGQENKAENRSTI*LSSRSR Trigger: CCTGGAGCGAGAAGACAGCAAGATTGTGGACCTGTT...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGAGTCTCGAAGAGGCCTaGTGCTGCTCAAACACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQSLEEA*CCSNTV Trigger: TACAGTGTTTGAGCAGCACAAGGCCTCTTCGAGACT...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS-3UTR CAA 90 bp | ACATGGTCAAGGGTCTGGTGGTTTCTGTACATGGGACAGGAAAACAAGGCGGAATGGTTCCTGCATCAATaGGTAGAACAGCACGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TWSRVWWFLYMGQENKAEWFLHQ*VEQHVA Trigger: GGCTACGTGCTGTTCTACCAATTGATGCAGGAACCA...TTCCGCCTTGTTTTCCTGTCCCATGTACAGAAACCACCAGACCCTTGACCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 |
||
| CDS-3UTR CAA 90 bp | ATAGACGTCTGTGAGGTAACTGGGGGCTTAAGGGTGTTGGGAAGGTTTTCACAGTGGTTCCTGCATCAATaGGTAGAACAGCACGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IDVCEVTGGLRVLGRFSQWFLHQ*VEQHVA Trigger: GGCTACGTGCTGTTCTACCAATTGATGCAGGAACCA...CTGTGAAAACCTTCCCAACACCCTTAAGCCCCCAGTTACCTCACAGACGTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 |
||
| CDS CCA 72 bp | CTCCTCCTCGGCAAGGTGGAGAGGGAACTGGTCCGCTaGCCAAGATTGGCGGTGCCCGGCGCCCTCGTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLLGKVERELVR*PRLAVPGALVG Trigger: ACCGACGAGGGCGCCGGGCACCGCCAATCTTGGCCAGCGGACCAGTTCCCTCTCCACCTTGCCGAGGAGGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS GCA 72 bp | CGGCTCAGTGCAGCCCCTAGCTCGCCAGCGCCACGGTaGCCTCCCAAGGCAATCCCCATTGGACGCAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLSAAPSSPAPR*PPKAIPIGRKS Trigger: GGACTTGCGTCCAATGGGGATTGCCTTGGGAGGGCACCGTGGCGCTGGCGAGCTAGGGGCTGCACTGAGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS CAA 90 bp | GCCCGGGGAGGAAATGGTATCTTGGCTCCCACTCGGGGCTGTACATaGACAGGTGGCTCTCGAGTCCGGCCCAGGCGGTGCTCAGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARGGNGILAPTRGCT*TGGSRVRPRRCSEA Trigger: GGCTTCTGAGCACCGCCTGGGCCGGACTCGAGAGCCACCTGTCAATGTACAGCCCCGAGTGGGAGCCAAGATACCATTTCCTCCCCGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS CAA 90 bp | CATCTGGGGGACCTGGCCTGGGAGGCAAAGGTCGTAACATGGAGTTaGGCCCAGGAACTGGGTTTCGGCGCTCCTTGCTGCGTGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: HLGDLAWEAKVVTWS*AQELGFGAPCCVPG Trigger: CCCGGGCACGCAGCAAGGAGCGCCGAAACCCAGTTCCTGGGCCAAACTCCATGTTACGACCTTTGCCTCCCAGGCCAGGTCCCCCAGATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS GCA 72 bp | TGGCCCAGGAACTGGGTTTCGGCGCTCCTTGCTGCGTaGCCGGGGAGGAAATGGTATCTTGGCTCCCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: WPRNWVSALLAA*PGRKWYLGSHS Trigger: CGAGTGGGAGCCAAGATACCATTTCCTCCCCGGGCACGCAGCAAGGAGCGCCGAAACCCAGTTCCTGGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS GCA 72 bp | TGGAGAGGGAACTGGTCCGCTGGCCAAGATTGGCGGTaGCCGGCGCCCTCGTCGGTTGATCTCAAGGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: WRGNWSAGQDWR*PAPSSVDLKVQ Trigger: TTGCACCTTGAGATCAACCGACGAGGGCGCCGGGCACCGCCAATCTTGGCCAGCGGACCAGTTCCCTCTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS CCA 72 bp | GCCAGCGCCACGGTGCCCTCCCAAGGCAATCCCCATTaGACGCAAGTCCCCACTGCTCACAGACTTGGAACG | + |
|
Preference number: 6 (lower is better) Translates to: ASATVPSQGNPH*TQVPTAHRLGT Trigger: CGTTCCAAGTCTGTGAGCAGTGGGGACTTGCGTCCAATGGGGATTGCCTTGGGAGGGCACCGTGGCGCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS CAA 72 bp | CGCCAGCGCCACGGTGCCCTCCCAAGGCAATCCCCATaGGACGCAAGTCCCCACTGCTCACAGACTTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RQRHGALPRQSP*DASPHCSQTWN Trigger: GTTCCAAGTCTGTGAGCAGTGGGGACTTGCGTCCAATGGGGATTGCCTTGGGAGGGCACCGTGGCGCTGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS CAA 72 bp | CTGGCCAAGATTGGCGGTGCCCGGCGCCCTCGTCGGTaGATCTCAAGGTGCAACCGCTCCATGAGGAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LAKIGGARRPRR*ISRCNRSMRSF Trigger: GAAGCTCCTCATGGAGCGGTTGCACCTTGAGATCAACCGACGAGGGCGCCGGGCACCGCCAATCTTGGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS CAA 90 bp | GGGTTTCGGCGCTCCTTGCTGCGTGCCCGGGGAGGAAATGGTATCTaGGCTCCCACTCGGGGCTGTACATTGACAGGTGGCTCTCGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GFRRSLLRARGGNGI*APTRGCTLTGGSRV Trigger: GACTCGAGAGCCACCTGTCAATGTACAGCCCCGAGTGGGAGCCAAGATACCATTTCCTCCCCGGGCACGCAGCAAGGAGCGCCGAAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS CAA 90 bp | ACTGGTCCGCTGGCCAAGATTGGCGGTGCCCGGCGCCCTCGTCGGTaGATCTCAAGGTGCAACCGCTCCATGAGGAGCTTCAGGAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: TGPLAKIGGARRPRR*ISRCNRSMRSFRNS Trigger: AGAGTTCCTGAAGCTCCTCATGGAGCGGTTGCACCTTGAGATCAACCGACGAGGGCGCCGGGCACCGCCAATCTTGGCCAGCGGACCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS GCA 72 bp | GTGAGTTCCTGGGCTCGGCCTCCTCCGGGCACCTCTTaGCGGAAGTCCCTTCGCAGACAGAAGTCTCGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VSSWARPPPGTS*RKSLRRQKSRR Trigger: TCTTCGAGACTTCTGTCTGCGAAGGGACTTCCGGCAAGAGGTGCCCGGAGGAGGCCGAGCCCAGGAACTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 ENSMUST00000174720.2 |
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| CDS CCA 72 bp | TATCTTGGCTCCCACTCGGGGCTGTACATTGACAGGTaGCTCTCGAGTCCGGCCCAGGCGGTGCTCAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: YLGSHSGLYIDR*LSSPAQAVLRS Trigger: GCTTCTGAGCACCGCCTGGGCCGGACTCGAGAGCCACCTGTCAATGTACAGCCCCGAGTGGGAGCCAAGATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS CCA 72 bp | CTGGGGGACCTGGCCTGGGAGGCAAAGGTCGTAACATaGAGTTTGGCCCAGGAACTGGGTTTCGGCGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LGDLAWEAKVVT*SLAQELGFGAP Trigger: AGGAGCGCCGAAACCCAGTTCCTGGGCCAAACTCCATGTTACGACCTTTGCCTCCCAGGCCAGGTCCCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS CCA 72 bp | CCCCAAGACGCCGGAGAGAAGTACTACGTCTCAAAGTaGGTGGCTCAGGCCGGAGTGCCAAGCGGCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PQDAGEKYYVSK*VAQAGVPSGSV Trigger: CACTGAGCCGCTTGGCACTCCGGCCTGAGCCACCCACTTTGAGACGTAGTACTTCTCTCCGGCGTCTTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS CCA 72 bp | AGGTTCTTCATGCAGAGCCCCTCCTCCTCGGCAAGGTaGAGAGGGAACTGGTCCGCTGGCCAAGATTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RFFMQSPSSSAR*RGNWSAGQDWR Trigger: CCGCCAATCTTGGCCAGCGGACCAGTTCCCTCTCCACCTTGCCGAGGAGGAGGGGCTCTGCATGAAGAACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS CAA 72 bp | GGAAATGGTATCTTGGCTCCCACTCGGGGCTGTACATaGACAGGTGGCTCTCGAGTCCGGCCCAGGCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GNGILAPTRGCT*TGGSRVRPRRC Trigger: GCACCGCCTGGGCCGGACTCGAGAGCCACCTGTCAATGTACAGCCCCGAGTGGGAGCCAAGATACCATTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS CAA 72 bp | CGCTCCTTGCTGCGTGCCCGGGGAGGAAATGGTATCTaGGCTCCCACTCGGGGCTGTACATTGACAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSLLRARGGNGI*APTRGCTLTGG Trigger: GCCACCTGTCAATGTACAGCCCCGAGTGGGAGCCAAGATACCATTTCCTCCCCGGGCACGCAGCAAGGAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS CAA 72 bp | TGTGAGTTCCTGGGCTCGGCCTCCTCCGGGCACCTCTaGCCGGAAGTCCCTTCGCAGACAGAAGTCTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CEFLGSASSGHL*PEVPSQTEVSK Trigger: CTTCGAGACTTCTGTCTGCGAAGGGACTTCCGGCAAGAGGTGCCCGGAGGAGGCCGAGCCCAGGAACTCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 ENSMUST00000174720.2 |
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| CDS CAA 90 bp | GGTCGTAACATGGAGTTTGGCCCAGGAACTGGGTTTCGGCGCTCCTaGCTGCGTGCCCGGGGAGGAAATGGTATCTTGGCTCCCACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GRNMEFGPGTGFRRS*LRARGGNGILAPTR Trigger: CCGAGTGGGAGCCAAGATACCATTTCCTCCCCGGGCACGCAGCAAGGAGCGCCGAAACCCAGTTCCTGGGCCAAACTCCATGTTACGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS TCA 72 bp | GAAATGGTATCTTGGCTCCCACTCGGGGCTGTACATTaGCAGGTGGCTCTCGAGTCCGGCCCAGGCGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EMVSWLPLGAVH*QVALESGPGGA Trigger: AGCACCGCCTGGGCCGGACTCGAGAGCCACCTGTCAATGTACAGCCCCGAGTGGGAGCCAAGATACCATTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS GCA 72 bp | TGGAGTTTGGCCCAGGAACTGGGTTTCGGCGCTCCTTaGTGCGTGCCCGGGGAGGAAATGGTATCTTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WSLAQELGFGAP*CVPGEEMVSWL Trigger: GAGCCAAGATACCATTTCCTCCCCGGGCACGCAGCAAGGAGCGCCGAAACCCAGTTCCTGGGCCAAACTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS CCA 72 bp | GTTTCGGCGCTCCTTGCTGCGTGCCCGGGGAGGAAATaGTATCTTGGCTCCCACTCGGGGCTGTACATTGAC | + |
|
Preference number: 6 (lower is better) Translates to: VSALLAACPGRK*YLGSHSGLYID Trigger: GTCAATGTACAGCCCCGAGTGGGAGCCAAGATACCATTTCCTCCCCGGGCACGCAGCAAGGAGCGCCGAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS CAA 72 bp | GACCTGGCCTGGGAGGCAAAGGTCGTAACATGGAGTTaGGCCCAGGAACTGGGTTTCGGCGCTCCTTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DLAWEAKVVTWS*AQELGFGAPCC Trigger: GCAGCAAGGAGCGCCGAAACCCAGTTCCTGGGCCAAACTCCATGTTACGACCTTTGCCTCCCAGGCCAGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
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| CDS CAA 90 bp | CCCAAGGCAATCCCCATTGGACGCAAGTCCCCACTGCTCACAGACTaGGAACGGGCTAAGTTGGTCCGGGATGGGAGAGGCAGAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: PKAIPIGRKSPLLTD*ERAKLVRDGRGRAT Trigger: TGTGGCTCTGCCTCTCCCATCCCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAGTGGGGACTTGCGTCCAATGGGGATTGCCTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS CAA 90 bp | AAAGGCTTCTGTGAGTTCCTGGGCTCGGCCTCCTCCGGGCACCTCTaGCCGGAAGTCCCTTCGCAGACAGAAGTCTCGAAGAGGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: KGFCEFLGSASSGHL*PEVPSQTEVSKRPC Trigger: ACAAGGCCTCTTCGAGACTTCTGTCTGCGAAGGGACTTCCGGCAAGAGGTGCCCGGAGGAGGCCGAGCCCAGGAACTCACAGAAGCCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 ENSMUST00000174720.2 |
||
| CDS GCA 72 bp | CTCCCAAGGCAATCCCCATTGGACGCAAGTCCCCACTaGTCACAGACTTGGAACGGGCTAAGTTGGTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: LPRQSPLDASPH*SQTWNGLSWSG Trigger: CCCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAGTGGGGACTTGCGTCCAATGGGGATTGCCTTGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS CCA 72 bp | TCCCCATTGGACGCAAGTCCCCACTGCTCACAGACTTaGAACGGGCTAAGTTGGTCCGGGATGGGAGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPLDASPHCSQT*NGLSWSGMGEA Trigger: TGCCTCTCCCATCCCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAGTGGGGACTTGCGTCCAATGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS CAA 72 bp | ATGGAGTTTGGCCCAGGAACTGGGTTTCGGCGCTCCTaGCTGCGTGCCCGGGGAGGAAATGGTATCTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: MEFGPGTGFRRS*LRARGGNGILA Trigger: AGCCAAGATACCATTTCCTCCCCGGGCACGCAGCAAGGAGCGCCGAAACCCAGTTCCTGGGCCAAACTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS CAA 72 bp | ATCCCCATTGGACGCAAGTCCCCACTGCTCACAGACTaGGAACGGGCTAAGTTGGTCCGGGATGGGAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: IPIGRKSPLLTD*ERAKLVRDGRG Trigger: GCCTCTCCCATCCCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAGTGGGGACTTGCGTCCAATGGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS CCA 72 bp | TCAGAAGGCCGGGCAGATATCATGTGGAAGGAGCCATaGGAAGTAGGGGGCTCTGTCCGTATGCTGAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SEGRADIMWKEP*EVGGSVRMLSR Trigger: CCTGCTCAGCATACGGACAGAGCCCCCTACTTCCCATGGCTCCTTCCACATGATATCTGCCCGGCCTTCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 |
||
| CDS GCA 72 bp | CCCTTCGCAGACAGAAGTCTCGAAGAGGCCTTGTGCTaGTCAAACACTGTAGCACGGCATTCAGGAAGCATG | + |
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Preference number: 6 (lower is better) Translates to: PFADRSLEEALC*SNTVARHSGSM Trigger: CATGCTTCCTGAATGCCGTGCTACAGTGTTTGAGCAGCACAAGGCCTCTTCGAGACTTCTGTCTGCGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 ENSMUST00000174720.2 |
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| CDS GCA 72 bp | AATCGGGTGGGATTCACAGCTTCACAGGAGTCAGGGTaGCAGAGGGCACCAATCACATCTGCAAAGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: NRVGFTASQESG*QRAPITSAKAS Trigger: AGAAGCCTTTGCAGATGTGATTGGTGCCCTCTGGCACCCTGACTCCTGTGAAGCTGTGAATCCCACCCGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 ENSMUST00000174720.2 |
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| CDS CAA 72 bp | GGAAGTCCCTTCGCAGACAGAAGTCTCGAAGAGGCCTaGTGCTGCTCAAACACTGTAGCACGGCATTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: GSPFADRSLEEA*CCSNTVARHSG Trigger: TCCTGAATGCCGTGCTACAGTGTTTGAGCAGCACAAGGCCTCTTCGAGACTTCTGTCTGCGAAGGGACTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 ENSMUST00000174720.2 |
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| CDS CAA 90 bp | CCTCTTGCCGGAAGTCCCTTCGCAGACAGAAGTCTCGAAGAGGCCTaGTGCTGCTCAAACACTGTAGCACGGCATTCAGGAAGCATGTAT | + |
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Preference number: 6 (lower is better) Translates to: PLAGSPFADRSLEEA*CCSNTVARHSGSMY Trigger: ATACATGCTTCCTGAATGCCGTGCTACAGTGTTTGAGCAGCACAAGGCCTCTTCGAGACTTCTGTCTGCGAAGGGACTTCCGGCAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065941.12 ENSMUST00000111305.8 ENSMUST00000149187.8 ENSMUST00000174720.2 |
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