Pregenerated sensors for USP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032010Ensembl transcript IDs: ENSMUST00000034508.14, ENSMUST00000065461.9, ENSMUST00000114830.9, ENSMUST00000175816.2, ENSMUST00000176416.8, ENSMUST00000176671.2, ENSMUST00000177054.8
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCGCATCAGTCCGTCTTCCTGCCAGGCCGTGCGTGTGCATGCGTaGCGCAGGGGCACATGGCTCCTCACTCCAGACCCTGACCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: LRISPSSCQAVRVHA*RRGTWLLTPDPDQA Trigger: AGCCTGGTCAGGGTCTGGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAGGAAGACGGACTGATGCGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
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| 3UTR CCA 90 bp | TCTTCCTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATaGCTCCTCACTCCAGACCCTGACCAGGCTGTATCAACTTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: SSCQAVRVHAWRRGT*LLTPDPDQAVSTSA Trigger: AGCAGAAGTTGATACAGCCTGGTCAGGGTCTGGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAGGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
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| 3UTR CCA 90 bp | AGATGGCGCTGTCCTCCCAGCAGGTGTGGCACTGGGGGCAGCAGGTaGGCTGACGGTCCTCTCCCACAGACCGCTCTTGTTTTTATTACA | + |
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Preference number: 1 (lower is better) Translates to: RWRCPPSRCGTGGSR*ADGPLPQTALVFIT Trigger: TGTAATAAAAACAAGAGCGGTCTGTGGGAGAGGACCGTCAGCCCACCTGCTGCCCCCAGTGCCACACCTGCTGGGAGGACAGCGCCATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
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| 3UTR CCA 90 bp | ATCTGTACCCCTGGACTTAGCAGCGTTAAGAGGGCTCTTGGCTCATaGGCGTTTCCTCTCTGGACTGGTGAGCAGGTCCAGGCAGGACGG | + |
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Preference number: 1 (lower is better) Translates to: ICTPGLSSVKRALGS*AFPLWTGEQVQAGR Trigger: CCGTCCTGCCTGGACCTGCTCACCAGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCTCTTAACGCTGCTAAGTCCAGGGGTACAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
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| 3UTR TCA 90 bp | AGATACTTCCTCCACATCTGTCGCCCCTTTTCTTCATCAGGGAGATaGTCAAGGGTCTCAGGGCTGGCCTTAGGCCTTGCTGCCACCCGG | + |
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Preference number: 1 (lower is better) Translates to: RYFLHICRPFSSSGR*SRVSGLALGLAATR Trigger: CCGGGTGGCAGCAAGGCCTAAGGCCAGCCCTGAGACCCTTGATCATCTCCCTGATGAAGAAAAGGGGCGACAGATGTGGAGGAAGTATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR GCA 90 bp | ATCAGGGAGATGATCAAGGGTCTCAGGGCTGGCCTTAGGCCTTGCTaGCACCCGGTTCACCTCATTGTGGAGACCATCCAGAAGGAAACG | + |
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Preference number: 1 (lower is better) Translates to: IREMIKGLRAGLRPC*HPVHLIVETIQKET Trigger: CGTTTCCTTCTGGATGGTCTCCACAATGAGGTGAACCGGGTGGCAGCAAGGCCTAAGGCCAGCCCTGAGACCCTTGATCATCTCCCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR TCA 90 bp | TGTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCAGACCCTaGCCAGGCTGTATCAACTTCTGCTCGGCAGCTTTATTTTACTTT | + |
|
Preference number: 1 (lower is better) Translates to: CACVAQGHMAPHSRP*PGCINFCSAALFYF Trigger: AAAGTAAAATAAAGCTGCCGAGCAGAAGTTGATACAGCCTGGTCAGGGTCTGGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
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| 3UTR TCA 90 bp | CAAAGACTGATGCCAAGATGGGGTAAGGGGTGGTGTGGGTGTCCCTaGGAAGCTCAGTCCAGAGGGCCTTTGTCTAAGAGACTCTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: QRLMPRWGKGWCGCP*EAQSRGPLSKRLWE Trigger: TTCCCAGAGTCTCTTAGACAAAGGCCCTCTGGACTGAGCTTCTCAGGGACACCCACACCACCCCTTACCCCATCTTGGCATCAGTCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
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| 3UTR GCA 90 bp | GAGAAGGGTATCAGGCCAGGTAAACTCAGGGTGTCTTTTCTTGGGTaGCCTGTCCTGGGACACTCAAGCACTCGAGGTTCTGAGGGCATA | + |
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Preference number: 1 (lower is better) Translates to: EKGIRPGKLRVSFLG*PVLGHSSTRGSEGI Trigger: TATGCCCTCAGAACCTCGAGTGCTTGAGTGTCCCAGGACAGGGCACCCAAGAAAAGACACCCTGAGTTTACCTGGCCTGATACCCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
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| 3UTR TCA 90 bp | AGGAGCCTGTGCTGTCCTTCAAACAGCTGGGGAGACCGGGGTGGGTaGGAGGGTGGTAGGAAGAGCTTGATACACTATCTTAAGAATCAC | + |
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Preference number: 1 (lower is better) Translates to: RSLCCPSNSWGDRGG*EGGRKSLIHYLKNH Trigger: GTGATTCTTAAGATAGTGTATCAAGCTCTTCCTACCACCCTCTCACCCACCCCGGTCTCCCCAGCTGTTTGAAGGACAGCACAGGCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
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| 3UTR CCA 90 bp | TCAAAGCAGAGTAACTTTAGATCCCAGGTCTACTGTGACGATGCTTaGGCCCAGCCAACACTCACCCAGCACACGGGGACTAGCATTAGG | + |
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Preference number: 1 (lower is better) Translates to: SKQSNFRSQVYCDDA*AQPTLTQHTGTSIR Trigger: CCTAATGCTAGTCCCCGTGTGCTGGGTGAGTGTTGGCTGGGCCCAAGCATCGTCACAGTAGACCTGGGATCTAAAGTTACTCTGCTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
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| 3UTR CCA 90 bp | CATGAAGCGTGGCGCATATCTCTGGATCTGGGTCTTGAACTCAGATaGGCTCACCACATCATTGGGGGACGACGTCCATATGGTCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: HEAWRISLDLGLELR*AHHIIGGRRPYGLD Trigger: ATCCAGACCATATGGACGTCGTCCCCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAGATATGCGCCACGCTTCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR TCA 90 bp | GGCAGCAAGTTGGCTTCTCATCACCATCCAATATGTCCTCTTTGGTaGAGAGCCTCATACAATCCATTAACGTCACCTCAGGGTAACCTC | + |
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Preference number: 1 (lower is better) Translates to: GSKLASHHHPICPLW*RASYNPLTSPQGNL Trigger: GAGGTTACCCTGAGGTGACGTTAATGGATTGTATGAGGCTCTTCACCAAAGAGGACATATTGGATGGTGATGAGAAGCCAACTTGCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR CCA 90 bp | ACATTCTACTCTTGCTTACATAGTAAACAAGTGTACACCAGCCCTTaGGCTCATGTTCACAGGTCTTCCCTAGAGAAGGGTATCAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: TFYSCLHSKQVYTSP*AHVHRSSLEKGIRP Trigger: TGGCCTGATACCCTTCTCTAGGGAAGACCTGTGAACATGAGCCCAAGGGCTGGTGTACACTTGTTTACTATGTAAGCAAGAGTAGAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
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| 3UTR-3UTR CCA 90 bp | GGTGTGGGTGTCCCTGAGAAGCTCAGTCCAGAGGGCCTTTGTCTAAGAGACTCTTCCTCCCAGCAGGTGTaGCACTGGGGGCAGCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GVGVPEKLSPEGLCLRDSSSQQV*HWGQQV Trigger: CACCTGCTGCCCCCAGTGCCACACCTGCTGGGAGGA...AGAGTCTCTTAGACAAAGGCCCTCTGGACTGAGCTTCTCAGGGACACCCACACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
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| 3UTR-3UTR CCA 90 bp | CTCTTTGCGATGGGCAACGAGAGATCCCAGAAGGGATCGAAGACTGTAGAGCAGCCGTGTGAGCGCTGCTaGTGTGGCCGAGGTCCCGCA | + |
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Preference number: 2 (lower is better) Translates to: LFAMGNERSQKGSKTVEQPCERC*CGRGPA Trigger: TGCGGGACCTCGGCCACACCAGCAGCGCTCACACGG...CTGCTCTACAGTCTTCGATCCCTTCTGGGATCTCTCGTTGCCCATCGCAAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR CAA 90 bp | TCACCCTCATCTGTACCCCTGGACTTAGCAGCGTTAAGAGGGCTCTaGGCTCATGGGCGTTTCCTCTCTGGACTGGTGAGCAGGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SPSSVPLDLAALRGL*AHGRFLSGLVSRSR Trigger: CCTGGACCTGCTCACCAGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCTCTTAACGCTGCTAAGTCCAGGGGTACAGATGAGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
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| 3UTR-3UTR GCA 90 bp | TCACCTCAGGGTAACCTCTCTTTGCGATGGGCAACGAGAGATCCCAGAAGGGATGCTGGCCTTAGGCCTTaGTGCCACCCGGTTCACCTC | + |
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Preference number: 2 (lower is better) Translates to: SPQGNLSLRWATRDPRRDAGLRP*CHPVHL Trigger: GAGGTGAACCGGGTGGCAGCAAGGCCTAAGGCCAGC...ATCCCTTCTGGGATCTCTCGTTGCCCATCGCAAAGAGAGGTTACCCTGAGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTGTGGGTGTCCCTGAGAAGCTCAGTCCAGAGGGCCTTTGTCTAAGAGACTGGGAAAGGGACAGGTaGCAGGAAGCTTGGGGGATA | + |
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Preference number: 2 (lower is better) Translates to: GGVGVPEKLSPEGLCLRDWERDR*QEAWGI Trigger: TATCCCCCAAGCTTCCTGCCACCTGTCCCTTTCCCA...GTCTCTTAGACAAAGGCCCTCTGGACTGAGCTTCTCAGGGACACCCACACCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
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| 3UTR-3UTR CCA 90 bp | GGTGCATGTGAGGGAGCTCTTCAGCTGCCCAACGAAGAGATCCCCAATCCGACTGGTCTTGAACTCAGATaGGCTCACCACATCATTGGG | + |
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Preference number: 2 (lower is better) Translates to: GACEGALQLPNEEIPNPTGLELR*AHHIIG Trigger: CCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACC...AGTCGGATTGGGGATCTCTTCGTTGGGCAGCTGAAGAGCTCCCTCACATGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCACATCTGTCGCCCCTTTTCTTCATCAGGGAGATGATCAAGGGTCTCAGTCTGGATCTGGGTCTTaGACTCAGATGGGCTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: SSTSVAPFLHQGDDQGSQSGSGS*TQMGSP Trigger: TGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGA...CTGAGACCCTTGATCATCTCCCTGATGAAGAAAAGGGGCGACAGATGTGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR-3UTR CCA 90 bp | TCACCTCAGGGTAACCTCTCTTTGCGATGGGCAACGAGAGATCCCAGAAGGGATGCATATCTCTGGATCTaGGTCTTGAACTCAGATGGG | + |
|
Preference number: 2 (lower is better) Translates to: SPQGNLSLRWATRDPRRDAYLWI*VLNSDG Trigger: CCCATCTGAGTTCAAGACCCAGATCCAGAGATATGC...ATCCCTTCTGGGATCTCTCGTTGCCCATCGCAAAGAGAGGTTACCCTGAGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR-3UTR CCA 90 bp | TCACCTCAGGGTAACCTCTCTTTGCGATGGGCAACGAGAGATCCCAGAAGGGATGACGTCCATATGGTCTaGATTAGTTTTGCAAACTCT | + |
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Preference number: 2 (lower is better) Translates to: SPQGNLSLRWATRDPRRDDVHMV*ISFANS Trigger: AGAGTTTGCAAAACTAATCCAGACCATATGGACGTC...ATCCCTTCTGGGATCTCTCGTTGCCCATCGCAAAGAGAGGTTACCCTGAGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTACAAGGCTCCACTGTACACTAGACATTCTACTCTTGCTTACATAGTAAACCCTCACTCCAGACCCTaGCCAGGCTGTATCAACTTC | + |
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Preference number: 2 (lower is better) Translates to: LYKAPLYTRHSTLAYIVNPHSRP*PGCINF Trigger: GAAGTTGATACAGCCTGGTCAGGGTCTGGAGTGAGG...GTTTACTATGTAAGCAAGAGTAGAATGTCTAGTGTACAGTGGAGCCTTGTACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
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| 3UTR-3UTR CCA 90 bp | CTGTACAAGGCTCCACTGTACACTAGACATTCTACTCTTGCTTACATAGTAAACAGGGCTCTTGGCTCATaGGCGTTTCCTCTCTGGACT | + |
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Preference number: 2 (lower is better) Translates to: LYKAPLYTRHSTLAYIVNRALGS*AFPLWT Trigger: AGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCT...GTTTACTATGTAAGCAAGAGTAGAATGTCTAGTGTACAGTGGAGCCTTGTACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
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| 3UTR-3UTR CCA 90 bp | CCATCCAATATGTCCTCTTTGGTGAAGAGCCTCATACAATCCATTAACGTCACCCGTGGCGCATATCTCTaGATCTGGGTCTTGAACTCA | + |
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Preference number: 2 (lower is better) Translates to: PSNMSSLVKSLIQSINVTRGAYL*IWVLNS Trigger: TGAGTTCAAGACCCAGATCCAGAGATATGCGCCACG...GGTGACGTTAATGGATTGTATGAGGCTCTTCACCAAAGAGGACATATTGGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTACAAGGCTCCACTGTACACTAGACATTCTACTCTTGCTTACATAGTAAACATAAAGGGAAGCAGCTaGGGGAGATATCTCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LYKAPLYTRHSTLAYIVNIKGSS*GRYLRK Trigger: CTTCCTGAGATATCTCCCTCAGCTGCTTCCCTTTAT...GTTTACTATGTAAGCAAGAGTAGAATGTCTAGTGTACAGTGGAGCCTTGTACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
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| 3UTR GCA 72 bp | TCCGCATCAGTCCGTCTTCCTGCCAGGCCGTGCGTGTaGATGCGTGGCGCAGGGGCACATGGCTCCTCACTC | + |
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Preference number: 3 (lower is better) Translates to: SASVRLPARPCV*MRGAGAHGSSL Trigger: GAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAGGAAGACGGACTGATGCGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
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| 3UTR GCA 72 bp | GATGCTGCTGACTGTCTCCGCATCAGTCCGTCTTCCTaGCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: DAADCLRISPSS*QAVRVHAWRRG Trigger: GCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAGGAAGACGGACTGATGCGGAGACAGTCAGCAGCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
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| 3UTR CCA 72 bp | CAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATaGCTCCTCACTCCAGACCCTGACCAGGCTGTATCA | + |
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Preference number: 3 (lower is better) Translates to: QAVRVHAWRRGT*LLTPDPDQAVS Trigger: TGATACAGCCTGGTCAGGGTCTGGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
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| 3UTR CCA 72 bp | TGTCCTCCCAGCAGGTGTGGCACTGGGGGCAGCAGGTaGGCTGACGGTCCTCTCCCACAGACCGCTCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: CPPSRCGTGGSR*ADGPLPQTALV Trigger: AACAAGAGCGGTCTGTGGGAGAGGACCGTCAGCCCACCTGCTGCCCCCAGTGCCACACCTGCTGGGAGGACA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
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| 3UTR TCA 72 bp | AACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTaGCTGTCTCCGCATCAGTCCGTCTTCCTGCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: NERSQPRSRGCC*LSPHQSVFLPG Trigger: GCCTGGCAGGAAGACGGACTGATGCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
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| 3UTR CCA 72 bp | GTTAAGAGGGCTCTTGGCTCATGGGCGTTTCCTCTCTaGACTGGTGAGCAGGTCCAGGCAGGACGGCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: VKRALGSWAFPL*TGEQVQAGRPP Trigger: GGGAGGCCGTCCTGCCTGGACCTGCTCACCAGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCTCTTAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
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| 3UTR TCA 72 bp | GTGGCGCAGGGGCACATGGCTCCTCACTCCAGACCCTaGCCAGGCTGTATCAACTTCTGCTCGGCAGCTTTA | + |
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Preference number: 3 (lower is better) Translates to: VAQGHMAPHSRP*PGCINFCSAAL Trigger: TAAAGCTGCCGAGCAGAAGTTGATACAGCCTGGTCAGGGTCTGGAGTGAGGAGCCATGTGCCCCTGCGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
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| 3UTR-3UTR CAA 90 bp | TCGGTGCATGTGAGGGAGCTCTTCAGCTGCCCAACGAAGAGATCCCCAATCCGAGGGCTCACCACATCATaGGGGGACGACGTCCATATG | + |
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Preference number: 3 (lower is better) Translates to: SVHVRELFSCPTKRSPIRGLTTS*GDDVHM Trigger: CATATGGACGTCGTCCCCCAATGATGTGGTGAGCCC...TCGGATTGGGGATCTCTTCGTTGGGCAGCTGAAGAGCTCCCTCACATGCACCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR GCA 72 bp | ATGATCAAGGGTCTCAGGGCTGGCCTTAGGCCTTGCTaGCACCCGGTTCACCTCATTGTGGAGACCATCCAG | + |
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Preference number: 3 (lower is better) Translates to: MIKGLRAGLRPC*HPVHLIVETIQ Trigger: CTGGATGGTCTCCACAATGAGGTGAACCGGGTGGCAGCAAGGCCTAAGGCCAGCCCTGAGACCCTTGATCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR CCA 72 bp | CCTGGACTTAGCAGCGTTAAGAGGGCTCTTGGCTCATaGGCGTTTCCTCTCTGGACTGGTGAGCAGGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: PGLSSVKRALGS*AFPLWTGEQVQ Trigger: CTGGACCTGCTCACCAGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCTCTTAACGCTGCTAAGTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
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| 3UTR TCA 72 bp | ATGCCAAGATGGGGTAAGGGGTGGTGTGGGTGTCCCTaGGAAGCTCAGTCCAGAGGGCCTTTGTCTAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: MPRWGKGWCGCP*EAQSRGPLSKR Trigger: TCTCTTAGACAAAGGCCCTCTGGACTGAGCTTCTCAGGGACACCCACACCACCCCTTACCCCATCTTGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
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| 3UTR-3UTR CAA 90 bp | TCTTCAGCTGCCCAACGAAGAGATCCCCAATCCGACTGTCTTCCCTTTCCAGATACCCGGTTCACCTCATaGTGGAGACCATCCAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: SSAAQRRDPQSDCLPFPDTRFTS*WRPSRR Trigger: CCTTCTGGATGGTCTCCACAATGAGGTGAACCGGGT...ATCTGGAAAGGGAAGACAGTCGGATTGGGGATCTCTTCGTTGGGCAGCTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR CCA 72 bp | TGGCGCATATCTCTGGATCTGGGTCTTGAACTCAGATaGGCTCACCACATCATTGGGGGACGACGTCCATAT | + |
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Preference number: 3 (lower is better) Translates to: WRISLDLGLELR*AHHIIGGRRPY Trigger: ATATGGACGTCGTCCCCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAGATATGCGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTTTCCAGATACTTCCTCCACATCTGTCGCCCCTTTTCTTCATCAGGGAGATCTCTGGATCTGGGTCTaGAACTCAGATGGGCTCACC | + |
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Preference number: 3 (lower is better) Translates to: PFPDTSSTSVAPFLHQGDLWIWV*NSDGLT Trigger: GGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAG...ATCTCCCTGATGAAGAAAAGGGGCGACAGATGTGGAGGAAGTATCTGGAAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR CCA 72 bp | TTCCTGAGCATCCTGCTGATTATAGCCCATGAAGCGTaGCGCATATCTCTGGATCTGGGTCTTGAACTCAGA | + |
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Preference number: 3 (lower is better) Translates to: FLSILLIIAHEA*RISLDLGLELR Trigger: TCTGAGTTCAAGACCCAGATCCAGAGATATGCGCCACGCTTCATGGGCTATAATCAGCAGGATGCTCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| 3UTR TCA 72 bp | GAGACCGGGGTGGGTGAGAGGGTGGTAGGAAGAGCTTaGTACACTATCTTAAGAATCACCATTTACCCACTT | + |
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Preference number: 3 (lower is better) Translates to: ETGVGERVVGRA*YTILRITIYPL Trigger: AAGTGGGTAAATGGTGATTCTTAAGATAGTGTATCAAGCTCTTCCTACCACCCTCTCACCCACCCCGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
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| 3UTR CCA 72 bp | TCTTGCTTACATAGTAAACAAGTGTACACCAGCCCTTaGGCTCATGTTCACAGGTCTTCCCTAGAGAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: SCLHSKQVYTSP*AHVHRSSLEKG Trigger: ACCCTTCTCTAGGGAAGACCTGTGAACATGAGCCCAAGGGCTGGTGTACACTTGTTTACTATGTAAGCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
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| 3UTR-3UTR CAA 90 bp | CTGTACAAGGCTCCACTGTACACTAGACATTCTACTCTTGCTTACATAGTAAACTTAGTGCTGAATAGCTaGGCTCTTGGGACAGCATGG | + |
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Preference number: 3 (lower is better) Translates to: LYKAPLYTRHSTLAYIVNLVLNS*ALGTAW Trigger: CCATGCTGTCCCAAGAGCCAAGCTATTCAGCACTAA...GTTTACTATGTAAGCAAGAGTAGAATGTCTAGTGTACAGTGGAGCCTTGTACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
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| 3UTR TCA 72 bp | TTGGCTTCTCATCACCATCCAATATGTCCTCTTTGGTaGAGAGCCTCATACAATCCATTAACGTCACCTCAG | + |
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Preference number: 3 (lower is better) Translates to: LASHHHPICPLW*RASYNPLTSPQ Trigger: CTGAGGTGACGTTAATGGATTGTATGAGGCTCTTCACCAAAGAGGACATATTGGATGGTGATGAGAAGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| CDS-3UTR CCA 90 bp | CTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCGCGGCCGCAGCTCCTTaGCGAGAGCGGGAAAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LPGRACACVAQGHMAPHSAAAAP*RERESG Trigger: CCCACTTTCCCGCTCTCGCCAAGGAGCTGCGGCCGC...GGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065461.9 |
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| CDS-3UTR CCA 90 bp | TCCGTCTTCCTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTCCGTGTGAGCGCTGCTaGTGTGGCCGAGGTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVFLPGRACACVAQGHMAPCERC*CGRGPA Trigger: TGCGGGACCTCGGCCACACCAGCAGCGCTCACACGG...AGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAGGAAGACGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | CAGCGATGCTCCCAGCAGGCTCCAGATGGCGCTGTCCTCCCAGCAGGTGTGGCAGCGTGCGGGCCAGCATaGGGCTGCGACCCAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRCSQQAPDGAVLPAGVAACGPA*GCDPGF Trigger: GAAACCTGGGTCGCAGCCCCATGCTGGCCCGCACGC...TGCCACACCTGCTGGGAGGACAGCGCCATCTGGAGCCTGCTGGGAGCATCGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR GCA 90 bp | GTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCAGACCCTGACCAGGCTAGAGCTCCTTACGCGTaGGGGCCAGCATGGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHAWRRGTWLLTPDPDQARAPYA*GPAWGC Trigger: GCAGCCCCATGCTGGCCCGCACGCGTAAGGAGCTCT...AGCCTGGTCAGGGTCTGGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR GCA 90 bp | CAGCAGGCTCCAGATGGCGCTGTCCTCCCAGCAGGTGTGGCACTGGGGGCAGCAGCTGGCCTTAGGCCTTaGTGCCACCCGGTTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QQAPDGAVLPAGVALGAAAGLRP*CHPVHL Trigger: GAGGTGAACCGGGTGGCAGCAAGGCCTAAGGCCAGC...TGCTGCCCCCAGTGCCACACCTGCTGGGAGGACAGCGCCATCTGGAGCCTGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR GCA 90 bp | GTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCAGACCCTGACCAGGCTGAGGGAGGAGGGGCTTaGGTGAGCACCTGTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VHAWRRGTWLLTPDPDQAEGGGA*VSTCGA Trigger: TGCACCACAGGTGCTCACGCAAGCCCCTCCTCCCTC...AGCCTGGTCAGGGTCTGGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CCA 90 bp | TCCGTCTTCCTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTGCAAATAGGCGTCGCTaGTGCGCACTTGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVFLPGRACACVAQGHMAANRRR*CALGWR Trigger: CCTCCAGCCAAGTGCGCACCAGCGACGCCTATTTGC...AGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAGGAAGACGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCGTCTTCCTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGTGTCACAGTCCAGAATaGAGGAGGGGCCGTAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPSSCQAVRVHAWRRGTWCHSPE*RRGRRC Trigger: GCACCTACGGCCCCTCCTCCATTCTGGACTGTGACA...CCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAGGAAGACGGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCATCCCGGGCCAGGTCTaGTTGGCTGTTCGATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPGRACACVAQGHMAPHSIPGQV*LAVRFL Trigger: AAGAAATCGAACAGCCAATCAGACCTGGCCCGGGAT...GGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCTCTGGATCTGGGTCTTaGACTCAGATGGGCTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGRACACVAQGHMAPHSSGSGS*TQMGSP Trigger: TGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGA...GGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR GCA 90 bp | CAGCGATGCTCCCAGCAGGCTCCAGATGGCGCTGTCCTCCCAGCAGGTGTGGCAAATAGGCGTCGCTGGTaGGCACTTGGCTGGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QRCSQQAPDGAVLPAGVANRRRW*ALGWRT Trigger: TGTCCTCCAGCCAAGTGCGCACCAGCGACGCCTATT...TGCCACACCTGCTGGGAGGACAGCGCCATCTGGAGCCTGCTGGGAGCATCGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGCTCTTGGCTCATGGGCGTTTCCTCTCTGGACTGGTGAGCAGGTCCAGCCGTGTGAGCGCTGCTaGTGTGGCCGAGGTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRALGSWAFPLWTGEQVQPCERC*CGRGPA Trigger: TGCGGGACCTCGGCCACACCAGCAGCGCTCACACGG...CTGGACCTGCTCACCAGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCTCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCAGACGGCTCACCACATCATTaGGGGACGACGTCCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: QAVRVHAWRRGTWLLTPDGSPHH*GTTSIW Trigger: CCATATGGACGTCGTCCCCCAATGATGTGGTGAGCC...GTCTGGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCTATAGTGGCCTCCCATaGTGGTTCCGGAGTGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPGRACACVAQGHMAPHSYSGLP*WFRSDW Trigger: CCAATCACTCCGGAACCACCATGGGAGGCCACTATA...GGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR TCA 90 bp | CAGCAGGCTCCAGATGGCGCTGTCCTCCCAGCAGGTGTGGCACTGGGGGCAGCATCTTCATCAGGGAGATaGTCAAGGGTCTCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QQAPDGAVLPAGVALGAASSSGR*SRVSGL Trigger: CAGCCCTGAGACCCTTGATCATCTCCCTGATGAAGA...TGCTGCCCCCAGTGCCACACCTGCTGGGAGGACAGCGCCATCTGGAGCCTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | TCCGTCTTCCTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTCGGGCCAGGTCTGATTaGCTGTTCGATTTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVFLPGRACACVAQGHMARARSD*LFDFFW Trigger: CCAGAAGAAATCGAACAGCCAATCAGACCTGGCCCG...AGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAGGAAGACGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CCA 90 bp | ACTGTCTCCGCATCAGTCCGTCTTCCTGCCAGGCCGTGCGTGTGCATGCGTGGCGGTACTCAGAACGGCTaGCTGCTTGGTAGAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TVSASVRLPARPCVCMRGGTQNG*LLGRGP Trigger: AGGGCCTCTACCAAGCAGCCAGCCGTTCTGAGTACC...GCCACGCATGCACACGCACGGCCTGGCAGGAAGACGGACTGATGCGGAGACAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCAGACCAGCCAGACCCTaGGCACTCTTTGAATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LPGRACACVAQGHMAPHSRPARP*ALFEFM Trigger: CATGAATTCAAAGAGTGCCCAGGGTCTGGCTGGTCT...GGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CCA 90 bp | TGTGGCACTGGGGGCAGCAGGTGGGCTGACGGTCCTCTCCCACAGACCGCTCTTGGCTCACCACATCATTaGGGGACGACGTCCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: CGTGGSRWADGPLPQTALGSPHH*GTTSIW Trigger: CCATATGGACGTCGTCCCCCAATGATGTGGTGAGCC...AAGAGCGGTCTGTGGGAGAGGACCGTCAGCCCACCTGCTGCCCCCAGTGCCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR TCA 90 bp | ACTGTCTCCGCATCAGTCCGTCTTCCTGCCAGGCCGTGCGTGTGCATGCGTGGCACGGGTCTGGCTCTCTaGCCGCTTACTACTCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVSASVRLPARPCVCMRGTGLAL*PLTTPN Trigger: ATTGGGAGTAGTAAGCGGTCAGAGAGCCAGACCCGT...GCCACGCATGCACACGCACGGCCTGGCAGGAAGACGGACTGATGCGGAGACAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR TCA 90 bp | TCCAGCAGCGATGCTCCCAGCAGGCTCCAGATGGCGCTGTCCTCCCAGCAGGTGTCTTCATCAGGGAGATaGTCAAGGGTCTCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSDAPSRLQMALSSQQVSSSGR*SRVSGL Trigger: CAGCCCTGAGACCCTTGATCATCTCCCTGATGAAGA...CACCTGCTGGGAGGACAGCGCCATCTGGAGCCTGCTGGGAGCATCGCTGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR TCA 90 bp | CAGCGATGCTCCCAGCAGGCTCCAGATGGCGCTGTCCTCCCAGCAGGTGTGGCAATGGTGGTTCCGGAGTaGTTGGACACAGCATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRCSQQAPDGAVLPAGVAMVVPE*LDTAYR Trigger: CCTGTATGCTGTGTCCAATCACTCCGGAACCACCAT...TGCCACACCTGCTGGGAGGACAGCGCCATCTGGAGCCTGCTGGGAGCATCGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCAGACAGGGTAACCTCTCTTTaGGATGGGCAACGAGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QAVRVHAWRRGTWLLTPDRVTSL*DGQREI Trigger: GATCTCTCGTTGCCCATCGCAAAGAGAGGTTACCCT...GTCTGGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTGGGTGTCCCTGAGAAGCTCAGTCCAGAGGGCCTTTGTCTAAGAGACTCTCTCGCCCTGGAGAACTaGAGCGGCTGGGCCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGVPEKLSPEGLCLRDSLALEN*SGWAQR Trigger: CCTCTGGGCCCAGCCGCTCCAGTTCTCCAGGGCGAG...AGAGTCTCTTAGACAAAGGCCCTCTGGACTGAGCTTCTCAGGGACACCCACACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGCTCCAGATGGCGCTGTCCTCCCAGCAGGTGTGGCACTGGGGGCAGCACTACATACGGGAGGGTaGACTGGCCAGTTCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QQAPDGAVLPAGVALGAALHTGG*TGQFIE Trigger: TTCTATGAACTGGCCAGTCCACCCTCCCGTATGTAG...TGCTGCCCCCAGTGCCACACCTGCTGGGAGGACAGCGCCATCTGGAGCCTGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCGTGTTGCTCAGGCACTaGAGAATTGAGTTCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPGRACACVAQGHMAPHSVLLRH*RIEFMK Trigger: CTTCATGAACTCAATTCTTCAGTGCCTGAGCAACAC...GGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR GCA 90 bp | ATGCAAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCCAGAGGCCTGGCCCTTaGTCTTCTCCCACAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MQTREASRGAEDAADCLRQRPGP*SSPTVC Trigger: ACACACTGTGGGAGAAGAGCAAGGGCCAGGCCTCTG...GCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTTGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR GCA 90 bp | CAAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCATCAATAGGCGTCGCTGGTaGGCACTTGGCTGGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QTREASRGAEDAADCLRINRRRW*ALGWRT Trigger: TGTCCTCCAGCCAAGTGCGCACCAGCGACGCCTATT...GATGCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | GTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCAGACCCTGACCAGGCTAGACCAGCCAGACCCTaGGCACTCTTTGAATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VHAWRRGTWLLTPDPDQARPARP*ALFEFL Trigger: CAAGAATTCAAAGAGTGCCCAGGGTCTGGCTGGTCT...AGCCTGGTCAGGGTCTGGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065461.9 |
||
| CDS-3UTR TCA 90 bp | CAAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCATCTCATGGGCAGGTAGCTaGGGGAGTTGCTGGAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: QTREASRGAEDAADCLRISWAGS*GSCWKL Trigger: GAGTTTCCAGCAACTCCCTCAGCTACCTGCCCATGA...GATGCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR TCA 90 bp | CTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCATATGTCCTCTTTGGTaGAGAGCCTCATACAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGRACACVAQGHMAPHSICPLW*RASYNP Trigger: TGGATTGTATGAGGCTCTTCACCAAAGAGGACATAT...GGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | TTAAGAGGGCTCTTGGCTCATGGGCGTTTCCTCTCTGGACTGGTGAGCAGGTCCCTGAAGTCCGGAGGCTaGAGAAATCCCGGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRGLLAHGRFLSGLVSRSLKSGG*RNPGPG Trigger: ACCTGGCCCGGGATTTCTCCAGCCTCCGGACTTCAG...GGACCTGCTCACCAGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCTCTTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CCA 90 bp | CAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCAGACGGGACGACGTCCATATaGTCTGGATTAGTTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QAVRVHAWRRGTWLLTPDGTTSI*SGLVLQ Trigger: TTGCAAAACTAATCCAGACCATATGGACGTCGTCCC...GTCTGGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | GTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCAGACCCTGACCAGGCTGCATATCTCTGGATCTaGGTCTTGAACTCAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHAWRRGTWLLTPDPDQAAYLWI*VLNSDG Trigger: CCCATCTGAGTTCAAGACCCAGATCCAGAGATATGC...AGCCTGGTCAGGGTCTGGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | CAGCGATGCTCCCAGCAGGCTCCAGATGGCGCTGTCCTCCCAGCAGGTGTGGCAGAGCACCAAGATCTTTaGGAACCTCTGGACAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRCSQQAPDGAVLPAGVAEHQDL*EPLDRE Trigger: TTCTCTGTCCAGAGGTTCCCAAAGATCTTGGTGCTC...TGCCACACCTGCTGGGAGGACAGCGCCATCTGGAGCCTGCTGGGAGCATCGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | ATGCAAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCAGTGGCCTCCCATGGTaGTTCCGGAGTGATTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: MQTREASRGAEDAADCLRSGLPW*FRSDWT Trigger: TGTCCAATCACTCCGGAACCACCATGGGAGGCCACT...GCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTTGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR TCA 90 bp | CAGCGATGCTCCCAGCAGGCTCCAGATGGCGCTGTCCTCCCAGCAGGTGTGGCAGTGTTGCTCAGGCACTaGAGAATTGAGTTCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRCSQQAPDGAVLPAGVAVLLRH*RIEFMK Trigger: CTTCATGAACTCAATTCTTCAGTGCCTGAGCAACAC...TGCCACACCTGCTGGGAGGACAGCGCCATCTGGAGCCTGCTGGGAGCATCGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR TCA 90 bp | CAAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCATCTCTGGATCTGGGTCTTaGACTCAGATGGGCTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QTREASRGAEDAADCLRISGSGS*TQMGSP Trigger: TGGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGA...GATGCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | ACCACAAGCTTAAAAATGCAAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTCTGGGCCCAGAGGCCTaGCCCTTGCTCTTCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TTSLKMQTREASRGAEDALGPEA*PLLFSH Trigger: GTGGGAGAAGAGCAAGGGCCAGGCCTCTGGGCCCAG...AGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTTGCATTTTTAAGCTTGTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR TCA 90 bp | ACCACAAGCTTAAAAATGCAAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGTCGGTAGGTGGGACTaGGGACTTCAGGGACTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTSLKMQTREASRGAEDAVGRWD*GLQGLG Trigger: CCCGAGTCCCTGAAGTCCTCAGTCCCACCTACCGAC...AGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTTGCATTTTTAAGCTTGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR TCA 90 bp | TGTGGCACTGGGGGCAGCAGGTGGGCTGACGGTCCTCTCCCACAGACCGCTCTTAATTCACAAATGTTGTaGGCTTGCTGGTTCGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: CGTGGSRWADGPLPQTALNSQML*ACWFVS Trigger: GGATACGAACCAGCAAGCTCACAACATTTGTGAATT...AAGAGCGGTCTGTGGGAGAGGACCGTCAGCCCACCTGCTGCCCCCAGTGCCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCGTCTTCCTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGATGGTTGGTGTTTTCTaGAGCAAATTCTCTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPSSCQAVRVHAWRRGTWMVGVF*SKFSQV Trigger: GACTTGAGAGAATTTGCTTCAGAAAACACCAACCAT...CCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAGGAAGACGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR TCA 90 bp | AAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCATCAATGGTGGTTCCGGAGTaGTTGGACACAGCATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KREKPAEEPRMLLTVSASMVVPE*LDTAYR Trigger: CCTGTATGCTGTGTCCAATCACTCCGGAACCACCAT...TGATGCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCACTCCAGACCCTGACCAGGCTGTATCAACTTCTGCTCGGCAGCTTTATTAGGAGGCGGCCAGGTTaGCCCCATAGGAAGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLQTLTRLYQLLLGSFIRRRPG*PHRKKG Trigger: CCCCTTCTTCCTATGGGGCCAACCTGGCCGCCTCCT...AATAAAGCTGCCGAGCAGAAGTTGATACAGCCTGGTCAGGGTCTGGAGTGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CCA 90 bp | AAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCATCATACGGGAGGGTGGACTaGCCAGTTCATAGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KREKPAEEPRMLLTVSASYGRVD*PVHRRA Trigger: TGCTCTTCTATGAACTGGCCAGTCCACCCTCCCGTA...TGATGCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | TCGGTGCATGTGAGGGAGCTCTTCAGCTGCCCAACGAAGAGATCCCCAATCCGAAGACCAGCCAGACCCTaGGCACTCTTTGAATTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVHVRELFSCPTKRSPIRRPARP*ALFEFP Trigger: GGGGAATTCAAAGAGTGCCCAGGGTCTGGCTGGTCT...TCGGATTGGGGATCTCTTCGTTGGGCAGCTGAAGAGCTCCCTCACATGCACCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
||
| 3UTR CAA 72 bp | TCTGTACCCCTGGACTTAGCAGCGTTAAGAGGGCTCTaGGCTCATGGGCGTTTCCTCTCTGGACTGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVPLDLAALRGL*AHGRFLSGLVS Trigger: GCTCACCAGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCTCTTAACGCTGCTAAGTCCAGGGGTACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | GTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCAGACCCTGACCAGGCTGACGTCCATATGGTCTaGATTAGTTTTGCAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VHAWRRGTWLLTPDPDQADVHMV*ISFANS Trigger: AGAGTTTGCAAAACTAATCCAGACCATATGGACGTC...AGCCTGGTCAGGGTCTGGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGCTCTTGGCTCATGGGCGTTTCCTCTCTGGACTGGTGAGCAGGTCCAGGGTCTTGAACTCAGATaGGCTCACCACATCATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRALGSWAFPLWTGEQVQGLELR*AHHIIG Trigger: CCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACC...CTGGACCTGCTCACCAGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | CAAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCATCCGGTTCACCTCATTGTaGAGACCATCCAGAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QTREASRGAEDAADCLRIRFTSL*RPSRRK Trigger: TTTCCTTCTGGATGGTCTCCACAATGAGGTGAACCG...GATGCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGCTCTTGGCTCATGGGCGTTTCCTCTCTGGACTGGTGAGCAGGTCCAGGAGAATCGCTTCAGGTaGAGCACCAAGATCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRALGSWAFPLWTGEQVQENRFR*STKIFG Trigger: CCCAAAGATCTTGGTGCTCCACCTGAAGCGATTCTC...CTGGACCTGCTCACCAGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | CAAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCATCTGGTTCCGGAGTGATTaGACACAGCATACAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTREASRGAEDAADCLRIWFRSD*TQHTGC Trigger: ACAACCTGTATGCTGTGTCCAATCACTCCGGAACCA...GATGCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGTGGGTGTCCCTGAGAAGCTCAGTCCAGAGGGCCTTTGTCTAAGAGACTACGGGAGGGTGGACTaGCCAGTTCATAGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGVGVPEKLSPEGLCLRDYGRVD*PVHRRA Trigger: TGCTCTTCTATGAACTGGCCAGTCCACCCTCCCGTA...GTCTCTTAGACAAAGGCCCTCTGGACTGAGCTTCTCAGGGACACCCACACCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR TCA 90 bp | ACCACAAGCTTAAAAATGCAAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTAGTCCGGTAGCCATCTaGAGTCCGGAGGCTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TTSLKMQTREASRGAEDASPVAI*SPEAGE Trigger: TTCTCCAGCCTCCGGACTTCAGATGGCTACCGGACT...AGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTTGCATTTTTAAGCTTGTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR GCA 90 bp | GGTGTGGGTGTCCCTGAGAAGCTCAGTCCAGAGGGCCTTTGTCTAAGAGACTCTGCACCTGTGGTGCACTaGCCTTTCGACCATAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVGVPEKLSPEGLCLRDSAPVVH*PFDHSS Trigger: AGAACTATGGTCGAAAGGGCAGTGCACCACAGGTGC...AGAGTCTCTTAGACAAAGGCCCTCTGGACTGAGCTTCTCAGGGACACCCACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CCA 90 bp | TTAAGAGGGCTCTTGGCTCATGGGCGTTTCCTCTCTGGACTGGTGAGCAGGTCCCGTGGCGCATATCTCTaGATCTGGGTCTTGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRGLLAHGRFLSGLVSRSRGAYL*IWVLNS Trigger: TGAGTTCAAGACCCAGATCCAGAGATATGCGCCACG...GGACCTGCTCACCAGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCTCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGACGGTCCTCTCCCACAGACCGCTCTTGTTTTTATTACACACAGGAAAGCAAATAGGCGTCGCTaGTGCGCACTTGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WADGPLPQTALVFITHRKANRRR*CALGWR Trigger: CCTCCAGCCAAGTGCGCACCAGCGACGCCTATTTGC...TTTCCTGTGTGTAATAAAAACAAGAGCGGTCTGTGGGAGAGGACCGTCAGCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR TCA 90 bp | CAAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCATCAATTCACAAATGTTGTaGGCTTGCTGGTTCGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: QTREASRGAEDAADCLRINSQML*ACWFVS Trigger: GGATACGAACCAGCAAGCTCACAACATTTGTGAATT...GATGCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | CTTAGCAGCGTTAAGAGGGCTCTTGGCTCATGGGCGTTTCCTCTCTGGACTGGTGGTCTTGAACTCAGATaGGCTCACCACATCATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSVKRALGSWAFPLWTGGLELR*AHHIIG Trigger: CCCAATGATGTGGTGAGCCCATCTGAGTTCAAGACC...ACCAGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCTCTTAACGCTGCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | TGTGGCACTGGGGGCAGCAGGTGGGCTGACGGTCCTCTCCCACAGACCGCTCTTTGTAAACAGCATGGTTaGTGTTTTCTGAAGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: CGTGGSRWADGPLPQTALCKQHG*CFLKQI Trigger: AATTTGCTTCAGAAAACACCAACCATGCTGTTTACA...AAGAGCGGTCTGTGGGAGAGGACCGTCAGCCCACCTGCTGCCCCCAGTGCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | CAGCGATGCTCCCAGCAGGCTCCAGATGGCGCTGTCCTCCCAGCAGGTGTGGCATGTAAACAGCATGGTTaGTGTTTTCTGAAGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: QRCSQQAPDGAVLPAGVACKQHG*CFLKQI Trigger: AATTTGCTTCAGAAAACACCAACCATGCTGTTTACA...TGCCACACCTGCTGGGAGGACAGCGCCATCTGGAGCCTGCTGGGAGCATCGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | TTAAGAGGGCTCTTGGCTCATGGGCGTTTCCTCTCTGGACTGGTGAGCAGGTCCTGGTTCCGGAGTGATTaGACACAGCATACAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRGLLAHGRFLSGLVSRSWFRSD*TQHTGC Trigger: ACAACCTGTATGCTGTGTCCAATCACTCCGGAACCA...GGACCTGCTCACCAGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCTCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCACTCCAGACCCTGACCAGGCTGTATCAACTTCTGCTCGGCAGCTTTATTAGTGGCCTCCCATGGTaGTTCCGGAGTGATTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SSLQTLTRLYQLLLGSFISGLPW*FRSDWT Trigger: TGTCCAATCACTCCGGAACCACCATGGGAGGCCACT...AATAAAGCTGCCGAGCAGAAGTTGATACAGCCTGGTCAGGGTCTGGAGTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR TCA 90 bp | AAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCATCAATATGTCCTCTTTGGTaGAGAGCCTCATACAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KREKPAEEPRMLLTVSASICPLW*RASYNP Trigger: TGGATTGTATGAGGCTCTTCACCAAAGAGGACATAT...TGATGCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGACGGTCCTCTCCCACAGACCGCTCTTGTTTTTATTACACACAGGAAATGCCATAGCCCGGTTTaGCATAGGGGGCATCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WADGPLPQTALVFITHRKCHSPV*HRGHLC Trigger: ACACAGATGCCCCCTATGCCAAACCGGGCTATGGCA...TTTCCTGTGTGTAATAAAAACAAGAGCGGTCTGTGGGAGAGGACCGTCAGCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CCA 90 bp | ACTTCAAAGCAGAGTAACTTTAGATCCCAGGTCTACTGTGACGATGCTTGGGCCTCACCCCCTGGTCTCTaGCATTCATGGGCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSKQSNFRSQVYCDDAWASPPGL*HSWAGS Trigger: GCTACCTGCCCATGAATGCCAGAGACCAGGGGGTGA...GGCCCAAGCATCGTCACAGTAGACCTGGGATCTAAAGTTACTCTGCTTTGAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CCA 90 bp | CTTAGCAGCGTTAAGAGGGCTCTTGGCTCATGGGCGTTTCCTCTCTGGACTGGTGCATATCTCTGGATCTaGGTCTTGAACTCAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSVKRALGSWAFPLWTGAYLWI*VLNSDG Trigger: CCCATCTGAGTTCAAGACCCAGATCCAGAGATATGC...ACCAGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCTCTTAACGCTGCTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCACTCCAGACCCTGACCAGGCTGTATCAACTTCTGCTCGGCAGCTTTATTTATAGTGGCCTCCCATaGTGGTTCCGGAGTGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLQTLTRLYQLLLGSFIYSGLP*WFRSDW Trigger: CCAATCACTCCGGAACCACCATGGGAGGCCACTATA...AATAAAGCTGCCGAGCAGAAGTTGATACAGCCTGGTCAGGGTCTGGAGTGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | AAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCATCAGACGTCCATATGGTCTaGATTAGTTTTGCAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KREKPAEEPRMLLTVSASDVHMV*ISFANS Trigger: AGAGTTTGCAAAACTAATCCAGACCATATGGACGTC...TGATGCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | CTTAGCAGCGTTAAGAGGGCTCTTGGCTCATGGGCGTTTCCTCTCTGGACTGGTGGGACGACGTCCATATaGTCTGGATTAGTTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSSVKRALGSWAFPLWTGGTTSI*SGLVLQ Trigger: TTGCAAAACTAATCCAGACCATATGGACGTCGTCCC...ACCAGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCTCTTAACGCTGCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR TCA 90 bp | TGGGCTGACGGTCCTCTCCCACAGACCGCTCTTGTTTTTATTACACACAGGAAAAATTCTTGGCTTTGTTaGGCAGAAGCCCCACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WADGPLPQTALVFITHRKNSWLC*AEAPRR Trigger: CCTTCGTGGGGCTTCTGCTCAACAAAGCCAAGAATT...TTTCCTGTGTGTAATAAAAACAAGAGCGGTCTGTGGGAGAGGACCGTCAGCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065461.9 |
||
| CDS-3UTR TCA 90 bp | ACCACAAGCTTAAAAATGCAAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGAAGAATTGAGTTCATaGAGCACGTGTTCCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TTSLKMQTREASRGAEDAEELSS*STCSQG Trigger: ACCTTGGGAACACGTGCTTCATGAACTCAATTCTTC...AGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTTGCATTTTTAAGCTTGTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR TCA 90 bp | CTTAGCAGCGTTAAGAGGGCTCTTGGCTCATGGGCGTTTCCTCTCTGGACTGGTATGGTTGGTGTTTTCTaGAGCAAATTCTCTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSVKRALGSWAFPLWTGMVGVF*SKFSQV Trigger: GACTTGAGAGAATTTGCTTCAGAAAACACCAACCAT...ACCAGTCCAGAGAGGAAACGCCCATGAGCCAAGAGCCCTCTTAACGCTGCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR GCA 90 bp | ACTCCAGACCCTGACCAGGCTGTATCAACTTCTGCTCGGCAGCTTTATTTTACTAGGGTAACCTCTCTTTaGGATGGGCAACGAGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: TPDPDQAVSTSARQLYFTRVTSL*DGQREI Trigger: GATCTCTCGTTGCCCATCGCAAAGAGAGGTTACCCT...AGTAAAATAAAGCTGCCGAGCAGAAGTTGATACAGCCTGGTCAGGGTCTGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | CTGTACAAGGCTCCACTGTACACTAGACATTCTACTCTTGCTTACATAGTAAACCTCAGGGTCACCCCCTaGTCTCTGGCATTCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LYKAPLYTRHSTLAYIVNLRVTP*SLAFMG Trigger: GCCCATGAATGCCAGAGACCAGGGGGTGACCCTGAG...GTTTACTATGTAAGCAAGAGTAGAATGTCTAGTGTACAGTGGAGCCTTGTACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGACCCTGACCAGGCTGTATCAACTTCTGCTCGGCAGCTTTATTTTACTCTACATACGGGAGGGTaGACTGGCCAGTTCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TPDPDQAVSTSARQLYFTLHTGG*TGQFIE Trigger: TTCTATGAACTGGCCAGTCCACCCTCCCGTATGTAG...AGTAAAATAAAGCTGCCGAGCAGAAGTTGATACAGCCTGGTCAGGGTCTGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR TCA 90 bp | TGGGCTGACGGTCCTCTCCCACAGACCGCTCTTGTTTTTATTACACACAGGAAAGAAGAATTGAGTTCATaGAGCACGTGTTCCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WADGPLPQTALVFITHRKEELSS*STCSQG Trigger: ACCTTGGGAACACGTGCTTCATGAACTCAATTCTTC...TTTCCTGTGTGTAATAAAAACAAGAGCGGTCTGTGGGAGAGGACCGTCAGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CCA 90 bp | ACTTCAAAGCAGAGTAACTTTAGATCCCAGGTCTACTGTGACGATGCTTGGGCCGAGCACCAAGATCTTTaGGAACCTCTGGACAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSKQSNFRSQVYCDDAWAEHQDL*EPLDRE Trigger: TTCTCTGTCCAGAGGTTCCCAAAGATCTTGGTGCTC...GGCCCAAGCATCGTCACAGTAGACCTGGGATCTAAAGTTACTCTGCTTTGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CCA 90 bp | CTGTACAAGGCTCCACTGTACACTAGACATTCTACTCTTGCTTACATAGTAAACCGTGGCGCATATCTCTaGATCTGGGTCTTGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LYKAPLYTRHSTLAYIVNRGAYL*IWVLNS Trigger: TGAGTTCAAGACCCAGATCCAGAGATATGCGCCACG...GTTTACTATGTAAGCAAGAGTAGAATGTCTAGTGTACAGTGGAGCCTTGTACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| 3UTR CAA 72 bp | CAAGTTGGCTTCTCATCACCATCCAATATGTCCTCTTaGGTGAAGAGCCTCATACAATCCATTAACGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: QVGFSSPSNMSS*VKSLIQSINVT Trigger: GGTGACGTTAATGGATTGTATGAGGCTCTTCACCAAAGAGGACATATTGGATGGTGATGAGAAGCCAACTTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAGCTACTATTTATTCTGTACAAGGCTCCACTGTACACTAGACATTCTACTCGGTTCACCTCATTGTaGAGACCATCCAGAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SKLLFILYKAPLYTRHSTRFTSL*RPSRRK Trigger: TTTCCTTCTGGATGGTCTCCACAATGAGGTGAACCG...AGTAGAATGTCTAGTGTACAGTGGAGCCTTGTACAGAATAAATAGTAGCTTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CAA 90 bp | TCCGTCTTCCTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTGGAGGGAGGAGGGGCTaGCGTGAGCACCTGTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVFLPGRACACVAQGHMAGGRRG*REHLWC Trigger: GCACCACAGGTGCTCACGCAAGCCCCTCCTCCCTCC...AGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAGGAAGACGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CAA 90 bp | TCCGTCTTCCTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTGTCGCTGGTGCGCACTaGGCTGGAGGACATGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVFLPGRACACVAQGHMAVAGAH*AGGHGC Trigger: ACACCCATGTCCTCCAGCCAAGTGCGCACCAGCGAC...AGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAGGAAGACGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS GCA 90 bp | TGGCTGCTTGGTAGAGGCCCTGCAGGGCACAGAGCTCCTTACGCGTaGGGGCCAGCATGGGGCTGCGACCCAGGTTTCCAGGGTCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: WLLGRGPAGHRAPYA*GPAWGCDPGFQGLS Trigger: GGATAGACCCTGGAAACCTGGGTCGCAGCCCCATGCTGGCCCGCACGCGTAAGGAGCTCTGTGCCCTGCAGGGCCTCTACCAAGCAGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000177054.8 |
||
| CDS GCA 90 bp | CTCGCCCTGGAGAACTGGAGCGGCTGGGCCCAGAGGCCTGGCCCTTaGTCTTCTCCCACAGTGTGTAACGGCCACTTGGTCGGTAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LALENWSGWAQRPGP*SSPTVCNGHLVGRW Trigger: CCACCTACCGACCAAGTGGCCGTTACACACTGTGGGAGAAGAGCAAGGGCCAGGCCTCTGGGCCCAGCCGCTCCAGTTCTCCAGGGCGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000177054.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGCACTGGGGGCAGCAGGTGGGCTGACGGTCCTCTCCCACAGACCGCTCTTAATCCACTGCCTCCGTaGAGTCCACTGCCCGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CGTGGSRWADGPLPQTALNPLPP*SPLPEG Trigger: GCCCTCGGGCAGTGGACTCAACGGAGGCAGTGGATT...AAGAGCGGTCTGTGGGAGAGGACCGTCAGCCCACCTGCTGCCCCCAGTGCCACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CAA 90 bp | TCCAGCAGCGATGCTCCCAGCAGGCTCCAGATGGCGCTGTCCTCCCAGCAGGTGGTCGCTGGTGCGCACTaGGCTGGAGGACATGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSSDAPSRLQMALSSQQVVAGAH*AGGHGC Trigger: ACACCCATGTCCTCCAGCCAAGTGCGCACCAGCGAC...CACCTGCTGGGAGGACAGCGCCATCTGGAGCCTGCTGGGAGCATCGCTGCTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCGACCCTGGGCACTCTTaGAATTCATGGTGTCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPGRACACVAQGHMAPHSDPGHS*NSWCLA Trigger: GGCGAGACACCATGAATTCAAAGAGTGCCCAGGGTC...GGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CAA 90 bp | AGTCCGTCTTCCTGCCAGGCCGTGCGTGTGCATGCGTGGCGCAGGGGCACATGGGGGCTCACCACATCATaGGGGGACGACGTCCATATG | + |
|
Preference number: 5 (lower is better) Translates to: SPSSCQAVRVHAWRRGTWGLTTS*GDDVHM Trigger: CATATGGACGTCGTCCCCCAATGATGTGGTGAGCCC...CCATGTGCCCCTGCGCCACGCATGCACACGCACGGCCTGGCAGGAAGACGGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS CCA 90 bp | AGAGGCCTGGCCCTTGCTCTTCTCCCACAGTGTGTAACGGCCACTTaGTCGGTAGGTGGGACTGAGGACTTCAGGGACTCGGGAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGLALALLPQCVTAT*SVGGTEDFRDSGGR Trigger: CCTCCCTCCCGAGTCCCTGAAGTCCTCAGTCCCACCTACCGACCAAGTGGCCGTTACACACTGTGGGAGAAGAGCAAGGGCCAGGCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000177054.8 |
||
| CDS-3UTR CAA 90 bp | GTGCATGCGTGGCGCAGGGGCACATGGCTCCTCACTCCAGACCCTGACCAGGCTACCCGGTTCACCTCATaGTGGAGACCATCCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VHAWRRGTWLLTPDPDQATRFTS*WRPSRR Trigger: CCTTCTGGATGGTCTCCACAATGAGGTGAACCGGGT...AGCCTGGTCAGGGTCTGGAGTGAGGAGCCATGTGCCCCTGCGCCACGCATGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CAA 90 bp | TGTGGCACTGGGGGCAGCAGGTGGGCTGACGGTCCTCTCCCACAGACCGCTCTTGGAGCACCAAGATCTTaGGGAACCTCTGGACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CGTGGSRWADGPLPQTALGAPRS*GTSGQR Trigger: TCTCTGTCCAGAGGTTCCCAAAGATCTTGGTGCTCC...AAGAGCGGTCTGTGGGAGAGGACCGTCAGCCCACCTGCTGCCCCCAGTGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS TCA 90 bp | GAGTCCACTGCCCGAGGGCCTTTCATTGCCACGGGTCTGGCTCTCTaGCCGCTTACTACTCCCAATGATGTCAGATCTCAGCAGGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ESTARGPFIATGLAL*PLTTPNDVRSQQGA Trigger: CGCCCCCTGCTGAGATCTGACATCATTGGGAGTAGTAAGCGGTCAGAGAGCCAGACCCGTGGCAATGAAAGGCCCTCGGGCAGTGGACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000176671.2 ENSMUST00000177054.8 |
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| CDS CCA 90 bp | CCATCTGAAGTCCGGAGGCTGGAGAAATCCCGGGCCAGGTCTGATTaGCTGTTCGATTTCTTCTGGCTCAGGGTCACCCCCTGGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSEVRRLEKSRARSD*LFDFFWLRVTPWSL Trigger: CAGAGACCAGGGGGTGACCCTGAGCCAGAAGAAATCGAACAGCCAATCAGACCTGGCCCGGGATTTCTCCAGCCTCCGGACTTCAGATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000176671.2 ENSMUST00000177054.8 |
||
| CDS CCA 90 bp | CACTCTTTGAATTCATGGTGTCTCGCCCTGGAGAACTGGAGCGGCTaGGCCCAGAGGCCTGGCCCTTGCTCTTCTCCCACAGTGTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: HSLNSWCLALENWSG*AQRPGPCSSPTVCN Trigger: GTTACACACTGTGGGAGAAGAGCAAGGGCCAGGCCTCTGGGCCCAGCCGCTCCAGTTCTCCAGGGCGAGACACCATGAATTCAAAGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000177054.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCTGACGGTCCTCTCCCACAGACCGCTCTTGTTTTTATTACACACAGGAAACGCGGCCGCAGCTCCTaGGCGAGAGCGGGAAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WADGPLPQTALVFITHRKRGRSS*ARAGKW Trigger: CCACTTTCCCGCTCTCGCCAAGGAGCTGCGGCCGCG...TTTCCTGTGTGTAATAAAAACAAGAGCGGTCTGTGGGAGAGGACCGTCAGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065461.9 |
||
| CDS TCA 90 bp | TTTCATTGCCACGGGTCTGGCTCTCTGACCGCTTACTACTCCCAATaGTGTCAGATCTCAGCAGGGGGCGGCCCCTGTCACAGTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FHCHGSGSLTAYYSQ*CQISAGGGPCHSPE Trigger: TTCTGGACTGTGACAGGGGCCGCCCCCTGCTGAGATCTGACATCATTGGGAGTAGTAAGCGGTCAGAGAGCCAGACCCGTGGCAATGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000176671.2 ENSMUST00000177054.8 |
||
| CDS-3UTR CAA 90 bp | AAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCATCAGTGGGGGAGACCGGCTaGAAACCAAGTTTTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KREKPAEEPRMLLTVSASVGETG*KPSFSF Trigger: GAAGGAAAAACTTGGTTTCAAGCCGGTCTCCCCCAC...TGATGCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CAA 90 bp | TTGAACTCAGATGGGCTCACCACATCATTGGGGGACGACGTCCATATGGTCTGGGACCCTGGGCACTCTTaGAATTCCCCTGTGCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LNSDGLTTSLGDDVHMVWDPGHS*NSPVPE Trigger: CTCGGGCACAGGGGAATTCAAAGAGTGCCCAGGGTC...CCAGACCATATGGACGTCGTCCCCCAATGATGTGGTGAGCCCATCTGAGTTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
||
| CDS CCA 90 bp | TTCGACCATAGTTCTCCAGATAGTCTGTTAGGTACTCAGAACGGCTaGCTGCTTGGTAGAGGCCCTGCAGGGCACAGAGCTCCTTACGCG | + |
|
Preference number: 5 (lower is better) Translates to: FDHSSPDSLLGTQNG*LLGRGPAGHRAPYA Trigger: CGCGTAAGGAGCTCTGTGCCCTGCAGGGCCTCTACCAAGCAGCCAGCCGTTCTGAGTACCTAACAGACTATCTGGAGAACTATGGTCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000177054.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCACTCCAGACCCTGACCAGGCTGTATCAACTTCTGCTCGGCAGCTTTATTGGGCTCACCACATCATaGGGGGACGACGTCCATATG | + |
|
Preference number: 5 (lower is better) Translates to: SSLQTLTRLYQLLLGSFIGLTTS*GDDVHM Trigger: CATATGGACGTCGTCCCCCAATGATGTGGTGAGCCC...AATAAAGCTGCCGAGCAGAAGTTGATACAGCCTGGTCAGGGTCTGGAGTGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CAA 90 bp | GGTGTGGGTGTCCCTGAGAAGCTCAGTCCAGAGGGCCTTTGTCTAAGAGACTCTGGAGCACCAAGATCTTaGGGAACCTCTGGACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GVGVPEKLSPEGLCLRDSGAPRS*GTSGQR Trigger: TCTCTGTCCAGAGGTTCCCAAAGATCTTGGTGCTCC...AGAGTCTCTTAGACAAAGGCCCTCTGGACTGAGCTTCTCAGGGACACCCACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CAA 90 bp | AAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCATCATTTGAATTCTTGGCTTaGTTGAGCAGAAGCCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: KREKPAEEPRMLLTVSASFEFLA*LSRSPT Trigger: CGTGGGGCTTCTGCTCAACAAAGCCAAGAATTCAAA...TGATGCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065461.9 |
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| CDS-3UTR CAA 90 bp | CAAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCATCGCACTCTTTGAATTCTaGGCTTTGTTGAGCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QTREASRGAEDAADCLRIALFEF*ALLSRS Trigger: GCTTCTGCTCAACAAAGCCAAGAATTCAAAGAGTGC...GATGCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065461.9 |
||
| CDS-3UTR CAA 90 bp | ACCACAAGCTTAAAAATGCAAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTCTCTGGATCTGGGTCTaGAACTCAGATGGGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: TTSLKMQTREASRGAEDALWIWV*NSDGLT Trigger: GGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAG...AGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTTGCATTTTTAAGCTTGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CAA 90 bp | GGTGGTGTGGGTGTCCCTGAGAAGCTCAGTCCAGAGGGCCTTTGTCTAAGAGACGTGACACTGGAATCATaGAAAGTGTGCCATTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGVGVPEKLSPEGLCLRDVTLES*KVCHSP Trigger: AGGCGAATGGCACACTTTCAATGATTCCAGTGTCAC...GTCTCTTAGACAAAGGCCCTCTGGACTGAGCTTCTCAGGGACACCCACACCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CAA 90 bp | TGGGCTGACGGTCCTCTCCCACAGACCGCTCTTGTTTTTATTACACACAGGAAAACCCGGTTCACCTCATaGTGGAGACCATCCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WADGPLPQTALVFITHRKTRFTS*WRPSRR Trigger: CCTTCTGGATGGTCTCCACAATGAGGTGAACCGGGT...TTTCCTGTGTGTAATAAAAACAAGAGCGGTCTGTGGGAGAGGACCGTCAGCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CAA 90 bp | AAACGAGAGAAGCCAGCCGAGGAGCCGAGGATGCTGCTGACTGTCTCCGCATCATCCAATATGTCCTCTTaGGTGAAGAGCCTCATACAA | + |
|
Preference number: 5 (lower is better) Translates to: KREKPAEEPRMLLTVSASSNMSS*VKSLIQ Trigger: TTGTATGAGGCTCTTCACCAAAGAGGACATATTGGA...TGATGCGGAGACAGTCAGCAGCATCCTCGGCTCCTCGGCTGGCTTCTCTCGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS-3UTR CAA 90 bp | CTGTACAAGGCTCCACTGTACACTAGACATTCTACTCTTGCTTACATAGTAAACAGAACGGCTGGCTGCTaGGTAGAGGCCCTGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LYKAPLYTRHSTLAYIVNRTAGC*VEALQG Trigger: GCCCTGCAGGGCCTCTACCAAGCAGCCAGCCGTTCT...GTTTACTATGTAAGCAAGAGTAGAATGTCTAGTGTACAGTGGAGCCTTGTACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
||
| CDS-3UTR CAA 90 bp | TCCTCACTCCAGACCCTGACCAGGCTGTATCAACTTCTGCTCGGCAGCTTTATTGTGACACTGGAATCATaGAAAGTGTGCCATTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLQTLTRLYQLLLGSFIVTLES*KVCHSP Trigger: AGGCGAATGGCACACTTTCAATGATTCCAGTGTCAC...AATAAAGCTGCCGAGCAGAAGTTGATACAGCCTGGTCAGGGTCTGGAGTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
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| CDS-3UTR CAA 90 bp | TCCTCACTCCAGACCCTGACCAGGCTGTATCAACTTCTGCTCGGCAGCTTTATTTCCAATATGTCCTCTTaGGTGAAGAGCCTCATACAA | + |
|
Preference number: 5 (lower is better) Translates to: SSLQTLTRLYQLLLGSFISNMSS*VKSLIQ Trigger: TTGTATGAGGCTCTTCACCAAAGAGGACATATTGGA...AATAAAGCTGCCGAGCAGAAGTTGATACAGCCTGGTCAGGGTCTGGAGTGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 |
||
| CDS TCA 90 bp | GAAATTCACAAATGTTGTGAGCTTGCTGGTTCGTATCCTGGATTCTaGGAATCGCTTCAGGTGGAGCACCAAGATCTTTGGGAACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EIHKCCELAGSYPGF*ESLQVEHQDLWEPL Trigger: CAGAGGTTCCCAAAGATCTTGGTGCTCCACCTGAAGCGATTCTCAGAATCCAGGATACGAACCAGCAAGCTCACAACATTTGTGAATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 ENSMUST00000114830.9 ENSMUST00000176416.8 ENSMUST00000177054.8 |
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| CDS-3UTR CAA 90 bp | CTGTACAAGGCTCCACTGTACACTAGACATTCTACTCTTGCTTACATAGTAAACCTCTGGATCTGGGTCTaGAACTCAGATGGGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LYKAPLYTRHSTLAYIVNLWIWV*NSDGLT Trigger: GGTGAGCCCATCTGAGTTCAAGACCCAGATCCAGAG...GTTTACTATGTAAGCAAGAGTAGAATGTCTAGTGTACAGTGGAGCCTTGTACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034508.14 |
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| CDS GCA 72 bp | GGTAGAGGCCCTGCAGGGCACAGAGCTCCTTACGCGTaGGGGCCAGCATGGGGCTGCGACCCAGGTTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GRGPAGHRAPYA*GPAWGCDPGFQ Trigger: CTGGAAACCTGGGTCGCAGCCCCATGCTGGCCCGCACGCGTAAGGAGCTCTGTGCCCTGCAGGGCCTCTACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000177054.8 |
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| CDS TCA 72 bp | CACGGGTCTGGCTCTCTGACCGCTTACTACTCCCAATaGTGTCAGATCTCAGCAGGGGGCGGCCCCTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: HGSGSLTAYYSQ*CQISAGGGPCH Trigger: GTGACAGGGGCCGCCCCCTGCTGAGATCTGACATCATTGGGAGTAGTAAGCGGTCAGAGAGCCAGACCCGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000176671.2 ENSMUST00000177054.8 |
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| CDS CCA 72 bp | GTCCGGAGGCTGGAGAAATCCCGGGCCAGGTCTGATTaGCTGTTCGATTTCTTCTGGCTCAGGGTCACCCCC | + |
|
Preference number: 6 (lower is better) Translates to: VRRLEKSRARSD*LFDFFWLRVTP Trigger: GGGGGTGACCCTGAGCCAGAAGAAATCGAACAGCCAATCAGACCTGGCCCGGGATTTCTCCAGCCTCCGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000176671.2 ENSMUST00000177054.8 |
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| CDS CCA 72 bp | GAAGACCAGCCAGACCCTGGGCACTCTTTGAATTCATaGTGTCTCGCCCTGGAGAACTGGAGCGGCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: EDQPDPGHSLNS*CLALENWSGWA Trigger: GGCCCAGCCGCTCCAGTTCTCCAGGGCGAGACACCATGAATTCAAAGAGTGCCCAGGGTCTGGCTGGTCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000177054.8 |
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| CDS GCA 72 bp | TCGGGAGGGAGGAGGGGCTTGCGTGAGCACCTGTGGTaGACTGCCCTTTCGACCATAGTTCTCCAGATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SGGRRGLREHLW*TALSTIVLQIV Trigger: GACTATCTGGAGAACTATGGTCGAAAGGGCAGTGCACCACAGGTGCTCACGCAAGCCCCTCCTCCCTCCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000177054.8 |
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| CDS CCA 72 bp | GACTCGGGAGGGAGGAGGGGCTTGCGTGAGCACCTGTaGTGCACTGCCCTTTCGACCATAGTTCTCCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: DSGGRRGLREHL*CTALSTIVLQI Trigger: TATCTGGAGAACTATGGTCGAAAGGGCAGTGCACCACAGGTGCTCACGCAAGCCCCTCCTCCCTCCCGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000177054.8 |
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| CDS CCA 72 bp | GCCCTTGCTCTTCTCCCACAGTGTGTAACGGCCACTTaGTCGGTAGGTGGGACTGAGGACTTCAGGGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: ALALLPQCVTAT*SVGGTEDFRDS Trigger: CGAGTCCCTGAAGTCCTCAGTCCCACCTACCGACCAAGTGGCCGTTACACACTGTGGGAGAAGAGCAAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000177054.8 |
||
| CDS CCA 72 bp | TCCCGGGCCAGGTCTGATTGGCTGTTCGATTTCTTCTaGCTCAGGGTCACCCCCTGGTCTCTGGCATTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SRARSDWLFDFF*LRVTPWSLAFM Trigger: CATGAATGCCAGAGACCAGGGGGTGACCCTGAGCCAGAAGAAATCGAACAGCCAATCAGACCTGGCCCGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000176671.2 ENSMUST00000177054.8 |
||
| CDS CCA 72 bp | CATCTGAAGTCCGGTAGCCATCTGAAGTCCGGAGGCTaGAGAAATCCCGGGCCAGGTCTGATTGGCTGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: HLKSGSHLKSGG*RNPGPGLIGCS Trigger: CGAACAGCCAATCAGACCTGGCCCGGGATTTCTCCAGCCTCCGGACTTCAGATGGCTACCGGACTTCAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000176671.2 ENSMUST00000177054.8 |
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| CDS CCA 72 bp | CACGTGTTCCCAAGGTTTCGAAGACCAGCCAGACCCTaGGCACTCTTTGAATTCCCCTGTGCCCGAGACGAC | + |
|
Preference number: 6 (lower is better) Translates to: HVFPRFRRPARP*ALFEFPCARDD Trigger: GTCGTCTCGGGCACAGGGGAATTCAAAGAGTGCCCAGGGTCTGGCTGGTCTTCGAAACCTTGGGAACACGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
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| CDS CAA 90 bp | GAAAATCCACTGCCTCCGTTGAGTCCACTGCCCGAGGGCCTTTCATaGCCACGGGTCTGGCTCTCTGACCGCTTACTACTCCCAATGATG | + |
|
Preference number: 6 (lower is better) Translates to: ENPLPPLSPLPEGLS*PRVWLSDRLLLPMM Trigger: CATCATTGGGAGTAGTAAGCGGTCAGAGAGCCAGACCCGTGGCAATGAAAGGCCCTCGGGCAGTGGACTCAACGGAGGCAGTGGATTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000176671.2 ENSMUST00000177054.8 |
||
| CDS TCA 72 bp | GCCCGAGGGCCTTTCATTGCCACGGGTCTGGCTCTCTaGCCGCTTACTACTCCCAATGATGTCAGATCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ARGPFIATGLAL*PLTTPNDVRSQ Trigger: CTGAGATCTGACATCATTGGGAGTAGTAAGCGGTCAGAGAGCCAGACCCGTGGCAATGAAAGGCCCTCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000176671.2 ENSMUST00000177054.8 |
||
| CDS CCA 72 bp | CATAGGAAGAAGGGGTGTAGGTGCCATAGCCCGGTTTaGCATAGGGGGCATCTGTGTAGCGGGACGATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HRKKGCRCHSPV*HRGHLCSGTIL Trigger: CAGAATCGTCCCGCTACACAGATGCCCCCTATGCCAAACCGGGCTATGGCACCTACACCCCTTCTTCCTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000176671.2 ENSMUST00000177054.8 |
||
| CDS TCA 72 bp | AAGGTTTCGAAGACCAGCCAGACCCTGGGCACTCTTTaGATTCATGGTGTCTCGCCCTGGAGAACTGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: KVSKTSQTLGTL*IHGVSPWRTGA Trigger: CGCTCCAGTTCTCCAGGGCGAGACACCATGAATTCAAAGAGTGCCCAGGGTCTGGCTGGTCTTCGAAACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000177054.8 |
||
| CDS CCA 72 bp | AGTTCTCCAGATAGTCTGTTAGGTACTCAGAACGGCTaGCTGCTTGGTAGAGGCCCTGCAGGGCACAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSPDSLLGTQNG*LLGRGPAGHRA Trigger: AGCTCTGTGCCCTGCAGGGCCTCTACCAAGCAGCCAGCCGTTCTGAGTACCTAACAGACTATCTGGAGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000177054.8 |
||
| CDS CCA 72 bp | CACGTGTTCCCAAGGTTTCGAAGACCAGCCAGACCCTaGGCACTCTTTGAATTCATGGTGTCTCGCCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HVFPRFRRPARP*ALFEFMVSRPG Trigger: TCCAGGGCGAGACACCATGAATTCAAAGAGTGCCCAGGGTCTGGCTGGTCTTCGAAACCTTGGGAACACGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034508.14 ENSMUST00000114830.9 ENSMUST00000177054.8 |
||
| CDS TCA 72 bp | AAGGTTTCGAAGACCAGCCAGACCCTGGGCACTCTTTaGATTCCCCTGTGCCCGAGACGACATCGGTCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: KVSKTSQTLGTL*IPLCPRRHRSK Trigger: TTTAGACCGATGTCGTCTCGGGCACAGGGGAATTCAAAGAGTGCCCAGGGTCTGGCTGGTCTTCGAAACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175816.2 |
||
| CDS CAA 90 bp | ACTGGCCAGTTCATAGAAGAGCAAATAGGCGTCGCTGGTGCGCACTaGGCTGGAGGACATGGGTGTGACACTGGAATCATTGAAAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TGQFIEEQIGVAGAH*AGGHGCDTGIIESV Trigger: CACACTTTCAATGATTCCAGTGTCACACCCATGTCCTCCAGCCAAGTGCGCACCAGCGACGCCTATTTGCTCTTCTATGAACTGGCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 ENSMUST00000114830.9 ENSMUST00000176416.8 ENSMUST00000177054.8 |
||
| CDS CCA 72 bp | CTGGTTCGTATCCTGGATTCTGAGAATCGCTTCAGGTaGAGCACCAAGATCTTTGGGAACCTCTGGACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LVRILDSENRFR*STKIFGNLWTE Trigger: CTCTGTCCAGAGGTTCCCAAAGATCTTGGTGCTCCACCTGAAGCGATTCTCAGAATCCAGGATACGAACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 ENSMUST00000114830.9 ENSMUST00000176416.8 ENSMUST00000177054.8 |
||
| CDS CCA 72 bp | CACGTGTTCCCAAGGTTTCGAAGACCAGCCAGACCCTaGGCACTCTTTGAATTCTTGGCTTTGTTGAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HVFPRFRRPARP*ALFEFLALLSR Trigger: TCTGCTCAACAAAGCCAAGAATTCAAAGAGTGCCCAGGGTCTGGCTGGTCTTCGAAACCTTGGGAACACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065461.9 |
||
| CDS CAA 72 bp | TTCATAGAAGAGCAAATAGGCGTCGCTGGTGCGCACTaGGCTGGAGGACATGGGTGTGACACTGGAATCATT | + |
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Preference number: 6 (lower is better) Translates to: FIEEQIGVAGAH*AGGHGCDTGII Trigger: AATGATTCCAGTGTCACACCCATGTCCTCCAGCCAAGTGCGCACCAGCGACGCCTATTTGCTCTTCTATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 ENSMUST00000114830.9 ENSMUST00000176416.8 ENSMUST00000177054.8 |
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| CDS CCA 72 bp | TATGCATCGTTTTCTGGCTCGGCAGCGGCAGCAAGTTaGCTTCTCATCACCATCCAATATGTCCTCTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: YASFSGSAAAAS*LLITIQYVLFG Trigger: ACCAAAGAGGACATATTGGATGGTGATGAGAAGCCAACTTGCTGCCGCTGCCGAGCCAGAAAACGATGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 ENSMUST00000114830.9 ENSMUST00000176416.8 ENSMUST00000177054.8 |
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| CDS TCA 72 bp | AAATGTTGTGAGCTTGCTGGTTCGTATCCTGGATTCTaGGAATCGCTTCAGGTGGAGCACCAAGATCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: KCCELAGSYPGF*ESLQVEHQDLW Trigger: CCAAAGATCTTGGTGCTCCACCTGAAGCGATTCTCAGAATCCAGGATACGAACCAGCAAGCTCACAACATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 ENSMUST00000114830.9 ENSMUST00000176416.8 ENSMUST00000177054.8 |
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| CDS CAA 72 bp | AGGTCTCTTAGTGGGAAATTCACAAATGTTGTGAGCTaGCTGGTTCGTATCCTGGATTCTGAGAATCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RSLSGKFTNVVS*LVRILDSENRF Trigger: GAAGCGATTCTCAGAATCCAGGATACGAACCAGCAAGCTCACAACATTTGTGAATTTCCCACTAAGAGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034508.14 ENSMUST00000065461.9 ENSMUST00000114830.9 ENSMUST00000176416.8 ENSMUST00000177054.8 |
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