Pregenerated sensors for USP17LA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054568Ensembl transcript IDs: ENSMUST00000067695.8
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCATCATTGGGAAGAGAGGCCCTTTGGTATTGCAAACTTTATATaGCCCAGTACAGGGAAATGCCAGAGCCAAGAAGTGGGAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: GHHWEERPFGIANFI*PSTGKCQSQEVGVG Trigger: ACCCACTCCCACTTCTTGGCTCTGGCATTTCCCTGTACTGGGGCATATAAAGTTTGCAATACCAAAGGGCCTCTCTTCCCAATGATGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR TCA 90 bp | CCAGTGTGTTTTCTTAGGGTCTCTAGCTGCATATGTAGCAGAAGGTaGCCTAGTTGGCCATCATTGGGAAGAGAGGCCCTTTGGTATTGC | + |
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Preference number: 1 (lower is better) Translates to: PVCFLRVSSCICSRR*PSWPSLGREALWYC Trigger: GCAATACCAAAGGGCCTCTCTTCCCAATGATGGCCAACTAGGTCACCTTCTGCTACATATGCAGCTAGAGACCCTAAGAAAACACACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR TCA 90 bp | ACTGTTGATCACACACTAAGAATAAGAGCATCTATCTCTACAGGGTaGACTACACATTTTCTGGGTAAGAGGTTAGAAAGGGCAGTTGAA | + |
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Preference number: 1 (lower is better) Translates to: TVDHTLRIRASISTG*TTHFLGKRLERAVE Trigger: TTCAACTGCCCTTTCTAACCTCTTACCCAGAAAATGTGTAGTTCACCCTGTAGAGATAGATGCTCTTATTCTTAGTGTGTGATCAACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR CAA 90 bp | GCAAGGGCCCAGAGGATAGGTGGACCCCACGTGAAGGGTGAGGCATaGTCCCTGCCTGAAACAGAGATCCAAACCTCTTGTTCCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: ARAQRIGGPHVKGEA*SLPETEIQTSCSRH Trigger: GTGCCTGGAACAAGAGGTTTGGATCTCTGTTTCAGGCAGGGACAATGCCTCACCCTTCACGTGGGGTCCACCTATCCTCTGGGCCCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR CAA 90 bp | TGTCCCTGCCTGAAACAGAGATCCAAACCTCTTGTTCCAGGCACCTaGGGTCAACAGTGTGTCCACAGGAGCCTGTGTGAGTGGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: CPCLKQRSKPLVPGT*GQQCVHRSLCEWVG Trigger: ACCCACCCACTCACACAGGCTCCTGTGGACACACTGTTGACCCAAGGTGCCTGGAACAAGAGGTTTGGATCTCTGTTTCAGGCAGGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR-3UTR CCA 90 bp | CGAAAACTCCAAACCTCAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCAGTGGGTGGGTAGGGTaGCAGAGTTGGGGGAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: RKLQTSRVPVCFLRVSSCSGWVG*QSWGRV Trigger: TACCCTCCCCCAACTCTGCCACCCTACCCACCCACT...GCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTGAGGTTTGGAGTTTTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR-3UTR CCA 90 bp | CGAAAACTCCAAACCTCAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCAGAAGTGGGAGTGGGTaGGTAGGGTGGCAGAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: RKLQTSRVPVCFLRVSSCRSGSG*VGWQSW Trigger: CCAACTCTGCCACCCTACCCACCCACTCCCACTTCT...GCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTGAGGTTTGGAGTTTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTTGAAAAGCAACTTGTTGCCTGAGCGAAAACTCCAAACCTCAAGAGTTCCACCCAGTACAGGGAAATaGCAGAGCCAAGAAGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: QLKSNLLPERKLQTSRVPPSTGK*QSQEVG Trigger: TCCCACTTCTTGGCTCTGGCATTTCCCTGTACTGGG...TGGAACTCTTGAGGTTTGGAGTTTTCGCTCAGGCAACAAGTTGCTTTTCAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCATATGTAGCAGAAGGTCTAGTTGGCCATCATTaGGAAGAGAGGCCCTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: QEFQCVFLGSLAAYVAEGLVGHH*EERPFG Trigger: ACCAAAGGGCCTCTCTTCCCAATGATGGCCAACTAG...ACCTTCTGCTACATATGCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTCCACATTCAAACAATCAGAGAGTCAGTCAGCAAAAACAGGCAAGGGCCCAGTGAGGCATTGTCCCTaGCTGAAACAGAGATCCAAA | + |
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Preference number: 2 (lower is better) Translates to: FSTFKQSESQSAKTGKGPVRHCP*LKQRSK Trigger: TTTGGATCTCTGTTTCAGGCAGGGACAATGCCTCAC...TGGGCCCTTGCCTGTTTTTGCTGACTGACTCTCTGATTGTTTGAATGTGGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCATATGTAGCAGAAGGTGAGGCCCTTTGGTATTaGAAACTTTATATGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: QEFQCVFLGSLAAYVAEGEALWY*KLYMPQ Trigger: CTGGGGCATATAAAGTTTGCAATACCAAAGGGCCTC...ACCTTCTGCTACATATGCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR-3UTR GCA 90 bp | CGAAAACTCCAAACCTCAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCATTGCAAACTTTATATaGCCCAGTACAGGGAAATGC | + |
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Preference number: 2 (lower is better) Translates to: RKLQTSRVPVCFLRVSSCIANFI*PSTGKC Trigger: GCATTTCCCTGTACTGGGGCATATAAAGTTTGCAAT...GCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTGAGGTTTGGAGTTTTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR-3UTR CAA 90 bp | TTCAAACAATCAGAGAGTCAGTCAGCAAAAACAGGCAAGGGCCCAGAGGATAGGCTTGTTCCAGGCACCTaGGGTCAACAGTGTGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: FKQSESQSAKTGKGPEDRLVPGT*GQQCVH Trigger: GTGGACACACTGTTGACCCAAGGTGCCTGGAACAAG...CCTATCCTCTGGGCCCTTGCCTGTTTTTGCTGACTGACTCTCTGATTGTTTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCATATGTAGCAGAAGGTGGTAGGGTGGCAGAGTaGGGGGAGGGTATAGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: QEFQCVFLGSLAAYVAEGGRVAE*GEGIGN Trigger: GTTCCCTATACCCTCCCCCAACTCTGCCACCCTACC...ACCTTCTGCTACATATGCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR TCA 72 bp | TTTCTTAGGGTCTCTAGCTGCATATGTAGCAGAAGGTaGCCTAGTTGGCCATCATTGGGAAGAGAGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: FLRVSSCICSRR*PSWPSLGREAL Trigger: AAGGGCCTCTCTTCCCAATGATGGCCAACTAGGTCACCTTCTGCTACATATGCAGCTAGAGACCCTAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR GCA 72 bp | TGGGAAGAGAGGCCCTTTGGTATTGCAAACTTTATATaGCCCAGTACAGGGAAATGCCAGAGCCAAGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: WEERPFGIANFI*PSTGKCQSQEV Trigger: CACTTCTTGGCTCTGGCATTTCCCTGTACTGGGGCATATAAAGTTTGCAATACCAAAGGGCCTCTCTTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR GCA 72 bp | AGTTGGCCATCATTGGGAAGAGAGGCCCTTTGGTATTaGAAACTTTATATGCCCCAGTACAGGGAAATGCCA | + |
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Preference number: 3 (lower is better) Translates to: SWPSLGREALWY*KLYMPQYREMP Trigger: TGGCATTTCCCTGTACTGGGGCATATAAAGTTTGCAATACCAAAGGGCCTCTCTTCCCAATGATGGCCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR TCA 72 bp | CACACACTAAGAATAAGAGCATCTATCTCTACAGGGTaGACTACACATTTTCTGGGTAAGAGGTTAGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: HTLRIRASISTG*TTHFLGKRLER Trigger: CCTTTCTAACCTCTTACCCAGAAAATGTGTAGTTCACCCTGTAGAGATAGATGCTCTTATTCTTAGTGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR TCA 90 bp | GCACCTTGGGTCAACAGTGTGTCCACAGGAGCCTGTGTGAGTGGGTGGGTGATCTATGTCATGAATGGGTaGGCTGTCCTCAGAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: APWVNSVSTGACVSGWVIYVMNG*AVLRGG Trigger: CCCACCTCTGAGGACAGCTCACCCATTCATGACATA...GATCACCCACCCACTCACACAGGCTCCTGTGGACACACTGTTGACCCAAGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR GCA 90 bp | GCACCTTGGGTCAACAGTGTGTCCACAGGAGCCTGTGTGAGTGGGTGGGTGATCAGAAGCCTCTGCCCTTaGTTGTTCTTGTTCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: APWVNSVSTGACVSGWVIRSLCP*LFLFCP Trigger: GGGGCAGAACAAGAACAAGCAAGGGCAGAGGCTTCT...GATCACCCACCCACTCACACAGGCTCCTGTGGACACACTGTTGACCCAAGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR CCA 90 bp | GCACCTTGGGTCAACAGTGTGTCCACAGGAGCCTGTGTGAGTGGGTGGGTGATCTCCTGCTGGTGCTTGTaGAAGGCAGAGGTCAAAATA | + |
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Preference number: 4 (lower is better) Translates to: APWVNSVSTGACVSGWVISCWCL*KAEVKI Trigger: TATTTTGACCTCTGCCTTCCACAAGCACCAGCAGGA...GATCACCCACCCACTCACACAGGCTCCTGTGGACACACTGTTGACCCAAGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR TCA 90 bp | GCACCTTGGGTCAACAGTGTGTCCACAGGAGCCTGTGTGAGTGGGTGGGTGATCTCTGTTTCTGAGGCATaGGTTTGGTATTCCCGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: APWVNSVSTGACVSGWVISVSEA*VWYSRV Trigger: AACACGGGAATACCAAACTCATGCCTCAGAAACAGA...GATCACCCACCCACTCACACAGGCTCCTGTGGACACACTGTTGACCCAAGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR CAA 72 bp | CTGAAACAGAGATCCAAACCTCTTGTTCCAGGCACCTaGGGTCAACAGTGTGTCCACAGGAGCCTGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LKQRSKPLVPGT*GQQCVHRSLCE Trigger: CTCACACAGGCTCCTGTGGACACACTGTTGACCCAAGGTGCCTGGAACAAGAGGTTTGGATCTCTGTTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR TCA 90 bp | TTCAAACAATCAGAGAGTCAGTCAGCAAAAACAGGCAAGGGCCCAGAGGATAGGGGGGAACAACAGGTTTaGCTGTGCTCCTGGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: FKQSESQSAKTGKGPEDRGEQQV*LCSWDS Trigger: GCTGTCCCAGGAGCACAGTCAAACCTGTTGTTCCCC...CCTATCCTCTGGGCCCTTGCCTGTTTTTGCTGACTGACTCTCTGATTGTTTGAA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR GCA 90 bp | GACCTCCTCCGGGTGTCCAGCTTCTTGTCTTTAACCTGTACCAACATCCTGGGCACAAGCAGAAGCCTCTaGCCTTGCTTGTTCTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: DLLRVSSFLSLTCTNILGTSRSL*PCLFLF Trigger: GAACAAGAACAAGCAAGGGCAGAGGCTTCTGCTTGT...GCCCAGGATGTTGGTACAGGTTAAAGACAAGAAGCTGGACACCCGGAGGAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR CCA 90 bp | GACCTCCTCCGGGTGTCCAGCTTCTTGTCTTTAACCTGTACCAACATCCTGGGCAGCTGTCCTCAGAGGTaGGTTTTGATTGTCTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: DLLRVSSFLSLTCTNILGSCPQR*VLIVCA Trigger: TGCACAGACAATCAAAACCCACCTCTGAGGACAGCT...GCCCAGGATGTTGGTACAGGTTAAAGACAAGAAGCTGGACACCCGGAGGAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR TCA 90 bp | CAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCATATGTAGCAGAAGGTCAGGGCCCTGAGAGGTaGGGAGCCTGTCAGCATTGT | + |
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Preference number: 4 (lower is better) Translates to: QEFQCVFLGSLAAYVAEGQGPER*GACQHC Trigger: ACAATGCTGACAGGCTCCTCACCTCTCAGGGCCCTG...ACCTTCTGCTACATATGCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR CCA 90 bp | GCACCTTGGGTCAACAGTGTGTCCACAGGAGCCTGTGTGAGTGGGTGGGTGATCATTTATTCTTCCCTCTaGCATGTCAATACTGACCTG | + |
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Preference number: 4 (lower is better) Translates to: APWVNSVSTGACVSGWVIIYSSL*HVNTDL Trigger: CAGGTCAGTATTGACATGCCAGAGGGAAGAATAAAT...GATCACCCACCCACTCACACAGGCTCCTGTGGACACACTGTTGACCCAAGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| 3UTR CAA 72 bp | GGTGATTTAGTCTCTATGCTGCTCAGATTCCATGAGTaGCAGGAGAGGCTATTCAGACCTCCTCCGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: GDLVSMLLRFHE*QERLFRPPPGV Trigger: GACACCCGGAGGAGGTCTGAATAGCCTCTCCTGCAACTCATGGAATCTGAGCAGCATAGAGACTAAATCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR GCA 90 bp | CAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCATATGTAGCAGAAGGTATCCCTGCCCCAGTTTaGAGTGGATCTGGGCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: QEFQCVFLGSLAAYVAEGIPAPV*SGSGLV Trigger: CACCAGCCCAGATCCACTGCAAACTGGGGCAGGGAT...ACCTTCTGCTACATATGCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR CCA 90 bp | TTCAAACAATCAGAGAGTCAGTCAGCAAAAACAGGCAAGGGCCCAGAGGATAGGTGCCCCAGTTTGCAGTaGATCTGGGCTGGTGAATCA | + |
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Preference number: 4 (lower is better) Translates to: FKQSESQSAKTGKGPEDRCPSLQ*IWAGES Trigger: TGATTCACCAGCCCAGATCCACTGCAAACTGGGGCA...CCTATCCTCTGGGCCCTTGCCTGTTTTTGCTGACTGACTCTCTGATTGTTTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR TCA 90 bp | CAGTTGAAAAGCAACTTGTTGCCTGAGCGAAAACTCCAAACCTCAAGAGTTCCAGGCAAAGGAGACACTTaGTCTGAGACCTCCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: QLKSNLLPERKLQTSRVPGKGDT*SETSTS Trigger: GCTGGTGGAGGTCTCAGATCAAGTGTCTCCTTTGCC...TGGAACTCTTGAGGTTTGGAGTTTTCGCTCAGGCAACAAGTTGCTTTTCAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR GCA 90 bp | CAGTTGAAAAGCAACTTGTTGCCTGAGCGAAAACTCCAAACCTCAAGAGTTCCAGCATCTTCCTGCTGGTaGTTGTGGAAGGCAGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: QLKSNLLPERKLQTSRVPASSCW*LWKAEV Trigger: GACCTCTGCCTTCCACAAGCACCAGCAGGAAGATGC...TGGAACTCTTGAGGTTTGGAGTTTTCGCTCAGGCAACAAGTTGCTTTTCAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR GCA 90 bp | CAGTTGAAAAGCAACTTGTTGCCTGAGCGAAAACTCCAAACCTCAAGAGTTCCACAAGCACTGCAGGGCTaGATTCAGGTAGCAGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: QLKSNLLPERKLQTSRVPQALQG*IQVAAV Trigger: AACAGCTGCTACCTGAATGCAGCCCTGCAGTGCTTG...TGGAACTCTTGAGGTTTGGAGTTTTCGCTCAGGCAACAAGTTGCTTTTCAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR CCA 90 bp | CAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCATATGTAGCAGAAGGTGGCTGGATCTGCTTCTaGGAAGGAAAGAGCAACCAC | + |
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Preference number: 4 (lower is better) Translates to: QEFQCVFLGSLAAYVAEGGWICF*EGKSNH Trigger: GTGGTTGCTCTTTCCTTCCCAGAAGCAGATCCAGCC...ACCTTCTGCTACATATGCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR TCA 90 bp | TTCAAACAATCAGAGAGTCAGTCAGCAAAAACAGGCAAGGGCCCAGAGGATAGGTCCCATGACCAGCTTTaGCACAACAGAAGTAATGTC | + |
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Preference number: 4 (lower is better) Translates to: FKQSESQSAKTGKGPEDRSHDQL*HNRSNV Trigger: GACATTACTTCTGTTGTGTCAAAGCTGGTCATGGGA...CCTATCCTCTGGGCCCTTGCCTGTTTTTGCTGACTGACTCTCTGATTGTTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR GCA 90 bp | TTCAAACAATCAGAGAGTCAGTCAGCAAAAACAGGCAAGGGCCCAGAGGATAGGTCCCAACTCAGACTGTaGTTTCCATTGACAGTTAGC | + |
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Preference number: 4 (lower is better) Translates to: FKQSESQSAKTGKGPEDRSQLRL*FPLTVS Trigger: GCTAACTGTCAATGGAAAGCACAGTCTGAGTTGGGA...CCTATCCTCTGGGCCCTTGCCTGTTTTTGCTGACTGACTCTCTGATTGTTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR CCA 90 bp | CGAAAACTCCAAACCTCAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCGTATCTGAGGTACCCTaGCAAAGGAGACACTTGATC | + |
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Preference number: 4 (lower is better) Translates to: RKLQTSRVPVCFLRVSSCVSEVP*QRRHLI Trigger: GATCAAGTGTCTCCTTTGCCAGGGTACCTCAGATAC...GCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTGAGGTTTGGAGTTTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR CCA 90 bp | TTCAAACAATCAGAGAGTCAGTCAGCAAAAACAGGCAAGGGCCCAGAGGATAGGCGTGATTTCTTCAGCTaGTATTCAGGGTCAAGAACC | + |
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Preference number: 4 (lower is better) Translates to: FKQSESQSAKTGKGPEDRRDFFS*YSGSRT Trigger: GGTTCTTGACCCTGAATACCAGCTGAAGAAATCACG...CCTATCCTCTGGGCCCTTGCCTGTTTTTGCTGACTGACTCTCTGATTGTTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR TCA 90 bp | CGAAAACTCCAAACCTCAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCGATTGTCTGTGCACTTaGAGGCAGGATTCATGCATT | + |
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Preference number: 4 (lower is better) Translates to: RKLQTSRVPVCFLRVSSCDCLCT*RQDSCI Trigger: AATGCATGAATCCTGCCTTCAAGTGCACAGACAATC...GCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTGAGGTTTGGAGTTTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR TCA 90 bp | TTTTCCACATTCAAACAATCAGAGAGTCAGTCAGCAAAAACAGGCAAGGGCCCACTCAGAGGTGGGTTTTaGTTGTCTGTGCACTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: FSTFKQSESQSAKTGKGPLRGGF*LSVHLK Trigger: CTTCAAGTGCACAGACAATCAAAACCCACCTCTGAG...TGGGCCCTTGCCTGTTTTTGCTGACTGACTCTCTGATTGTTTGAATGTGGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR TCA 90 bp | TTTTCCACATTCAAACAATCAGAGAGTCAGTCAGCAAAAACAGGCAAGGGCCCATTGTACCACTTCCCATaGCCAGCTTTGACACAACAG | + |
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Preference number: 4 (lower is better) Translates to: FSTFKQSESQSAKTGKGPLYHFP*PALTQQ Trigger: CTGTTGTGTCAAAGCTGGTCATGGGAAGTGGTACAA...TGGGCCCTTGCCTGTTTTTGCTGACTGACTCTCTGATTGTTTGAATGTGGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR TCA 90 bp | CAGTTGAAAAGCAACTTGTTGCCTGAGCGAAAACTCCAAACCTCAAGAGTTCCATTGTGGTTCACTTCCTaGAGCACTTTCCCCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: QLKSNLLPERKLQTSRVPLWFTS*STFPFP Trigger: AGGAAAGGGGAAAGTGCTTCAGGAAGTGAACCACAA...TGGAACTCTTGAGGTTTGGAGTTTTCGCTCAGGCAACAAGTTGCTTTTCAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR TCA 90 bp | CAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCATATGTAGCAGAAGGTCAACTTCAGTATTCCTaGGGTTCTGCCCAGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: QEFQCVFLGSLAAYVAEGQLQYS*GSAQLS Trigger: AGAAAGCTGGGCAGAACCTCAGGAATACTGAAGTTG...ACCTTCTGCTACATATGCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR CCA 90 bp | CGAAAACTCCAAACCTCAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCCAACTTACAGCCTTCTaGGGAACAACAGGTTTGACT | + |
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Preference number: 4 (lower is better) Translates to: RKLQTSRVPVCFLRVSSCQLTAF*GTTGLT Trigger: AGTCAAACCTGTTGTTCCCCAGAAGGCTGTAAGTTG...GCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTGAGGTTTGGAGTTTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR TCA 90 bp | CGAAAACTCCAAACCTCAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCACCTTTGGAGCAATATaGACATGCAGGGTCTTAGAA | + |
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Preference number: 4 (lower is better) Translates to: RKLQTSRVPVCFLRVSSCTFGAI*TCRVLE Trigger: TTCTAAGACCCTGCATGTTCATATTGCTCCAAAGGT...GCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTGAGGTTTGGAGTTTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR TCA 90 bp | CAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCATATGTAGCAGAAGGTTGGTGGTTCTGTTTCTaGGGCATGAGTTTGGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: QEFQCVFLGSLAAYVAEGWWFCF*GMSLVF Trigger: GAATACCAAACTCATGCCTCAGAAACAGAACCACCA...ACCTTCTGCTACATATGCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR GCA 90 bp | CAAGAGTTCCAGTGTGTTTTCTTAGGGTCTCTAGCTGCATATGTAGCAGAAGGTTGCTTGTTCTTGTTCTaGCCCTTCTTCGATCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QEFQCVFLGSLAAYVAEGCLFLF*PFFDLR Trigger: ACGAAGATCGAAGAAGGGGCAGAACAAGAACAAGCA...ACCTTCTGCTACATATGCAGCTAGAGACCCTAAGAAAACACACTGGAACTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR CCA 90 bp | TTTTCCACATTCAAACAATCAGAGAGTCAGTCAGCAAAAACAGGCAAGGGCCCAAGTTTGCAGTGGATCTaGGCTGGTGAATCACAATTG | + |
|
Preference number: 4 (lower is better) Translates to: FSTFKQSESQSAKTGKGPSLQWI*AGESQL Trigger: CAATTGTGATTCACCAGCCCAGATCCACTGCAAACT...TGGGCCCTTGCCTGTTTTTGCTGACTGACTCTCTGATTGTTTGAATGTGGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR TCA 90 bp | TTCAAACAATCAGAGAGTCAGTCAGCAAAAACAGGCAAGGGCCCAGAGGATAGGCTCCTAAATCTTCTGTaGAAGGGCTTTTCTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FKQSESQSAKTGKGPEDRLLNLL*KGFSSY Trigger: ATAAGAAGAAAAGCCCTTTCACAGAAGATTTAGGAG...CCTATCCTCTGGGCCCTTGCCTGTTTTTGCTGACTGACTCTCTGATTGTTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR CCA 90 bp | CAGTTGAAAAGCAACTTGTTGCCTGAGCGAAAACTCCAAACCTCAAGAGTTCCATACCATGAGTACCTTTaGAGCAATATGAACATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLKSNLLPERKLQTSRVPYHEYL*SNMNMQ Trigger: CTGCATGTTCATATTGCTCCAAAGGTACTCATGGTA...TGGAACTCTTGAGGTTTGGAGTTTTCGCTCAGGCAACAAGTTGCTTTTCAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR TCA 90 bp | TTTTCCACATTCAAACAATCAGAGAGTCAGTCAGCAAAAACAGGCAAGGGCCCAGATTTAACACTACCATaGGTACCTTTGGAGCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: FSTFKQSESQSAKTGKGPDLTLP*VPLEQY Trigger: ATATTGCTCCAAAGGTACTCATGGTAGTGTTAAATC...TGGGCCCTTGCCTGTTTTTGCTGACTGACTCTCTGATTGTTTGAATGTGGAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTGAAAAGCAACTTGTTGCCTGAGCGAAAACTCCAAACCTCAAGAGTTCCAGGAGGTTTCTTTAATTaGTCTCTTATCCCTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLKSNLLPERKLQTSRVPGGFFN*SLIPVF Trigger: GAAAACAGGGATAAGAGAGCAATTAAAGAAACCTCC...TGGAACTCTTGAGGTTTGGAGTTTTCGCTCAGGCAACAAGTTGCTTTTCAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS-3UTR CAA 90 bp | GCACCTTGGGTCAACAGTGTGTCCACAGGAGCCTGTGTGAGTGGGTGGGTGATCCAGAAGCCTCTGCCCTaGCTTGTTCTTGTTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: APWVNSVSTGACVSGWVIQKPLP*LVLVLP Trigger: GGGCAGAACAAGAACAAGCAAGGGCAGAGGCTTCTG...GATCACCCACCCACTCACACAGGCTCCTGTGGACACACTGTTGACCCAAGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS TCA 90 bp | GCTGGTGCTTGTGGAAGGCAGAGGTCAAAATATGGGAGGGCTTCATaGCATCCCCCGAGTGAGAGTGCAGGAGACTCTGGGTCACAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGACGRQRSKYGRAS*HPPSESAGDSGSQG Trigger: CCCTTGTGACCCAGAGTCTCCTGCACTCTCACTCGGGGGATGTCATGAAGCCCTCCCATATTTTGACCTCTGCCTTCCACAAGCACCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS CCA 90 bp | TGCATTCAGGTAGCAGCTGTTGCCTGTGTTCTGGAGCCCGCATCCTaGTCCTTGGGGACTCTCCCAACTCAGACTGTGCTTTCCATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: CIQVAAVACVLEPAS*SLGTLPTQTVLSID Trigger: GTCAATGGAAAGCACAGTCTGAGTTGGGAGAGTCCCCAAGGACCAGGATGCGGGCTCCAGAACACAGGCAACAGCTGCTACCTGAATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS TCA 90 bp | CTTCCTGTCTACAGAGCTGCCAAGTGTTCACAGGGCCCTGAGAGGTaGGGAGCCTGTCAGCATTGTGCAAGGGTTGATTCTCCTTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPVYRAAKCSQGPER*GACQHCARVDSPCL Trigger: CAGACAAGGAGAATCAACCCTTGCACAATGCTGACAGGCTCCTCACCTCTCAGGGCCCTGTGAACACTTGGCAGCTCTGTAGACAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS CCA 90 bp | GGTGAGGAGCCTGTCAGCATTGTGCAAGGGTTGATTCTCCTTGTCTaGAGAATCCCTGCCCCAGTTTGCAGTGGATCTGGGCTGGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GEEPVSIVQGLILLV*RIPAPVCSGSGLVN Trigger: ATTCACCAGCCCAGATCCACTGCAAACTGGGGCAGGGATTCTCCAGACAAGGAGAATCAACCCTTGCACAATGCTGACAGGCTCCTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR CAA 90 bp | GCACCTTGGGTCAACAGTGTGTCCACAGGAGCCTGTGTGAGTGGGTGGGTGATCAGCATTGTGCAAGGGTaGATTCTCCTTGTCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: APWVNSVSTGACVSGWVISIVQG*ILLVWR Trigger: TCTCCAGACAAGGAGAATCAACCCTTGCACAATGCT...GATCACCCACCCACTCACACAGGCTCCTGTGGACACACTGTTGACCCAAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS TCA 90 bp | ATCCTGGTCCTTGGGGACTCTCCCAACTCAGACTGTGCTTTCCATTaGCAGTTAGCTCCTCCACCACCTGAGCTTCATCCTGATGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILVLGDSPNSDCAFH*QLAPPPPELHPDAA Trigger: AGCTGCATCAGGATGAAGCTCAGGTGGTGGAGGAGCTAACTGTCAATGGAAAGCACAGTCTGAGTTGGGAGAGTCCCCAAGGACCAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS GCA 90 bp | GTGCAAGGGTTGATTCTCCTTGTCTGGAGAATCCCTGCCCCAGTTTaGAGTGGATCTGGGCTGGTGAATCACAATTGCATCAGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VQGLILLVWRIPAPV*SGSGLVNHNCISRQ Trigger: CTGCCTGCTGATGCAATTGTGATTCACCAGCCCAGATCCACTGCAAACTGGGGCAGGGATTCTCCAGACAAGGAGAATCAACCCTTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR CAA 90 bp | GACCTCCTCCGGGTGTCCAGCTTCTTGTCTTTAACCTGTACCAACATCCTGGGCAGACTGTGCTTTCCATaGACAGTTAGCTCCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: DLLRVSSFLSLTCTNILGRLCFP*TVSSST Trigger: GGTGGAGGAGCTAACTGTCAATGGAAAGCACAGTCT...GCCCAGGATGTTGGTACAGGTTAAAGACAAGAAGCTGGACACCCGGAGGAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS-3UTR CAA 90 bp | GACCTCCTCCGGGTGTCCAGCTTCTTGTCTTTAACCTGTACCAACATCCTGGGCTGCCCTTGCTTGTTCTaGTTCTGCCCCTTCTTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: DLLRVSSFLSLTCTNILGCPCLF*FCPFFD Trigger: ATCGAAGAAGGGGCAGAACAAGAACAAGCAAGGGCA...GCCCAGGATGTTGGTACAGGTTAAAGACAAGAAGCTGGACACCCGGAGGAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS CCA 90 bp | AGGGTTGATTCTCCTTGTCTGGAGAATCCCTGCCCCAGTTTGCAGTaGATCTGGGCTGGTGAATCACAATTGCATCAGCAGGCAGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: RVDSPCLENPCPSLQ*IWAGESQLHQQADQ Trigger: TTGATCTGCCTGCTGATGCAATTGTGATTCACCAGCCCAGATCCACTGCAAACTGGGGCAGGGATTCTCCAGACAAGGAGAATCAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS CCA 90 bp | GATTCTCCTTGTCTGGAGAATCCCTGCCCCAGTTTGCAGTGGATCTaGGCTGGTGAATCACAATTGCATCAGCAGGCAGATCAAGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: DSPCLENPCPSLQWI*AGESQLHQQADQVQ Trigger: TTGAACTTGATCTGCCTGCTGATGCAATTGTGATTCACCAGCCCAGATCCACTGCAAACTGGGGCAGGGATTCTCCAGACAAGGAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR CAA 90 bp | CAGTTGAAAAGCAACTTGTTGCCTGAGCGAAAACTCCAAACCTCAAGAGTTCCAAATCCCTGCCCCAGTTaGCAGTGGATCTGGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QLKSNLLPERKLQTSRVPNPCPS*QWIWAG Trigger: ACCAGCCCAGATCCACTGCAAACTGGGGCAGGGATT...TGGAACTCTTGAGGTTTGGAGTTTTCGCTCAGGCAACAAGTTGCTTTTCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS TCA 90 bp | TCAGTATTCCTGAGGTTCTGCCCAGCTTTCTGGTGGTTCTGTTTCTaGGGCATGAGTTTGGTATTCCCGTGTTTCTGCCCAGCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVFLRFCPAFWWFCF*GMSLVFPCFCPAFL Trigger: CAAGAAAGCTGGGCAGAAACACGGGAATACCAAACTCATGCCTCAGAAACAGAACCACCAGAAAGCTGGGCAGAACCTCAGGAATACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS TCA 90 bp | TTGTCTGGAGAATCCCTGCCCCAGTTTGCAGTGGATCTGGGCTGGTaGATCACAATTGCATCAGCAGGCAGATCAAGTTCAACTTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LSGESLPQFAVDLGW*ITIASAGRSSSTSV Trigger: TACTGAAGTTGAACTTGATCTGCCTGCTGATGCAATTGTGATTCACCAGCCCAGATCCACTGCAAACTGGGGCAGGGATTCTCCAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCCACATTCAAACAATCAGAGAGTCAGTCAGCAAAAACAGGCAAGGGCCCAAGCCTCTGCCCTTGCTaGTTCTTGTTCTGCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSTFKQSESQSAKTGKGPSLCPC*FLFCPF Trigger: GAAGGGGCAGAACAAGAACAAGCAAGGGCAGAGGCT...TGGGCCCTTGCCTGTTTTTGCTGACTGACTCTCTGATTGTTTGAATGTGGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS CCA 90 bp | ACCAGCCTCCAAATATGTCATGAATGGGTGAGCTGTCCTCAGAGGTaGGTTTTGATTGTCTGTGCACTTGAAGGCAGGATTCATGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: TSLQICHEWVSCPQR*VLIVCALEGRIHAL Trigger: CAATGCATGAATCCTGCCTTCAAGTGCACAGACAATCAAAACCCACCTCTGAGGACAGCTCACCCATTCATGACATATTTGGAGGCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS TCA 90 bp | ATGGGTGAGCTGTCCTCAGAGGTGGGTTTTGATTGTCTGTGCACTTaGAGGCAGGATTCATGCATTGTTTCCAAGGTGAACATGAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: MGELSSEVGFDCLCT*RQDSCIVSKVNMRN Trigger: GTTTCTCATGTTCACCTTGGAAACAATGCATGAATCCTGCCTTCAAGTGCACAGACAATCAAAACCCACCTCTGAGGACAGCTCACCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS CCA 90 bp | CTTCAGCTGGTATTCAGGGTCAAGAACCTCATTTATTCTTCCCTCTaGCATGTCAATACTGACCTGTTTGAGGTTGGCCTGCTGCACATA | + |
|
Preference number: 5 (lower is better) Translates to: LQLVFRVKNLIYSSL*HVNTDLFEVGLLHI Trigger: TATGTGCAGCAGGCCAACCTCAAACAGGTCAGTATTGACATGCCAGAGGGAAGAATAAATGAGGTTCTTGACCCTGAATACCAGCTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS TCA 90 bp | TTGGTATTCCCGTGTTTCTGCCCAGCTTTCTTGTGGTTCACTTCCTaGAGCACTTTCCCCTTTCCTAAGGAGGTTTCTTTAATTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVFPCFCPAFLWFTS*STFPFPKEVSLIAL Trigger: GAGAGCAATTAAAGAAACCTCCTTAGGAAAGGGGAAAGTGCTTCAGGAAGTGAACCACAAGAAAGCTGGGCAGAAACACGGGAATACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS-3UTR CAA 90 bp | CAGTTGAAAAGCAACTTGTTGCCTGAGCGAAAACTCCAAACCTCAAGAGTTCCAACTTTTCTGTCTAACTaGTTACCCGTGAAGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLKSNLLPERKLQTSRVPTFLSN*LPVKAE Trigger: CTCAGCCTTCACGGGTAACAAGTTAGACAGAAAAGT...TGGAACTCTTGAGGTTTGGAGTTTTCGCTCAGGCAACAAGTTGCTTTTCAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS CAA 90 bp | CACAGGGCCCTGAGAGGTGAGGAGCCTGTCAGCATTGTGCAAGGGTaGATTCTCCTTGTCTGGAGAATCCCTGCCCCAGTTTGCAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HRALRGEEPVSIVQG*ILLVWRIPAPVCSG Trigger: TCCACTGCAAACTGGGGCAGGGATTCTCCAGACAAGGAGAATCAACCCTTGCACAATGCTGACAGGCTCCTCACCTCTCAGGGCCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS TCA 72 bp | TGTGGAAGGCAGAGGTCAAAATATGGGAGGGCTTCATaGCATCCCCCGAGTGAGAGTGCAGGAGACTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CGRQRSKYGRAS*HPPSESAGDSG Trigger: CCCAGAGTCTCCTGCACTCTCACTCGGGGGATGTCATGAAGCCCTCCCATATTTTGACCTCTGCCTTCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS TCA 72 bp | TACAGAGCTGCCAAGTGTTCACAGGGCCCTGAGAGGTaGGGAGCCTGTCAGCATTGTGCAAGGGTTGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: YRAAKCSQGPER*GACQHCARVDS Trigger: AGAATCAACCCTTGCACAATGCTGACAGGCTCCTCACCTCTCAGGGCCCTGTGAACACTTGGCAGCTCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS CCA 72 bp | CCTGTCAGCATTGTGCAAGGGTTGATTCTCCTTGTCTaGAGAATCCCTGCCCCAGTTTGCAGTGGATCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PVSIVQGLILLV*RIPAPVCSGSG Trigger: CCCAGATCCACTGCAAACTGGGGCAGGGATTCTCCAGACAAGGAGAATCAACCCTTGCACAATGCTGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS CAA 72 bp | CTGAGAGGTGAGGAGCCTGTCAGCATTGTGCAAGGGTaGATTCTCCTTGTCTGGAGAATCCCTGCCCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LRGEEPVSIVQG*ILLVWRIPAPV Trigger: AACTGGGGCAGGGATTCTCCAGACAAGGAGAATCAACCCTTGCACAATGCTGACAGGCTCCTCACCTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS TCA 72 bp | CTTGGGGACTCTCCCAACTCAGACTGTGCTTTCCATTaGCAGTTAGCTCCTCCACCACCTGAGCTTCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: LGDSPNSDCAFH*QLAPPPPELHP Trigger: AGGATGAAGCTCAGGTGGTGGAGGAGCTAACTGTCAATGGAAAGCACAGTCTGAGTTGGGAGAGTCCCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS CCA 72 bp | TGTCTGGAGAATCCCTGCCCCAGTTTGCAGTGGATCTaGGCTGGTGAATCACAATTGCATCAGCAGGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: CLENPCPSLQWI*AGESQLHQQAD Trigger: ATCTGCCTGCTGATGCAATTGTGATTCACCAGCCCAGATCCACTGCAAACTGGGGCAGGGATTCTCCAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS CCA 72 bp | TCTCCTTGTCTGGAGAATCCCTGCCCCAGTTTGCAGTaGATCTGGGCTGGTGAATCACAATTGCATCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPCLENPCPSLQ*IWAGESQLHQQ Trigger: CTGCTGATGCAATTGTGATTCACCAGCCCAGATCCACTGCAAACTGGGGCAGGGATTCTCCAGACAAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS CAA 90 bp | TGTGCAAGGGTTGATTCTCCTTGTCTGGAGAATCCCTGCCCCAGTTaGCAGTGGATCTGGGCTGGTGAATCACAATTGCATCAGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CARVDSPCLENPCPS*QWIWAGESQLHQQA Trigger: TGCCTGCTGATGCAATTGTGATTCACCAGCCCAGATCCACTGCAAACTGGGGCAGGGATTCTCCAGACAAGGAGAATCAACCCTTGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS TCA 72 bp | GAATCCCTGCCCCAGTTTGCAGTGGATCTGGGCTGGTaGATCACAATTGCATCAGCAGGCAGATCAAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ESLPQFAVDLGW*ITIASAGRSSS Trigger: TGAACTTGATCTGCCTGCTGATGCAATTGTGATTCACCAGCCCAGATCCACTGCAAACTGGGGCAGGGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS GCA 72 bp | ACAAGCAGAAGCCTCTGCCCTTGCTTGTTCTTGTTCTaGCCCTTCTTCGATCTTCGTCTCCCTTCCTGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: TSRSLCPCLFLF*PFFDLRLPSCL Trigger: TAGACAGGAAGGGAGACGAAGATCGAAGAAGGGGCAGAACAAGAACAAGCAAGGGCAGAGGCTTCTGCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS GCA 72 bp | TTGATTCTCCTTGTCTGGAGAATCCCTGCCCCAGTTTaGAGTGGATCTGGGCTGGTGAATCACAATTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: LILLVWRIPAPV*SGSGLVNHNCI Trigger: GATGCAATTGTGATTCACCAGCCCAGATCCACTGCAAACTGGGGCAGGGATTCTCCAGACAAGGAGAATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS CAA 72 bp | GTTGATTCTCCTTGTCTGGAGAATCCCTGCCCCAGTTaGCAGTGGATCTGGGCTGGTGAATCACAATTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VDSPCLENPCPS*QWIWAGESQLH Trigger: ATGCAATTGTGATTCACCAGCCCAGATCCACTGCAAACTGGGGCAGGGATTCTCCAGACAAGGAGAATCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS CCA 72 bp | ATAAGGCAAAGGTCCTCCAGTAGGCTCAGACAGGTATaGCTTCAGGTCAAGGAACTCCGGGTAACTTACTTT | + |
|
Preference number: 6 (lower is better) Translates to: IRQRSSSRLRQV*LQVKELRVTYF Trigger: AAAGTAAGTTACCCGGAGTTCCTTGACCTGAAGCCATACCTGTCTGAGCCTACTGGAGGACCTTTGCCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS CAA 72 bp | TGTCATGAATGGGTGAGCTGTCCTCAGAGGTGGGTTTaGATTGTCTGTGCACTTGAAGGCAGGATTCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: CHEWVSCPQRWV*IVCALEGRIHA Trigger: TGCATGAATCCTGCCTTCAAGTGCACAGACAATCAAAACCCACCTCTGAGGACAGCTCACCCATTCATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS TCA 72 bp | CTGTCCTCAGAGGTGGGTTTTGATTGTCTGTGCACTTaGAGGCAGGATTCATGCATTGTTTCCAAGGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LSSEVGFDCLCT*RQDSCIVSKVN Trigger: GTTCACCTTGGAAACAATGCATGAATCCTGCCTTCAAGTGCACAGACAATCAAAACCCACCTCTGAGGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS TCA 72 bp | CCGTGTTTCTGCCCAGCTTTCTTGTGGTTCACTTCCTaGAGCACTTTCCCCTTTCCTAAGGAGGTTTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: PCFCPAFLWFTS*STFPFPKEVSL Trigger: TAAAGAAACCTCCTTAGGAAAGGGGAAAGTGCTTCAGGAAGTGAACCACAAGAAAGCTGGGCAGAAACACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS TCA 72 bp | CATCAGCAGGCAGATCAAGTTCAACTTCAGTATTCCTaGGGTTCTGCCCAGCTTTCTGGTGGTTCTGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HQQADQVQLQYS*GSAQLSGGSVS Trigger: AGAAACAGAACCACCAGAAAGCTGGGCAGAACCTCAGGAATACTGAAGTTGAACTTGATCTGCCTGCTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS CAA 72 bp | CCCAGTTTGCAGTGGATCTGGGCTGGTGAATCACAATaGCATCAGCAGGCAGATCAAGTTCAACTTCAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: PSLQWIWAGESQ*HQQADQVQLQY Trigger: ATACTGAAGTTGAACTTGATCTGCCTGCTGATGCAATTGTGATTCACCAGCCCAGATCCACTGCAAACTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS CAA 90 bp | CTCCAAATATGTCATGAATGGGTGAGCTGTCCTCAGAGGTGGGTTTaGATTGTCTGTGCACTTGAAGGCAGGATTCATGCATTGTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LQICHEWVSCPQRWV*IVCALEGRIHALFP Trigger: TGGAAACAATGCATGAATCCTGCCTTCAAGTGCACAGACAATCAAAACCCACCTCTGAGGACAGCTCACCCATTCATGACATATTTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
||
| CDS GCA 72 bp | CCAGTTTGCAGTGGATCTGGGCTGGTGAATCACAATTaGATCAGCAGGCAGATCAAGTTCAACTTCAGTATT | + |
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Preference number: 6 (lower is better) Translates to: PVCSGSGLVNHN*ISRQIKFNFSI Trigger: AATACTGAAGTTGAACTTGATCTGCCTGCTGATGCAATTGTGATTCACCAGCCCAGATCCACTGCAAACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS CCA 72 bp | CAAATATGTCATGAATGGGTGAGCTGTCCTCAGAGGTaGGTTTTGATTGTCTGTGCACTTGAAGGCAGGATT | + |
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Preference number: 6 (lower is better) Translates to: QICHEWVSCPQR*VLIVCALEGRI Trigger: AATCCTGCCTTCAAGTGCACAGACAATCAAAACCCACCTCTGAGGACAGCTCACCCATTCATGACATATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS CCA 72 bp | CTTTGGAGCAATATGAACATGCAGGGTCTTAGAAGCTaGCATCTTCTGTCTACACTTACCACAGTAGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: LWSNMNMQGLRS*HLLSTLTTVVG Trigger: GCCTACTACTGTGGTAAGTGTAGACAGAAGATGCCAGCTTCTAAGACCCTGCATGTTCATATTGCTCCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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| CDS CCA 72 bp | GTATTCAGGGTCAAGAACCTCATTTATTCTTCCCTCTaGCATGTCAATACTGACCTGTTTGAGGTTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: VFRVKNLIYSSL*HVNTDLFEVGL Trigger: CAGGCCAACCTCAAACAGGTCAGTATTGACATGCCAGAGGGAAGAATAAATGAGGTTCTTGACCCTGAATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067695.8 |
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