Pregenerated sensors for USP16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025616Ensembl transcript IDs: ENSMUST00000026710.12, ENSMUST00000119504.8, ENSMUST00000131356.8, ENSMUST00000144759.8
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCGGTTCGCGAGGGTACAGAAAGCAGTTTCTGGGTCCTCGTTCATaGCCTCATATACCTTGGGTGCAGAATGACTGTCATTCGGAATCT | + |
|
Preference number: 1 (lower is better) Translates to: LGSRGYRKQFLGPRS*PHIPWVQNDCHSES Trigger: AGATTCCGAATGACAGTCATTCTGCACCCAAGGTATATGAGGTCATGAACGAGGACCCAGAAACTGCTTTCTGTACCCTCGCGAACCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR GCA 90 bp | CTCTCGGTGTTAGCACTTTTCACTCCTAGGTCCTCTGGGCTTTCCTaGACATCAGGTGTCCTTTCTATCATGCTCTCTTGGCCATCCAAA | + |
|
Preference number: 1 (lower is better) Translates to: LSVLALFTPRSSGLS*TSGVLSIMLSWPSK Trigger: TTTGGATGGCCAAGAGAGCATGATAGAAAGGACACCTGATGTGCAGGAAAGCCCAGAGGACCTAGGAGTGAAAAGTGCTAACACCGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR GCA 90 bp | TGGCCTGCTTTTTGGCCTGCTTCTTTGCCTTTTTCTGTAGGTGCTTaGTTGTCCCTGACGGAAGATCGCTCCTTGATTTCATGTAGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: WPAFWPASLPFSVGA*LSLTEDRSLISCSC Trigger: ACAGCTACATGAAATCAAGGAGCGATCTTCCGTCAGGGACAAGCAAGCACCTACAGAAAAAGGCAAAGAAGCAGGCCAAAAAGCAGGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CCA 90 bp | AGTACTAAACGCTTCTCGGTTCGCGAGGGTACAGAAAGCAGTTTCTaGGTCCTCGTTCATGACCTCATATACCTTGGGTGCAGAATGACT | + |
|
Preference number: 1 (lower is better) Translates to: STKRFSVREGTESSF*VLVHDLIYLGCRMT Trigger: AGTCATTCTGCACCCAAGGTATATGAGGTCATGAACGAGGACCCAGAAACTGCTTTCTGTACCCTCGCGAACCGAGAAGCGTTTAGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR GCA 90 bp | GGAAACTTTATGTGTTTGTTAACTTTGCGCAGGTTAAAACCAGCCTaGTGGAATCGCTTTAAATGCAGAGTGAGGACAGGAGGCGCGAGG | + |
|
Preference number: 1 (lower is better) Translates to: GNFMCLLTLRRLKPA*WNRFKCRVRTGGAR Trigger: CCTCGCGCCTCCTGTCCTCACTCTGCATTTAAAGCGATTCCAGCAGGCTGGTTTTAACCTGCGCAAAGTTAACAAACACATAAAGTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CCA 90 bp | TCTGGGCTTTCCTGCACATCAGGTGTCCTTTCTATCATGCTCTCTTaGCCATCCAAATCCTTCTGGTTAACAGACAGCTCTATCTGTGTG | + |
|
Preference number: 1 (lower is better) Translates to: SGLSCTSGVLSIMLS*PSKSFWLTDSSICV Trigger: CACACAGATAGAGCTGTCTGTTAACCAGAAGGATTTGGATGGCCAAGAGAGCATGATAGAAAGGACACCTGATGTGCAGGAAAGCCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CCA 90 bp | AACTTTATGTGTTTGTTAACTTTGCGCAGGTTAAAACCAGCCTGCTaGAATCGCTTTAAATGCAGAGTGAGGACAGGAGGCGCGAGGGAG | + |
|
Preference number: 1 (lower is better) Translates to: NFMCLLTLRRLKPAC*NRFKCRVRTGGARE Trigger: CTCCCTCGCGCCTCCTGTCCTCACTCTGCATTTAAAGCGATTCCAGCAGGCTGGTTTTAACCTGCGCAAAGTTAACAAACACATAAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CCA 90 bp | ATTCCATTTCACAATCTTGTGGAATGTCACCGTGAAGAACAAGATTaGAGAGGTGACAGCTTGCAGTTCTCTCCTTCGCATAGGCAGTGT | + |
|
Preference number: 1 (lower is better) Translates to: IPFHNLVECHREEQD*RGDSLQFSPSHRQC Trigger: ACACTGCCTATGCGAAGGAGAGAACTGCAAGCTGTCACCTCTCCAATCTTGTTCTTCACGGTGACATTCCACAAGATTGTGAAATGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR TCA 90 bp | AGTACTTTAGTTATAGGCACAGCTTGCACATGTGTATCGCTGATGTaGAACCACTGCCCTTTGGTTGATTCCATTTCACAATCTTGTGGA | + |
|
Preference number: 1 (lower is better) Translates to: STLVIGTACTCVSLM*NHCPLVDSISQSCG Trigger: TCCACAAGATTGTGAAATGGAATCAACCAAAGGGCAGTGGTTTCACATCAGCGATACACATGTGCAAGCTGTGCCTATAACTAAAGTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR GCA 90 bp | GAAAGCAGTTTCTGGGTCCTCGTTCATGACCTCATATACCTTGGGTaGAGAATGACTGTCATTCGGAATCTCTATATTTATTTCATCAGG | + |
|
Preference number: 1 (lower is better) Translates to: ESSFWVLVHDLIYLG*RMTVIRNLYIYFIR Trigger: CCTGATGAAATAAATATAGAGATTCCGAATGACAGTCATTCTGCACCCAAGGTATATGAGGTCATGAACGAGGACCCAGAAACTGCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR TCA 90 bp | GTTTCTGGGTCCTCGTTCATGACCTCATATACCTTGGGTGCAGAATaGCTGTCATTCGGAATCTCTATATTTATTTCATCAGGATCAACA | + |
|
Preference number: 1 (lower is better) Translates to: VSGSSFMTSYTLGAE*LSFGISIFISSGST Trigger: TGTTGATCCTGATGAAATAAATATAGAGATTCCGAATGACAGTCATTCTGCACCCAAGGTATATGAGGTCATGAACGAGGACCCAGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTGGAGAGGTGACAGCTTGCAGTTCTCTCCTTCGCATAGGCAGTGTAATGCCCGCTTTAAATGCAGAGTaGGGACAGGAGGCGCGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: IGEVTACSSLLRIGSVMPALNAE*GQEARG Trigger: CCCTCGCGCCTCCTGTCCTCACTCTGCATTTAAAGC...GGGCATTACACTGCCTATGCGAAGGAGAGAACTGCAAGCTGTCACCTCTCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCACTCCTAGGTCCTCTGGGCTTTCCTGCACATCAGGTGTCCTTTCTATCATGTGTGGCCTCCTCTTaGGAACCATGGGTGGAGTCG | + |
|
Preference number: 2 (lower is better) Translates to: FSLLGPLGFPAHQVSFLSCVASS*EPWVES Trigger: CGACTCCACCCATGGTTCTCAAGAGGAGGCCACACA...TGATAGAAAGGACACCTGATGTGCAGGAAAGCCCAGAGGACCTAGGAGTGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTAAATGCAGAGTGAGGACAGGAGGCGCGAGGGAGACCAGCATCTGCTTCTTGCGTTGGTTCTTGGCCTaGTTTTTGGCCTGCTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: FKCRVRTGGARETSICFLRWFLA*FLACFF Trigger: AAAGAAGCAGGCCAAAAAGCAGGCCAAGAACCAACG...CAAGAAGCAGATGCTGGTCTCCCTCGCGCCTCCTGTCCTCACTCTGCATTTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CAA 90 bp | CTTGTGGAATGTCACCGTGAAGAACAAGATTGGAGAGGTGACAGCTaGCAGTTCTCTCCTTCGCATAGGCAGTGTAATGCCCTGACCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LVECHREEQDWRGDS*QFSPSHRQCNALTS Trigger: TGAGGTCAGGGCATTACACTGCCTATGCGAAGGAGAGAACTGCAAGCTGTCACCTCTCCAATCTTGTTCTTCACGGTGACATTCCACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CAA 90 bp | CCTGCTTTTTGGCCTGCTTCTTTGCCTTTTTCTGTAGGTGCTTGCTaGTCCCTGACGGAAGATCGCTCCTTGATTTCATGTAGCTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: PAFWPASLPFSVGAC*SLTEDRSLISCSCH Trigger: ATGACAGCTACATGAAATCAAGGAGCGATCTTCCGTCAGGGACAAGCAAGCACCTACAGAAAAAGGCAAAGAAGCAGGCCAAAAAGCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGGAGAGGTGACAGCTTGCAGTTCTCTCCTTCGCATAGGCAGTGTAATGCCCTCTGCTTCTTGGCATTaGTGTAAACATGTCTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: IGEVTACSSLLRIGSVMPSASWH*CKHVSC Trigger: ACAGGAGACATGTTTACACCAATGCCAAGAAGCAGA...GGGCATTACACTGCCTATGCGAAGGAGAGAACTGCAAGCTGTCACCTCTCCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTGGAGAGGTGACAGCTTGCAGTTCTCTCCTTCGCATAGGCAGTGTAATGCCCCTTTTCTTACCACTCTaGTCATCTAAAACTGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: IGEVTACSSLLRIGSVMPLFLPL*SSKTGR Trigger: TCTTCCAGTTTTAGATGATCAGAGTGGTAAGAAAAG...GGGCATTACACTGCCTATGCGAAGGAGAGAACTGCAAGCTGTCACCTCTCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CAA 90 bp | CCTTTTTCTGTAGGTGCTTGCTTGTCCCTGACGGAAGATCGCTCCTaGATTTCATGTAGCTGTCATCTTTCTCTTCCTCACTGTCTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: PFSVGACLSLTEDRS*ISCSCHLSLPHCLY Trigger: ATAAAGACAGTGAGGAAGAGAAAGATGACAGCTACATGAAATCAAGGAGCGATCTTCCGTCAGGGACAAGCAAGCACCTACAGAAAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTATATTTGCCTTTGGTCCATTACACTGCCGTCTTGAACACACTTCACAAAGCGCCTTTTTCTGTAGGTaGTTGCTTGTCCCTGACGGA | + |
|
Preference number: 2 (lower is better) Translates to: FIFAFGPLHCRLEHTSQSAFFCR*LLVPDG Trigger: TCCGTCAGGGACAAGCAAGCACCTACAGAAAAAGGC...GCTTTGTGAAGTGTGTTCAAGACGGCAGTGTAATGGACCAAAGGCAAATATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR-3UTR GCA 90 bp | AATCTTGTGGAATGTCACCGTGAAGAACAAGATTGGAGAGGTGACAGCTTGCAGGTCACCTTTTATATTTaGCTTTGGTCCATTACACTG | + |
|
Preference number: 2 (lower is better) Translates to: NLVECHREEQDWRGDSLQVTFYI*LWSITL Trigger: CAGTGTAATGGACCAAAGGCAAATATAAAAGGTGAC...CTGCAAGCTGTCACCTCTCCAATCTTGTTCTTCACGGTGACATTCCACAAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR-3UTR CCA 90 bp | CACTCGTGTACTTTCTTCAGCAACATTCTTACATTTAAGGGTACAAAAAGGAGCTGTCTAGTTCTCCACTaGTCCTTTCTTCCAGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: HSCTFFSNILTFKGTKRSCLVLH*SFLPGR Trigger: CCTTCCTGGAAGAAAGGACCAGTGGAGAACTAGACA...GCTCCTTTTTGTACCCTTAAATGTAAGAATGTTGCTGAAGAAAGTACACGAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR-3UTR CCA 90 bp | GACCTCATATACCTTGGGTGCAGAATGACTGTCATTCGGAATCTCTATATTTATTCTATCATGCTCTCTTaGCCATCCAAATCCTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: DLIYLGCRMTVIRNLYIYSIMLS*PSKSFW Trigger: CCAGAAGGATTTGGATGGCCAAGAGAGCATGATAGA...ATAAATATAGAGATTCCGAATGACAGTCATTCTGCACCCAAGGTATATGAGGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CAA 90 bp | TCCTGTCACCTTTTATATTTGCCTTTGGTCCATTACACTGCCGTCTaGAACACACTTCACAAAGCAGTTTATTGGCATCTTGAAGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SCHLLYLPLVHYTAV*NTLHKAVYWHLEVS Trigger: AGAAACTTCAAGATGCCAATAAACTGCTTTGTGAAGTGTGTTCAAGACGGCAGTGTAATGGACCAAAGGCAAATATAAAAGGTGACAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CAA 90 bp | GGAGCCAAATCTAAGATTTCTGGAAACTTTATGTGTTTGTTAACTTaGCGCAGGTTAAAACCAGCCTGCTGGAATCGCTTTAAATGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GAKSKISGNFMCLLT*RRLKPACWNRFKCR Trigger: TCTGCATTTAAAGCGATTCCAGCAGGCTGGTTTTAACCTGCGCAAAGTTAACAAACACATAAAGTTTCCAGAAATCTTAGATTTGGCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTACTTTCTTCAGCAACATTCTTACATTTAAGGGTACAAAAAGGAGCCAAATCTTTTGTTGCCTTCGTTaGTTCTTGGCCTGCTTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: CTFFSNILTFKGTKRSQIFCCLR*FLACFL Trigger: CAAAAAGCAGGCCAAGAACCAACGAAGGCAACAAAA...GATTTGGCTCCTTTTTGTACCCTTAAATGTAAGAATGTTGCTGAAGAAAGTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR GCA 72 bp | CGCAGGTTAAAACCAGCCTGCTGGAATCGCTTTAAATaGAGAGTGAGGACAGGAGGCGCGAGGGAGACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RRLKPACWNRFK*RVRTGGARETS Trigger: GCTGGTCTCCCTCGCGCCTCCTGTCCTCACTCTGCATTTAAAGCGATTCCAGCAGGCTGGTTTTAACCTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CCA 72 bp | CGCTTCTCGGTTCGCGAGGGTACAGAAAGCAGTTTCTaGGTCCTCGTTCATGACCTCATATACCTTGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RFSVREGTESSF*VLVHDLIYLGC Trigger: GCACCCAAGGTATATGAGGTCATGAACGAGGACCCAGAAACTGCTTTCTGTACCCTCGCGAACCGAGAAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR GCA 72 bp | GTCACCGTGAAGAACAAGATTGGAGAGGTGACAGCTTaGAGTTCTCTCCTTCGCATAGGCAGTGTAATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: VTVKNKIGEVTA*SSLLRIGSVMP Trigger: GGGCATTACACTGCCTATGCGAAGGAGAGAACTGCAAGCTGTCACCTCTCCAATCTTGTTCTTCACGGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR TCA 72 bp | CGAGGGTACAGAAAGCAGTTTCTGGGTCCTCGTTCATaGCCTCATATACCTTGGGTGCAGAATGACTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: RGYRKQFLGPRS*PHIPWVQNDCH Trigger: ATGACAGTCATTCTGCACCCAAGGTATATGAGGTCATGAACGAGGACCCAGAAACTGCTTTCTGTACCCTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR GCA 72 bp | TTAGCACTTTTCACTCCTAGGTCCTCTGGGCTTTCCTaGACATCAGGTGTCCTTTCTATCATGCTCTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LALFTPRSSGLS*TSGVLSIMLSW Trigger: CCAAGAGAGCATGATAGAAAGGACACCTGATGTGCAGGAAAGCCCAGAGGACCTAGGAGTGAAAAGTGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CCA 72 bp | GAGGCGCGAGGGAGACCAGCATCTGCTTCTTGGCATTaGTGTAAACATGTCTCCTGTCACCTTTTATATTTG | + |
|
Preference number: 3 (lower is better) Translates to: EARGRPASASWH*CKHVSCHLLYL Trigger: CAAATATAAAAGGTGACAGGAGACATGTTTACACCAATGCCAAGAAGCAGATGCTGGTCTCCCTCGCGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTACAGAAAGCAGTTTCTGGGTCCTCGTTCATGACCTCATATACCTTGGGTGCTTTTTGTTGCCTTCGTaGGTTCTTGGCCTGCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GTESSFWVLVHDLIYLGCFLLPS*VLGLLF Trigger: AAAAAGCAGGCCAAGAACCAACGAAGGCAACAAAAA...GCACCCAAGGTATATGAGGTCATGAACGAGGACCCAGAAACTGCTTTCTGTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR TCA 72 bp | TGCAGTTCTCTCCTTCGCATAGGCAGTGTAATGCCCTaGCCTCATAGTACCACTGTGTTCAACAACTCCATA | + |
|
Preference number: 3 (lower is better) Translates to: CSSLLRIGSVMP*PHSTTVFNNSI Trigger: TATGGAGTTGTTGAACACAGTGGTACTATGAGGTCAGGGCATTACACTGCCTATGCGAAGGAGAGAACTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CCA 72 bp | CTTTCTATCATGCTCTCTTGGCCATCCAAATCCTTCTaGTTAACAGACAGCTCTATCTGTGTGGCCTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSIMLSWPSKSF*LTDSSICVASS Trigger: AGAGGAGGCCACACAGATAGAGCTGTCTGTTAACCAGAAGGATTTGGATGGCCAAGAGAGCATGATAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CCA 72 bp | TCCTGCACATCAGGTGTCCTTTCTATCATGCTCTCTTaGCCATCCAAATCCTTCTGGTTAACAGACAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SCTSGVLSIMLS*PSKSFWLTDSS Trigger: AGAGCTGTCTGTTAACCAGAAGGATTTGGATGGCCAAGAGAGCATGATAGAAAGGACACCTGATGTGCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CCA 72 bp | CACAATCTTGTGGAATGTCACCGTGAAGAACAAGATTaGAGAGGTGACAGCTTGCAGTTCTCTCCTTCGCAT | + |
|
Preference number: 3 (lower is better) Translates to: HNLVECHREEQD*RGDSLQFSPSH Trigger: ATGCGAAGGAGAGAACTGCAAGCTGTCACCTCTCCAATCTTGTTCTTCACGGTGACATTCCACAAGATTGTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR TCA 72 bp | ATGTGTATCGCTGATGTGAAACCACTGCCCTTTGGTTaGTTCCATTTCACAATCTTGTGGAATGTCACCGTG | + |
|
Preference number: 3 (lower is better) Translates to: MCIADVKPLPFG*FHFTILWNVTV Trigger: CACGGTGACATTCCACAAGATTGTGAAATGGAATCAACCAAAGGGCAGTGGTTTCACATCAGCGATACACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR TCA 72 bp | GTTATAGGCACAGCTTGCACATGTGTATCGCTGATGTaGAACCACTGCCCTTTGGTTGATTCCATTTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: VIGTACTCVSLM*NHCPLVDSISQ Trigger: TTGTGAAATGGAATCAACCAAAGGGCAGTGGTTTCACATCAGCGATACACATGTGCAAGCTGTGCCTATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR GCA 72 bp | TTCTGGGTCCTCGTTCATGACCTCATATACCTTGGGTaGAGAATGACTGTCATTCGGAATCTCTATATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: FWVLVHDLIYLG*RMTVIRNLYIY Trigger: ATAAATATAGAGATTCCGAATGACAGTCATTCTGCACCCAAGGTATATGAGGTCATGAACGAGGACCCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR-3UTR CAA 90 bp | GACCTCATATACCTTGGGTGCAGAATGACTGTCATTCGGAATCTCTATATTTATACGGAAGATCGCTCCTaGATTTCATGTAGCTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: DLIYLGCRMTVIRNLYIYTEDRS*ISCSCH Trigger: ATGACAGCTACATGAAATCAAGGAGCGATCTTCCGT...ATAAATATAGAGATTCCGAATGACAGTCATTCTGCACCCAAGGTATATGAGGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR GCA 72 bp | CTGTCACCTTTTATATTTGCCTTTGGTCCATTACACTaGCGTCTTGAACACACTTCACAAAGCAGTTTATTG | + |
|
Preference number: 3 (lower is better) Translates to: LSPFIFAFGPLH*RLEHTSQSSLL Trigger: CAATAAACTGCTTTGTGAAGTGTGTTCAAGACGGCAGTGTAATGGACCAAAGGCAAATATAAAAGGTGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTACTTTCTTCAGCAACATTCTTACATTTAAGGGTACAAAAAGGAGCCAAATCCATTACACTGCCGTCTaGAACACACTTCACAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CTFFSNILTFKGTKRSQIHYTAV*NTLHKA Trigger: TGCTTTGTGAAGTGTGTTCAAGACGGCAGTGTAATG...GATTTGGCTCCTTTTTGTACCCTTAAATGTAAGAATGTTGCTGAAGAAAGTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR TCA 72 bp | TCCTCGTTCATGACCTCATATACCTTGGGTGCAGAATaGCTGTCATTCGGAATCTCTATATTTATTTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: SSFMTSYTLGAE*LSFGISIFISS Trigger: TGATGAAATAAATATAGAGATTCCGAATGACAGTCATTCTGCACCCAAGGTATATGAGGTCATGAACGAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR TCA 72 bp | GCAGTTTATTGGCATCTTGAAGTTTCTCATTCCGGGTaGACTGATATAAGCAATGTTGAATGGAACACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: AVYWHLEVSHSG*TDISNVEWNTH Trigger: ATGAGTGTTCCATTCAACATTGCTTATATCAGTTCACCCGGAATGAGAAACTTCAAGATGCCAATAAACTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTCGTGTACTTTCTTCAGCAACATTCTTACATTTAAGGGTACAAAAAGGAGCTGTCACCTTTTATATTaGCCTTTGGTCCATTACACT | + |
|
Preference number: 3 (lower is better) Translates to: HSCTFFSNILTFKGTKRSCHLLY*PLVHYT Trigger: AGTGTAATGGACCAAAGGCAAATATAAAAGGTGACA...GCTCCTTTTTGTACCCTTAAATGTAAGAATGTTGCTGAAGAAAGTACACGAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CAA 72 bp | CTGGTTAACAGACAGCTCTATCTGTGTGGCCTCCTCTaGAGAACCATGGGTGGAGTCGGTATCCACTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVNRQLYLCGLL*RTMGGVGIHFH Trigger: GTGGAAGTGGATACCGACTCCACCCATGGTTCTCAAGAGGAGGCCACACAGATAGAGCTGTCTGTTAACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCACTCCTAGGTCCTCTGGGCTTTCCTGCACATCAGGTGTCCTTTCTATCAGCTCGCCACCAAAGATaGGGTCCACAAAACTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSLLGPLGFPAHQVSFLSARHQR*GPQNSG Trigger: TCCCGAGTTTTGTGGACCGCATCTTTGGTGGCGAGC...TGATAGAAAGGACACCTGATGTGCAGGAAAGCCCAGAGGACCTAGGAGTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR TCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTGTGTGGCCTCCTCTTaGGAACCATGGGTGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHCVASS*EPWVES Trigger: CGACTCCACCCATGGTTCTCAAGAGGAGGCCACACA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR GCA 90 bp | ATTGGAGAGGTGACAGCTTGCAGTTCTCTCCTTCGCATAGGCAGTGTAATGCCCAACCGAAGGGTCTTCTaGTTCCTCCTCAGGTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: IGEVTACSSLLRIGSVMPNRRVF*FLLRFI Trigger: GATAAACCTGAGGAGGAAGCAGAAGACCCTTCGGTT...GGGCATTACACTGCCTATGCGAAGGAGAGAACTGCAAGCTGTCACCTCTCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CAA 72 bp | TGTCACCGTGAAGAACAAGATTGGAGAGGTGACAGCTaGCAGTTCTCTCCTTCGCATAGGCAGTGTAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: CHREEQDWRGDS*QFSPSHRQCNA Trigger: GGCATTACACTGCCTATGCGAAGGAGAGAACTGCAAGCTGTCACCTCTCCAATCTTGTTCTTCACGGTGACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR TCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCAAGGCATGCTGCTCCTaGGAATCTCTGCCACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSKACCS*ESLPQP Trigger: GGGCTGTGGCAGAGATTCTCAGGAGCAGCATGCCTT...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTCCAGTTGTCCAGACTaGGCACCAGGTAGTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHSSCPD*APGSEA Trigger: AGCCTCACTACCTGGTGCTCAGTCTGGACAACTGGA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | GGTCCATTACACTGCCGTCTTGAACACACTTCACAAAGCAGTTTATTGGCATCTTCCAGTTGTCCAGACTaGGCACCAGGTAGTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPLHCRLEHTSQSSLLASSSCPD*APGSEA Trigger: AGCCTCACTACCTGGTGCTCAGTCTGGACAACTGGA...AGATGCCAATAAACTGCTTTGTGAAGTGTGTTCAAGACGGCAGTGTAATGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR TCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCGCTTTAAATGCAGAGTaGGGACAGGAGGCGCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSALNAE*GQEARG Trigger: CCCTCGCGCCTCCTGTCCTCACTCTGCATTTAAAGC...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR GCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCGCTCCTGAGAATCTCTaGCACAGCCCTGATGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSAPENL*HSPDGH Trigger: GTGGCCATCAGGGCTGTGGCAGAGATTCTCAGGAGC...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR GCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACGCTCGCCACCAAAGATaGGGTCCACAAAACTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHARHQR*GPQNSG Trigger: TCCCGAGTTTTGTGGACCGCATCTTTGGTGGCGAGC...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| 3UTR CAA 72 bp | GTAGGTGCTTGCTTGTCCCTGACGGAAGATCGCTCCTaGATTTCATGTAGCTGTCATCTTTCTCTTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGACLSLTEDRS*ISCSCHLSLPH Trigger: GTGAGGAAGAGAAAGATGACAGCTACATGAAATCAAGGAGCGATCTTCCGTCAGGGACAAGCAAGCACCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CAA 72 bp | TGGCCTGCTTCTTTGCCTTTTTCTGTAGGTGCTTGCTaGTCCCTGACGGAAGATCGCTCCTTGATTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: WPASLPFSVGAC*SLTEDRSLISC Trigger: ACATGAAATCAAGGAGCGATCTTCCGTCAGGGACAAGCAAGCACCTACAGAAAAAGGCAAAGAAGCAGGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR TCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACGGCAGTGTAATGCCCTaGCCTCATAGTACCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHGSVMP*PHSTTV Trigger: CACAGTGGTACTATGAGGTCAGGGCATTACACTGCC...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCTCTCTGCCACAGCCCTaGTGGCCACATTTAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSSLPQP*WPHLRQ Trigger: CTGTCTTAAATGTGGCCATCAGGGCTGTGGCAGAGA...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACGCACATGTGTATCGCTaGTGTGAAACCACTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHAHVYR*CETTAL Trigger: AAGGGCAGTGGTTTCACATCAGCGATACACATGTGC...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR GCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACGCCTTTTTCTGTAGGTaGTTGCTTGTCCCTGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHAFFCR*LLVPDG Trigger: TCCGTCAGGGACAAGCAAGCACCTACAGAAAAAGGC...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR GCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTCCTCTGGGCTTTCCTaGACATCAGGTGTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHSSGLS*TSGVLS Trigger: AGAAAGGACACCTGATGTGCAGGAAAGCCCAGAGGA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACACCTTGGGTGCAGAATaGCTGTCATTCGGAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHTLGAE*LSFGIS Trigger: AGAGATTCCGAATGACAGTCATTCTGCACCCAAGGT...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACGCTTTAAATGCAGAGTaGGGACAGGAGGCGCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQYKSHRCISRESTFCYHALNAE*GQEARG Trigger: CCCTCGCGCCTCCTGTCCTCACTCTGCATTTAAAGC...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR TCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCACAAGATTGGAGAGGTaGCAGCTTGCAGTTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSTRLER*QLAVLS Trigger: GGAGAGAACTGCAAGCTGTCACCTCTCCAATCTTGT...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTGTGGAATGTCACCGTaGAGAACAAGATTGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHCGMSP*RTRLER Trigger: CCTCTCCAATCTTGTTCTTCACGGTGACATTCCACA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTGTGTATCGCTGATGTaGAACCACTGCCCTTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHCVSLM*NHCPLV Trigger: AACCAAAGGGCAGTGGTTTCACATCAGCGATACACA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR GCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACCGTTGGTTCTTGGCCTaGTTTTTGGCCTGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHRWFLA*FLACFF Trigger: AAAGAAGCAGGCCAAAAAGCAGGCCAAGAACCAACG...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR GCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTGGAATCGCTTTAAATaGAGAGTGAGGACAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHWNRFK*RVRTGG Trigger: GCCTCCTGTCCTCACTCTGCATTTAAAGCGATTCCA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACCCTTTCACAGTTATCTaGGAAGCAGAGTCCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHPFTVI*EAESMG Trigger: TCCCATGGACTCTGCTTCCCAGATAACTGTGAAAGG...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTGTCTAGTTCTCCACTaGTCCTTTCTTCCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHCLVLH*SFLPGR Trigger: CCTTCCTGGAAGAAAGGACCAGTGGAGAACTAGACA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACACAGAAAGCAGTTTCTaGGTCCTCGTTCATGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHTESSF*VLVHDL Trigger: GAGGTCATGAACGAGGACCCAGAAACTGCTTTCTGT...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CCA 90 bp | TTTAAATGCAGAGTGAGGACAGGAGGCGCGAGGGAGACCAGCATCTGCTTCTTGTTTCTTTTCATAATTTaGTGTTCTTCCGCTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: FKCRVRTGGARETSICFLFLFII*CSSALI Trigger: GATGAGAGCGGAAGAACACCAAATTATGAAAAGAAA...CAAGAAGCAGATGCTGGTCTCCCTCGCGCCTCCTGTCCTCACTCTGCATTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR TCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTAAGGCATGCTGCTCCTaGGAATCTCTGCCACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLKACCS*ESLPQP Trigger: GGGCTGTGGCAGAGATTCTCAGGAGCAGCATGCCTT...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR TCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTTTCTCTGCTGGTTTTaGAGTTCTTACGCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHFLCWF*SSYASL Trigger: CAAGCTGGCGTAAGAACTTCAAAACCAGCAGAGAAA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCTCTCTTGCATCTCACTaGGAAACTGGCTCATGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSSLASH*ETGSWL Trigger: TAGCCATGAGCCAGTTTCTCAGTGAGATGCAAGAGA...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCCGGAAGATCGCTCCTTaGTTTCATGTAGCTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSRKIAP*FHVAVI Trigger: GATGACAGCTACATGAAATCAAGGAGCGATCTTCCG...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTTGTGTGGCCTCCTCTTaGGAACCATGGGTGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLCVASS*EPWVES Trigger: CGACTCCACCCATGGTTCTCAAGAGGAGGCCACACA...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR TCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACCCACTGCCCTTTGGTTaGTTCCATTTCACAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHPLPFG*FHFTIL Trigger: CAAGATTGTGAAATGGAATCAACCAAAGGGCAGTGG...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR GCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCAACCGAAGGGTCTTCTaGTTCCTCCTCAGGTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSNRRVF*FLLRFI Trigger: GATAAACCTGAGGAGGAAGCAGAAGACCCTTCGGTT...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR GCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTGCTCCTGAGAATCTCTaGCACAGCCCTGATGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLAPENL*HSPDGH Trigger: GTGGCCATCAGGGCTGTGGCAGAGATTCTCAGGAGC...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR GCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACCTCATATACCTTGGGTaGAGAATGACTGTCATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHLIYLG*RMTVIR Trigger: CCGAATGACAGTCATTCTGCACCCAAGGTATATGAG...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR GCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACGTTATAGGCACAGCTTaGACATGTGTATCGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHVIGTA*TCVSLM Trigger: CATCAGCGATACACATGTGCAAGCTGTGCCTATAAC...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTCTTGGCCTGCTTTTTaGCCTGCTTCTTTGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHSWPAF*PASLPF Trigger: AAAAGGCAAAGAAGCAGGCCAAAAAGCAGGCCAAGA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACTCTCTGCCACAGCCCTaGTGGCCACATTTAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQYKSHRCISRESTFCYHSLPQP*WPHLRQ Trigger: CTGTCTTAAATGTGGCCATCAGGGCTGTGGCAGAGA...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR TCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTTCCAGTTGTCCAGACTaGGCACCAGGTAGTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLSSCPD*APGSEA Trigger: AGCCTCACTACCTGGTGCTCAGTCTGGACAACTGGA...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR TCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTGGCGCAGAGCTCATTaGAGTGAAGAAATCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHWRRAH*SEEIFL Trigger: AAGAAAGATTTCTTCACTTCAATGAGCTCTGCGCCA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACAGTTTATTGGCATCTTaGAGTTTCTCATTCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHSLLAS*SFSFRV Trigger: CACCCGGAATGAGAAACTTCAAGATGCCAATAAACT...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCATTACACTGCCGTCTTaGACACACTTCACAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSITLPS*THFTKQ Trigger: CTGCTTTGTGAAGTGTGTTCAAGACGGCAGTGTAAT...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR GCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACCGCTTTTTGTTCTCTTaGATCTCACTGAGAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHRFLFS*ISLRNW Trigger: CCAGTTTCTCAGTGAGATGCAAGAGAACAAAAAGCG...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACAGTATTCTCGCTCGCCACCAAAGATaGGGTCCACAAAACTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSHRCISRESTFCYHSILARHQR*GPQNSG Trigger: TCCCGAGTTTTGTGGACCGCATCTTTGGTGGCGAGC...GAGAATACTGTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTGGCTGTCTTGTTGCTaGTACCCTTTAAAACGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHWLSCC*YPLKRV Trigger: AACACGTTTTAAAGGGTACCAGCAACAAGACAGCCA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTTTTGTTGCCTTCGTTaGTTCTTGGCCTGCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHFCCLR*FLACFL Trigger: CAAAAAGCAGGCCAAGAACCAACGAAGGCAACAAAA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCTCTATCATGCTCTCTTaGCCATCCAAATCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSSIMLS*PSKSFW Trigger: CCAGAAGGATTTGGATGGCCAAGAGAGCATGATAGA...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCCCAGCATCTGCTTCTTaGCATTGGTGTAAACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSPASAS*HWCKHV Trigger: GACATGTTTACACCAATGCCAAGAAGCAGATGCTGG...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTTCTCTGCCACAGCCCTaGTGGCCACATTTAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLSLPQP*WPHLRQ Trigger: CTGTCTTAAATGTGGCCATCAGGGCTGTGGCAGAGA...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACGCACATGTGTATCGCTaGTGTGAAACCACTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQYKSHRCISRESTFCYHAHVYR*CETTAL Trigger: AAGGGCAGTGGTTTCACATCAGCGATACACATGTGC...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCACTCCTAGGTCCTCTGGGCTTTCCTGCACATCAGGTGTCCTTTCTATCAGTTTGTGACAAGTTCTaGATAACTGCATTGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSLLGPLGFPAHQVSFLSVCDKF*ITALKK Trigger: TTTCTTCAATGCAGTTATGCAGAACTTGTCACAAAC...TGATAGAAAGGACACCTGATGTGCAGGAAAGCCCAGAGGACCTAGGAGTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR GCA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACGCCTTTTTCTGTAGGTaGTTGCTTGTCCCTGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQYKSHRCISRESTFCYHAFFCR*LLVPDG Trigger: TCCGTCAGGGACAAGCAAGCACCTACAGAAAAAGGC...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCTCAGTCTTACAGTCTTaGCAGATATTCCACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSSVLQS*QIFHST Trigger: TGTGGAGTGGAATATCTGCCAAGACTGTAAGACTGA...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCCCATCCAAATCCTTCTaGTTAACAGACAGCTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSPSKSF*LTDSSI Trigger: GATAGAGCTGTCTGTTAACCAGAAGGATTTGGATGG...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCTCTGCTTCTTGGCATTaGTGTAAACATGTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSSASWH*CKHVSC Trigger: ACAGGAGACATGTTTACACCAATGCCAAGAAGCAGA...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTTAAAACCAGCCTGCTaGAATCGCTTTAAATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHLKPAC*NRFKCR Trigger: TCTGCATTTAAAGCGATTCCAGCAGGCTGGTTTTAA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACGAAACCACTGCCCTTTaGTTGATTCCATTTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHETTAL*LIPFHN Trigger: ATTGTGAAATGGAATCAACCAAAGGGCAGTGGTTTC...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| 3UTR CAA 72 bp | TGTAAACATGTCTCCTGTCACCTTTTATATTTGCCTTaGGTCCATTACACTGCCGTCTTGAACACACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CKHVSCHLLYLP*VHYTAVLNTLH Trigger: GTGAAGTGTGTTCAAGACGGCAGTGTAATGGACCAAAGGCAAATATAAAAGGTGACAGGAGACATGTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACTGTGTATCGCTGATGTaGAACCACTGCCCTTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQYKSHRCISRESTFCYHCVSLM*NHCPLV Trigger: AACCAAAGGGCAGTGGTTTCACATCAGCGATACACA...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACAGTATTCTCTCCTCTGGGCTTTCCTaGACATCAGGTGTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSHRCISRESTFCYHSILSSGLS*TSGVLS Trigger: AGAAAGGACACCTGATGTGCAGGAAAGCCCAGAGGA...GAGAATACTGTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR GCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACGTCACCTTTTATATTTaGCTTTGGTCCATTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHVTFYI*LWSITL Trigger: CAGTGTAATGGACCAAAGGCAAATATAAAAGGTGAC...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR GCA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACTGGAATCGCTTTAAATaGAGAGTGAGGACAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQYKSHRCISRESTFCYHWNRFK*RVRTGG Trigger: GCCTCCTGTCCTCACTCTGCATTTAAAGCGATTCCA...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CCA 90 bp | TTTATATTTGCCTTTGGTCCATTACACTGCCGTCTTGAACACACTTCACAAAGCTCAGTCTTACAGTCTTaGCAGATATTCCACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FIFAFGPLHCRLEHTSQSSVLQS*QIFHST Trigger: TGTGGAGTGGAATATCTGCCAAGACTGTAAGACTGA...GCTTTGTGAAGTGTGTTCAAGACGGCAGTGTAATGGACCAAAGGCAAATATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR CCA 90 bp | TTTATATTTGCCTTTGGTCCATTACACTGCCGTCTTGAACACACTTCACAAAGCTGGCTGTCTTGTTGCTaGTACCCTTTAAAACGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FIFAFGPLHCRLEHTSQSWLSCC*YPLKRV Trigger: AACACGTTTTAAAGGGTACCAGCAACAAGACAGCCA...GCTTTGTGAAGTGTGTTCAAGACGGCAGTGTAATGGACCAAAGGCAAATATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACTGTCTAGTTCTCCACTaGTCCTTTCTTCCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQYKSHRCISRESTFCYHCLVLH*SFLPGR Trigger: CCTTCCTGGAAGAAAGGACCAGTGGAGAACTAGACA...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CCA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTTTTATATTTGCCTTTaGTCCATTACACTGCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GNISLLMCQALPPSQSKHFYICL*SITLPS Trigger: AGACGGCAGTGTAATGGACCAAAGGCAAATATAAAA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCCATTTCACAATCTTGTaGAATGTCACCGTGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSHFTIL*NVTVKN Trigger: GTTCTTCACGGTGACATTCCACAAGATTGTGAAATG...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTTCTCTTGCATCTCACTaGGAAACTGGCTCATGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLSLASH*ETGSWL Trigger: TAGCCATGAGCCAGTTTCTCAGTGAGATGCAAGAGA...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR TCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCCTTTTCTTACCACTCTaGTCATCTAAAACTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSLFLPL*SSKTGR Trigger: TCTTCCAGTTTTAGATGATCAGAGTGGTAAGAAAAG...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR TCA 90 bp | AAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACAGTATTCTCCGGAAGATCGCTCCTTaGTTTCATGTAGCTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: KSHRCISRESTFCYHSILRKIAP*FHVAVI Trigger: GATGACAGCTACATGAAATCAAGGAGCGATCTTCCG...GAGAATACTGTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR TCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTACCTTGGGTGCAGAATaGCTGTCATTCGGAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLTLGAE*LSFGIS Trigger: AGAGATTCCGAATGACAGTCATTCTGCACCCAAGGT...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR GCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTAACCGAAGGGTCTTCTaGTTCCTCCTCAGGTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLNRRVF*FLLRFI Trigger: GATAAACCTGAGGAGGAAGCAGAAGACCCTTCGGTT...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR GCA 90 bp | CACTCGTGTACTTTCTTCAGCAACATTCTTACATTTAAGGGTACAAAAAGGAGCCGCTTTTTGTTCTCTTaGATCTCACTGAGAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSCTFFSNILTFKGTKRSRFLFS*ISLRNW Trigger: CCAGTTTCTCAGTGAGATGCAAGAGAACAAAAAGCG...GCTCCTTTTTGTACCCTTAAATGTAAGAATGTTGCTGAAGAAAGTACACGAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR GCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTCGTTGGTTCTTGGCCTaGTTTTTGGCCTGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLRWFLA*FLACFF Trigger: AAAGAAGCAGGCCAAAAAGCAGGCCAAGAACCAACG...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTCCTTTCACAGTTATCTaGGAAGCAGAGTCCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLPFTVI*EAESMG Trigger: TCCCATGGACTCTGCTTCCCAGATAACTGTGAAAGG...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACAGTATTCTCACAGAAAGCAGTTTCTaGGTCCTCGTTCATGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSHRCISRESTFCYHSILTESSF*VLVHDL Trigger: GAGGTCATGAACGAGGACCCAGAAACTGCTTTCTGT...GAGAATACTGTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACCCAGCATCTGCTTCTTaGCATTGGTGTAAACATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQYKSHRCISRESTFCYHPASAS*HWCKHV Trigger: GACATGTTTACACCAATGCCAAGAAGCAGATGCTGG...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACAGTTTATTGGCATCTTaGAGTTTCTCATTCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQYKSHRCISRESTFCYHSLLAS*SFSFRV Trigger: CACCCGGAATGAGAAACTTCAAGATGCCAATAAACT...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR TCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTATTACACTGCCGTCTTaGACACACTTCACAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLITLPS*THFTKQ Trigger: CTGCTTTGTGAAGTGTGTTCAAGACGGCAGTGTAAT...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR TCA 90 bp | GACCTCATATACCTTGGGTGCAGAATGACTGTCATTCGGAATCTCTATATTTATATTTTTCTCTGGTTTTaGAGTTCTTACGCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DLIYLGCRMTVIRNLYIYIFLWF*SSYASL Trigger: CAAGCTGGCGTAAGAACTTCAAAACCAGAGAAAAAT...ATAAATATAGAGATTCCGAATGACAGTCATTCTGCACCCAAGGTATATGAGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR GCA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCGTTTGTGACAAGTTCTaGATAACTGCATTGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KHYHPVRVSTELSYSNPSVCDKF*ITALKK Trigger: TTTCTTCAATGCAGTTATGCAGAACTTGTCACAAAC...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR GCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTCTCATATACCTTGGGTaGAGAATGACTGTCATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLLIYLG*RMTVIR Trigger: CCGAATGACAGTCATTCTGCACCCAAGGTATATGAG...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACAGTATTCTCTCTTGGCCTGCTTTTTaGCCTGCTTCTTTGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSHRCISRESTFCYHSILSWPAF*PASLPF Trigger: AAAAGGCAAAGAAGCAGGCCAAAAAGCAGGCCAAGA...GAGAATACTGTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTTCTATCATGCTCTCTTaGCCATCCAAATCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLSIMLS*PSKSFW Trigger: CCAGAAGGATTTGGATGGCCAAGAGAGCATGATAGA...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACTCTGCTTCTTGGCATTaGTGTAAACATGTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQYKSHRCISRESTFCYHSASWH*CKHVSC Trigger: ACAGGAGACATGTTTACACCAATGCCAAGAAGCAGA...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| 3UTR CAA 72 bp | CTTTTATATTTGCCTTTGGTCCATTACACTGCCGTCTaGAACACACTTCACAAAGCAGTTTATTGGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLYLPLVHYTAV*NTLHKAVYWHL Trigger: AAGATGCCAATAAACTGCTTTGTGAAGTGTGTTCAAGACGGCAGTGTAATGGACCAAAGGCAAATATAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| 3UTR CAA 72 bp | TCTAAGATTTCTGGAAACTTTATGTGTTTGTTAACTTaGCGCAGGTTAAAACCAGCCTGCTGGAATCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKISGNFMCLLT*RRLKPACWNRF Trigger: AAAGCGATTCCAGCAGGCTGGTTTTAACCTGCGCAAAGTTAACAAACACATAAAGTTTCCAGAAATCTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR TCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTTGGCGCAGAGCTCATTaGAGTGAAGAAATCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLWRRAH*SEEIFL Trigger: AAGAAAGATTTCTTCACTTCAATGAGCTCTGCGCCA...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACATTTTTCTCTGGTTTTaGAGTTCTTACGCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQYKSHRCISRESTFCYHIFLWF*SSYASL Trigger: CAAGCTGGCGTAAGAACTTCAAAACCAGAGAAAAAT...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACAGTATTCTCCCACTGCCCTTTGGTTaGTTCCATTTCACAATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KSHRCISRESTFCYHSILPLPFG*FHFTIL Trigger: TAAGATTGTGAAATGGAATCAACCAAAGGGCAGTGG...GAGAATACTGTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACAGTATTCTCCGCTTTTTGTTCTCTTaGATCTCACTGAGAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSHRCISRESTFCYHSILRFLFS*ISLRNW Trigger: CCAGTTTCTCAGTGAGATGCAAGAGAACAAAAAGCG...GAGAATACTGTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACAGTATTCTCTCAGTCTTACAGTCTTaGCAGATATTCCACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KSHRCISRESTFCYHSILSVLQS*QIFHST Trigger: TGTGGAGTGGAATATCTGCCAAGACTGTAAGACTGA...GAGAATACTGTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTTGGCTGTCTTGTTGCTaGTACCCTTTAAAACGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLWLSCC*YPLKRV Trigger: AACACGTTTTAAAGGGTACCAGCAACAAGACAGCCA...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTTTTTGTTGCCTTCGTTaGTTCTTGGCCTGCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLFCCLR*FLACFL Trigger: CAAAAAGCAGGCCAAGAACCAACGAAGGCAACAAAA...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTCCATCCAAATCCTTCTaGTTAACAGACAGCTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLPSKSF*LTDSSI Trigger: GATAGAGCTGTCTGTTAACCAGAAGGATTTGGATGG...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACGAAACCACTGCCCTTTaGTTGATTCCATTTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQYKSHRCISRESTFCYHETTAL*LIPFHN Trigger: ATTGTGAAATGGAATCAACCAAAGGGCAGTGGTTTC...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR GCA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACGTCACCTTTTATATTTaGCTTTGGTCCATTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: SQYKSHRCISRESTFCYHVTFYI*LWSITL Trigger: CAGTGTAATGGACCAAAGGCAAATATAAAAGGTGAC...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTTTAAAACCAGCCTGCTaGAATCGCTTTAAATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLLKPAC*NRFKCR Trigger: TCTGCATTTAAAGCGATTCCAGCAGGCTGGTTTTAA...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACAGTATTCTCCTTTTCTTACCACTCTaGTCATCTAAAACTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSHRCISRESTFCYHSILLFLPL*SSKTGR Trigger: TCTTCCAGTTTTAGATGATCAGAGTGGTAAGAAAAG...GAGAATACTGTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR GCA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACGTTTGTGACAAGTTCTaGATAACTGCATTGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQYKSHRCISRESTFCYHVCDKF*ITALKK Trigger: TTTCTTCAATGCAGTTATGCAGAACTTGTCACAAAC...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CCA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTTTTTATATTTGCCTTTaGTCCATTACACTGCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VITVFSHKIGDTLVSSVLFYICL*SITLPS Trigger: AGACGGCAGTGTAATGGACCAAAGGCAAATATAAAA...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS TCA 90 bp | CTTCCTCGTCACACTTGTAGCACCAGACGCTCCAGTTGTCCAGACTaGGCACCAGGTAGTGAGGCTCGGATCTCGGTGTCGTGTAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPRHTCSTRRSSCPD*APGSEARISVSCSA Trigger: AGCACTACACGACACCGAGATCCGAGCCTCACTACCTGGTGCTCAGTCTGGACAACTGGAGCGTCTGGTGCTACAAGTGTGACGAGGAAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026710.12 ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS TCA 90 bp | TTCCAACCCTTTTCTAAGGTGTCTGCACACTGGTTCTGCAGACTCTaGGGCCACCGTGTCTGGAGCACTTCTCCCCTTGGTCCGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FQPFSKVSAHWFCRL*GHRVWSTSPLGPFL Trigger: AAGAAACGGACCAAGGGGAGAAGTGCTCCAGACACGGTGGCCTCAGAGTCTGCAGAACCAGTGTGCAGACACCTTAGAAAAGGGTTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026710.12 ENSMUST00000119504.8 ENSMUST00000131356.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CAA 90 bp | GGTACAGAAAGCAGTTTCTGGGTCCTCGTTCATGACCTCATATACCTTGGGTGCCAGCTCCTGGCTGTCTaGTTGCTGGTACCCTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: GTESSFWVLVHDLIYLGCQLLAV*LLVPFK Trigger: TTTAAAGGGTACCAGCAACAAGACAGCCAGGAGCTG...GCACCCAAGGTATATGAGGTCATGAACGAGGACCCAGAAACTGCTTTCTGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR CAA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACCTGTGTGGCCTCCTCTaGAGAACCATGGGTGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GNISLLMCQALPPSQSKHLCGLL*RTMGGV Trigger: GACTCCACCCATGGTTCTCAAGAGGAGGCCACACAG...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CAA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTGGAGAGGTGACAGCTaGCAGTTCTCTCCTTCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GNISLLMCQALPPSQSKHWRGDS*QFSPSH Trigger: ATGCGAAGGAGAGAACTGCAAGCTGTCACCTCTCCA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS TCA 90 bp | GCCAGCTTGTTTTCTAACATAATCAACCACTTGGCCCAATCGGTTTaGGCTACAGTACTTGACTTCCTCGTCACACTTGTAGCACCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ASLFSNIINHLAQSV*ATVLDFLVTLVAPD Trigger: GTCTGGTGCTACAAGTGTGACGAGGAAGTCAAGTACTGTAGCTCAAACCGATTGGGCCAAGTGGTTGATTATGTTAGAAAACAAGCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026710.12 ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CAA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACCAGCTCCTGGCTGTCTaGTTGCTGGTACCCTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: GNISLLMCQALPPSQSKHQLLAV*LLVPFK Trigger: TTTAAAGGGTACCAGCAACAAGACAGCCAGGAGCTG...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS GCA 90 bp | GCCCTGATGGCCACATTTAAGACAGAGCCAAACCGAAGGGTCTTCTaGTTCCTCCTCAGGTTTATCTTTCACTTTATTGTCAGTCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: ALMATFKTEPNRRVF*FLLRFIFHFIVSLT Trigger: TGTAAGACTGACAATAAAGTGAAAGATAAACCTGAGGAGGAAGCAGAAGACCCTTCGGTTTGGCTCTGTCTTAAATGTGGCCATCAGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026710.12 ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CAA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCCTCCTGGCTGTCTTGTaGCTGGTACCCTTTAAAACG | + |
|
Preference number: 5 (lower is better) Translates to: KHYHPVRVSTELSYSNPSLLAVL*LVPFKT Trigger: CGTTTTAAAGGGTACCAGCAACAAGACAGCCAGGAG...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CAA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACCTGTGTGGCCTCCTCTaGAGAACCATGGGTGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SQYKSHRCISRESTFCYHLCGLL*RTMGGV Trigger: GACTCCACCCATGGTTCTCAAGAGGAGGCCACACAG...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CAA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACGTCACAACTCGCTTTTaGTTCTCTTGCATCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GNISLLMCQALPPSQSKHVTTRF*FSCISL Trigger: CAGTGAGATGCAAGAGAACAAAAAGCGAGTTGTGAC...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CAA 90 bp | GGTCCATTACACTGCCGTCTTGAACACACTTCACAAAGCAGTTTATTGGCATCTGTCACAACTCGCTTTTaGTTCTCTTGCATCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GPLHCRLEHTSQSSLLASVTTRF*FSCISL Trigger: CAGTGAGATGCAAGAGAACAAAAAGCGAGTTGTGAC...AGATGCCAATAAACTGCTTTGTGAAGTGTGTTCAAGACGGCAGTGTAATGGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR CAA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTTTTCTCTGCTGGTTTaGAAGTTCTTACGCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GNISLLMCQALPPSQSKHFSLLV*KFLRQL Trigger: AAGCTGGCGTAAGAACTTCAAAACCAGCAGAGAAAA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CAA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCACGGAAGATCGCTCCTaGATTTCATGTAGCTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KHYHPVRVSTELSYSNPSTEDRS*ISCSCH Trigger: ATGACAGCTACATGAAATCAAGGAGCGATCTTCCGT...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CAA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTTTTTGTTGCCTTCGTaGGTTCTTGGCCTGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GNISLLMCQALPPSQSKHFLLPS*VLGLLF Trigger: AAAAAGCAGGCCAAGAACCAACGAAGGCAACAAAAA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CAA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCCATTACACTGCCGTCTaGAACACACTTCACAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KHYHPVRVSTELSYSNPSHYTAV*NTLHKA Trigger: TGCTTTGTGAAGTGTGTTCAAGACGGCAGTGTAATG...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CAA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACCTTTTATATTTGCCTTaGGTCCATTACACTGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GNISLLMCQALPPSQSKHLLYLP*VHYTAV Trigger: GACGGCAGTGTAATGGACCAAAGGCAAATATAAAAG...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CAA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCAGTTATAGGCACAGCTaGCACATGTGTATCGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: KHYHPVRVSTELSYSNPSSYRHS*HMCIAD Trigger: ATCAGCGATACACATGTGCAAGCTGTGCCTATAACT...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CAA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACCTCCTGGCTGTCTTGTaGCTGGTACCCTTTAAAACG | + |
|
Preference number: 5 (lower is better) Translates to: SQYKSHRCISRESTFCYHLLAVL*LVPFKT Trigger: CGTTTTAAAGGGTACCAGCAACAAGACAGCCAGGAG...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CAA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCATGTGTTTGTTAACTTaGCGCAGGTTAAAACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KHYHPVRVSTELSYSNPSMCLLT*RRLKPA Trigger: GGCTGGTTTTAACCTGCGCAAAGTTAACAAACACAT...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS CCA 90 bp | AAGAAACAAGTATTCCCCAAATTACTGAGTCCTTTCACAGTTATCTaGGAAGCAGAGTCCATGGGAATAGTTTCTTTAGCCAGGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KKQVFPKLLSPFTVI*EAESMGIVSLARFS Trigger: GGAAAACCTGGCTAAAGAAACTATTCCCATGGACTCTGCTTCCCAGATAACTGTGAAAGGACTCAGTAATTTGGGGAATACTTGTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026710.12 ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCATTACACTGCCGTCTTGAACACACTTCACAAAGCAGTTTATTGGCATCTAGTTCTTACGCCAGCTaGTTTTCTAACATAATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GPLHCRLEHTSQSSLLASSSYAS*FSNIIN Trigger: GTTGATTATGTTAGAAAACAAGCTGGCGTAAGAACT...AGATGCCAATAAACTGCTTTGTGAAGTGTGTTCAAGACGGCAGTGTAATGGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR CAA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCTTCTGCATAACTGCATaGAAGAAACAAGTATTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KHYHPVRVSTELSYSNPSFCITA*KKQVFP Trigger: GGGGAATACTTGTTTCTTCAATGCAGTTATGCAGAA...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CAA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTCTCCTGGCTGTCTTGTaGCTGGTACCCTTTAAAACG | + |
|
Preference number: 5 (lower is better) Translates to: VITVFSHKIGDTLVSSVLLLAVL*LVPFKT Trigger: CGTTTTAAAGGGTACCAGCAACAAGACAGCCAGGAG...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CAA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTCAGCTCCTGGCTGTCTaGTTGCTGGTACCCTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: VITVFSHKIGDTLVSSVLQLLAV*LLVPFK Trigger: TTTAAAGGGTACCAGCAACAAGACAGCCAGGAGCTG...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CAA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACTGTCACCTTTTATATTaGCCTTTGGTCCATTACACT | + |
|
Preference number: 5 (lower is better) Translates to: GNISLLMCQALPPSQSKHCHLLY*PLVHYT Trigger: AGTGTAATGGACCAAAGGCAAATATAAAAGGTGACA...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CAA 90 bp | GGGAATATCAGTTTATTGATGTGTCAAGCACTACCACCCAGTCAGAGTAAGCACGGAAACTTTATGTGTTaGTTAACTTTGCGCAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GNISLLMCQALPPSQSKHGNFMC*LTLRRL Trigger: TAACCTGCGCAAAGTTAACAAACACATAAAGTTTCC...GTGCTTACTCTGACTGGGTGGTAGTGCTTGACACATCAATAAACTGATATTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CAA 90 bp | AAGCACTACCACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCAGTTCTTACGCCAGCTaGTTTTCTAACATAATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: KHYHPVRVSTELSYSNPSSSYAS*FSNIIN Trigger: GTTGATTATGTTAGAAAACAAGCTGGCGTAAGAACT...GGAAGGATTTGAATAACTAAGTTCTGTGCTTACTCTGACTGGGTGGTAGTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026710.12 |
||
| CDS-3UTR CAA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACACGGAAGATCGCTCCTaGATTTCATGTAGCTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SQYKSHRCISRESTFCYHTEDRS*ISCSCH Trigger: ATGACAGCTACATGAAATCAAGGAGCGATCTTCCGT...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CAA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTGTCACAACTCGCTTTTaGTTCTCTTGCATCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: VITVFSHKIGDTLVSSVLVTTRF*FSCISL Trigger: CAGTGAGATGCAAGAGAACAAAAAGCGAGTTGTGAC...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CAA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTCATTACACTGCCGTCTaGAACACACTTCACAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VITVFSHKIGDTLVSSVLHYTAV*NTLHKA Trigger: TGCTTTGTGAAGTGTGTTCAAGACGGCAGTGTAATG...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CAA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACATGTGTTTGTTAACTTaGCGCAGGTTAAAACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SQYKSHRCISRESTFCYHMCLLT*RRLKPA Trigger: GGCTGGTTTTAACCTGCGCAAAGTTAACAAACACAT...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACAGTATTCTCTTTTTGTTGCCTTCGTaGGTTCTTGGCCTGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KSHRCISRESTFCYHSILFLLPS*VLGLLF Trigger: AAAAAGCAGGCCAAGAACCAACGAAGGCAACAAAAA...GAGAATACTGTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CAA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTCTTTTATATTTGCCTTaGGTCCATTACACTGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VITVFSHKIGDTLVSSVLLLYLP*VHYTAV Trigger: GACGGCAGTGTAATGGACCAAAGGCAAATATAAAAG...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CAA 90 bp | GACCTCATATACCTTGGGTGCAGAATGACTGTCATTCGGAATCTCTATATTTATTATTTTTCTCTGGTTTaGAAGTTCTTACGCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DLIYLGCRMTVIRNLYIYYFSLV*KFLRQL Trigger: AAGCTGGCGTAAGAACTTCAAAACCAGAGAAAAATA...ATAAATATAGAGATTCCGAATGACAGTCATTCTGCACCCAAGGTATATGAGGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144759.8 |
||
| CDS-3UTR CAA 90 bp | AGCCAGTATAAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACTATTTTTCTCTGGTTTaGAAGTTCTTACGCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SQYKSHRCISRESTFCYHYFSLV*KFLRQL Trigger: AAGCTGGCGTAAGAACTTCAAAACCAGAGAAAAATA...GTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTTATACTGGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CAA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTAGTTCTTACGCCAGCTaGTTTTCTAACATAATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VITVFSHKIGDTLVSSVLSSYAS*FSNIIN Trigger: GTTGATTATGTTAGAAAACAAGCTGGCGTAAGAACT...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS-3UTR CAA 90 bp | GTTATCACAGTATTCTCTCATAAAATAGGAGATACGCTTGTGAGTTCAGTACTTTGTCACCTTTTATATTaGCCTTTGGTCCATTACACT | + |
|
Preference number: 5 (lower is better) Translates to: VITVFSHKIGDTLVSSVLCHLLY*PLVHYT Trigger: AGTGTAATGGACCAAAGGCAAATATAAAAGGTGACA...AAGTACTGAACTCACAAGCGTATCTCCTATTTTATGAGAGAATACTGTGATAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGCCATAGGTGTATTTCCAGAGAAAGCACTTTTTGTTATCACAGTATTCTCGGAAACTTTATGTGTTaGTTAACTTTGCGCAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: KSHRCISRESTFCYHSILGNFMC*LTLRRL Trigger: TAACCTGCGCAAAGTTAACAAACACATAAAGTTTCC...GAGAATACTGTGATAACAAAAAGTGCTTTCTCTGGAAATACACCTATGGCTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||
| CDS TCA 72 bp | CACACTTGTAGCACCAGACGCTCCAGTTGTCCAGACTaGGCACCAGGTAGTGAGGCTCGGATCTCGGTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: HTCSTRRSSCPD*APGSEARISVS Trigger: CGACACCGAGATCCGAGCCTCACTACCTGGTGCTCAGTCTGGACAACTGGAGCGTCTGGTGCTACAAGTGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026710.12 ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS TCA 72 bp | TTTTCTAAGGTGTCTGCACACTGGTTCTGCAGACTCTaGGGCCACCGTGTCTGGAGCACTTCTCCCCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: FSKVSAHWFCRL*GHRVWSTSPLG Trigger: ACCAAGGGGAGAAGTGCTCCAGACACGGTGGCCTCAGAGTCTGCAGAACCAGTGTGCAGACACCTTAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026710.12 ENSMUST00000119504.8 ENSMUST00000131356.8 ENSMUST00000144759.8 |
||
| CDS GCA 72 bp | GCCACATTTAAGACAGAGCCAAACCGAAGGGTCTTCTaGTTCCTCCTCAGGTTTATCTTTCACTTTATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ATFKTEPNRRVF*FLLRFIFHFIV Trigger: GACAATAAAGTGAAAGATAAACCTGAGGAGGAAGCAGAAGACCCTTCGGTTTGGCTCTGTCTTAAATGTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026710.12 ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS GCA 72 bp | AGCTCTTTAGGTGTCACAACTCGCTTTTTGTTCTCTTaGATCTCACTGAGAAACTGGCTCATGGCTAAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: SSLGVTTRFLFS*ISLRNWLMAKV Trigger: TACTTTAGCCATGAGCCAGTTTCTCAGTGAGATGCAAGAGAACAAAAAGCGAGTTGTGACACCTAAAGAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026710.12 ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS CAA 90 bp | ACCGAAGGGTCTTCTGCTTCCTCCTCAGGTTTATCTTTCACTTTATaGTCAGTCTTACAGTCTTGGCAGATATTCCACTCCACATTTACT | + |
|
Preference number: 6 (lower is better) Translates to: TEGSSASSSGLSFTL*SVLQSWQIFHSTFT Trigger: AGTAAATGTGGAGTGGAATATCTGCCAAGACTGTAAGACTGACAATAAAGTGAAAGATAAACCTGAGGAGGAAGCAGAAGACCCTTCGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026710.12 ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS TCA 72 bp | TTTTCTAACATAATCAACCACTTGGCCCAATCGGTTTaGGCTACAGTACTTGACTTCCTCGTCACACTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: FSNIINHLAQSV*ATVLDFLVTLV Trigger: TACAAGTGTGACGAGGAAGTCAAGTACTGTAGCTCAAACCGATTGGGCCAAGTGGTTGATTATGTTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026710.12 ENSMUST00000119504.8 ENSMUST00000144759.8 |
||
| CDS TCA 72 bp | ATGTGTATCGCTGATGTGAAACCACTGCCCTTTGGTTaGTTCCATTTCACAATCTTACATTTAAGGGTACAA | + |
|
Preference number: 6 (lower is better) Translates to: MCIADVKPLPFG*FHFTILHLRVQ Trigger: TTGTACCCTTAAATGTAAGATTGTGAAATGGAATCAACCAAAGGGCAGTGGTTTCACATCAGCGATACACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119504.8 |
||