Pregenerated sensors for USP14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047879Ensembl transcript IDs: ENSMUST00000092096.14, ENSMUST00000116669.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGCCAGCAACAGTCAGTCTGGACAATACTTGATTGCACCCAGTTaGTGGGATGTGGACAGCAGCACTGAGTTACACGAAGAGAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: KASNSQSGQYLIAPS*WDVDSSTELHEESN Trigger: GTTGCTCTCTTCGTGTAACTCAGTGCTGCTGTCCACATCCCATCAACTGGGTGCAATCAAGTATTGTCCAGACTGACTGTTGCTGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| 3UTR CCA 90 bp | GACAGTGAAGACATGAAGATGAGAGCCAAGCAGCTCCTTGTTGCCTaGCAAGATCAAGAAGGAGTTCATGCAACAACTGATAACCTGATT | + |
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Preference number: 1 (lower is better) Translates to: DSEDMKMRAKQLLVA*QDQEGVHATTDNLI Trigger: AATCAGGTTATCAGTTGTTGCATGAACTCCTTCTTGATCTTGCCAGGCAACAAGGAGCTGCTTGGCTCTCATCTTCATGTCTTCACTGTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR TCA 90 bp | ACAATACTTGATTGCACCCAGTTGATGGGATGTGGACAGCAGCACTaGGTTACACGAAGAGAGCAACACTTTTCCACCTTCCTAGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: TILDCTQLMGCGQQH*VTRREQHFSTFLEK Trigger: TTTTTCTAGGAAGGTGGAAAAGTGTTGCTCTCTTCGTGTAACTCAGTGCTGCTGTCCACATCCCATCAACTGGGTGCAATCAAGTATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| 3UTR CCA 90 bp | TTGCCAACAAACTTGGTGAGCAGTGGAAGATTTTGGCTCCTTACCTaGAAATTAAAGACTCTGATATTAGGCAGATTGAGTGTGACAGTG | + |
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Preference number: 1 (lower is better) Translates to: LPTNLVSSGRFWLLT*KLKTLILGRLSVTV Trigger: CACTGTCACACTCAATCTGCCTAATATCAGAGTCTTTAATTTCCAGGTAAGGAGCCAAAATCTTCCACTGCTCACCAAGTTTGTTGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR CCA 90 bp | ACAGGGGAGCAGATAGAGTCATTTGCCAACAAACTTGGTGAGCAGTaGAAGATTTTGGCTCCTTACCTGGAAATTAAAGACTCTGATATT | + |
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Preference number: 1 (lower is better) Translates to: TGEQIESFANKLGEQ*KILAPYLEIKDSDI Trigger: AATATCAGAGTCTTTAATTTCCAGGTAAGGAGCCAAAATCTTCCACTGCTCACCAAGTTTGTTGGCAAATGACTCTATCTGCTCCCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR CCA 90 bp | GCAAGAACAACAGATAGGTGTGCAATAAACATCACTGCTAAAGCTTaGGCTGAAAAGGCAAGGGATAAAATGGATTTCAGCCAAGAATTT | + |
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Preference number: 1 (lower is better) Translates to: ARTTDRCAINITAKA*AEKARDKMDFSQEF Trigger: AAATTCTTGGCTGAAATCCATTTTATCCCTTGCCTTTTCAGCCCAAGCTTTAGCAGTGATGTTTATTGCACACCTATCTGTTGTTCTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTGCTCCAAAAACCACATACAGAACAGGCATTGGAGTGGAGAACAGGGTGGGATCACTGCTAAAGCTTaGGCTGAAAAGGCAAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: WCSKNHIQNRHWSGEQGGITAKA*AEKARD Trigger: ATCCCTTGCCTTTTCAGCCCAAGCTTTAGCAGTGAT...CCCACCCTGTTCTCCACTCCAATGCCTGTTCTGTATGTGGTTTTTGGAGCACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR-3UTR CCA 90 bp | AAATCTACCTCACCTGGTTTAGTAGGAAAACACAGGTGCCAAATTCCTTCGTTCCCAGTTGATGGGATGTaGACAGCAGCACTGAGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: KSTSPGLVGKHRCQIPSFPVDGM*TAALSY Trigger: GTAACTCAGTGCTGCTGTCCACATCCCATCAACTGG...GAACGAAGGAATTTGGCACCTGTGTTTTCCTACTAAACCAGGTGAGGTAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR-3UTR CCA 90 bp | TGTAAAGTCATGAAAGGCCAGCAACAGTCAGTCTGGACAATACTTGATTGCACCATCACTGCTAAAGCTTaGGCTGAAAAGGCAAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: CKVMKGQQQSVWTILDCTITAKA*AEKARD Trigger: ATCCCTTGCCTTTTCAGCCCAAGCTTTAGCAGTGAT...GGTGCAATCAAGTATTGTCCAGACTGACTGTTGCTGGCCTTTCATGACTTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCTTGTTGCCTGGCAAGATCAAGAAGGAGTTCATGCAACAACTGATAACTCCTGTCAGTTCACTTaGGATGTGAAAATACCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: QLLVAWQDQEGVHATTDNSCQFT*DVKIPY Trigger: ATAGGGTATTTTCACATCTCAAGTGAACTGACAGGA...GTTATCAGTTGTTGCATGAACTCCTTCTTGATCTTGCCAGGCAACAAGGAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR-3UTR TCA 90 bp | AAATCTACCTCACCTGGTTTAGTAGGAAAACACAGGTGCCAAATTCCTTCGTTCTTTATTGTAAAGTCATaGAAGGCCAGCAACAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: KSTSPGLVGKHRCQIPSFFIVKS*KASNSQ Trigger: CTGACTGTTGCTGGCCTTTCATGACTTTACAATAAA...GAACGAAGGAATTTGGCACCTGTGTTTTCCTACTAAACCAGGTGAGGTAGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR CAA 90 bp | CAGATAGAGTCATTTGCCAACAAACTTGGTGAGCAGTGGAAGATTTaGGCTCCTTACCTGGAAATTAAAGACTCTGATATTAGGCAGATT | + |
|
Preference number: 2 (lower is better) Translates to: QIESFANKLGEQWKI*APYLEIKDSDIRQI Trigger: AATCTGCCTAATATCAGAGTCTTTAATTTCCAGGTAAGGAGCCAAAATCTTCCACTGCTCACCAAGTTTGTTGGCAAATGACTCTATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR CAA 90 bp | ATCAGACCAGATCACGAATATTCAACACTTCATCCTTTCCTTAGATaGCTAAAGTTCCTGAAACATCTAAGGACTTACTCACTGGGTAGT | + |
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Preference number: 2 (lower is better) Translates to: IRPDHEYSTLHPFLR*LKFLKHLRTYSLGS Trigger: ACTACCCAGTGAGTAAGTCCTTAGATGTTTCAGGAACTTTAGCAATCTAAGGAAAGGATGAAGTGTTGAATATTCGTGATCTGGTCTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR-3UTR CCA 90 bp | AATTGCACATCTCTATATTTTCTAGGTCCAGATGTTCGGCGAGATAAACCTATATATTGTACAGTTGGCTaGTGCTCCAAAAACCACATA | + |
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Preference number: 2 (lower is better) Translates to: NCTSLYFLGPDVRRDKPIYCTVG*CSKNHI Trigger: TATGTGGTTTTTGGAGCACCAGCCAACTGTACAATA...TATAGGTTTATCTCGCCGAACATCTGGACCTAGAAAATATAGAGATGTGCAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR TCA 72 bp | CATGAAAGGCCAGCAACAGTCAGTCTGGACAATACTTaGTTGCACCCAGTTGATGGGATGTGGACAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: HERPATVSLDNT*LHPVDGMWTAA Trigger: TGCTGCTGTCCACATCCCATCAACTGGGTGCAATCAAGTATTGTCCAGACTGACTGTTGCTGGCCTTTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| 3UTR GCA 72 bp | ACTGGGCAGACCACTGTTAAGTGTTCTTGCTTGAACTaGACTCTACTAGCTGGGGAAGCAGTGACTAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: TGQTTVKCSCLN*TLLAGEAVTKH Trigger: GTGCTTAGTCACTGCTTCCCCAGCTAGTAGAGTGCAGTTCAAGCAAGAACACTTAACAGTGGTCTGCCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR TCA 72 bp | AACAGTCAGTCTGGACAATACTTGATTGCACCCAGTTaGTGGGATGTGGACAGCAGCACTGAGTTACACGAA | + |
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Preference number: 3 (lower is better) Translates to: NSQSGQYLIAPS*WDVDSSTELHE Trigger: TTCGTGTAACTCAGTGCTGCTGTCCACATCCCATCAACTGGGTGCAATCAAGTATTGTCCAGACTGACTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| 3UTR CCA 72 bp | AGATGTTCGTGTTCTAGTCCCATACAGCATTTCCTGTaGGTGTTTAGTATACTAGTGAAGGGCGACTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: RCSCSSPIQHFL*VFSILVKGDWA Trigger: TGCCCAGTCGCCCTTCACTAGTATACTAAACACCCACAGGAAATGCTGTATGGGACTAGAACACGAACATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR CCA 72 bp | GACATGAAGATGAGAGCCAAGCAGCTCCTTGTTGCCTaGCAAGATCAAGAAGGAGTTCATGCAACAACTGAT | + |
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Preference number: 3 (lower is better) Translates to: DMKMRAKQLLVA*QDQEGVHATTD Trigger: ATCAGTTGTTGCATGAACTCCTTCTTGATCTTGCCAGGCAACAAGGAGCTGCTTGGCTCTCATCTTCATGTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR-3UTR CAA 90 bp | CAGCTCCTTGTTGCCTGGCAAGATCAAGAAGGAGTTCATGCAACAACTGATAACCATCCTTTCCTTAGATaGCTAAAGTTCCTGAAACAT | + |
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Preference number: 3 (lower is better) Translates to: QLLVAWQDQEGVHATTDNHPFLR*LKFLKH Trigger: ATGTTTCAGGAACTTTAGCAATCTAAGGAAAGGATG...GTTATCAGTTGTTGCATGAACTCCTTCTTGATCTTGCCAGGCAACAAGGAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR TCA 72 bp | ACTGTTCTAGCAAATAACACTGAATCCCAGGGGTCATaGCACAAACTATTACAGTACACACAGCACTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: TVLANNTESQGS*HKLLQYTQHCF Trigger: GAAACAGTGCTGTGTGTACTGTAATAGTTTGTGTCATGACCCCTGGGATTCAGTGTTATTTGCTAGAACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR CCA 72 bp | ACAGATAGGTGTGCAATAAACATCACTGCTAAAGCTTaGGCTGAAAAGGCAAGGGATAAAATGGATTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TDRCAINITAKA*AEKARDKMDFS Trigger: GCTGAAATCCATTTTATCCCTTGCCTTTTCAGCCCAAGCTTTAGCAGTGATGTTTATTGCACACCTATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| 3UTR CCA 72 bp | CAGATAGAGTCATTTGCCAACAAACTTGGTGAGCAGTaGAAGATTTTGGCTCCTTACCTGGAAATTAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: QIESFANKLGEQ*KILAPYLEIKD Trigger: GTCTTTAATTTCCAGGTAAGGAGCCAAAATCTTCCACTGCTCACCAAGTTTGTTGGCAAATGACTCTATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR TCA 72 bp | GATAGTTTTAAGTGTTTTCCTGGCACTCTGACATGCTaGCACTACAATAGCAAAGAGTTCAAACTGATAGCC | + |
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Preference number: 3 (lower is better) Translates to: DSFKCFPGTLTC*HYNSKEFKLIA Trigger: GGCTATCAGTTTGAACTCTTTGCTATTGTAGTGTCAGCATGTCAGAGTGCCAGGAAAACACTTAAAACTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR-3UTR CAA 90 bp | GATAGTAACCATGCAAGAACAACAGATAGGTGTGCAATAAACATCACTGCTAAAAGATGCACAAGTGGCTaGGTTCTGTTCTCATTTTCT | + |
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Preference number: 3 (lower is better) Translates to: DSNHARTTDRCAINITAKRCTSG*VLFSFS Trigger: AGAAAATGAGAACAGAACCAAGCCACTTGTGCATCT...TTTAGCAGTGATGTTTATTGCACACCTATCTGTTGTTCTTGCATGGTTACTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| 3UTR-3UTR CAA 90 bp | AATTGCACATCTCTATATTTTCTAGGTCCAGATGTTCGGCGAGATAAACCTATACTGATATTAGGCAGATaGAGTGTGACAGTGAAGACA | + |
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Preference number: 3 (lower is better) Translates to: NCTSLYFLGPDVRRDKPILILGR*SVTVKT Trigger: TGTCTTCACTGTCACACTCAATCTGCCTAATATCAG...TATAGGTTTATCTCGCCGAACATCTGGACCTAGAAAATATAGAGATGTGCAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR CCA 72 bp | AATAAACACTTTTATAACAGCTATTGTACAGTTGGCTaGTGCTCCAAAAACCACATACAGAACAGGCATTGG | + |
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Preference number: 3 (lower is better) Translates to: NKHFYNSYCTVG*CSKNHIQNRHW Trigger: CCAATGCCTGTTCTGTATGTGGTTTTTGGAGCACCAGCCAACTGTACAATAGCTGTTATAAAAGTGTTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR CCA 72 bp | CATTTGCCAACAAACTTGGTGAGCAGTGGAAGATTTTaGCTCCTTACCTGGAAATTAAAGACTCTGATATTA | + |
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Preference number: 3 (lower is better) Translates to: HLPTNLVSSGRF*LLTWKLKTLIL Trigger: TAATATCAGAGTCTTTAATTTCCAGGTAAGGAGCCAAAATCTTCCACTGCTCACCAAGTTTGTTGGCAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| 3UTR-3UTR CAA 90 bp | TCACAGAATTCACTGTCCAAAGGAACTCATCACCTTTACTACTTTGTATTTCTTAGATGCACAAGTGGCTaGGTTCTGTTCTCATTTTCT | + |
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Preference number: 3 (lower is better) Translates to: SQNSLSKGTHHLYYFVFLRCTSG*VLFSFS Trigger: AGAAAATGAGAACAGAACCAAGCCACTTGTGCATCT...AAGAAATACAAAGTAGTAAAGGTGATGAGTTCCTTTGGACAGTGAATTCTGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| CDS-3UTR CCA 90 bp | TGGTGCTCCAAAAACCACATACAGAACAGGCATTGGAGTGGAGAACAGGGTGGGTTTTGTCTGGCTGGCTaGACTCCAGTCAATGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: WCSKNHIQNRHWSGEQGGFCLAG*TPVNAK Trigger: TTTTGCATTGACTGGAGTCCAGCCAGCCAGACAAAA...CCCACCCTGTTCTCCACTCCAATGCCTGTTCTGTATGTGGTTTTTGGAGCACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| CDS-3UTR GCA 90 bp | TGGTGCTCCAAAAACCACATACAGAACAGGCATTGGAGTGGAGAACAGGGTGGGGCTTCTAGTTTCTGTTaGAGGACTCTCATCATTTGT | + |
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Preference number: 4 (lower is better) Translates to: WCSKNHIQNRHWSGEQGGASSFC*RTLIIC Trigger: ACAAATGATGAGAGTCCTGCAACAGAAACTAGAAGC...CCCACCCTGTTCTCCACTCCAATGCCTGTTCTGTATGTGGTTTTTGGAGCACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| CDS-3UTR GCA 90 bp | GATGTGGACAGCAGCACTGAGTTACACGAAGAGAGCAACACTTTTCCACCTTCCCTTGAAGTTCTGGTGTaGAGAGTTCATACACATCCA | + |
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Preference number: 4 (lower is better) Translates to: DVDSSTELHEESNTFPPSLEVLV*RVHTHP Trigger: TGGATGTGTATGAACTCTGCACACCAGAACTTCAAG...GGAAGGTGGAAAAGTGTTGCTCTCTTCGTGTAACTCAGTGCTGCTGTCCACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS-3UTR CCA 90 bp | AAAGTCATGAAAGGCCAGCAACAGTCAGTCTGGACAATACTTGATTGCACCCAGAACTTTTTGTCTGGCTaGCTGGACTCCAGTCAATGC | + |
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Preference number: 4 (lower is better) Translates to: KVMKGQQQSVWTILDCTQNFLSG*LDSSQC Trigger: GCATTGACTGGAGTCCAGCCAGCCAGACAAAAAGTT...CTGGGTGCAATCAAGTATTGTCCAGACTGACTGTTGCTGGCCTTTCATGACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS-3UTR CCA 90 bp | ACAGCAGCACTGAGTTACACGAAGAGAGCAACACTTTTCCACCTTCCTAGAAAAAACTTTTTGTCTGGCTaGCTGGACTCCAGTCAATGC | + |
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Preference number: 4 (lower is better) Translates to: TAALSYTKRATLFHLPRKNFLSG*LDSSQC Trigger: GCATTGACTGGAGTCCAGCCAGCCAGACAAAAAGTT...TTTTCTAGGAAGGTGGAAAAGTGTTGCTCTCTTCGTGTAACTCAGTGCTGCTGT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| 3UTR CAA 72 bp | TGGCTGGTGCTCCAAAAACCACATACAGAACAGGCATaGGAGTGGAGAACAGGGTGGGAAAACAAAGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: WLVLQKPHTEQA*EWRTGWENKVK Trigger: TTTTACTTTGTTTTCCCACCCTGTTCTCCACTCCAATGCCTGTTCTGTATGTGGTTTTTGGAGCACCAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| CDS-3UTR TCA 90 bp | ACCTTCCTAGAAAAATATTGGTTAGATAAGGCAGAGGACGGGCAGCTACTGAAGCAAAAAGCTGGGCTTTaGACACCATTGGAGGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: TFLEKYWLDKAEDGQLLKQKAGL*TPLEVH Trigger: ATGAACCTCCAATGGTGTTCAAAGCCCAGCTTTTTG...CTTCAGTAGCTGCCCGTCCTCTGCCTTATCTAACCAATATTTTTCTAGGAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS-3UTR TCA 90 bp | TGTAAAGTCATGAAAGGCCAGCAACAGTCAGTCTGGACAATACTTGATTGCACCGAGACCATTTTCTCTTaGAGTTCTGGTGTGCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: CKVMKGQQQSVWTILDCTETIFS*SSGVQS Trigger: ACTCTGCACACCAGAACTTCAAGAGAAAATGGTCTC...GGTGCAATCAAGTATTGTCCAGACTGACTGTTGCTGGCCTTTCATGACTTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS-3UTR GCA 90 bp | ACCTTCCTAGAAAAATATTGGTTAGATAAGGCAGAGGACGGGCAGCTACTGAAGCTGGACTCCAGTCAATaGAAAAAGCTGGGCTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: TFLEKYWLDKAEDGQLLKLDSSQ*KKLGFE Trigger: TTCAAAGCCCAGCTTTTTGCATTGACTGGAGTCCAG...CTTCAGTAGCTGCCCGTCCTCTGCCTTATCTAACCAATATTTTTCTAGGAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS-3UTR GCA 90 bp | ACCTTCCTAGAAAAATATTGGTTAGATAAGGCAGAGGACGGGCAGCTACTGAAGTGTGGAAAGGCCATGTaGAGAAACTGCAGCAGAATA | + |
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Preference number: 4 (lower is better) Translates to: TFLEKYWLDKAEDGQLLKCGKAM*RNCSRI Trigger: TATTCTGCTGCAGTTTCTGCACATGGCCTTTCCACA...CTTCAGTAGCTGCCCGTCCTCTGCCTTATCTAACCAATATTTTTCTAGGAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS-3UTR GCA 90 bp | GATGTGGACAGCAGCACTGAGTTACACGAAGAGAGCAACACTTTTCCACCTTCCTACAAAGCATTTCTCTaGAGTGTTGGAGACTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: DVDSSTELHEESNTFPPSYKAFL*SVGDCL Trigger: TAAACAGTCTCCAACACTGCAGAGAAATGCTTTGTA...GGAAGGTGGAAAAGTGTTGCTCTCTTCGTGTAACTCAGTGCTGCTGTCCACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS-3UTR GCA 90 bp | AAAGTCATGAAAGGCCAGCAACAGTCAGTCTGGACAATACTTGATTGCACCCAGCTTGAAGTTCTGGTGTaGAGAGTTCATACACATCCA | + |
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Preference number: 4 (lower is better) Translates to: KVMKGQQQSVWTILDCTQLEVLV*RVHTHP Trigger: TGGATGTGTATGAACTCTGCACACCAGAACTTCAAG...CTGGGTGCAATCAAGTATTGTCCAGACTGACTGTTGCTGGCCTTTCATGACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS-3UTR CCA 90 bp | ACCTTCCTAGAAAAATATTGGTTAGATAAGGCAGAGGACGGGCAGCTACTGAAGGTTTGTCAATCCACATaGCAATTCCATAGCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: TFLEKYWLDKAEDGQLLKVCQST*QFHSGC Trigger: GCAACCGCTATGGAATTGCCATGTGGATTGACAAAC...CTTCAGTAGCTGCCCGTCCTCTGCCTTATCTAACCAATATTTTTCTAGGAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| CDS-3UTR TCA 90 bp | TGTAAAGTCATGAAAGGCCAGCAACAGTCAGTCTGGACAATACTTGATTGCACCGCAATTTCAGCCCTGTaGAAAGATACTTCACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: CKVMKGQQQSVWTILDCTAISAL*KDTSLP Trigger: AGGAAGTGAAGTATCTTTTCACAGGGCTGAAATTGC...GGTGCAATCAAGTATTGTCCAGACTGACTGTTGCTGGCCTTTCATGACTTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS-3UTR TCA 90 bp | ACCTTCCTAGAAAAATATTGGTTAGATAAGGCAGAGGACGGGCAGCTACTGAAGGCAATTTCAGCCCTGTaGAAAGATACTTCACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TFLEKYWLDKAEDGQLLKAISAL*KDTSLP Trigger: AGGAAGTGAAGTATCTTTTCACAGGGCTGAAATTGC...CTTCAGTAGCTGCCCGTCCTCTGCCTTATCTAACCAATATTTTTCTAGGAAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS-3UTR TCA 90 bp | AAAGTCATGAAAGGCCAGCAACAGTCAGTCTGGACAATACTTGATTGCACCCAGCTGGGGTTACAATGCTaGCCTTATCATCATCAAATT | + |
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Preference number: 4 (lower is better) Translates to: KVMKGQQQSVWTILDCTQLGLQC*PYHHQI Trigger: AATTTGATGATGATAAGGTCAGCATTGTAACCCCAG...CTGGGTGCAATCAAGTATTGTCCAGACTGACTGTTGCTGGCCTTTCATGACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS-3UTR GCA 90 bp | AAATCTACCTCACCTGGTTTAGTAGGAAAACACAGGTGCCAAATTCCTTCGTTCTGTGGAAAGGCCATGTaGAGAAACTGCAGCAGAATA | + |
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Preference number: 4 (lower is better) Translates to: KSTSPGLVGKHRCQIPSFCGKAM*RNCSRI Trigger: TATTCTGCTGCAGTTTCTGCACATGGCCTTTCCACA...GAACGAAGGAATTTGGCACCTGTGTTTTCCTACTAAACCAGGTGAGGTAGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| CDS-3UTR TCA 90 bp | AACCATGCAAGAACAACAGATAGGTGTGCAATAAACATCACTGCTAAAGCTTGGCAAAAAGCTGGGCTTTaGACACCATTGGAGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NHARTTDRCAINITAKAWQKAGL*TPLEVH Trigger: ATGAACCTCCAATGGTGTTCAAAGCCCAGCTTTTTG...CCAAGCTTTAGCAGTGATGTTTATTGCACACCTATCTGTTGTTCTTGCATGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR TCA 90 bp | AACCATGCAAGAACAACAGATAGGTGTGCAATAAACATCACTGCTAAAGCTTGGGAGACCATTTTCTCTTaGAGTTCTGGTGTGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NHARTTDRCAINITAKAWETIFS*SSGVQS Trigger: ACTCTGCACACCAGAACTTCAAGAGAAAATGGTCTC...CCAAGCTTTAGCAGTGATGTTTATTGCACACCTATCTGTTGTTCTTGCATGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTCCTAGAAAAATATTGGTTAGATAAGGCAGAGGACGGGCAGCTACTGAAGCTGGGGTTACAATGCTaGCCTTATCATCATCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: TFLEKYWLDKAEDGQLLKLGLQC*PYHHQI Trigger: AATTTGATGATGATAAGGTCAGCATTGTAACCCCAG...CTTCAGTAGCTGCCCGTCCTCTGCCTTATCTAACCAATATTTTTCTAGGAAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGCACTGAGTTACACGAAGAGAGCAACACTTTTCCACCTTCCTAGAAAATTTCTCTTGAAGTTCTaGTGTGCAGAGTTCATACAC | + |
|
Preference number: 4 (lower is better) Translates to: TAALSYTKRATLFHLPRKFLLKF*CAEFIH Trigger: GTGTATGAACTCTGCACACCAGAACTTCAAGAGAAA...TTTTCTAGGAAGGTGGAAAAGTGTTGCTCTCTTCGTGTAACTCAGTGCTGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CCA 90 bp | TGTAAAGTCATGAAAGGCCAGCAACAGTCAGTCTGGACAATACTTGATTGCACCAGTAGCCACAATTATTaGAGCCAATATCGTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CKVMKGQQQSVWTILDCTSSHNY*SQYRQQ Trigger: TTGCTGACGATATTGGCTCCAATAATTGTGGCTACT...GGTGCAATCAAGTATTGTCCAGACTGACTGTTGCTGGCCTTTCATGACTTTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR GCA 90 bp | AAAGTCATGAAAGGCCAGCAACAGTCAGTCTGGACAATACTTGATTGCACCCAGACTATTCTTGTCATTTaGATTTGGTTGCTGATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVMKGQQQSVWTILDCTQTILVI*IWLLIH Trigger: GTGAATCAGCAACCAAATGCAAATGACAAGAATAGT...CTGGGTGCAATCAAGTATTGTCCAGACTGACTGTTGCTGGCCTTTCATGACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR TCA 90 bp | TTAAGATTGAAGATGCACAAGTGGCTTGGTTCTGTTCTCATTTTCTTTAGAGCTCTAGATCTTCCCTGGTaGGTTAACACTGCTTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRLKMHKWLGSVLIFFRALDLPW*VNTACK Trigger: CTTACAAGCAGTGTTAACTCACCAGGGAAGATCTAG...AGCTCTAAAGAAAATGAGAACAGAACCAAGCCACTTGTGCATCTTCAATCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR TCA 90 bp | GATAGTAACCATGCAAGAACAACAGATAGGTGTGCAATAAACATCACTGCTAAACTAGATCTTCCCTGGTaGGTTAACACTGCTTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSNHARTTDRCAINITAKLDLPW*VNTACK Trigger: CTTACAAGCAGTGTTAACTCACCAGGGAAGATCTAG...TTTAGCAGTGATGTTTATTGCACACCTATCTGTTGTTCTTGCATGGTTACTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR GCA 90 bp | GATAGTAACCATGCAAGAACAACAGATAGGTGTGCAATAAACATCACTGCTAAACTGGACTCCAGTCAATaGAAAAAGCTGGGCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DSNHARTTDRCAINITAKLDSSQ*KKLGFE Trigger: TTCAAAGCCCAGCTTTTTGCATTGACTGGAGTCCAG...TTTAGCAGTGATGTTTATTGCACACCTATCTGTTGTTCTTGCATGGTTACTATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR GCA 90 bp | TGTAAAGTCATGAAAGGCCAGCAACAGTCAGTCTGGACAATACTTGATTGCACCACTATTCTTGTCATTTaGATTTGGTTGCTGATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CKVMKGQQQSVWTILDCTTILVI*IWLLIH Trigger: GTGAATCAGCAACCAAATGCAAATGACAAGAATAGT...GGTGCAATCAAGTATTGTCCAGACTGACTGTTGCTGGCCTTTCATGACTTTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGATTGAAGATGCACAAGTGGCTTGGTTCTGTTCTCATTTTCTTTAGAGCTTTTTGTCTGGCTGGCTaGACTCCAGTCAATGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRLKMHKWLGSVLIFFRAFCLAG*TPVNAK Trigger: TTTTGCATTGACTGGAGTCCAGCCAGCCAGACAAAA...AGCTCTAAAGAAAATGAGAACAGAACCAAGCCACTTGTGCATCTTCAATCTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CCA 90 bp | GATAGTAACCATGCAAGAACAACAGATAGGTGTGCAATAAACATCACTGCTAAACTTCTCTGCAAACTGTaGAAAGGCCATGTGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DSNHARTTDRCAINITAKLLCKL*KGHVQK Trigger: TTTCTGCACATGGCCTTTCCACAGTTTGCAGAGAAG...TTTAGCAGTGATGTTTATTGCACACCTATCTGTTGTTCTTGCATGGTTACTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CCA 90 bp | TGTAAAGTCATGAAAGGCCAGCAACAGTCAGTCTGGACAATACTTGATTGCACCATTTCTCTGCAGTGTTaGAGACTGTTTAGTAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CKVMKGQQQSVWTILDCTISLQC*RLFSNF Trigger: GAAATTACTAAACAGTCTCCAACACTGCAGAGAAAT...GGTGCAATCAAGTATTGTCCAGACTGACTGTTGCTGGCCTTTCATGACTTTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CCA 90 bp | AACCATGCAAGAACAACAGATAGGTGTGCAATAAACATCACTGCTAAAGCTTGGTTTCTCTTGAAGTTCTaGTGTGCAGAGTTCATACAC | + |
|
Preference number: 4 (lower is better) Translates to: NHARTTDRCAINITAKAWFLLKF*CAEFIH Trigger: GTGTATGAACTCTGCACACCAGAACTTCAAGAGAAA...CCAAGCTTTAGCAGTGATGTTTATTGCACACCTATCTGTTGTTCTTGCATGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| 3UTR CAA 72 bp | AAGTCTTTAAACACCCAGGGATTCCTGTCAGTTCACTaGAGATGTGAAAATACCCTATATGTAGCAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSLNTQGFLSVH*RCENTLYVAEH Trigger: ATGCTCTGCTACATATAGGGTATTTTCACATCTCAAGTGAACTGACAGGAATCCCTGGGTGTTTAAAGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
||
| 3UTR CAA 72 bp | TCATTTGCCAACAAACTTGGTGAGCAGTGGAAGATTTaGGCTCCTTACCTGGAAATTAAAGACTCTGATATT | + |
|
Preference number: 4 (lower is better) Translates to: SFANKLGEQWKI*APYLEIKDSDI Trigger: AATATCAGAGTCTTTAATTTCCAGGTAAGGAGCCAAAATCTTCCACTGCTCACCAAGTTTGTTGGCAAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
||
| CDS-3UTR TCA 90 bp | TTAAGATTGAAGATGCACAAGTGGCTTGGTTCTGTTCTCATTTTCTTTAGAGCTTTAGTAATTTCTTCCTaGAGTCGCAATTTCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRLKMHKWLGSVLIFFRALVISS*SRNFSP Trigger: AGGGCTGAAATTGCGACTTCAGGAAGAAATTACTAA...AGCTCTAAAGAAAATGAGAACAGAACCAAGCCACTTGTGCATCTTCAATCTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CCA 90 bp | AACCATGCAAGAACAACAGATAGGTGTGCAATAAACATCACTGCTAAAGCTTGGCAGCAGAATAATAGGTaGGATACTAGAAGAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NHARTTDRCAINITAKAWQQNNR*DTRRSF Trigger: AAAACTTCTTCTAGTATCCCACCTATTATTCTGCTG...CCAAGCTTTAGCAGTGATGTTTATTGCACACCTATCTGTTGTTCTTGCATGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGATTGAAGATGCACAAGTGGCTTGGTTCTGTTCTCATTTTCTTTAGAGCTAGTAGCCACAATTATTaGAGCCAATATCGTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRLKMHKWLGSVLIFFRASSHNY*SQYRQQ Trigger: TTGCTGACGATATTGGCTCCAATAATTGTGGCTACT...AGCTCTAAAGAAAATGAGAACAGAACCAAGCCACTTGTGCATCTTCAATCTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR GCA 90 bp | AATTGCACATCTCTATATTTTCTAGGTCCAGATGTTCGGCGAGATAAACCTATATACAAAGCATTTCTCTaGAGTGTTGGAGACTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NCTSLYFLGPDVRRDKPIYKAFL*SVGDCL Trigger: TAAACAGTCTCCAACACTGCAGAGAAATGCTTTGTA...TATAGGTTTATCTCGCCGAACATCTGGACCTAGAAAATATAGAGATGTGCAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
||
| CDS-3UTR CCA 90 bp | GATAGTAACCATGCAAGAACAACAGATAGGTGTGCAATAAACATCACTGCTAAACAGCAGAATAATAGGTaGGATACTAGAAGAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: DSNHARTTDRCAINITAKQQNNR*DTRRSF Trigger: AAAACTTCTTCTAGTATCCCACCTATTATTCTGCTG...TTTAGCAGTGATGTTTATTGCACACCTATCTGTTGTTCTTGCATGGTTACTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| 3UTR CAA 72 bp | GATCACGAATATTCAACACTTCATCCTTTCCTTAGATaGCTAAAGTTCCTGAAACATCTAAGGACTTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: DHEYSTLHPFLR*LKFLKHLRTYS Trigger: TGAGTAAGTCCTTAGATGTTTCAGGAACTTTAGCAATCTAAGGAAAGGATGAAGTGTTGAATATTCGTGATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
||
| CDS-3UTR CCA 90 bp | CACGAATATTCAACACTTCATCCTTTCCTTAGATTGCTAAAGTTCCTGAAACATATTTCTCTGCAGTGTTaGAGACTGTTTAGTAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: HEYSTLHPFLRLLKFLKHISLQC*RLFSNF Trigger: GAAATTACTAAACAGTCTCCAACACTGCAGAGAAAT...ATGTTTCAGGAACTTTAGCAATCTAAGGAAAGGATGAAGTGTTGAATATTCGTG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
||
| CDS-3UTR CAA 90 bp | GATGTGGACAGCAGCACTGAGTTACACGAAGAGAGCAACACTTTTCCACCTTCCCTGAAGATACTGCCCTaGTTCGCCCTTCTCTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: DVDSSTELHEESNTFPPSLKILP*FALLCK Trigger: TTTGCAGAGAAGGGCGAACAAGGGCAGTATCTTCAG...GGAAGGTGGAAAAGTGTTGCTCTCTTCGTGTAACTCAGTGCTGCTGTCCACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS CCA 90 bp | TCCTTCAGGGTTCCTCCTTTCACCATAACTTTTTGTCTGGCTGGCTaGACTCCAGTCAATGCAAAAAGCTGGGCTTTGAACACCATTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SFRVPPFTITFCLAG*TPVNAKSWALNTIG Trigger: TCCAATGGTGTTCAAAGCCCAGCTTTTTGCATTGACTGGAGTCCAGCCAGCCAGACAAAAAGTTATGGTGAAAGGAGGAACCCTGAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS GCA 90 bp | TACTGCCCTTGTTCGCCCTTCTCTGCAAACTGTGGAAAGGCCATGTaGAGAAACTGCAGCAGAATAATAGGTGGGATACTAGAAGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: YCPCSPFSANCGKAM*RNCSRIIGGILEEV Trigger: AACTTCTTCTAGTATCCCACCTATTATTCTGCTGCAGTTTCTGCACATGGCCTTTCCACAGTTTGCAGAGAAGGGCGAACAAGGGCAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS CCA 90 bp | ATCATCCTTCAGGGTTCCTCCTTTCACCATAACTTTTTGTCTGGCTaGCTGGACTCCAGTCAATGCAAAAAGCTGGGCTTTGAACACCAT | + |
|
Preference number: 5 (lower is better) Translates to: IILQGSSFHHNFLSG*LDSSQCKKLGFEHH Trigger: ATGGTGTTCAAAGCCCAGCTTTTTGCATTGACTGGAGTCCAGCCAGCCAGACAAAAAGTTATGGTGAAAGGAGGAACCCTGAAGGATGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTCATGAAAGGCCAGCAACAGTCAGTCTGGACAATACTTGATTGCACCCAGGCAAAAAGCTGGGCTTaGAACACCATTGGAGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KVMKGQQQSVWTILDCTQAKSWA*NTIGGS Trigger: TGAACCTCCAATGGTGTTCAAAGCCCAGCTTTTTGC...CTGGGTGCAATCAAGTATTGTCCAGACTGACTGTTGCTGGCCTTTCATGACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTCATGAAAGGCCAGCAACAGTCAGTCTGGACAATACTTGATTGCACCCAGTTTCACCATAACTTTTaGTCTGGCTGGCTGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: KVMKGQQQSVWTILDCTQFHHNF*SGWLDS Trigger: GGAGTCCAGCCAGCCAGACAAAAAGTTATGGTGAAA...CTGGGTGCAATCAAGTATTGTCCAGACTGACTGTTGCTGGCCTTTCATGACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTCCTAGAAAAATATTGGTTAGATAAGGCAGAGGACGGGCAGCTACTGAAGCTGAAGATACTGCCCTaGTTCGCCCTTCTCTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TFLEKYWLDKAEDGQLLKLKILP*FALLCK Trigger: TTTGCAGAGAAGGGCGAACAAGGGCAGTATCTTCAG...CTTCAGTAGCTGCCCGTCCTCTGCCTTATCTAACCAATATTTTTCTAGGAAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CAA 90 bp | GATGTGGACAGCAGCACTGAGTTACACGAAGAGAGCAACACTTTTCCACCTTCCTTCGGAGGACTATTCTaGTCATTTGCATTTGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DVDSSTELHEESNTFPPSFGGLF*SFAFGC Trigger: GCAACCAAATGCAAATGACAAGAATAGTCCTCCGAA...GGAAGGTGGAAAAGTGTTGCTCTCTTCGTGTAACTCAGTGCTGCTGTCCACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS CCA 90 bp | CTGGTGCAGATGAAGAATCCGTCTCTCTACCAGAATCATCCTCTATaGCTTCTAGTTTCTGTTGCAGGACTCTCATCATTTGTATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVQMKNPSLYQNHPL*LLVSVAGLSSFVSS Trigger: GCTGGATACAAATGATGAGAGTCCTGCAACAGAAACTAGAAGCCATAGAGGATGATTCTGGTAGAGAGACGGATTCTTCATCTGCACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS CCA 90 bp | AGCAATGTGCCAGTCTCCACCACCAGACAGCCGCAGAATATCTTCTaGGGTTACAATGCTGACCTTATCATCATCAAATTTGATCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SNVPVSTTRQPQNIF*GYNADLIIIKFDPF Trigger: GAATGGATCAAATTTGATGATGATAAGGTCAGCATTGTAACCCCAGAAGATATTCTGCGGCTGTCTGGTGGTGGAGACTGGCACATTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTCCTAGAAAAATATTGGTTAGATAAGGCAGAGGACGGGCAGCTACTGAAGGCAAAAAGCTGGGCTTaGAACACCATTGGAGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TFLEKYWLDKAEDGQLLKAKSWA*NTIGGS Trigger: TGAACCTCCAATGGTGTTCAAAGCCCAGCTTTTTGC...CTTCAGTAGCTGCCCGTCCTCTGCCTTATCTAACCAATATTTTTCTAGGAAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTCCTTGTTGCCTGGCAAGATCAAGAAGGAGTTCATGCAACAACTGATAACCAGGACTCTCATCATTaGTATCCAGCATTCGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: QLLVAWQDQEGVHATTDNQDSHH*YPAFVS Trigger: GCTAACGAATGCTGGATACAAATGATGAGAGTCCTG...GTTATCAGTTGTTGCATGAACTCCTTCTTGATCTTGCCAGGCAACAAGGAGCTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
||
| CDS-3UTR CAA 90 bp | GATGTGGACAGCAGCACTGAGTTACACGAAGAGAGCAACACTTTTCCACCTTCCACATCCTTAAGAACTTaGGCGTTCACAGATTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DVDSSTELHEESNTFPPSTSLRT*AFTDSF Trigger: GAAAGAATCTGTGAACGCCAAAGTTCTTAAGGATGT...GGAAGGTGGAAAAGTGTTGCTCTCTTCGTGTAACTCAGTGCTGCTGTCCACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS CCA 90 bp | TGGCTGGACTCCAGTCAATGCAAAAAGCTGGGCTTTGAACACCATTaGAGGTTCATCAGTATTCAATTCTACACCTTCAAACTTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: WLDSSQCKKLGFEHH*RFISIQFYTFKLLL Trigger: AAGGAGAAGTTTGAAGGTGTAGAATTGAATACTGATGAACCTCCAATGGTGTTCAAAGCCCAGCTTTTTGCATTGACTGGAGTCCAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCAGCACTGAGTTACACGAAGAGAGCAACACTTTTCCACCTTCCTAGAAAATTCGGAGGACTATTCTaGTCATTTGCATTTGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TAALSYTKRATLFHLPRKFGGLF*SFAFGC Trigger: GCAACCAAATGCAAATGACAAGAATAGTCCTCCGAA...TTTTCTAGGAAGGTGGAAAAGTGTTGCTCTCTTCGTGTAACTCAGTGCTGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CAA 90 bp | TTAAGATTGAAGATGCACAAGTGGCTTGGTTCTGTTCTCATTTTCTTTAGAGCTTTTCACCATAACTTTTaGTCTGGCTGGCTGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRLKMHKWLGSVLIFFRAFHHNF*SGWLDS Trigger: GGAGTCCAGCCAGCCAGACAAAAAGTTATGGTGAAA...AGCTCTAAAGAAAATGAGAACAGAACCAAGCCACTTGTGCATCTTCAATCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS CCA 90 bp | GCTGATCTTAGAAGATTTGATGTACAAAGCATTTCTCTGCAGTGTTaGAGACTGTTTAGTAATTTCTTCCTGAAGTCGCAATTTCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ADLRRFDVQSISLQC*RLFSNFFLKSQFQP Trigger: GGGCTGAAATTGCGACTTCAGGAAGAAATTACTAAACAGTCTCCAACACTGCAGAGAAATGCTTTGTACATCAAATCTTCTAAGATCAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CAA 90 bp | ACACAAACTATTACAGTACACACAGCACTGTTTCATTCCATGTTTCACTCCCCAAAGTGTTACCAAGGTTaGTCAATCCACATGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: TQTITVHTALFHSMFHSPKCYQG*SIHMAI Trigger: AATTGCCATGTGGATTGACAAACCTTGGTAACACTT...TGGGGAGTGAAACATGGAATGAAACAGTGCTGTGTGTACTGTAATAGTTTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
||
| CDS-3UTR CAA 90 bp | GATAGTAACCATGCAAGAACAACAGATAGGTGTGCAATAAACATCACTGCTAAACTTTTAAGGGCATCTTaGAGTTCAGGCACAGAACGA | + |
|
Preference number: 5 (lower is better) Translates to: DSNHARTTDRCAINITAKLLRAS*SSGTER Trigger: TCGTTCTGTGCCTGAACTCAAAGATGCCCTTAAAAG...TTTAGCAGTGATGTTTATTGCACACCTATCTGTTGTTCTTGCATGGTTACTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CAA 90 bp | TTAAGATTGAAGATGCACAAGTGGCTTGGTTCTGTTCTCATTTTCTTTAGAGCTCAGGACTCTCATCATTaGTATCCAGCATTCGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRLKMHKWLGSVLIFFRAQDSHH*YPAFVS Trigger: GCTAACGAATGCTGGATACAAATGATGAGAGTCCTG...AGCTCTAAAGAAAATGAGAACAGAACCAAGCCACTTGTGCATCTTCAATCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
||
| CDS-3UTR CAA 90 bp | AACCATGCAAGAACAACAGATAGGTGTGCAATAAACATCACTGCTAAAGCTTGGACATCCTTAAGAACTTaGGCGTTCACAGATTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NHARTTDRCAINITAKAWTSLRT*AFTDSF Trigger: GAAAGAATCTGTGAACGCCAAAGTTCTTAAGGATGT...CCAAGCTTTAGCAGTGATGTTTATTGCACACCTATCTGTTGTTCTTGCATGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS-3UTR CAA 90 bp | GATAGTAACCATGCAAGAACAACAGATAGGTGTGCAATAAACATCACTGCTAAAAGAGACCATTTTCTCTaGAAGTTCTGGTGTGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: DSNHARTTDRCAINITAKRDHFL*KFWCAE Trigger: CTCTGCACACCAGAACTTCAAGAGAAAATGGTCTCT...TTTAGCAGTGATGTTTATTGCACACCTATCTGTTGTTCTTGCATGGTTACTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS-3UTR CAA 90 bp | CACGAATATTCAACACTTCATCCTTTCCTTAGATTGCTAAAGTTCCTGAAACATCTTTTAAGGGCATCTTaGAGTTCAGGCACAGAACGA | + |
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Preference number: 5 (lower is better) Translates to: HEYSTLHPFLRLLKFLKHLLRAS*SSGTER Trigger: TCGTTCTGTGCCTGAACTCAAAGATGCCCTTAAAAG...ATGTTTCAGGAACTTTAGCAATCTAAGGAAAGGATGAAGTGTTGAATATTCGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092096.14 |
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| CDS-3UTR CAA 90 bp | AACCATGCAAGAACAACAGATAGGTGTGCAATAAACATCACTGCTAAAGCTTGGGACTATTCTTGTCATTaGCATTTGGTTGCTGATTCA | + |
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Preference number: 5 (lower is better) Translates to: NHARTTDRCAINITAKAWDYSCH*HLVADS Trigger: TGAATCAGCAACCAAATGCAAATGACAAGAATAGTC...CCAAGCTTTAGCAGTGATGTTTATTGCACACCTATCTGTTGTTCTTGCATGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS-3UTR CAA 90 bp | TTAAGATTGAAGATGCACAAGTGGCTTGGTTCTGTTCTCATTTTCTTTAGAGCTGACTATTCTTGTCATTaGCATTTGGTTGCTGATTCA | + |
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Preference number: 5 (lower is better) Translates to: LRLKMHKWLGSVLIFFRADYSCH*HLVADS Trigger: TGAATCAGCAACCAAATGCAAATGACAAGAATAGTC...AGCTCTAAAGAAAATGAGAACAGAACCAAGCCACTTGTGCATCTTCAATCTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS CAA 72 bp | CCAGCATTCGTTAGCATCCTGCTGAAGATACTGCCCTaGTTCGCCCTTCTCTGCAAACTGTGGAAAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PAFVSILLKILP*FALLCKLWKGH Trigger: ATGGCCTTTCCACAGTTTGCAGAGAAGGGCGAACAAGGGCAGTATCTTCAGCAGGATGCTAACGAATGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS CCA 72 bp | CAGGGTTCCTCCTTTCACCATAACTTTTTGTCTGGCTaGCTGGACTCCAGTCAATGCAAAAAGCTGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: QGSSFHHNFLSG*LDSSQCKKLGF Trigger: AAAGCCCAGCTTTTTGCATTGACTGGAGTCCAGCCAGCCAGACAAAAAGTTATGGTGAAAGGAGGAACCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS GCA 72 bp | CATAACTTTTTGTCTGGCTGGCTGGACTCCAGTCAATaGAAAAAGCTGGGCTTTGAACACCATTGGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: HNFLSGWLDSSQ*KKLGFEHHWRF Trigger: GAACCTCCAATGGTGTTCAAAGCCCAGCTTTTTGCATTGACTGGAGTCCAGCCAGCCAGACAAAAAGTTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS GCA 72 bp | TGTTCGCCCTTCTCTGCAAACTGTGGAAAGGCCATGTaGAGAAACTGCAGCAGAATAATAGGTGGGATACTA | + |
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Preference number: 6 (lower is better) Translates to: CSPFSANCGKAM*RNCSRIIGGIL Trigger: TAGTATCCCACCTATTATTCTGCTGCAGTTTCTGCACATGGCCTTTCCACAGTTTGCAGAGAAGGGCGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS CCA 72 bp | GTTCCTCCTTTCACCATAACTTTTTGTCTGGCTGGCTaGACTCCAGTCAATGCAAAAAGCTGGGCTTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: VPPFTITFCLAG*TPVNAKSWALN Trigger: GTTCAAAGCCCAGCTTTTTGCATTGACTGGAGTCCAGCCAGCCAGACAAAAAGTTATGGTGAAAGGAGGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS CCA 72 bp | CCAGTCTCCACCACCAGACAGCCGCAGAATATCTTCTaGGGTTACAATGCTGACCTTATCATCATCAAATTT | + |
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Preference number: 6 (lower is better) Translates to: PVSTTRQPQNIF*GYNADLIIIKF Trigger: AAATTTGATGATGATAAGGTCAGCATTGTAACCCCAGAAGATATTCTGCGGCTGTCTGGTGGTGGAGACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS CAA 72 bp | ATCATCCTTCAGGGTTCCTCCTTTCACCATAACTTTTaGTCTGGCTGGCTGGACTCCAGTCAATGCAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: IILQGSSFHHNF*SGWLDSSQCKK Trigger: CTTTTTGCATTGACTGGAGTCCAGCCAGCCAGACAAAAAGTTATGGTGAAAGGAGGAACCCTGAAGGATGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS TCA 72 bp | GCTTTTCTTTTTAGAAGGTGTCACCGCTGGTGCAGATaGAGAATCCGTCTCTCTACCAGAATCATCCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: AFLFRRCHRWCR*RIRLSTRIILY Trigger: ATAGAGGATGATTCTGGTAGAGAGACGGATTCTTCATCTGCACCAGCGGTGACACCTTCTAAAAAGAAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS GCA 72 bp | TTCTCTGCAAACTGTGGAAAGGCCATGTGCAGAAACTaGAGCAGAATAATAGGTGGGATACTAGAAGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: FSANCGKAMCRN*SRIIGGILEEV Trigger: AACTTCTTCTAGTATCCCACCTATTATTCTGCTGCAGTTTCTGCACATGGCCTTTCCACAGTTTGCAGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS GCA 72 bp | CTACCAGAATCATCCTCTATGGCTTCTAGTTTCTGTTaGAGGACTCTCATCATTTGTATCCAGCATTCGTTA | + |
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Preference number: 6 (lower is better) Translates to: LPESSSMASSFC*RTLIICIQHSL Trigger: TAACGAATGCTGGATACAAATGATGAGAGTCCTGCAACAGAAACTAGAAGCCATAGAGGATGATTCTGGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS CCA 72 bp | ATGAAGAATCCGTCTCTCTACCAGAATCATCCTCTATaGCTTCTAGTTTCTGTTGCAGGACTCTCATCATTT | + |
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Preference number: 6 (lower is better) Translates to: MKNPSLYQNHPL*LLVSVAGLSSF Trigger: AAATGATGAGAGTCCTGCAACAGAAACTAGAAGCCATAGAGGATGATTCTGGTAGAGAGACGGATTCTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS CCA 72 bp | TCCAGTCAATGCAAAAAGCTGGGCTTTGAACACCATTaGAGGTTCATCAGTATTCAATTCTACACCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SSQCKKLGFEHH*RFISIQFYTFK Trigger: TTTGAAGGTGTAGAATTGAATACTGATGAACCTCCAATGGTGTTCAAAGCCCAGCTTTTTGCATTGACTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS CAA 90 bp | CCCTGTGAAAAGATACTTCACTTCCTGGTTAATGAAACAACTAAGTaGAAGTTGATTTTCCTTTCCTTTGGTGACCTCTTCTTCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: PCEKILHFLVNETTK*KLIFLSFGDLFFFR Trigger: TCTGAAGAAGAAGAGGTCACCAAAGGAAAGGAAAATCAACTTCAACTTAGTTGTTTCATTAACCAGGAAGTGAAGTATCTTTTCACAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS CCA 72 bp | AGAAGATTTGATGTACAAAGCATTTCTCTGCAGTGTTaGAGACTGTTTAGTAATTTCTTCCTGAAGTCGCAA | + |
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Preference number: 6 (lower is better) Translates to: RRFDVQSISLQC*RLFSNFFLKSQ Trigger: TTGCGACTTCAGGAAGAAATTACTAAACAGTCTCCAACACTGCAGAGAAATGCTTTGTACATCAAATCTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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| CDS CCA 72 bp | TTAACACTGCTTGTAAGTCATAGTAGCCACAATTATTaGAGCCAATATCGTCAGCAAATGAAAAGGGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: LTLLVSHSSHNY*SQYRQQMKRVH Trigger: ATGAACCCTTTTCATTTGCTGACGATATTGGCTCCAATAATTGTGGCTACTATGACTTACAAGCAGTGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092096.14 ENSMUST00000116669.2 |
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