Pregenerated sensors for USP13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056900Ensembl transcript IDs: ENSMUST00000072312.12, ENSMUST00000108228.8, ENSMUST00000156769.2, ENSMUST00000172481.2
Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCAGGCTTACATGGGATCTTCCTTGAGACAGGGCCCCGGGGTTTaGACTCTGACTGGTCAGACTCCTCCTGTCCCAACCCAATGCCTC | + |
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Preference number: 1 (lower is better) Translates to: AQAYMGSSLRQGPGV*TLTGQTPPVPTQCL Trigger: GAGGCATTGGGTTGGGACAGGAGGAGTCTGACCAGTCAGAGTTCAAACCCCGGGGCCCTGTCTCAAGGAAGATCCCATGTAAGCCTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR CCA 90 bp | AATACCAAGTCTTCCAGCACCCAACAGTTAACACTGCTGGGCAGGTaGGCACAGGTCAGGCTCAGCCTCTGTGCGAGCGGAGGAGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: NTKSSSTQQLTLLGR*AQVRLSLCASGGAE Trigger: CTCAGCTCCTCCGCTCGCACAGAGGCTGAGCCTGACCTGTGCCCACCTGCCCAGCAGTGTTAACTGTTGGGTGCTGGAAGACTTGGTATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR CCA 90 bp | GACCTACCACGTTCTACCTTCTGTTCTGTGAAGGTTCTTCAGAACTaGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACC | + |
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Preference number: 1 (lower is better) Translates to: DLPRSTFCSVKVLQN*PKPARRGGRGCHLT Trigger: GGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTGAAGAACCTTCACAGAACAGAAGGTAGAACGTGGTAGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR TCA 90 bp | GCACATTCACAACTCTACTCTGTTCTCAGGCCACGGCTAGGACACTaGAATGACCAGGTGGGAAGGCTGGCATTGCAGCTGCGACAGAAA | + |
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Preference number: 1 (lower is better) Translates to: AHSQLYSVLRPRLGH*NDQVGRLALQLRQK Trigger: TTTCTGTCGCAGCTGCAATGCCAGCCTTCCCACCTGGTCATTTCAGTGTCCTAGCCGTGGCCTGAGAACAGAGTAGAGTTGTGAATGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR GCA 90 bp | ATTGCAGCTGCGACAGAAACATCTCTGCAGTTCTCATCCTTAAAGTaGCCAAGGTTGCACCATGGGCCACAGCAGATAGGCAGTGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: IAAATETSLQFSSLK*PRLHHGPQQIGSEG Trigger: GCCCTCACTGCCTATCTGCTGTGGCCCATGGTGCAACCTTGGGCACTTTAAGGATGAGAACTGCAGAGATGTTTCTGTCGCAGCTGCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR GCA 90 bp | ACAAGACTCTTCTTGCAGCTTCTGGGCCCTGCCCTGTGCTTCACGTaGTCCCTAATCCAGCAAAACCATCCATGTTGCTCCGATTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: TRLFLQLLGPALCFT*SLIQQNHPCCSDFG Trigger: TCCAAAATCGGAGCAACATGGATGGTTTTGCTGGATTAGGGAGCACGTGAAGCACAGGGCAGGGCCCAGAAGCTGCAAGAAGAGTCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR CCA 90 bp | CACGTGCTCCCTAATCCAGCAAAACCATCCATGTTGCTCCGATTTTaGAGCCTCTGCAGGTTCCTGTCTTACCCATGGGATTTCACGGTG | + |
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Preference number: 1 (lower is better) Translates to: HVLPNPAKPSMLLRF*SLCRFLSYPWDFTV Trigger: CACCGTGAAATCCCATGGGTAAGACAGGAACCTGCAGAGGCTCCAAAATCGGAGCAACATGGATGGTTTTGCTGGATTAGGGAGCACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR TCA 90 bp | GCAGTACACTCTAATGGGACCTACCACGTTCTACCTTCTGTTCTGTaGAGGTTCTTCAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: AVHSNGTYHVLPSVL*RFFRTGQSLLEGVE Trigger: TTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTGAAGAACCTTCACAGAACAGAAGGTAGAACGTGGTAGGTCCCATTAGAGTGTACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR TCA 90 bp | GTTCTAGTGTGCGTTTTATGTATGTGGAACAATCTGAGTGTGGGCTaGCCAAATCCCACCACACTGGAGGGCTACAGAACCTTCCACCAA | + |
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Preference number: 1 (lower is better) Translates to: VLVCVLCMWNNLSVG*PNPTTLEGYRTFHQ Trigger: TTGGTGGAAGGTTCTGTAGCCCTCCAGTGTGGTGGGATTTGGTCAGCCCACACTCAGATTGTTCCACATACATAAAACGCACACTAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR CCA 90 bp | ACCCTTTGTAGGACAGACAGCTTTGGCAGCATGTATCTGGGGATCTaGGCTAGCAACAGTGGACTTGGGATTTCAAAATATTTGTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: TLCRTDSFGSMYLGI*ASNSGLGISKYLCG Trigger: CCCACACAAATATTTTGAAATCCCAAGTCCACTGTTGCTAGCCCAGATCCCCAGATACATGCTGCCAAAGCTGTCTGTCCTACAAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR TCA 90 bp | TCCACCAGCTTCACTGCACAGACCTTGTTCTGTTCCCTGGGATACTaGCTTAACAGGCAGAAGCACATTATATGTAATGCCATCCTCTGT | + |
|
Preference number: 1 (lower is better) Translates to: STSFTAQTLFCSLGY*LNRQKHIICNAILC Trigger: ACAGAGGATGGCATTACATATAATGTGCTTCTGCCTGTTAAGTCAGTATCCCAGGGAACAGAACAAGGTCTGTGCAGTGAAGCTGGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR TCA 90 bp | AAATTTCAGAGACCAGAAAAACAGACAAACCACGGCCATCTAACATaGTCCCAGGGAGTGAGCATGATCTCGAGAGGCCAGATGTTTAAC | + |
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Preference number: 1 (lower is better) Translates to: KFQRPEKQTNHGHLT*SQGVSMISRGQMFN Trigger: GTTAAACATCTGGCCTCTCGAGATCATGCTCACTCCCTGGGATCATGTTAGATGGCCGTGGTTTGTCTGTTTTTCTGGTCTCTGAAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR CCA 90 bp | CTAGCTATGCTCAGACCAGACAACAGTGGAGATTTCCATGTTAAATaGCCAGCACATGTAATCAAGTATCCCACATCATTTGCAGTAGTC | + |
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Preference number: 1 (lower is better) Translates to: LAMLRPDNSGDFHVK*PAHVIKYPTSFAVV Trigger: GACTACTGCAAATGATGTGGGATACTTGATTACATGTGCTGGCCATTTAACATGGAAATCTCCACTGTTGTCTGGTCTGAGCATAGCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR CAA 90 bp | AGCCCAGGCTTACATGGGATCTTCCTTGAGACAGGGCCCCGGGGTTaGAACTCTGACTGGTCAGACTCCTCCTGTCCCAACCCAATGCCT | + |
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Preference number: 2 (lower is better) Translates to: SPGLHGIFLETGPRG*NSDWSDSSCPNPMP Trigger: AGGCATTGGGTTGGGACAGGAGGAGTCTGACCAGTCAGAGTTCAAACCCCGGGGCCCTGTCTCAAGGAAGATCCCATGTAAGCCTGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR CAA 90 bp | GCGACAGAAACATCTCTGCAGTTCTCATCCTTAAAGTGCCCAAGGTaGCACCATGGGCCACAGCAGATAGGCAGTGAGGGCAGAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: ATETSLQFSSLKCPR*HHGPQQIGSEGRGK Trigger: TTTCCCTCTGCCCTCACTGCCTATCTGCTGTGGCCCATGGTGCAACCTTGGGCACTTTAAGGATGAGAACTGCAGAGATGTTTCTGTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR TCA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCTGCCAGTCCAGGTTTTaGTGTCCTATATGGAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: QNWPKPARRGGRGCHLTTCQSRF*CPIWKN Trigger: ATTTTTCCATATAGGACATCAAAACCTGGACTGGCA...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR GCA 90 bp | TGGGACCTACCACGTTCTACCTTCTGTTCTGTGAAGGTTCTTCAGAACTGGCCAGGCTGGCATTGCAGCTaGGACAGAAACATCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: WDLPRSTFCSVKVLQNWPGWHCS*DRNISA Trigger: TGCAGAGATGTTTCTGTCGCAGCTGCAATGCCAGCC...TGGCCAGTTCTGAAGAACCTTCACAGAACAGAAGGTAGAACGTGGTAGGTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR CCA 90 bp | TGGGACCTACCACGTTCTACCTTCTGTTCTGTGAAGGTTCTTCAGAACTGGCCAACTGAAATGACCAGGTaGGAAGGCTGGCATTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: WDLPRSTFCSVKVLQNWPTEMTR*EGWHCS Trigger: GCTGCAATGCCAGCCTTCCCACCTGGTCATTTCAGT...TGGCCAGTTCTGAAGAACCTTCACAGAACAGAAGGTAGAACGTGGTAGGTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR GCA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAAAGATCTTTGAGGGACTaGGCTCCCAGCTGCCCCGGG | + |
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Preference number: 2 (lower is better) Translates to: SKYLCGFEWLRGILRLFQRSLRD*APSCPG Trigger: CCCGGGGCAGCTGGGAGCGCAGTCCCTCAAAGATCT...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR GCA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATGGGAGCCCAAGGGGATaGAGGGGAAGCAGCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNGSPRG*RGSSRH Trigger: GTGCCTGCTGCTTCCCCTGCATCCCCTTGGGCTCCC...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR TCA 90 bp | ACTAACGGGAGGGCCTTAGCCATACCTCTAAATTATTCACTAGCTATGCTCAGATTCAGGTTCTTGCCTTaGGGTCCTGCCCTGACTTCC | + |
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Preference number: 2 (lower is better) Translates to: TNGRALAIPLNYSLAMLRFRFLP*GPALTS Trigger: GGAAGTCAGGGCAGGACCTCAAGGCAAGAACCTGAA...TCTGAGCATAGCTAGTGAATAATTTAGAGGTATGGCTAAGGCCCTCCCGTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR GCA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATGAGACAGCACCCAGATaGACCCAGGCCTCTAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNETAPR*TQASSP Trigger: GGGGCTAGAGGCCTGGGTGCATCTGGGTGCTGTCTC...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR TCA 90 bp | TGGGACCTACCACGTTCTACCTTCTGTTCTGTGAAGGTTCTTCAGAACTGGCCAACTTACTGTGGGAAATaGAGACACAATGCCACCAGT | + |
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Preference number: 2 (lower is better) Translates to: WDLPRSTFCSVKVLQNWPTYCGK*RHNATS Trigger: ACTGGTGGCATTGTGTCTTCATTTCCCACAGTAAGT...TGGCCAGTTCTGAAGAACCTTCACAGAACAGAAGGTAGAACGTGGTAGGTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR TCA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAACCACGGCTAGGACACTaGAATGACCAGGTGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: SKYLCGFEWLRGILRLFQPRLGH*NDQVGR Trigger: CCTTCCCACCTGGTCATTTCAGTGTCCTAGCCGTGG...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR CCA 90 bp | GAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTATTTCAACCAAGACCAGGTGGGAAGGCTaGCATTGCAGCTGCGACAGA | + |
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Preference number: 2 (lower is better) Translates to: ENLYQTGSLTGYLGISTKTRWEG*HCSCDR Trigger: TCTGTCGCAGCTGCAATGCCAGCCTTCCCACCTGGT...CTTGGTTGAAATACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR TCA 90 bp | GAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTATTTCAACCAAGGCCGTGAATAGCCCTTaGGTTTGTGAGGCAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: ENLYQTGSLTGYLGISTKAVNSP*VCEAGK Trigger: CTTCCCTGCCTCACAAACTCAAGGGCTATTCACGGC...CTTGGTTGAAATACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR CCA 90 bp | GAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTATTTCAACCAAGGGGCAGAGGGAAAGCTaGCCCCAGAGAAGTAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: ENLYQTGSLTGYLGISTKGQRES*PQRSRD Trigger: ATCTCTACTTCTCTGGGGCCAGCTTTCCCTCTGCCC...CTTGGTTGAAATACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR CCA 90 bp | ACTAACGGGAGGGCCTTAGCCATACCTCTAAATTATTCACTAGCTATGCTCAGAAAGACTCCTAGCAGGTaGGTTAGCAGACACAACCCA | + |
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Preference number: 2 (lower is better) Translates to: TNGRALAIPLNYSLAMLRKTPSR*VSRHNP Trigger: TGGGTTGTGTCTGCTAACCCACCTGCTAGGAGTCTT...TCTGAGCATAGCTAGTGAATAATTTAGAGGTATGGCTAAGGCCCTCCCGTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR TCA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATCACGGCCATCTAACATaGTCCCAGGGAGTGAGCATG | + |
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Preference number: 2 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNHGHLT*SQGVSM Trigger: CATGCTCACTCCCTGGGATCATGTTAGATGGCCGTG...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR GCA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATTGGGAAGGCTGGCATTaGAGCTGCGACAGAAACATC | + |
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Preference number: 2 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNWEGWH*SCDRNI Trigger: GATGTTTCTGTCGCAGCTGCAATGCCAGCCTTCCCA...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR TCA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATAAACTGAGGCATAGATaGAAGGAAGGACTGGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNKLRHR*KEGLAP Trigger: AGGGGCCAGTCCTTCCTTTCATCTATGCCTCAGTTT...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR TCA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAACTACCTTCTGTTCTGTaGAGGTTCTTCAGAACTGGC | + |
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Preference number: 2 (lower is better) Translates to: SKYLCGFEWLRGILRLFQLPSVL*RFFRTG Trigger: GCCAGTTCTGAAGAACCTTCACAGAACAGAAGGTAG...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR TCA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAAACCATAGCTCATGTCTaGTTCTGGTTGGAACCACAG | + |
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Preference number: 2 (lower is better) Translates to: SKYLCGFEWLRGILRLFQTIAHV*FWLEPQ Trigger: CTGTGGTTCCAACCAGAATCAGACATGAGCTATGGT...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR CCA 90 bp | ACTAACGGGAGGGCCTTAGCCATACCTCTAAATTATTCACTAGCTATGCTCAGATCCCCAAGTTGTTTTTaGCCATGGTCTTTATTCCAC | + |
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Preference number: 2 (lower is better) Translates to: TNGRALAIPLNYSLAMLRSPSCF*PWSLFH Trigger: GTGGAATAAAGACCATGGCCAAAAACAACTTGGGGA...TCTGAGCATAGCTAGTGAATAATTTAGAGGTATGGCTAAGGCCCTCCCGTTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR CCA 90 bp | ACTAACGGGAGGGCCTTAGCCATACCTCTAAATTATTCACTAGCTATGCTCAGATGCGTTTTATGTATGTaGAACAATCTGAGTGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: TNGRALAIPLNYSLAMLRCVLCM*NNLSVG Trigger: GCCCACACTCAGATTGTTCCACATACATAAAACGCA...TCTGAGCATAGCTAGTGAATAATTTAGAGGTATGGCTAAGGCCCTCCCGTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR CAA 90 bp | TCCATTTGTTCAATGATCTGGACCAGAAACTCCAGAGGCTGGGATTaGATGAAAAGTAATAACAAAAATCACAGAGAGCGCTCGTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SICSMIWTRNSRGWD*MKSNNKNHRERSFL Trigger: CAGGAACGAGCGCTCTCTGTGATTTTTGTTATTACTTTTCATCAAATCCCAGCCTCTGGAGTTTCTGGTCCAGATCATTGAACAAATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR CAA 90 bp | GAGGCAGGGAAGAGGCAGCCATTATACACTTTCTTGAAATACGTCTaGGTGCCAGAAGGGTTAATTTGCTTCTTCTACCTAATGAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: EAGKRQPLYTFLKYV*VPEGLICFFYLMKL Trigger: TAACTTCATTAGGTAGAAGAAGCAAATTAACCCTTCTGGCACCAAGACGTATTTCAAGAAAGTGTATAATGGCTGCCTCTTCCCTGCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR GCA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATTTCTCATCCTTAAAGTaGCCAAGGTTGCACCATGGG | + |
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Preference number: 2 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNFSSLK*PRLHHG Trigger: CCCATGGTGCAACCTTGGGCACTTTAAGGATGAGAA...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR GCA 90 bp | GAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTATTTCAACCAAGCACGTGAAAGGCCTTTaGTTTGTAACACTGCAAACC | + |
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Preference number: 2 (lower is better) Translates to: ENLYQTGSLTGYLGISTKHVKGL*FVTLQT Trigger: GGTTTGCAGTGTTACAAAGCAAAGGCCTTTCACGTG...CTTGGTTGAAATACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR CCA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAATCAAAGGTCCCTCAGTaGGACAGTGTCAGAATTACA | + |
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Preference number: 2 (lower is better) Translates to: SKYLCGFEWLRGILRLFQSKVPQ*DSVRIT Trigger: TGTAATTCTGACACTGTCCCACTGAGGGACCTTTGA...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR GCA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTTGTCCTCCACACAGATaGTTTCACATGGAGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LEEKENLYQTGSLTGYLGCPPHR*FHMERE Trigger: CTCTCTCTCCATGTGAAAGCATCTGTGTGGAGGACA...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR GCA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATAAAAATAGCATCCACTaGAGATGTCCCGGTACACAT | + |
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Preference number: 2 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNKNSIH*RCPGTH Trigger: ATGTGTACCGGGACATCTGCAGTGGATGCTATTTTT...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR TCA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATTTTCCATTTGTTCAATaGTCTGGACCAGAAACTCCA | + |
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Preference number: 2 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNFPFVQ*SGPETP Trigger: TGGAGTTTCTGGTCCAGATCATTGAACAAATGGAAA...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR CCA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTGGTCAGAACTTACTGTaGGAAATGAAGACACAATGC | + |
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Preference number: 2 (lower is better) Translates to: LEEKENLYQTGSLTGYLGGQNLL*EMKTQC Trigger: GCATTGTGTCTTCATTTCCCACAGTAAGTTCTGACC...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR CCA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTATTTGTTCAATGATCTaGACCAGAAACTCCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: LEEKENLYQTGSLTGYLGICSMI*TRNSRG Trigger: GCCTCTGGAGTTTCTGGTCCAGATCATTGAACAAAT...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| 3UTR-3UTR TCA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATCAACTATTTAGCCTTTaGACACCAATCCATCAGATA | + |
|
Preference number: 2 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNQLFSL*TPIHQI Trigger: TATCTGATGGATTGGTGTTCAAAGGCTAAATAGTTG...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR-3UTR GCA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTCCAGAAGGGTTAATTTaGTTCTTCTACCTAATGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LEEKENLYQTGSLTGYLGPEGLI*FFYLMK Trigger: CTTCATTAGGTAGAAGAAGCAAATTAACCCTTCTGG...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CCA 72 bp | CCTTGGTTAATGGTTGGTGGGGGAGCCAGCCCAGCATaGGTGGTCCTGGAAAGCAGGCTGAGCGAGCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PWLMVGGGASPA*VVLESRLSEQW Trigger: CCACTGCTCGCTCAGCCTGCTTTCCAGGACCACCCATGCTGGGCTGGCTCCCCCACCAACCATTAACCAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR-3UTR CAA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCACAGGGCCCCGGGGTTaGAACTCTGACTGGTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QNWPKPARRGGRGCHLTTTGPRG*NSDWSD Trigger: GTCTGACCAGTCAGAGTTCAAACCCCGGGGCCCTGT...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR TCA 72 bp | GCTGTCAGGACAGAAGCACACTTGGAGGTCTGCGGCTaGGGTAATGGGAGCCCAAGGGGATGCAGGGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: AVRTEAHLEVCG*GNGSPRGCRGS Trigger: GCTTCCCCTGCATCCCCTTGGGCTCCCATTACCTCAGCCGCAGACCTCCAAGTGTGCTTCTGTCCTGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR TCA 72 bp | GAGCCAGCCCAGCATGGGTGGTCCTGGAAAGCAGGCTaGGCGAGCAGTGGGGATCGAACCAGTAAGAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: EPAQHGWSWKAG*ASSGDRTSKKD Trigger: GTCCTTCTTACTGGTTCGATCCCCACTGCTCGCTCAGCCTGCTTTCCAGGACCACCCATGCTGGGCTGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CCA 72 bp | TCTTCCAGCACCCAACAGTTAACACTGCTGGGCAGGTaGGCACAGGTCAGGCTCAGCCTCTGTGCGAGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSSTQQLTLLGR*AQVRLSLCASG Trigger: TCCGCTCGCACAGAGGCTGAGCCTGACCTGTGCCCACCTGCCCAGCAGTGTTAACTGTTGGGTGCTGGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR TCA 72 bp | GACTGCGCTCCCAGCTGCCCCGGGCAAAGCACAGTGTaGCAAGACTTAGGCACCTGGCGTCAATGTCAAACG | + |
|
Preference number: 3 (lower is better) Translates to: DCAPSCPGQSTV*QDLGTWRQCQT Trigger: CGTTTGACATTGACGCCAGGTGCCTAAGTCTTGTCACACTGTGCTTTGCCCGGGGCAGCTGGGAGCGCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR TCA 72 bp | CCCAAGGTTGCACCATGGGCCACAGCAGATAGGCAGTaGGGGCAGAGGGAAAGCTGGCCCCAGAGAAGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: PKVAPWATADRQ*GQRESWPQRSR Trigger: TCTACTTCTCTGGGGCCAGCTTTCCCTCTGCCCTCACTGCCTATCTGCTGTGGCCCATGGTGCAACCTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR-3UTR CAA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCGTGGGAAGGCTGGCATaGCAGCTGCGACAGAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: QNWPKPARRGGRGCHLTTVGRLA*QLRQKH Trigger: ATGTTTCTGTCGCAGCTGCAATGCCAGCCTTCCCAC...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR TCA 72 bp | TACATGGGATCTTCCTTGAGACAGGGCCCCGGGGTTTaGACTCTGACTGGTCAGACTCCTCCTGTCCCAACC | + |
|
Preference number: 3 (lower is better) Translates to: YMGSSLRQGPGV*TLTGQTPPVPT Trigger: GGTTGGGACAGGAGGAGTCTGACCAGTCAGAGTTCAAACCCCGGGGCCCTGTCTCAAGGAAGATCCCATGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR GCA 72 bp | CCAGCAGTAGAGAGACTCAGGCATGTCACACCGAGATaGTGTCAGGACAGAAGCACACTTGGAGGTCTGCGG | + |
|
Preference number: 3 (lower is better) Translates to: PAVERLRHVTPR*CQDRSTLGGLR Trigger: CCGCAGACCTCCAAGTGTGCTTCTGTCCTGACAGCATCTCGGTGTGACATGCCTGAGTCTCTCTACTGCTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR TCA 72 bp | CAACTCTACTCTGTTCTCAGGCCACGGCTAGGACACTaGAATGACCAGGTGGGAAGGCTGGCATTGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QLYSVLRPRLGH*NDQVGRLALQL Trigger: CAGCTGCAATGCCAGCCTTCCCACCTGGTCATTTCAGTGTCCTAGCCGTGGCCTGAGAACAGAGTAGAGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR GCA 72 bp | TTCTTGCAGCTTCTGGGCCCTGCCCTGTGCTTCACGTaGTCCCTAATCCAGCAAAACCATCCATGTTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FLQLLGPALCFT*SLIQQNHPCCS Trigger: GGAGCAACATGGATGGTTTTGCTGGATTAGGGAGCACGTGAAGCACAGGGCAGGGCCCAGAAGCTGCAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR GCA 72 bp | TGGCACTGGGTAGGTGGTCCTATCCACCAGCTTCACTaGACAGACCTTGTTCTGTTCCCTGGGATACTGACT | + |
|
Preference number: 3 (lower is better) Translates to: WHWVGGPIHQLH*TDLVLFPGILT Trigger: AGTCAGTATCCCAGGGAACAGAACAAGGTCTGTGCAGTGAAGCTGGTGGATAGGACCACCTACCCAGTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR GCA 72 bp | ACAAGACTCTTCTTGCAGCTTCTGGGCCCTGCCCTGTaGTTCACGTGCTCCCTAATCCAGCAAAACCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: TRLFLQLLGPAL*FTCSLIQQNHP Trigger: TGGATGGTTTTGCTGGATTAGGGAGCACGTGAAGCACAGGGCAGGGCCCAGAAGCTGCAAGAAGAGTCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CCA 72 bp | TTAGGACAACAGGAAACCCTGGTGGCACTGGGTAGGTaGTCCTATCCACCAGCTTCACTGCACAGACCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LGQQETLVALGR*SYPPASLHRPC Trigger: ACAAGGTCTGTGCAGTGAAGCTGGTGGATAGGACCACCTACCCAGTGCCACCAGGGTTTCCTGTTGTCCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR GCA 72 bp | CCTAACTACAAGACTCTTCTTGCAGCTTCTGGGCCCTaGCCTGTGCTTCACGTGCTCCCTAATCCAGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PNYKTLLAASGP*PVLHVLPNPAK Trigger: TTTTGCTGGATTAGGGAGCACGTGAAGCACAGGGCAGGGCCCAGAAGCTGCAAGAAGAGTCTTGTAGTTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CCA 72 bp | CGTTCTACCTTCTGTTCTGTGAAGGTTCTTCAGAACTaGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RSTFCSVKVLQN*PKPARRGGRGC Trigger: ACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTGAAGAACCTTCACAGAACAGAAGGTAGAACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CCA 72 bp | ATCACGCCACATCTCACACAGAAGACTCCTAGCAGGTaGGTTAGCAGACACAACCCACACGTGTCCAGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: ITPHLTQKTPSR*VSRHNPHVSSL Trigger: TAGACTGGACACGTGTGGGTTGTGTCTGCTAACCCACCTGCTAGGAGTCTTCTGTGTGAGATGTGGCGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CCA 72 bp | AGAAGGAGACTTCACAGATTCTCTGGTCTAACCTCCTaGTCCAGAGACAAGGGCCCAGCAGTAGAGAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: RRRLHRFSGLTS*SRDKGPAVERL Trigger: GAGTCTCTCTACTGCTGGGCCCTTGTCTCTGGACCAGGAGGTTAGACCAGAGAATCTGTGAAGTCTCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR TCA 72 bp | AGACCAGAAAAACAGACAAACCACGGCCATCTAACATaGTCCCAGGGAGTGAGCATGATCTCGAGAGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RPEKQTNHGHLT*SQGVSMISRGQ Trigger: CTGGCCTCTCGAGATCATGCTCACTCCCTGGGATCATGTTAGATGGCCGTGGTTTGTCTGTTTTTCTGGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR GCA 72 bp | ACTCTGACTGGTCAGACTCCTCCTGTCCCAACCCAATaGCTCTCCTTTACTGAGCCCATTCTGTTCTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: TLTGQTPPVPTQ*LSFTEPILFYF Trigger: GAAGTAGAACAGAATGGGCTCAGTAAAGGAGAGGCATTGGGTTGGGACAGGAGGAGTCTGACCAGTCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CCA 72 bp | CCCTTTGTAGGACAGACAGCTTTGGCAGCATGTATCTaGGGATCTGGGCTAGCAACAGTGGACTTGGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: PFVGQTALAACI*GSGLATVDLGF Trigger: AAATCCCAAGTCCACTGTTGCTAGCCCAGATCCCCAGATACATGCTGCCAAAGCTGTCTGTCCTACAAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR TCA 72 bp | ATAGCGCACATACAAAGCCTTGCCGTGAATAGCCCTTaGGTTTGTGAGGCAGGGAAGAGGCAGCCATTATAC | + |
|
Preference number: 3 (lower is better) Translates to: IAHIQSLAVNSP*VCEAGKRQPLY Trigger: GTATAATGGCTGCCTCTTCCCTGCCTCACAAACTCAAGGGCTATTCACGGCAAGGCTTTGTATGTGCGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR TCA 72 bp | TGCGTTTTATGTATGTGGAACAATCTGAGTGTGGGCTaGCCAAATCCCACCACACTGGAGGGCTACAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: CVLCMWNNLSVG*PNPTTLEGYRT Trigger: GGTTCTGTAGCCCTCCAGTGTGGTGGGATTTGGTCAGCCCACACTCAGATTGTTCCACATACATAAAACGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CCA 72 bp | GAAGAAAGCGCTGTCCTCCACACAGATGCTTTCACATaGAGAGAGAGACACACAATCACGCCACATCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: EESAVLHTDAFT*RERHTITPHLT Trigger: TGTGAGATGTGGCGTGATTGTGTGTCTCTCTCTCCATGTGAAAGCATCTGTGTGGAGGACAGCGCTTTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CCA 72 bp | CCTAATCCAGCAAAACCATCCATGTTGCTCCGATTTTaGAGCCTCTGCAGGTTCCTGTCTTACCCATGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PNPAKPSMLLRF*SLCRFLSYPWD Trigger: ATCCCATGGGTAAGACAGGAACCTGCAGAGGCTCCAAAATCGGAGCAACATGGATGGTTTTGCTGGATTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR-3UTR CAA 90 bp | GAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTATTTCAACCAAGTTAAAGTGCCCAAGGTaGCACCATGGGCCACAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ENLYQTGSLTGYLGISTKLKCPR*HHGPQQ Trigger: CTGCTGTGGCCCATGGTGCAACCTTGGGCACTTTAA...CTTGGTTGAAATACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR-3UTR CAA 90 bp | ACTAACGGGAGGGCCTTAGCCATACCTCTAAATTATTCACTAGCTATGCTCAGATTCACTGCACAGACCTaGTTCTGTTCCCTGGGATAC | + |
|
Preference number: 3 (lower is better) Translates to: TNGRALAIPLNYSLAMLRFTAQT*FCSLGY Trigger: GTATCCCAGGGAACAGAACAAGGTCTGTGCAGTGAA...TCTGAGCATAGCTAGTGAATAATTTAGAGGTATGGCTAAGGCCCTCCCGTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR GCA 72 bp | CTAGAGCAGCTTAGCTTGCATATACCAGGAGACACATaGAAGCACATTCTAATAAGAGAGCAAGGCACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LEQLSLHIPGDT*KHILIREQGTA Trigger: GGCAGTGCCTTGCTCTCTTATTAGAATGTGCTTGCATGTGTCTCCTGGTATATGCAAGCTAAGCTGCTCTAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CCA 72 bp | CCACCAGCTTCACTGCACAGACCTTGTTCTGTTCCCTaGGATACTGACTTAACAGGCAGAAGCACATTATAT | + |
|
Preference number: 3 (lower is better) Translates to: PPASLHRPCSVP*DTDLTGRSTLY Trigger: ATATAATGTGCTTCTGCCTGTTAAGTCAGTATCCCAGGGAACAGAACAAGGTCTGTGCAGTGAAGCTGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CCA 72 bp | AATGGTTCCATTAAAATTAGCCTATGGGTAAGCCTATaGAGCAACTCCTTGGTTAATGGTTGGTGGGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: NGSIKISLWVSL*SNSLVNGWWGS Trigger: GCTCCCCCACCAACCATTAACCAAGGAGTTGCTCCATAGGCTTACCCATAGGCTAATTTTAATGGAACCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR TCA 72 bp | GTCCCTCAGTGGGACAGTGTCAGAATTACAGCATCATaGGCTATCCTCCCATCATGTCATTTATTCCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VPQWDSVRITAS*AILPSCHLFPN Trigger: ATTTGGGAATAAATGACATGATGGGAGGATAGCTCATGATGCTGTAATTCTGACACTGTCCCACTGAGGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR TCA 72 bp | TTCACTGCACAGACCTTGTTCTGTTCCCTGGGATACTaGCTTAACAGGCAGAAGCACATTATATGTAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: FTAQTLFCSLGY*LNRQKHIICNA Trigger: GGCATTACATATAATGTGCTTCTGCCTGTTAAGTCAGTATCCCAGGGAACAGAACAAGGTCTGTGCAGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR-3UTR CAA 90 bp | GAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTATTTCAACCAAGCCACGTGAAAGGCCTTaGCTTTGTAACACTGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: ENLYQTGSLTGYLGISTKPRERP*LCNTAN Trigger: GTTTGCAGTGTTACAAAGCAAAGGCCTTTCACGTGG...CTTGGTTGAAATACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CCA 72 bp | AAAGTAATAACAAAAATCACAGAGAGCGCTCGTTCCTaGCCACTGCACATTCACAACTCTACTCTGTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: KVITKITESARS*PLHIHNSTLFS Trigger: TGAGAACAGAGTAGAGTTGTGAATGTGCAGTGGCCAGGAACGAGCGCTCTCTGTGATTTTTGTTATTACTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR-3UTR CAA 90 bp | GAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTATTTCAACCAAGGCCAGAAGGGTTAATTaGCTTCTTCTACCTAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: ENLYQTGSLTGYLGISTKARRVN*LLLPNE Trigger: TTCATTAGGTAGAAGAAGCAAATTAACCCTTCTGGC...CTTGGTTGAAATACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATTCCAGAGGCTGGGATTaGATGAAAAGTAATAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNSRGWD*MKSNNK Trigger: TTTGTTATTACTTTTCATCAAATCCCAGCCTCTGGA...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCCCTGAAGGCAGGCACTaGATGGGATCTTGGCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QNWPKPARRGGRGCHLTTPEGRH*MGSWLA Trigger: TGCGAGCCAAGATCCCATTCAGTGCCTGCCTTCAGG...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR GCA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCCTCATCTTTGTTGGTTaGTGCCTCCATGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QNWPKPARRGGRGCHLTTLIFVG*CLHGHR Trigger: CCTGTGGCCATGGAGGCAGCAACCAACAAAGATGAG...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCGAGCTCAGATTTCACTaGAGGCTTCGAGTACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QNWPKPARRGGRGCHLTTELRFH*RLRVLA Trigger: GGCCAGTACTCGAAGCCTCCAGTGAAATCTGAGCTC...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | TCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTATGGGGCGCGGTCCCCCGACCTaGGCACGCGGATCGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SINWFIKRSFESSGMTMGRGPPT*ARGSWA Trigger: TGCCCACGATCCGCGTGCCCAGGTCGGGGGACCGCG...CCCCATAGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CCA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCTTAGTTCCTGACTCCTaGATCACTTCCCACTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QNWPKPARRGGRGCHLTTLVPDS*ITSHSL Trigger: CAGCGAGTGGGAAGTGATCCAGGAGTCAGGAACTAA...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCCTCCATACCCAGGTATaGCCAGTGGTTCAGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QNWPKPARRGGRGCHLTTLHTQV*PVVQQS Trigger: ACTTTGCTGAACCACTGGCCATACCTGGGTATGGAG...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR GCA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCACCTTCTCTCGCATGTaGCTCTTCAGGTGCATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QNWPKPARRGGRGCHLTTTFSRM*LFRCMY Trigger: ATACATGCACCTGAAGAGGCACATGCGAGAGAAGGT...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAACGCGGTCCCCCGACCTaGGCACGCGGATCGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKYLCGFEWLRGILRLFQRGPPT*ARGSWA Trigger: TGCCCACGATCCGCGTGCCCAGGTCGGGGGACCGCG...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCCCTCAGACACGATGTTaGCATTTGCATTGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QNWPKPARRGGRGCHLTTPQTRC*HLHCSP Trigger: TGGAGAACAATGCAAATGCCAACATCGTGTCTGAGG...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CAA 72 bp | ACATCTCTGCAGTTCTCATCCTTAAAGTGCCCAAGGTaGCACCATGGGCCACAGCAGATAGGCAGTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSLQFSSLKCPR*HHGPQQIGSEG Trigger: GCCCTCACTGCCTATCTGCTGTGGCCCATGGTGCAACCTTGGGCACTTTAAGGATGAGAACTGCAGAGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CAA 72 bp | CGCTTCTGCCTCGGTTCTCGCCTTCAGGTTCTTGCCTaGAGGTCCTGCCCTGACTTCCCTTCCTTAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RFCLGSRLQVLA*RSCPDFPSLSY Trigger: ATAACTTAAGGAAGGGAAGTCAGGGCAGGACCTCAAGGCAAGAACCTGAAGGCGAGAACCGAGGCAGAAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR GCA 90 bp | GAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTATTTCAACCAAGCTCGCCCAGGTCCCCTaGAGCCATCTTCCCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ENLYQTGSLTGYLGISTKLAQVP*SHLPAA Trigger: GGCGGCGGGAAGATGGCTGCAGGGGACCTGGGCGAG...CTTGGTTGAAATACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR GCA 90 bp | TGGGACCTACCACGTTCTACCTTCTGTTCTGTGAAGGTTCTTCAGAACTGGCCACCTGCAGACTTGGCCTaGAGAGCGCTGCTCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WDLPRSTFCSVKVLQNWPPADLA*RALLQK Trigger: TTTCTGGAGCAGCGCTCTGCAGGCCAAGTCTGCAGG...TGGCCAGTTCTGAAGAACCTTCACAGAACAGAAGGTAGAACGTGGTAGGTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CAA 72 bp | AACCTCCTGAGATGCCCCTACCCACGTGAAAGGCCTTaGCTTTGTAACACTGCAAACCAGCCACTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NLLRCPYPRERP*LCNTANQPLKV Trigger: CACCTTCAGTGGCTGGTTTGCAGTGTTACAAAGCAAAGGCCTTTCACGTGGGTAGGGGCATCTCAGGAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | TCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTATGGGGCTGCCCCATCAGGTGTaGTGGTGCCCAGCTTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SINWFIKRSFESSGMTMGLPHQV*WCPASR Trigger: CCGTGAAGCTGGGCACCATCACACCTGATGGGGCAG...CCCCATAGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR TCA 90 bp | TGGGACCTACCACGTTCTACCTTCTGTTCTGTGAAGGTTCTTCAGAACTGGCCAGAGATCCCATTCTGCTaGGGCTTGTGCTCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WDLPRSTFCSVKVLQNWPEIPFC*GLCSSF Trigger: GAAGGAGGAGCACAAGCCTCAGCAGAATGGGATCTC...TGGCCAGTTCTGAAGAACCTTCACAGAACAGAAGGTAGAACGTGGTAGGTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR GCA 90 bp | TTAAAAGATACCTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCTCGCCCAGGTCCCCTaGAGCCATCTTCCCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKDTYGLSTGSSSGLLSHLAQVP*SHLPAA Trigger: GGCGGCGGGAAGATGGCTGCAGGGGACCTGGGCGAG...ATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAGGTATCTTTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CCA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCAATGTGCTAAGTGTTTaGCCAAATGAGGATCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QNWPKPARRGGRGCHLTTNVLSV*PNEDPK Trigger: TTTCGGATCCTCATTTGGCCAAACACTTAGCACATT...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | CTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTTGGGCACGCGGATCGTaGGCATATGAGGCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRSINWFIKRSFESSGMTWARGS*AYEAPA Trigger: TGCTGGTGCCTCATATGCCCACGATCCGCGTGCCCA...AGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR TCA 90 bp | TTAAAAGATACCTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCGGATCGTGGGCATATaGGGCACCAGCAGCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LKDTYGLSTGSSSGLLSHRIVGI*GTSSSP Trigger: GGGCGAGCTGCTGGTGCCTCATATGCCCACGATCCG...ATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAGGTATCTTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CCA 90 bp | TGGGACCTACCACGTTCTACCTTCTGTTCTGTGAAGGTTCTTCAGAACTGGCCATGGTTGCTGCCTCCATaGCCACAGGTAACTGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: WDLPRSTFCSVKVLQNWPWLLPP*PQVTAL Trigger: TAATGCAGTTACCTGTGGCCATGGAGGCAGCAACCA...TGGCCAGTTCTGAAGAACCTTCACAGAACAGAAGGTAGAACGTGGTAGGTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | TGGGACCTACCACGTTCTACCTTCTGTTCTGTGAAGGTTCTTCAGAACTGGCCATCTTCAAACTCGGGGTaGCTGAAGATCCAGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WDLPRSTFCSVKVLQNWPSSNSG*LKIQSS Trigger: ACTGGACTGGATCTTCAGCCACCCCGAGTTTGAAGA...TGGCCAGTTCTGAAGAACCTTCACAGAACAGAAGGTAGAACGTGGTAGGTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTCGGATCGTGGGCATATaGGGCACCAGCAGCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LEEKENLYQTGSLTGYLGRIVGI*GTSSSP Trigger: GGGCGAGCTGCTGGTGCCTCATATGCCCACGATCCG...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | TCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTATGGGGGAGATCCCATTCTGCTaGGGCTTGTGCTCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SINWFIKRSFESSGMTMGEIPFC*GLCSSF Trigger: GAAGGAGGAGCACAAGCCTCAGCAGAATGGGATCTC...CCCCATAGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTATTTCAACCAAGTGGGCACGCGGATCGTaGGCATATGAGGCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ENLYQTGSLTGYLGISTKWARGS*AYEAPA Trigger: TGCTGGTGCCTCATATGCCCACGATCCGCGTGCCCA...CTTGGTTGAAATACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | TCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTATGGGGCATCCTGCTGTCTGTTaGAGGAGAATTCCGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SINWFIKRSFESSGMTMGHPAVC*RRIPGG Trigger: GCCACCCGGAATTCTCCTCCAACAGACAGCAGGATG...CCCCATAGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CCA 90 bp | TGGGACCTACCACGTTCTACCTTCTGTTCTGTGAAGGTTCTTCAGAACTGGCCATGCAAGAAAAACTCCTaGGCATCCTGCTGTCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WDLPRSTFCSVKVLQNWPCKKNS*ASCCLL Trigger: CAACAGACAGCAGGATGCCCAGGAGTTTTTCTTGCA...TGGCCAGTTCTGAAGAACCTTCACAGAACAGAAGGTAGAACGTGGTAGGTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | CTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTGTAGGGGTCTTCTGTTaGCTTCTGCTTCCCTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRSINWFIKRSFESSGMTVGVFC*LLLPSA Trigger: TGCGGAGGGAAGCAGAAGCCAACAGAAGACCCCTAC...AGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAACACTGGGAGGAATCCTaGCCCCGTTGTCCAGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKYLCGFEWLRGILRLFQHWEES*PRCPVA Trigger: TGCAACTGGACAACGGGGTCAGGATTCCTCCCAGTG...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTCTGCCCCATCAGGTGTaGTGGTGCCCAGCTTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: LEEKENLYQTGSLTGYLGLPHQV*WCPASR Trigger: CCGTGAAGCTGGGCACCATCACACCTGATGGGGCAG...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | TGGGACCTACCACGTTCTACCTTCTGTTCTGTGAAGGTTCTTCAGAACTGGCCAAGACTCATCAATGTCTaGGGGGTCTATCAACTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WDLPRSTFCSVKVLQNWPRLINV*GVYQLV Trigger: AACCAGTTGATAGACCCCTCAGACATTGATGAGTCT...TGGCCAGTTCTGAAGAACCTTCACAGAACAGAAGGTAGAACGTGGTAGGTCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | TCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTATGGGGGAGCTCAGATTTCACTaGAGGCTTCGAGTACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SINWFIKRSFESSGMTMGELRFH*RLRVLA Trigger: GGCCAGTACTCGAAGCCTCCAGTGAAATCTGAGCTC...CCCCATAGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAAACCCATCCTTCACTCTaGGTCCCTCTGGCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKYLCGFEWLRGILRLFQTHPSL*VPLAWP Trigger: AGGCCAAGCCAGAGGGACCCAGAGTGAAGGATGGGT...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | CTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTAAGGGGACTTTGAGCTaGGCACTGCATCACAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRSINWFIKRSFESSGMTKGTLS*ALHHKQ Trigger: TTGCTTGTGATGCAGTGCTCAGCTCAAAGTCCCCTT...AGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR TCA 90 bp | TTAAAAGATACCTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCACTGGGAGGAATCCTaGCCCCGTTGTCCAGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKDTYGLSTGSSSGLLSHHWEES*PRCPVA Trigger: TGCAACTGGACAACGGGGTCAGGATTCCTCCCAGTG...ATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAGGTATCTTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTCTCCGGTGTTCCCCGTaGAGTACACAGCCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEEKENLYQTGSLTGYLGLRCSP*STQPSC Trigger: GCAGGAAGGCTGTGTACTTCACGGGGAACACCGGAG...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | TGGGACCTACCACGTTCTACCTTCTGTTCTGTGAAGGTTCTTCAGAACTGGCCAATCGTCCCTCTTTCTTaGTATGGCAAACATAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: WDLPRSTFCSVKVLQNWPIVPLS*YGKHNG Trigger: GCCATTATGTTTGCCATATCAAGAAAGAGGGACGAT...TGGCCAGTTCTGAAGAACCTTCACAGAACAGAAGGTAGAACGTGGTAGGTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | CTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTTTAGTTCCTGACTCCTaGATCACTTCCCACTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRSINWFIKRSFESSGMTLVPDS*ITSHSL Trigger: CAGCGAGTGGGAAGTGATCCAGGAGTCAGGAACTAA...AGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CCA 90 bp | CTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTCCTACATACGCTCTCTaGAACTCTGGGATGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRSINWFIKRSFESSGMTPTYAL*NSGMLK Trigger: CTTCAGCATCCCAGAGTTCCAGAGAGCGTATGTAGG...AGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAAGAGGAGAATTCCGGGTaGCTCTTGCTGACAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKYLCGFEWLRGILRLFQEENSG*LLLTKA Trigger: GGCCTTTGTCAGCAAGAGCCACCCGGAATTCTCCTC...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAAGTAGGGGTCTTCTGTTaGCTTCTGCTTCCCTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKYLCGFEWLRGILRLFQVGVFC*LLLPSA Trigger: TGCGGAGGGAAGCAGAAGCCAACAGAAGACCCCTAC...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CAA 72 bp | GCATGTATCTGGGGATCTGGGCTAGCAACAGTGGACTaGGGATTTCAAAATATTTGTGTGGGTTTGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ACIWGSGLATVD*GFQNICVGLSG Trigger: GCCACTCAAACCCACACAAATATTTTGAAATCCCAAGTCCACTGTTGCTAGCCCAGATCCCCAGATACATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | GAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTATTTCAACCAAGCCTGTAAGGGGACTTTaGGCTGAGCACTGCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: ENLYQTGSLTGYLGISTKPVRGL*AEHCIT Trigger: TGTGATGCAGTGCTCAGCTCAAAGTCCCCTTACAGG...CTTGGTTGAAATACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | TCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTATGGGGATCACTTGGGTTTTCTaGGCCAATGCGATTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SINWFIKRSFESSGMTMGITWVF*ANAIPL Trigger: GAGAGGAATCGCATTGGCTCAGAAAACCCAAGTGAT...CCCCATAGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTCAAACTCGGGGTGGCTaGAGATCCAGTCCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEEKENLYQTGSLTGYLGQTRGG*RSSPVL Trigger: GAGCACTGGACTGGATCTTCAGCCACCCCGAGTTTG...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR GCA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTCCAGTGCGTGGCCGTTaGCCCCTGAGCTGTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEEKENLYQTGSLTGYLGPVRGR*PLSCQK Trigger: TTTTTGACAGCTCAGGGGGCAACGGCCACGCACTGG...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR GCA 90 bp | TCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTATGGGGTGTGTGTTGAAGTCCTaGGTTGGATCTAACGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SINWFIKRSFESSGMTMGCVLKS*VGSNGE Trigger: CTCACCGTTAGATCCAACGCAGGACTTCAACACACA...CCCCATAGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAAGATACCTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATGAGGAGAATTCCGGGTaGCTCTTGCTGACAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKDTYGLSTGSSSGLLSHEENSG*LLLTKA Trigger: GGCCTTTGTCAGCAAGAGCCACCCGGAATTCTCCTC...ATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAGGTATCTTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CCA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATCATCCTGCTGTCTGTTaGAGGAGAATTCCGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNHPAVC*RRIPGG Trigger: GCCACCCGGAATTCTCCTCCAACAGACAGCAGGATG...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | TCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTATGGGGTGCAAGAAAAACTCCTaGGCATCCTGCTGTCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SINWFIKRSFESSGMTMGCKKNS*ASCCLL Trigger: CAACAGACAGCAGGATGCCCAGGAGTTTTTCTTGCA...CCCCATAGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CCA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATAAGGCAGGCACTGAATaGGATCTTGGCTCGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNKAGTE*DLGSHQ Trigger: CTGGTGCGAGCCAAGATCCCATTCAGTGCCTGCCTT...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTCACTCTGGGTCCCTCTaGCTTGGCCTCAGACACGAT | + |
|
Preference number: 4 (lower is better) Translates to: LEEKENLYQTGSLTGYLGHSGSL*LGLRHD Trigger: ATCGTGTCTGAGGCCAAGCCAGAGGGACCCAGAGTG...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | CTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTTCATCACCTGTTCAATaGGCTCAGATTTCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRSINWFIKRSFESSGMTSSPVQ*AQISLE Trigger: CTCCAGTGAAATCTGAGCTCATTGAACAGGTGATGA...AGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR GCA 90 bp | ACTAACGGGAGGGCCTTAGCCATACCTCTAAATTATTCACTAGCTATGCTCAGAGGTTTTCTGAGCCAATaGGATTCCTCTCTACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TNGRALAIPLNYSLAMLRGFLSQ*DSSLPD Trigger: ATCTGGTAGAGAGGAATCGCATTGGCTCAGAAAACC...TCTGAGCATAGCTAGTGAATAATTTAGAGGTATGGCTAAGGCCCTCCCGTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR GCA 90 bp | TTAAAAGATACCTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCTCATCTTTGTTGGTTaGTGCCTCCATGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKDTYGLSTGSSSGLLSHLIFVG*CLHGHR Trigger: CCTGTGGCCATGGAGGCAGCAACCAACAAAGATGAG...ATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAGGTATCTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAACCTACATACGCTCTCTaGAACTCTGGGATGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKYLCGFEWLRGILRLFQPTYAL*NSGMLK Trigger: CTTCAGCATCCCAGAGTTCCAGAGAGCGTATGTAGG...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CAA 72 bp | ATGGTATATCCCACTGGTACTCTAGAGCAGCTTAGCTaGCATATACCAGGAGACACATGCAAGCACATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: MVYPTGTLEQLS*HIPGDTCKHIL Trigger: TAGAATGTGCTTGCATGTGTCTCCTGGTATATGCAAGCTAAGCTGCTCTAGAGTACCAGTGGGATATACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | ACTAACGGGAGGGCCTTAGCCATACCTCTAAATTATTCACTAGCTATGCTCAGACATCAAGCGGTCTTTTaGGTCATCAGGAATGACTAT | + |
|
Preference number: 4 (lower is better) Translates to: TNGRALAIPLNYSLAMLRHQAVF*VIRNDY Trigger: ATAGTCATTCCTGATGACTCAAAAGACCGCTTGATG...TCTGAGCATAGCTAGTGAATAATTTAGAGGTATGGCTAAGGCCCTCCCGTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR GCA 90 bp | GAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTATTTCAACCAAGTCAGGCTCCTCCATGTaGACGATAATCCAGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ENLYQTGSLTGYLGISTKSGSSM*TIIQLK Trigger: CTTCAACTGGATTATCGTGCACATGGAGGAGCCTGA...CTTGGTTGAAATACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | TCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTATGGGGGTAGTCAAATATCCTTaGGAGGTTTCCTACATACGC | + |
|
Preference number: 4 (lower is better) Translates to: SINWFIKRSFESSGMTMGVVKYP*EVSYIR Trigger: GCGTATGTAGGAAACCTCCCAAGGATATTTGACTAC...CCCCATAGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAAGATACCTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATTGGTTGCTGCCTCCATaGCCACAGGTAACTGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: LKDTYGLSTGSSSGLLSHWLLPP*PQVTAL Trigger: TAATGCAGTTACCTGTGGCCATGGAGGCAGCAACCA...ATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAGGTATCTTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTAAGGGGACTTTGAGCTaGGCACTGCATCACAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LEEKENLYQTGSLTGYLGKGTLS*ALHHKQ Trigger: TTGCTTGTGATGCAGTGCTCAGCTCAAAGTCCCCTT...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR GCA 90 bp | TTAAAAGATACCTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATACCTTCTCTCGCATGTaGCTCTTCAGGTGCATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LKDTYGLSTGSSSGLLSHTFSRM*LFRCMY Trigger: ATACATGCACCTGAAGAGGCACATGCGAGAGAAGGT...ATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAGGTATCTTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR GCA 90 bp | TCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTATGGGGAAAAGAATAAACATCTaGCCCATCAGGTGTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SINWFIKRSFESSGMTMGKRINI*PIRCDG Trigger: ACCATCACACCTGATGGGGCAGATGTTTATTCTTTT...CCCCATAGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAAATCATCCACATTGTCTaGTTCAGCAAAGGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKYLCGFEWLRGILRLFQIIHIV*FSKGLK Trigger: CTTCAGGCCTTTGCTGAACCAGACAATGTGGATGAT...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATTCATCACCTGTTCAATaGGCTCAGATTTCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNSSPVQ*AQISLE Trigger: CTCCAGTGAAATCTGAGCTCATTGAACAGGTGATGA...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTATCACTTGGGTTTTCTaGGCCAATGCGATTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEEKENLYQTGSLTGYLGITWVF*ANAIPL Trigger: GAGAGGAATCGCATTGGCTCAGAAAACCCAAGTGAT...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR GCA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTTGTGTGTTGAAGTCCTaGGTTGGATCTAACGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LEEKENLYQTGSLTGYLGCVLKS*VGSNGE Trigger: CTCACCGTTAGATCCAACGCAGGACTTCAACACACA...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR GCA 90 bp | TTAAAAGATACCTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATGGTTTTCTGAGCCAATaGGATTCCTCTCTACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LKDTYGLSTGSSSGLLSHGFLSQ*DSSLPD Trigger: ATCTGGTAGAGAGGAATCGCATTGGCTCAGAAAACC...ATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAGGTATCTTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAACACGATGTTGGCATTTaGATTGTTCTCCATCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SKYLCGFEWLRGILRLFQHDVGI*IVLHLD Trigger: ATCGAGATGGAGAACAATGCAAATGCCAACATCGTG...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| CDS-3UTR CCA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTGTTTTCCCATGTGTCTaGATCCTGCTTCCTGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEEKENLYQTGSLTGYLGVFPCV*ILLPVR Trigger: CCTTACAGGAAGCAGGATCCAGACACATGGGAAAAC...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | ACTAACGGGAGGGCCTTAGCCATACCTCTAAATTATTCACTAGCTATGCTCAGAAAACATCAAATTTTCTaGGAACCCAGTCAAGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: TNGRALAIPLNYSLAMLRKHQIF*EPSQDQ Trigger: TTGGTCTTGACTGGGTTCCCAGAAAATTTGATGTTT...TCTGAGCATAGCTAGTGAATAATTTAGAGGTATGGCTAAGGCCCTCCCGTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAATCCTCTCTACCAGATTaGCCAAATGCAAGAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SKYLCGFEWLRGILRLFQSSLPD*PNARKT Trigger: AGTTTTTCTTGCATTTGGTCAATCTGGTAGAGAGGA...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR GCA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAAAAAAGAATAAACATCTaGCCCATCAGGTGTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKYLCGFEWLRGILRLFQKRINI*PIRCDG Trigger: ACCATCACACCTGATGGGGCAGATGTTTATTCTTTT...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| 3UTR CAA 72 bp | AAGAGGCAGCCATTATACACTTTCTTGAAATACGTCTaGGTGCCAGAAGGGTTAATTTGCTTCTTCTACCTA | + |
|
Preference number: 4 (lower is better) Translates to: KRQPLYTFLKYV*VPEGLICFFYL Trigger: TAGGTAGAAGAAGCAAATTAACCCTTCTGGCACCAAGACGTATTTCAAGAAAGTGTATAATGGCTGCCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR TCA 90 bp | TTAAAAGATACCTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATTCCTCTCTACCAGATTaGCCAAATGCAAGAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LKDTYGLSTGSSSGLLSHSSLPD*PNARKT Trigger: AGTTTTTCTTGCATTTGGTCAATCTGGTAGAGAGGA...ATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAGGTATCTTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR TCA 90 bp | GAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTATTTCAACCAAGAGTCAAGACCAAAAGTaGACTTCTTTATCTGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: ENLYQTGSLTGYLGISTKSQDQK*TSLSAL Trigger: TAGTGCAGATAAAGAAGTTCACTTTTGGTCTTGACT...CTTGGTTGAAATACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CCA 90 bp | TTAAAAGATACCTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATAATGTGCTAAGTGTTTaGCCAAATGAGGATCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKDTYGLSTGSSSGLLSHNVLSV*PNEDPK Trigger: TTTCGGATCCTCATTTGGCCAAACACTTAGCACATT...ATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAGGTATCTTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTGTAGTCAAATATCCTTaGGAGGTTTCCTACATACGC | + |
|
Preference number: 4 (lower is better) Translates to: LEEKENLYQTGSLTGYLGVVKYP*EVSYIR Trigger: GCGTATGTAGGAAACCTCCCAAGGATATTTGACTAC...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS GCA 90 bp | GCGGATCGTGGGCATATGAGGCACCAGCAGCTCGCCCAGGTCCCCTaGAGCCATCTTCCCGCCGCCGCCCGGCACGCTGAACAGGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ADRGHMRHQQLAQVP*SHLPAAARHAEQGA Trigger: GGCGCCCTGTTCAGCGTGCCGGGCGGCGGCGGGAAGATGGCTGCAGGGGACCTGGGCGAGCTGCTGGTGCCTCATATGCCCACGATCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS CCA 90 bp | ACTCGTTCTTGTAGACGCGGTCCCCCGACCTGGGCACGCGGATCGTaGGCATATGAGGCACCAGCAGCTCGCCCAGGTCCCCTGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TRSCRRGPPTWARGS*AYEAPAARPGPLQP Trigger: TGGCTGCAGGGGACCTGGGCGAGCTGCTGGTGCCTCATATGCCCACGATCCGCGTGCCCAGGTCGGGGGACCGCGTCTACAAGAACGAGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS TCA 90 bp | CAGGCCCGTGTACCCTGGGCCGTACATCGGCTTCAGCTTAGTTCCTaGCTCCTGGATCACTTCCCACTCGCTGACTCTCGGTTTGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: QARVPWAVHRLQLSS*LLDHFPLADSRFDV Trigger: GACATCAAACCGAGAGTCAGCGAGTGGGAAGTGATCCAGGAGTCAGGAACTAAGCTGAAGCCGATGTACGGCCCAGGGTACACGGGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS-3UTR CAA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCAATTCCGGGTGGCTCTaGCTGACAAAGGCCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QNWPKPARRGGRGCHLTTNSGWL*LTKALN Trigger: GTTCAAGGCCTTTGTCAGCAAGAGCCACCCGGAATT...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| CDS GCA 90 bp | TACCCAGGTATGGCCAGTGGTTCAGCAAAGTCAGGCTCCTCCATGTaGACGATAATCCAGTTGAAGGCCACCTCAGCTCCGGTGTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: YPGMASGSAKSGSSM*TIIQLKATSAPVFP Trigger: GGGGAACACCGGAGCTGAGGTGGCCTTCAACTGGATTATCGTGCACATGGAGGAGCCTGACTTTGCTGAACCACTGGCCATACCTGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
||
| CDS-3UTR CAA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCGTGATCAGCTCATCTTaGTTGGTTGCTGCCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: QNWPKPARRGGRGCHLTTVISSS*LVAASM Trigger: CATGGAGGCAGCAACCAACAAAGATGAGCTGATCAC...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS CCA 90 bp | ACCAAAGACAGAGGCCCCAGCCCCTCCATACCCAGGTATGGCCAGTaGTTCAGCAAAGTCAGGCTCCTCCATGTGCACGATAATCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TKDRGPSPSIPRYGQ*FSKVRLLHVHDNPV Trigger: AACTGGATTATCGTGCACATGGAGGAGCCTGACTTTGCTGAACCACTGGCCATACCTGGGTATGGAGGGGCTGGGGCCTCTGTCTTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
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| CDS-3UTR CAA 90 bp | TGGGACCTACCACGTTCTACCTTCTGTTCTGTGAAGGTTCTTCAGAACTGGCCATTGACCCCTGCAGACTaGGCCTGCAGAGCGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WDLPRSTFCSVKVLQNWPLTPAD*ACRALL Trigger: GAGCAGCGCTCTGCAGGCCAAGTCTGCAGGGGTCAA...TGGCCAGTTCTGAAGAACCTTCACAGAACAGAAGGTAGAACGTGGTAGGTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
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| CDS CCA 90 bp | GTGTACCCTGGGCCGTACATCGGCTTCAGCTTAGTTCCTGACTCCTaGATCACTTCCCACTCGCTGACTCTCGGTTTGATGTCATTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VYPGPYIGFSLVPDS*ITSHSLTLGLMSLS Trigger: GGACAATGACATCAAACCGAGAGTCAGCGAGTGGGAAGTGATCCAGGAGTCAGGAACTAAGCTGAAGCCGATGTACGGCCCAGGGTACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS-3UTR CAA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCTCCCAACTTAGTCATTaGTGTGTTGAAGTCCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: QNWPKPARRGGRGCHLTTSQLSH*CVEVLR Trigger: ACGCAGGACTTCAACACACAAATGACTAAGTTGGGA...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CAA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCACACGATGTTGGCATTaGCATTGTTCTCCATCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: QNWPKPARRGGRGCHLTTTRCWH*HCSPSR Trigger: TCGAGATGGAGAACAATGCAAATGCCAACATCGTGT...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS TCA 90 bp | AATCATCCACATTGTCTGGTTCAGCAAAGGCCTGAAGGCAGGCACTaGATGGGATCTTGGCTCGCACCAGCTCAGGTAGGGGTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NHPHCLVQQRPEGRH*MGSWLAPAQVGVFC Trigger: ACAGAAGACCCCTACCTGAGCTGGTGCGAGCCAAGATCCCATTCAGTGCCTGCCTTCAGGCCTTTGCTGAACCAGACAATGTGGATGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 |
||
| CDS GCA 90 bp | GGGAATGAGGCAAAGCGAGAAGTTTTGACCCCTGCAGACTTGGCCTaGAGAGCGCTGCTCCAGAAATCATCCACATTGTCTGGTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GNEAKREVLTPADLA*RALLQKSSTLSGSA Trigger: TGCTGAACCAGACAATGTGGATGATTTCTGGAGCAGCGCTCTGCAGGCCAAGTCTGCAGGGGTCAAAACTTCTCGCTTTGCCTCATTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCAGTAGTCAAATATCCTaGGGAGGTTTCCTACATACG | + |
|
Preference number: 5 (lower is better) Translates to: QNWPKPARRGGRGCHLTTSSQIS*GGFLHT Trigger: CGTATGTAGGAAACCTCCCAAGGATATTTGACTACT...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS GCA 90 bp | ACTCTCGGTTTGATGTCATTGTCCCGGAGACCGTTCTCTGTCCCTTaGGTGTGGAGCATGTCGATCCCAAAATGTGCTAAGTGTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLGLMSLSRRPFSVP*VWSMSIPKCAKCLA Trigger: GGCCAAACACTTAGCACATTTTGGGATCGACATGCTCCACACGCAAGGGACAGAGAACGGTCTCCGGGACAATGACATCAAACCGAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
||
| CDS CCA 90 bp | CTTGTGCTCCTCCTTCATCACCTGTTCAATGAGCTCAGATTTCACTaGAGGCTTCGAGTACTGGCCAGAGAGGAGGCCATGTCCCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: LVLLLHHLFNELRFH*RLRVLAREEAMSQL Trigger: AAGTTGGGACATGGCCTCCTCTCTGGCCAGTACTCGAAGCCTCCAGTGAAATCTGAGCTCATTGAACAGGTGATGAAGGAGGAGCACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
||
| CDS CCA 90 bp | TGGAATCCCATCGAGGTGATAATAGCTACGATTTCCTCAGGAGGTTaGTTGTCCAATCCAGTAGCACCAAAGACAGAGGCCCCAGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: WNPIEVIIATISSGG*LSNPVAPKTEAPAP Trigger: AGGGGCTGGGGCCTCTGTCTTTGGTGCTACTGGATTGGACAACCAACCTCCTGAGGAAATCGTAGCTATTATCACCTCGATGGGATTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
||
| CDS CCA 90 bp | ACTCGTACATTCCAGACCCATCCTTCACTCTGGGTCCCTCTGGCTTaGCCTCAGACACGATGTTGGCATTTGCATTGTTCTCCATCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: TRTFQTHPSLWVPLA*PQTRCWHLHCSPSR Trigger: TCGAGATGGAGAACAATGCAAATGCCAACATCGTGTCTGAGGCCAAGCCAGAGGGACCCAGAGTGAAGGATGGGTCTGGAATGTACGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
||
| CDS-3UTR CAA 90 bp | CAGAACTGGCCAAAGCCTGCTAGAAGGGGTGGAAGGGGGTGTCACCTGACCACCGGGAATATAACAAGTTaGGCTTCGTCTTCATATTCG | + |
|
Preference number: 5 (lower is better) Translates to: QNWPKPARRGGRGCHLTTGNITS*ASSSYS Trigger: CGAATATGAAGACGAAGCCAAACTTGTTATATTCCC...GGTGGTCAGGTGACACCCCCTTCCACCCCTTCTAGCAGGCTTTGGCCAGTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CAA 90 bp | TCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTATGGGGGGTAGGGGTCTTCTGTaGGCTTCTGCTTCCCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SINWFIKRSFESSGMTMGGRGLL*ASASLR Trigger: GCGGAGGGAAGCAGAAGCCAACAGAAGACCCCTACC...CCCCATAGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS GCA 90 bp | CCACCAGAGGCTCCTCTTACCTTCTCTCGCATGTGCCTCTTCAGGTaGATGTATACGCTCTGTCCAGTTTTTCGAAAGTGTCTTTCTACG | + |
|
Preference number: 5 (lower is better) Translates to: PPEAPLTFSRMCLFR*MYTLCPVFRKCLST Trigger: CGTAGAAAGACACTTTCGAAAAACTGGACAGAGCGTATACATGCACCTGAAGAGGCACATGCGAGAGAAGGTAAGAGGAGCCTCTGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072312.12 ENSMUST00000172481.2 |
||
| CDS GCA 90 bp | CACTCTGGGTCCCTCTGGCTTGGCCTCAGACACGATGTTGGCATTTaGATTGTTCTCCATCTCGATCACAAAGTCACTGTCCTCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HSGSLWLGLRHDVGI*IVLHLDHKVTVLFK Trigger: TTTGAAGAGGACAGTGACTTTGTGATCGAGATGGAGAACAATGCAAATGCCAACATCGTGTCTGAGGCCAAGCCAGAGGGACCCAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
||
| CDS TCA 90 bp | CCATCTCGATCACAAAGTCACTGTCCTCTTCAAACTCGGGGTGGCTaGAGATCCAGTCCAGTGCTCTTTCCAGGTTATGATTCGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSRSQSHCPLQTRGG*RSSPVLFPGYDSLL Trigger: AAGCAACGAATCATAACCTGGAAAGAGCACTGGACTGGATCTTCAGCCACCCCGAGTTTGAAGAGGACAGTGACTTTGTGATCGAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
||
| CDS GCA 90 bp | AGTGTCTTTCTACGTGTTCCCTTCCAAAGGCCAAAAAGGTATTCATaGATACGTAGAGCCCACCTTCAGAGTTCGGGGAGTCGTAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVFLRVPFQRPKRYS*IRRAHLQSSGSRRR Trigger: TCTCCTACGACTCCCCGAACTCTGAAGGTGGGCTCTACGTATGCATGAATACCTTTTTGGCCTTTGGAAGGGAACACGTAGAAAGACACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
||
| CDS CCA 90 bp | ATCACCTGTTCAATGAGCTCAGATTTCACTGGAGGCTTCGAGTACTaGCCAGAGAGGAGGCCATGTCCCAACTTAGTCATTTGTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ITCSMSSDFTGGFEY*PERRPCPNLVICVL Trigger: CAACACACAAATGACTAAGTTGGGACATGGCCTCCTCTCTGGCCAGTACTCGAAGCCTCCAGTGAAATCTGAGCTCATTGAACAGGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
||
| CDS CCA 90 bp | GTAACTGCATTAGGTAGTCCACCCTCTCCGTGTAGCGAACCTTTCTaGTCTGACAGCATTGAATTCGCTCCTCCACCAAAAACCGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VTALGSPPSPCSEPF*SDSIEFAPPPKTGK Trigger: TTTTCCGGTTTTTGGTGGAGGAGCGAATTCAATGCTGTCAGACCAGAAAGGTTCGCTACACGGAGAGGGTGGACTACCTAATGCAGTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
||
| CDS-3UTR CAA 90 bp | CTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTGCTCATCTTTGTTGGTaGCTGCCTCCATGGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LRSINWFIKRSFESSGMTAHLCW*LPPWPQ Trigger: CTGTGGCCATGGAGGCAGCAACCAACAAAGATGAGC...AGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CAA 90 bp | ACTAACGGGAGGGCCTTAGCCATACCTCTAAATTATTCACTAGCTATGCTCAGATCGCTGACTCTCGGTTaGATGTCATTGTCCCGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TNGRALAIPLNYSLAMLRSLTLG*MSLSRR Trigger: TCTCCGGGACAATGACATCAAACCGAGAGTCAGCGA...TCTGAGCATAGCTAGTGAATAATTTAGAGGTATGGCTAAGGCCCTCCCGTTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CAA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAAGCTCATCTTTGTTGGTaGCTGCCTCCATGGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SKYLCGFEWLRGILRLFQAHLCW*LPPWPQ Trigger: CTGTGGCCATGGAGGCAGCAACCAACAAAGATGAGC...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CAA 90 bp | TCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTATGGGGGTGATCAGCTCATCTTaGTTGGTTGCTGCCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SINWFIKRSFESSGMTMGVISSS*LVAASM Trigger: CATGGAGGCAGCAACCAACAAAGATGAGCTGATCAC...CCCCATAGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CAA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTGGTAGGGGTCTTCTGTaGGCTTCTGCTTCCCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LEEKENLYQTGSLTGYLGGRGLL*ASASLR Trigger: GCGGAGGGAAGCAGAAGCCAACAGAAGACCCCTACC...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CAA 90 bp | ACTAACGGGAGGGCCTTAGCCATACCTCTAAATTATTCACTAGCTATGCTCAGAGCCTCAGACACGATGTaGGCATTTGCATTGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TNGRALAIPLNYSLAMLRASDTM*AFALFS Trigger: GGAGAACAATGCAAATGCCAACATCGTGTCTGAGGC...TCTGAGCATAGCTAGTGAATAATTTAGAGGTATGGCTAAGGCCCTCCCGTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CAA 90 bp | TCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTATGGGGCTGCATCACAAGCAATaGTTACCAGGGCTGGTAACT | + |
|
Preference number: 5 (lower is better) Translates to: SINWFIKRSFESSGMTMGLHHKQ*LPGLVT Trigger: AGTTACCAGCCCTGGTAACAATTGCTTGTGATGCAG...CCCCATAGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CAA 90 bp | CTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTACCGGAAAACATCACTaGGGTTTTCTGAGCCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: LRSINWFIKRSFESSGMTTGKHH*GFLSQC Trigger: GCATTGGCTCAGAAAACCCAAGTGATGTTTTCCGGT...AGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CAA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATTGCACGATAATCCAGTaGAAGGCCACCTCAGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNCTIIQ*KATSAP Trigger: CGGAGCTGAGGTGGCCTTCAACTGGATTATCGTGCA...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CAA 90 bp | TCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTATGGGGTCCCAACTTAGTCATTaGTGTGTTGAAGTCCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SINWFIKRSFESSGMTMGSQLSH*CVEVLR Trigger: ACGCAGGACTTCAACACACAAATGACTAAGTTGGGA...CCCCATAGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAAGATACCTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATAATTCCGGGTGGCTCTaGCTGACAAAGGCCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LKDTYGLSTGSSSGLLSHNSGWL*LTKALN Trigger: GTTCAAGGCCTTTGTCAGCAAGAGCCACCCGGAATT...ATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAGGTATCTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CAA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATATCAGCTCATCTTTGTaGGTTGCTGCCTCCATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNISSSL*VAASMA Trigger: GGCCATGGAGGCAGCAACCAACAAAGATGAGCTGAT...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CAA 90 bp | TTAAAAGATACCTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATATCAGCTCATCTTTGTaGGTTGCTGCCTCCATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LKDTYGLSTGSSSGLLSHISSSL*VAASMA Trigger: GGCCATGGAGGCAGCAACCAACAAAGATGAGCTGAT...ATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAGGTATCTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CAA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATTCCTCAGGAGGTTGGTaGTCCAATCCAGTAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNSSGGW*SNPVAP Trigger: TGGTGCTACTGGATTGGACAACCAACCTCCTGAGGA...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CAA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAACTGCATCACAAGCAATaGTTACCAGGGCTGGTAACT | + |
|
Preference number: 5 (lower is better) Translates to: SKYLCGFEWLRGILRLFQLHHKQ*LPGLVT Trigger: AGTTACCAGCCCTGGTAACAATTGCTTGTGATGCAG...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CAA 90 bp | TCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTATGGGGAGTAGTCAAATATCCTaGGGAGGTTTCCTACATACG | + |
|
Preference number: 5 (lower is better) Translates to: SINWFIKRSFESSGMTMGSSQIS*GGFLHT Trigger: CGTATGTAGGAAACCTCCCAAGGATATTTGACTACT...CCCCATAGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CAA 90 bp | TCAAAATATTTGTGTGGGTTTGAGTGGCTGAGAGGCATTCTGAGACTTTTCCAAACCGGAAAACATCACTaGGGTTTTCTGAGCCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: SKYLCGFEWLRGILRLFQTGKHH*GFLSQC Trigger: GCATTGGCTCAGAAAACCCAAGTGATGTTTTCCGGT...TTGGAAAAGTCTCAGAATGCCTCTCAGCCACTCAAACCCACACAAATATTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CAA 90 bp | CTACGGTCTATCAACTGGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATGACTGGGAATATAACAAGTTaGGCTTCGTCTTCATATTCG | + |
|
Preference number: 5 (lower is better) Translates to: LRSINWFIKRSFESSGMTGNITS*ASSSYS Trigger: CGAATATGAAGACGAAGCCAAACTTGTTATATTCCC...AGTCATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172481.2 |
||
| CDS-3UTR CAA 90 bp | TTAGAAGAAAAAGAAAACCTGTACCAAACTGGATCTCTGACTGGTTATTTGGGTCAGAAATCATCCACATaGTCTGGTTCAGCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LEEKENLYQTGSLTGYLGQKSST*SGSAKA Trigger: GGCCTTTGCTGAACCAGACAATGTGGATGATTTCTG...ACCCAAATAACCAGTCAGAGATCCAGTTTGGTACAGGTTTTCTTTTTCTTCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS-3UTR CAA 90 bp | AGTAGCAAAGGGCCTTATAGACTAAAAAGTTTTGAGTTCTGGAGTCAGGGAAATATGTTGGCATTTGCATaGTTCTCCATCTCGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: SSKGPYRLKSFEFWSQGNMLAFA*FSISIT Trigger: TGTGATCGAGATGGAGAACAATGCAAATGCCAACAT...ATTTCCCTGACTCCAGAACTCAAAACTTTTTAGTCTATAAGGCCCTTTGCTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072312.12 |
||
| CDS TCA 72 bp | CGGTCCCCCGACCTGGGCACGCGGATCGTGGGCATATaGGGCACCAGCAGCTCGCCCAGGTCCCCTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSPDLGTRIVGI*GTSSSPRSPAA Trigger: GGCTGCAGGGGACCTGGGCGAGCTGCTGGTGCCTCATATGCCCACGATCCGCGTGCCCAGGTCGGGGGACCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
||
| CDS TCA 72 bp | GTACCCTGGGCCGTACATCGGCTTCAGCTTAGTTCCTaGCTCCTGGATCACTTCCCACTCGCTGACTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: VPWAVHRLQLSS*LLDHFPLADSR Trigger: CCGAGAGTCAGCGAGTGGGAAGTGATCCAGGAGTCAGGAACTAAGCTGAAGCCGATGTACGGCCCAGGGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
||
| CDS CAA 90 bp | GACTCCTGGATCACTTCCCACTCGCTGACTCTCGGTTTGATGTCATaGTCCCGGAGACCGTTCTCTGTCCCTTGCGTGTGGAGCATGTCG | + |
|
Preference number: 6 (lower is better) Translates to: DSWITSHSLTLGLMS*SRRPFSVPCVWSMS Trigger: CGACATGCTCCACACGCAAGGGACAGAGAACGGTCTCCGGGACAATGACATCAAACCGAGAGTCAGCGAGTGGGAAGTGATCCAGGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
||
| CDS TCA 72 bp | CATTGTCTGGTTCAGCAAAGGCCTGAAGGCAGGCACTaGATGGGATCTTGGCTCGCACCAGCTCAGGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: HCLVQQRPEGRH*MGSWLAPAQVG Trigger: CCCTACCTGAGCTGGTGCGAGCCAAGATCCCATTCAGTGCCTGCCTTCAGGCCTTTGCTGAACCAGACAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 |
||
| CDS CAA 72 bp | GCAAAGTCAGGCTCCTCCATGTGCACGATAATCCAGTaGAAGGCCACCTCAGCTCCGGTGTTCCCCGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AKSGSSMCTIIQ*KATSAPVFPVK Trigger: CTTCACGGGGAACACCGGAGCTGAGGTGGCCTTCAACTGGATTATCGTGCACATGGAGGAGCCTGACTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
||
| CDS CAA 90 bp | AGTGGTTCAGCAAAGTCAGGCTCCTCCATGTGCACGATAATCCAGTaGAAGGCCACCTCAGCTCCGGTGTTCCCCGTGAAGTACACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGSAKSGSSMCTIIQ*KATSAPVFPVKYTA Trigger: GGCTGTGTACTTCACGGGGAACACCGGAGCTGAGGTGGCCTTCAACTGGATTATCGTGCACATGGAGGAGCCTGACTTTGCTGAACCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
||
| CDS GCA 72 bp | CTGCAGGCTTCCAAAGGGAAGCCCATCTCAGCCAGCTaGATCACCGAAGACTCATCAATGTCTGAGGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LQASKGKPISAS*ITEDSSMSEGS Trigger: AGACCCCTCAGACATTGATGAGTCTTCGGTGATGCAGCTGGCTGAGATGGGCTTCCCTTTGGAAGCCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
||
| CDS GCA 72 bp | ATGGCCAGTGGTTCAGCAAAGTCAGGCTCCTCCATGTaGACGATAATCCAGTTGAAGGCCACCTCAGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: MASGSAKSGSSM*TIIQLKATSAP Trigger: CGGAGCTGAGGTGGCCTTCAACTGGATTATCGTGCACATGGAGGAGCCTGACTTTGCTGAACCACTGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
||
| CDS CCA 72 bp | GGGCCGTACATCGGCTTCAGCTTAGTTCCTGACTCCTaGATCACTTCCCACTCGCTGACTCTCGGTTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GPYIGFSLVPDS*ITSHSLTLGLM Trigger: CATCAAACCGAGAGTCAGCGAGTGGGAAGTGATCCAGGAGTCAGGAACTAAGCTGAAGCCGATGTACGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
||
| CDS CAA 72 bp | ATCACTTCCCACTCGCTGACTCTCGGTTTGATGTCATaGTCCCGGAGACCGTTCTCTGTCCCTTGCGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ITSHSLTLGLMS*SRRPFSVPCVW Trigger: CCACACGCAAGGGACAGAGAACGGTCTCCGGGACAATGACATCAAACCGAGAGTCAGCGAGTGGGAAGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
||
| CDS CAA 72 bp | GACTCCTGGATCACTTCCCACTCGCTGACTCTCGGTTaGATGTCATTGTCCCGGAGACCGTTCTCTGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: DSWITSHSLTLG*MSLSRRPFSVP Trigger: AGGGACAGAGAACGGTCTCCGGGACAATGACATCAAACCGAGAGTCAGCGAGTGGGAAGTGATCCAGGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
||
| CDS CAA 90 bp | TTAGTTCCTGACTCCTGGATCACTTCCCACTCGCTGACTCTCGGTTaGATGTCATTGTCCCGGAGACCGTTCTCTGTCCCTTGCGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LVPDSWITSHSLTLG*MSLSRRPFSVPCVW Trigger: CCACACGCAAGGGACAGAGAACGGTCTCCGGGACAATGACATCAAACCGAGAGTCAGCGAGTGGGAAGTGATCCAGGAGTCAGGAACTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
||
| CDS CAA 90 bp | CTGGAATCCCATCGAGGTGATAATAGCTACGATTTCCTCAGGAGGTaGGTTGTCCAATCCAGTAGCACCAAAGACAGAGGCCCCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LESHRGDNSYDFLRR*VVQSSSTKDRGPSP Trigger: GGGGCTGGGGCCTCTGTCTTTGGTGCTACTGGATTGGACAACCAACCTCCTGAGGAAATCGTAGCTATTATCACCTCGATGGGATTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
||
| CDS TCA 72 bp | GCTGAGGCTTGTGCTCCTCCTTCATCACCTGTTCAATaGGCTCAGATTTCACTGGAGGCTTCGAGTACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: AEACAPPSSPVQ*AQISLEASSTG Trigger: GCCAGTACTCGAAGCCTCCAGTGAAATCTGAGCTCATTGAACAGGTGATGAAGGAGGAGCACAAGCCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
||
| CDS GCA 72 bp | GCAAAGCGAGAAGTTTTGACCCCTGCAGACTTGGCCTaGAGAGCGCTGCTCCAGAAATCATCCACATTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AKREVLTPADLA*RALLQKSSTLS Trigger: AGACAATGTGGATGATTTCTGGAGCAGCGCTCTGCAGGCCAAGTCTGCAGGGGTCAAAACTTCTCGCTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 |
||
| CDS CCA 72 bp | CCTTGGGAGGTTTCCTACATACGCTCTCTGGAACTCTaGGATGCTGAAGATGGCCTGCATGACAGAACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PWEVSYIRSLEL*DAEDGLHDRTE Trigger: CTCAGTTCTGTCATGCAGGCCATCTTCAGCATCCCAGAGTTCCAGAGAGCGTATGTAGGAAACCTCCCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
||
| CDS CCA 72 bp | CTCCTTCATCACCTGTTCAATGAGCTCAGATTTCACTaGAGGCTTCGAGTACTGGCCAGAGAGGAGGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: LLHHLFNELRFH*RLRVLAREEAM Trigger: CATGGCCTCCTCTCTGGCCAGTACTCGAAGCCTCCAGTGAAATCTGAGCTCATTGAACAGGTGATGAAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
||
| CDS CCA 72 bp | TTCCAGACCCATCCTTCACTCTGGGTCCCTCTGGCTTaGCCTCAGACACGATGTTGGCATTTGCATTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FQTHPSLWVPLA*PQTRCWHLHCS Trigger: AGAACAATGCAAATGCCAACATCGTGTCTGAGGCCAAGCCAGAGGGACCCAGAGTGAAGGATGGGTCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
||
| CDS CCA 72 bp | GTACATTCCAGACCCATCCTTCACTCTGGGTCCCTCTaGCTTGGCCTCAGACACGATGTTGGCATTTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: VHSRPILHSGSL*LGLRHDVGICI Trigger: AATGCAAATGCCAACATCGTGTCTGAGGCCAAGCCAGAGGGACCCAGAGTGAAGGATGGGTCTGGAATGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
||
| CDS CAA 72 bp | ATTCCAGACCCATCCTTCACTCTGGGTCCCTCTGGCTaGGCCTCAGACACGATGTTGGCATTTGCATTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: IPDPSFTLGPSG*ASDTMLAFALF Trigger: GAACAATGCAAATGCCAACATCGTGTCTGAGGCCAAGCCAGAGGGACCCAGAGTGAAGGATGGGTCTGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
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| CDS CAA 90 bp | CCACTGGGAGGAATCCTGACCCCGTTGTCCAGTTGCACAAGGTTGTaGGCATACTTCGATACTGGCACTTCGTTTTCCCATGTGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PLGGILTPLSSCTRL*AYFDTGTSFSHVSG Trigger: TCCAGACACATGGGAAAACGAAGTGCCAGTATCGAAGTATGCCAACAACCTTGTGCAACTGGACAACGGGGTCAGGATTCCTCCCAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS CAA 90 bp | AATCCCATCGAGGTGATAATAGCTACGATTTCCTCAGGAGGTTGGTaGTCCAATCCAGTAGCACCAAAGACAGAGGCCCCAGCCCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: NPIEVIIATISSGGW*SNPVAPKTEAPAPP Trigger: TGGAGGGGCTGGGGCCTCTGTCTTTGGTGCTACTGGATTGGACAACCAACCTCCTGAGGAAATCGTAGCTATTATCACCTCGATGGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
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| CDS CAA 90 bp | AACTCGTACATTCCAGACCCATCCTTCACTCTGGGTCCCTCTGGCTaGGCCTCAGACACGATGTTGGCATTTGCATTGTTCTCCATCTCG | + |
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Preference number: 6 (lower is better) Translates to: NSYIPDPSFTLGPSG*ASDTMLAFALFSIS Trigger: CGAGATGGAGAACAATGCAAATGCCAACATCGTGTCTGAGGCCAAGCCAGAGGGACCCAGAGTGAAGGATGGGTCTGGAATGTACGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
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| CDS CAA 90 bp | CTGGGTCCCTCTGGCTTGGCCTCAGACACGATGTTGGCATTTGCATaGTTCTCCATCTCGATCACAAAGTCACTGTCCTCTTCAAACTCG | + |
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Preference number: 6 (lower is better) Translates to: LGPSGLASDTMLAFA*FSISITKSLSSSNS Trigger: CGAGTTTGAAGAGGACAGTGACTTTGTGATCGAGATGGAGAACAATGCAAATGCCAACATCGTGTCTGAGGCCAAGCCAGAGGGACCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
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| CDS TCA 72 bp | TGTCTGGATCCTGCTTCCTGTAAGGGGACTTTGAGCTaGGCACTGCATCACAAGCAATTGTTACCAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: CLDPASCKGTLS*ALHHKQLLPGL Trigger: CAGCCCTGGTAACAATTGCTTGTGATGCAGTGCTCAGCTCAAAGTCCCCTTACAGGAAGCAGGATCCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS GCA 72 bp | TTGATGTCATTGTCCCGGAGACCGTTCTCTGTCCCTTaGGTGTGGAGCATGTCGATCCCAAAATGTGCTAAG | + |
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Preference number: 6 (lower is better) Translates to: LMSLSRRPFSVP*VWSMSIPKCAK Trigger: CTTAGCACATTTTGGGATCGACATGCTCCACACGCAAGGGACAGAGAACGGTCTCCGGGACAATGACATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS CCA 72 bp | CTCTGGGTCCCTCTGGCTTGGCCTCAGACACGATGTTaGCATTTGCATTGTTCTCCATCTCGATCACAAAGT | + |
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Preference number: 6 (lower is better) Translates to: LWVPLAWPQTRC*HLHCSPSRSQS Trigger: ACTTTGTGATCGAGATGGAGAACAATGCAAATGCCAACATCGTGTCTGAGGCCAAGCCAGAGGGACCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
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| CDS CAA 72 bp | GGAGGAATCCTGACCCCGTTGTCCAGTTGCACAAGGTaGTTGGCATACTTCGATACTGGCACTTCGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GGILTPLSSCTR*LAYFDTGTSFS Trigger: GGAAAACGAAGTGCCAGTATCGAAGTATGCCAACAACCTTGTGCAACTGGACAACGGGGTCAGGATTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS CAA 72 bp | ACTCTGGGTCCCTCTGGCTTGGCCTCAGACACGATGTaGGCATTTGCATTGTTCTCCATCTCGATCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: TLGPSGLASDTM*AFALFSISITK Trigger: CTTTGTGATCGAGATGGAGAACAATGCAAATGCCAACATCGTGTCTGAGGCCAAGCCAGAGGGACCCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
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| CDS CAA 90 bp | GTAGTCCACCCTCTCCGTGTAGCGAACCTTTCTGGTCTGACAGCATaGAATTCGCTCCTCCACCAAAAACCGGAAAACATCACTTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: VVHPLRVANLSGLTA*NSLLHQKPENITWV Trigger: AACCCAAGTGATGTTTTCCGGTTTTTGGTGGAGGAGCGAATTCAATGCTGTCAGACCAGAAAGGTTCGCTACACGGAGAGGGTGGACTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS CAA 90 bp | TCACTCTGGGTCCCTCTGGCTTGGCCTCAGACACGATGTTGGCATTaGCATTGTTCTCCATCTCGATCACAAAGTCACTGTCCTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: SLWVPLAWPQTRCWH*HCSPSRSQSHCPLQ Trigger: TTGAAGAGGACAGTGACTTTGTGATCGAGATGGAGAACAATGCAAATGCCAACATCGTGTCTGAGGCCAAGCCAGAGGGACCCAGAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
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| CDS TCA 72 bp | CCATGTGTCTGGATCCTGCTTCCTGTAAGGGGACTTTaGGCTGAGCACTGCATCACAAGCAATTGTTACCAG | + |
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Preference number: 6 (lower is better) Translates to: PCVWILLPVRGL*AEHCITSNCYQ Trigger: CTGGTAACAATTGCTTGTGATGCAGTGCTCAGCTCAAAGTCCCCTTACAGGAAGCAGGATCCAGACACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS TCA 72 bp | CTCAGCCAGCTGCATCACCGAAGACTCATCAATGTCTaGGGGGTCTATCAACTGGTTCATCAAGCGGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LSQLHHRRLINV*GVYQLVHQAVF Trigger: AAAGACCGCTTGATGAACCAGTTGATAGACCCCTCAGACATTGATGAGTCTTCGGTGATGCAGCTGGCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 |
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| CDS GCA 72 bp | CTACGTGTTCCCTTCCAAAGGCCAAAAAGGTATTCATaGATACGTAGAGCCCACCTTCAGAGTTCGGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LRVPFQRPKRYS*IRRAHLQSSGS Trigger: ACTCCCCGAACTCTGAAGGTGGGCTCTACGTATGCATGAATACCTTTTTGGCCTTTGGAAGGGAACACGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS GCA 72 bp | TCCCTCTGGCTTGGCCTCAGACACGATGTTGGCATTTaGATTGTTCTCCATCTCGATCACAAAGTCACTGTC | + |
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Preference number: 6 (lower is better) Translates to: SLWLGLRHDVGI*IVLHLDHKVTV Trigger: GACAGTGACTTTGTGATCGAGATGGAGAACAATGCAAATGCCAACATCGTGTCTGAGGCCAAGCCAGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
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| CDS GCA 72 bp | GAGGCTCCTCTTACCTCTCGCATGTGCCTCTTCAGGTaGATGTATACGCTCTGTCCAGTTTTTCGAAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: EAPLTSRMCLFR*MYTLCPVFRKC Trigger: ACACTTTCGAAAAACTGGACAGAGCGTATACATGCACCTGAAGAGGCACATGCGAGAGGTAAGAGGAGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108228.8 |
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| CDS CCA 72 bp | TCAATGAGCTCAGATTTCACTGGAGGCTTCGAGTACTaGCCAGAGAGGAGGCCATGTCCCAACTTAGTCATT | + |
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Preference number: 6 (lower is better) Translates to: SMSSDFTGGFEY*PERRPCPNLVI Trigger: AATGACTAAGTTGGGACATGGCCTCCTCTCTGGCCAGTACTCGAAGCCTCCAGTGAAATCTGAGCTCATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS CAA 72 bp | GGAATCCTGACCCCGTTGTCCAGTTGCACAAGGTTGTaGGCATACTTCGATACTGGCACTTCGTTTTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: GILTPLSSCTRL*AYFDTGTSFSH Trigger: ATGGGAAAACGAAGTGCCAGTATCGAAGTATGCCAACAACCTTGTGCAACTGGACAACGGGGTCAGGATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS CAA 72 bp | CCTCTCCGTGTAGCGAACCTTTCTGGTCTGACAGCATaGAATTCGCTCCTCCACCAAAAACCGGAAAACATC | + |
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Preference number: 6 (lower is better) Translates to: PLRVANLSGLTA*NSLLHQKPENI Trigger: GATGTTTTCCGGTTTTTGGTGGAGGAGCGAATTCAATGCTGTCAGACCAGAAAGGTTCGCTACACGGAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS CAA 72 bp | GAGGTGATAATAGCTACGATTTCCTCAGGAGGTTGGTaGTCCAATCCAGTAGCACCAAAGACAGAGGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: EVIIATISSGGW*SNPVAPKTEAP Trigger: TGGGGCCTCTGTCTTTGGTGCTACTGGATTGGACAACCAACCTCCTGAGGAAATCGTAGCTATTATCACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
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| CDS TCA 72 bp | TCACAAAGTCACTGTCCTCTTCAAACTCGGGGTGGCTaGAGATCCAGTCCAGTGCTCTTTCCAGGTTATGAT | + |
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Preference number: 6 (lower is better) Translates to: SQSHCPLQTRGG*RSSPVLFPGYD Trigger: ATCATAACCTGGAAAGAGCACTGGACTGGATCTTCAGCCACCCCGAGTTTGAAGAGGACAGTGACTTTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
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| CDS GCA 72 bp | GCTCCTCTTACCTTCTCTCGCATGTGCCTCTTCAGGTaGATGTATACGCTCTGTCCAGTTTTTCGAAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: APLTFSRMCLFR*MYTLCPVFRKC Trigger: ACACTTTCGAAAAACTGGACAGAGCGTATACATGCACCTGAAGAGGCACATGCGAGAGAAGGTAAGAGGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072312.12 ENSMUST00000172481.2 |
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| CDS CCA 72 bp | TGTGGAGCATGTCGATCCCAAAATGTGCTAAGTGTTTaGCCAAATGAGGATCCGAAACAGGCCCCTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: CGACRSQNVLSV*PNEDPKQAPLL Trigger: AAGAAGAGGGGCCTGTTTCGGATCCTCATTTGGCCAAACACTTAGCACATTTTGGGATCGACATGCTCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS CCA 72 bp | ATCGAGGTGATAATAGCTACGATTTCCTCAGGAGGTTaGTTGTCCAATCCAGTAGCACCAAAGACAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: IEVIIATISSGG*LSNPVAPKTEA Trigger: GGCCTCTGTCTTTGGTGCTACTGGATTGGACAACCAACCTCCTGAGGAAATCGTAGCTATTATCACCTCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
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| CDS CAA 72 bp | CCTGCGTTGGATCTAACGGTGAGTAGTCAAATATCCTaGGGAGGTTTCCTACATACGCTCTCTGGAACTCTG | + |
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Preference number: 6 (lower is better) Translates to: PALDLTVSSQIS*GGFLHTLSGTL Trigger: CAGAGTTCCAGAGAGCGTATGTAGGAAACCTCCCAAGGATATTTGACTACTCACCGTTAGATCCAACGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000172481.2 |
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| CDS CAA 72 bp | CATCGAGGTGATAATAGCTACGATTTCCTCAGGAGGTaGGTTGTCCAATCCAGTAGCACCAAAGACAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: HRGDNSYDFLRR*VVQSSSTKDRG Trigger: GCCTCTGTCTTTGGTGCTACTGGATTGGACAACCAACCTCCTGAGGAAATCGTAGCTATTATCACCTCGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
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| CDS CAA 72 bp | TCTGGCTTGGCCTCAGACACGATGTTGGCATTTGCATaGTTCTCCATCTCGATCACAAAGTCACTGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SGLASDTMLAFA*FSISITKSLSS Trigger: AGAGGACAGTGACTTTGTGATCGAGATGGAGAACAATGCAAATGCCAACATCGTGTCTGAGGCCAAGCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 ENSMUST00000156769.2 |
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| CDS CCA 72 bp | ACCGAAGACTCATCAATGTCTGAGGGGTCTATCAACTaGTTCATCAAGCGGTCTTTTGAGTCATCAGGAATG | + |
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Preference number: 6 (lower is better) Translates to: TEDSSMSEGSIN*FIKRSFESSGM Trigger: CATTCCTGATGACTCAAAAGACCGCTTGATGAACCAGTTGATAGACCCCTCAGACATTGATGAGTCTTCGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 |
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| CDS TCA 72 bp | GAACTTCTTTATCTGCACTACCAAGTATTCAGGGAATaGGGCAAAGCGAGAAGTTTTGACCCCTGCAGACTT | + |
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Preference number: 6 (lower is better) Translates to: ELLYLHYQVFRE*GKARSFDPCRL Trigger: AAGTCTGCAGGGGTCAAAACTTCTCGCTTTGCCTCATTCCCTGAATACTTGGTAGTGCAGATAAAGAAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 |
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| CDS TCA 72 bp | CATCAAATTTTCTGGGAACCCAGTCAAGACCAAAAGTaGACTTCTTTATCTGCACTACCAAGTATTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: HQIFWEPSQDQK*TSLSALPSIQG Trigger: TCCCTGAATACTTGGTAGTGCAGATAAAGAAGTTCACTTTTGGTCTTGACTGGGTTCCCAGAAAATTTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072312.12 ENSMUST00000108228.8 |
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