Pregenerated sensors for USP11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031066Ensembl transcript IDs: ENSMUST00000033383.3
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACAGGCAGGGGCACACTGCCAGGGGCATAGGGCCTCTTCTTTCTaGGAGAGTAATACAGCGGTACAAGAGAACAGTAGCCACAGACTA | + |
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Preference number: 1 (lower is better) Translates to: TQAGAHCQGHRASSF*ESNTAVQENSSHRL Trigger: TAGTCTGTGGCTACTGTTCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGCAGTGTGCCCCTGCCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| 3UTR TCA 90 bp | GACTGGTACATAGTAAGTACATATGAAGAAACAAAGCCACACTGTTaGACATGGGAATCTGGAGCTTTTTATGGATACTTAACACAGAGA | + |
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Preference number: 1 (lower is better) Translates to: DWYIVSTYEETKPHC*TWESGAFYGYLTQR Trigger: TCTCTGTGTTAAGTATCCATAAAAAGCTCCAGATTCCCATGTTCAACAGTGTGGCTTTGTTTCTTCATATGTACTTACTATGTACCAGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| 3UTR-3UTR GCA 90 bp | CACAGTGAGTTCCAGGACACCCAAGAGCTACACAGACAGATCCTGTCTCAAAAACAGGCAGGGGCACACTaGCAGGGGCATAGGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: HSEFQDTQELHRQILSQKQAGAH*QGHRAS Trigger: AGAGGCCCTATGCCCCTGGCAGTGTGCCCCTGCCTG...TTTTTGAGACAGGATCTGTCTGTGTAGCTCTTGGGTGTCCTGGAACTCACTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| 3UTR-3UTR GCA 90 bp | CACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCCACACAAGGAGAGGAAGTCACTaGTGTACGGGCACACACAGG | + |
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Preference number: 2 (lower is better) Translates to: HLGGRGTISELKASLIHTRRGSH*CTGTHR Trigger: CCTGTGTGTGCCCGTACAGCAGTGACTTCCTCTCCT...TGTGTGGATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| 3UTR-3UTR TCA 90 bp | TGCCAGCACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCAGGGCCTCTTCTTTCTaGGAGAGTAATACAGCGGTA | + |
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Preference number: 2 (lower is better) Translates to: CQHLGGRGTISELKASLIRASSF*ESNTAV Trigger: TACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCT...GATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTGCTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| 3UTR-3UTR CCA 90 bp | CAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACCGTAGACAGGAGAGAGTaGCAAAGGGGGCTTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: QILSQKQQTHSGQHQLHTVDRRE*QRGLPS Trigger: AGAAGGAAGCCCCCTTTGCCACTCTCTCCTGTCTAC...GGTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| 3UTR-3UTR CCA 90 bp | CACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCCACACACCACTAAGAACACTTTaGCATGAGGAAAAGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: HLGGRGTISELKASLIHTPLRTL*HEEKRE Trigger: CTCCCTCTTTTCCTCATGCCAAAGTGTTCTTAGTGG...TGTGTGGATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGCACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCATCTGGAGCTTTTTATaGATACTTAACACAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: CQHLGGRGTISELKASLIIWSFL*ILNTEK Trigger: CTTCTCTGTGTTAAGTATCCATAAAAAGCTCCAGAT...GATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTGCTGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGCACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCTTGAACATGGGAATCTaGAGCTTTTTATGGATACTT | + |
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Preference number: 2 (lower is better) Translates to: CQHLGGRGTISELKASLILNMGI*SFLWIL Trigger: AAGTATCCATAAAAAGCTCCAGATTCCCATGTTCAA...GATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTGCTGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| 3UTR CAA 90 bp | AAAAACAACAAACCCACTCAGGACAGCATCAACTACATACCATACTaGACCTTCAGTAAGTCAACTGAACAAAGACATATGACTGGTACA | + |
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Preference number: 2 (lower is better) Translates to: KNNKPTQDSINYIPY*TFSKSTEQRHMTGT Trigger: TGTACCAGTCATATGTCTTTGTTCAGTTGACTTACTGAAGGTCAAGTATGGTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| 3UTR TCA 72 bp | TTAATGCCAGCACTTAGGAGGCAGAGGTACAATCTCTaGGTTAAAGGCCAGCCTGATCCACACAGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: LMPALRRQRYNL*VKGQPDPHSEF Trigger: GAACTCACTGTGTGGATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTGCTGGCATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| 3UTR CCA 72 bp | GCCACACTGTTGAACATGGGAATCTGGAGCTTTTTATaGATACTTAACACAGAGAAGAAGGTATGGTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: ATLLNMGIWSFL*ILNTEKKVWSQ Trigger: TTGAGACCATACCTTCTTCTCTGTGTTAAGTATCCATAAAAAGCTCCAGATTCCCATGTTCAACAGTGTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR TCA 90 bp | GCCAGGGGCATAGGGCCTCTTCTTTCTGAGAGAGTAATACAGCGGTACAAGAGACCGGTCCCGGGGCACTaGCACCAGGAGAGGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: ARGIGPLLSERVIQRYKRPVPGH*HQERVP Trigger: GGGCACCCTCTCCTGGTGTCAGTGCCCCGGGACCGG...TCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | AAGAGAGGGGGTAGACAGGAGAGAGTGGCAAAGGGGGCTTCCTTCTCCATGGTATCAGCTGTGGCACATTaGTCAGGCACTGTAGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: KRGGRQERVAKGASFSMVSAVAH*SGTVGP Trigger: CGGCCCTACAGTGCCTGAGCAATGTGCCACAGCTGA...TACCATGGAGAAGGAAGCCCCCTTTGCCACTCTCTCCTGTCTACCCCCTCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | GCCAGGGGCATAGGGCCTCTTCTTTCTGAGAGAGTAATACAGCGGTACAAGAGACCACAGATGCCCGGTTaGCCCTGGAAGTCCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: ARGIGPLLSERVIQRYKRPQMPG*PWKSSS Trigger: GGATGAGGACTTCCAGGGGCAACCGGGCATCTGTGG...TCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR TCA 90 bp | GCCAGGGGCATAGGGCCTCTTCTTTCTGAGAGAGTAATACAGCGGTACAAGAGACAGGCAGTGGGACACTaGGGTAGCAGAAGGGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: ARGIGPLLSERVIQRYKRQAVGH*GSRRGQ Trigger: TTGACCCCTTCTGCTACCTCAGTGTCCCACTGCCTG...TCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR TCA 90 bp | GCCAGGGGCATAGGGCCTCTTCTTTCTGAGAGAGTAATACAGCGGTACAAGAGAGGCAGGAGTGTCAGATaGAGAAGTCTGGGACTGGCG | + |
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Preference number: 4 (lower is better) Translates to: ARGIGPLLSERVIQRYKRGRSVR*RSLGLA Trigger: CGCCAGTCCCAGACTTCTTCATCTGACACTCCTGCC...TCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | AAGAGAGGGGGTAGACAGGAGAGAGTGGCAAAGGGGGCTTCCTTCTCCATGGTAGGCTCTACCAGAAACTaGTCCCGAGCTGTTTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: KRGGRQERVAKGASFSMVGSTRN*SRAVCK Trigger: CTTGCAAACAGCTCGGGAGCAGTTTCTGGTAGAGCC...TACCATGGAGAAGGAAGCCCCCTTTGCCACTCTCTCCTGTCTACCCCCTCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | AAGAGAGGGGGTAGACAGGAGAGAGTGGCAAAGGGGGCTTCCTTCTCCATGGTACCGGTATGTTGTTCATaGCACACAGCTGAGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: KRGGRQERVAKGASFSMVPVCCS*HTAEHW Trigger: CCAGTGCTCAGCTGTGTGGCATGAACAACATACCGG...TACCATGGAGAAGGAAGCCCCCTTTGCCACTCTCTCCTGTCTACCCCCTCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | CACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCCACACAGTGGCCAGCTGGTGCTaGTTGCAGGAGGAGCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: HLGGRGTISELKASLIHTVASWC*LQEEQY Trigger: GTACTGCTCCTCCTGCAAGCAGCACCAGCTGGCCAC...TGTGTGGATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR CCA 90 bp | GCTACACAGACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCACTTTCGTCGTCGCCTTaGGGGCCACTGCGATGCGCG | + |
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Preference number: 4 (lower is better) Translates to: ATQTDPVSKTTNPLRTASLSSSP*GPLRCA Trigger: CGCGCATCGCAGTGGCCCCCAAGGCGACGACGAAAG...TGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR CCA 90 bp | GCCAGGGGCATAGGGCCTCTTCTTTCTGAGAGAGTAATACAGCGGTACAAGAGATTCTTGGTGGCCAGCTaGTGCTGCTTGCAGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: ARGIGPLLSERVIQRYKRFLVAS*CCLQEE Trigger: CTCCTCCTGCAAGCAGCACCAGCTGGCCACCAAGAA...TCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR CCA 90 bp | GCCAGGGGCATAGGGCCTCTTCTTTCTGAGAGAGTAATACAGCGGTACAAGAGAGGTCCAGTTTCTTGGTaGCCAGCTGGTGCTGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: ARGIGPLLSERVIQRYKRGPVSW*PAGAAC Trigger: GCAAGCAGCACCAGCTGGCCACCAAGAAACTGGACC...TCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | GCCAGGGGCATAGGGCCTCTTCTTTCTGAGAGAGTAATACAGCGGTACAAGAGAAGTCTCTGGATGGGGTaGGCTCCCGCAAGTAAACAG | + |
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Preference number: 4 (lower is better) Translates to: ARGIGPLLSERVIQRYKRSLWMG*APASKQ Trigger: CTGTTTACTTGCGGGAGCGCACCCCATCCAGAGACT...TCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | GAGTTCCAGGACACCCAAGAGCTACACAGACAGATCCTGTCTCAAAAACAACAAGTCCCAGCCTGCTCCTaGTCTGCTTCTCGGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: EFQDTQELHRQILSQKQQVPACS*SASRVP Trigger: TGGGACCCGAGAAGCAGAGCAGGAGCAGGCTGGGAC...TTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGCTCTTGGGTGTCCTGGAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | TGCCAGCACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCTCCCGGATAGGAAACTaGACCAGGGTGTCCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: CQHLGGRGTISELKASLISRIGN*TRVSSF Trigger: GAAGCTGGACACCCTGGTGCAGTTTCCTATCCGGGA...GATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTGCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR CCA 90 bp | GCCAGGGGCATAGGGCCTCTTCTTTCTGAGAGAGTAATACAGCGGTACAAGAGAGGAGCAGACAGGCAGTaGGACACTGAGGTAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: ARGIGPLLSERVIQRYKRGADRQ*DTEVAE Trigger: TTCTGCTACCTCAGTGTCCCACTGCCTGTCTGCTCC...TCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR TCA 90 bp | GCCAGGGGCATAGGGCCTCTTCTTTCTGAGAGAGTAATACAGCGGTACAAGAGAAAGGTGCTAGCATCTTaGTCCCCTCCCTTCACGTAC | + |
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Preference number: 4 (lower is better) Translates to: ARGIGPLLSERVIQRYKRKVLAS*SPPFTY Trigger: GTACGTGAAGGGAGGGGATCAAGATGCTAGCACCTT...TCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR TCA 90 bp | AAGAGAGGGGGTAGACAGGAGAGAGTGGCAAAGGGGGCTTCCTTCTCCATGGTAGGCCAACCTTGTTCTTaGACACATTTGGCACAATGG | + |
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Preference number: 4 (lower is better) Translates to: KRGGRQERVAKGASFSMVGQPCS*THLAQW Trigger: CCATTGTGCCAAATGTGTTCAAGAACAAGGTTGGCC...TACCATGGAGAAGGAAGCCCCCTTTGCCACTCTCTCCTGTCTACCCCCTCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | CAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACCGGTGCTGTTCTGGCTTaGGGCGGGGATCCATGGGGA | + |
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Preference number: 4 (lower is better) Translates to: QILSQKQQTHSGQHQLHTGAVLA*GGDPWG Trigger: TCCCCATGGATCCCCGCCGCAAGCCAGAACAGCACC...GGTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | GCCAGGGGCATAGGGCCTCTTCTTTCTGAGAGAGTAATACAGCGGTACAAGAGATGCAGAGTAAACAGCTaGTTTCGTCGTCGCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: ARGIGPLLSERVIQRYKRCRVNS*FRRRLG Trigger: CCCAAGGCGACGACGAAAGCAGCTGTTTACTCTGCA...TCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR CCA 90 bp | GCCAGGGGCATAGGGCCTCTTCTTTCTGAGAGAGTAATACAGCGGTACAAGAGAGTTCCAAGCAGGCGCTaGGAGCAGCACATAATCATC | + |
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Preference number: 4 (lower is better) Translates to: ARGIGPLLSERVIQRYKRVPSRR*EQHIII Trigger: GATGATTATGTGCTGCTCCCAGCGCCTGCTTGGAAC...TCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR CCA 90 bp | CACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCCACACATGCGGCGGGGATCCATaGGGACAAAGAAGACTTCCA | + |
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Preference number: 4 (lower is better) Translates to: HLGGRGTISELKASLIHTCGGDP*GQRRLP Trigger: TGGAAGTCTTCTTTGTCCCCATGGATCCCCGCCGCA...TGTGTGGATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR TCA 90 bp | CACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCCACACAGTAGGGCCGAGTTCATaGAGCATGTGTTGCCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: HLGGRGTISELKASLIHTVGPSS*SMCCPD Trigger: ATCTGGGCAACACATGCTTCATGAACTCGGCCCTAC...TGTGTGGATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | ACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACGAGCTGGTCCCAGCCTaGTCCTGCTCTGCTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: TDPVSKTTNPLRTASTTYELVPA*SCSASR Trigger: CCGAGAAGCAGAGCAGGAGCAGGCTGGGACCAGCTC...GTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | AAGAGAGGGGGTAGACAGGAGAGAGTGGCAAAGGGGGCTTCCTTCTCCATGGTAATGTATGGCTGGGTTTaGATTTCTTCAGGGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: KRGGRQERVAKGASFSMVMYGWV*ISSGEV Trigger: CACTTCCCCTGAAGAAATGCAAACCCAGCCATACAT...TACCATGGAGAAGGAAGCCCCCTTTGCCACTCTCTCCTGTCTACCCCCTCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | CAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACCCCAGCTGGTGCTGCTTaGAGGAGGAGCAGTACCAGG | + |
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Preference number: 4 (lower is better) Translates to: QILSQKQQTHSGQHQLHTPAGAA*RRSSTR Trigger: CCTGGTACTGCTCCTCCTGCAAGCAGCACCAGCTGG...GGTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR CCA 90 bp | CACAGTGAGTTCCAGGACACCCAAGAGCTACACAGACAGATCCTGTCTCAAAAAAGCCCTCTGAGTTCTTaGTCCAGAGGCGCGTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: HSEFQDTQELHRQILSQKSPLSS*SRGACL Trigger: AAGACACGCGCCTCTGGACCAAGAACTCAGAGGGCT...TTTTTGAGACAGGATCTGTCTGTGTAGCTCTTGGGTGTCCTGGAACTCACTGTG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR CCA 90 bp | CACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCCACACACACACAGCTGAGCACTaGGCCAAGTGCCATCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: HLGGRGTISELKASLIHTHTAEH*AKCHLC Trigger: ACAAAGATGGCACTTGGCCCAGTGCTCAGCTGTGTG...TGTGTGGATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR CCA 90 bp | CACAGTGAGTTCCAGGACACCCAAGAGCTACACAGACAGATCCTGTCTCAAAAAAGTTGTTGTAGTCTCTaGATGGGGTGCGCTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: HSEFQDTQELHRQILSQKSCCSL*MGCAPA Trigger: TGCGGGAGCGCACCCCATCCAGAGACTACAACAACT...TTTTTGAGACAGGATCTGTCTGTGTAGCTCTTGGGTGTCCTGGAACTCACTGTG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR CCA 90 bp | CACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCCACACAAAGTGGTCCGGTCACTaGTTCCATTGGAGTTCACCG | + |
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Preference number: 4 (lower is better) Translates to: HLGGRGTISELKASLIHTKWSGH*FHWSSP Trigger: CGGTGAACTCCAATGGAACCAGTGACCGGACCACTT...TGTGTGGATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR TCA 90 bp | CAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACCTTCATGCCACACAGCTaGGCACTGGGCCAAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: QILSQKQQTHSGQHQLHTFMPHS*ALGQVP Trigger: TGGCACTTGGCCCAGTGCTCAGCTGTGTGGCATGAA...GGTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR TCA 90 bp | ACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACATGGGCATCTCTCAGTaGCCCCAGAGCTGGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TDPVSKTTNPLRTASTTYMGISQ*PQSWSQ Trigger: CTGGGACCAGCTCTGGGGTCACTGAGAGATGCCCAT...GTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | TGCCAGCACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCGCCGCCCAGCACCATTaGATAGCTCAACATATTCTT | + |
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Preference number: 4 (lower is better) Translates to: CQHLGGRGTISELKASLIAAQHH*IAQHIL Trigger: AAGAATATGTTGAGCTATGCAATGGTGCTGGGCGGC...GATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTGCTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | AAGAGAGGGGGTAGACAGGAGAGAGTGGCAAAGGGGGCTTCCTTCTCCATGGTAACAGATCTGAGATATTaGCCTTCTTGGGGACTACAA | + |
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Preference number: 4 (lower is better) Translates to: KRGGRQERVAKGASFSMVTDLRY*PSWGLQ Trigger: TTGTAGTCCCCAAGAAGGGCAATATCTCAGATCTGT...TACCATGGAGAAGGAAGCCCCCTTTGCCACTCTCTCCTGTCTACCCCCTCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR GCA 90 bp | GCCAGGGGCATAGGGCCTCTTCTTTCTGAGAGAGTAATACAGCGGTACAAGAGATTTCCTCCTCACTGCTaGTGTCATCTTCCACATCCT | + |
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Preference number: 4 (lower is better) Translates to: ARGIGPLLSERVIQRYKRFPPHC*CHLPHP Trigger: AGGATGTGGAAGATGACAGCAGCAGTGAGGAGGAAA...TCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR CCA 90 bp | AAGAGAGGGGGTAGACAGGAGAGAGTGGCAAAGGGGGCTTCCTTCTCCATGGTAAACTGGGATGCAAAATaGCCAACCTTGTTCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KRGGRQERVAKGASFSMVNWDAK*PTLFLN Trigger: GTTCAAGAACAAGGTTGGCCATTTTGCATCCCAGTT...TACCATGGAGAAGGAAGCCCCCTTTGCCACTCTCTCCTGTCTACCCCCTCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CCA 90 bp | GAGTTCCAGGACACCCAAGAGCTACACAGACAGATCCTGTCTCAAAAACAACAAGTTGTAGTCTCTGGATaGGGTGCGCTCCCGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EFQDTQELHRQILSQKQQVVVSG*GALPQV Trigger: TACTTGCGGGAGCGCACCCCATCCAGAGACTACAAC...TTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGCTCTTGGGTGTCCTGGAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CCA 90 bp | GCTACACAGACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAAGAGGTCCAGTTTCTTaGTGGCCAGCTGGTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATQTDPVSKTTNPLRTASRGPVS*WPAGAA Trigger: AGCAGCACCAGCTGGCCACCAAGAAACTGGACCTCT...TGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR TCA 90 bp | CAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACCGAGGGTTCCGGAAGTTaGGCTCCTCTAGGTAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: QILSQKQQTHSGQHQLHTEGSGS*APLGSD Trigger: ATCGCTACCTAGAGGAGCTCAACTTCCGGAACCCTC...GGTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CCA 90 bp | GACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACTTCCAAGACCCTCCTaGAGCAGACAGGCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DRSCLKNNKPTQDSINYILPRPS*SRQAVG Trigger: TCCCACTGCCTGTCTGCTCCAGGAGGGTCTTGGAAG...TATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CCA 90 bp | GAGTTCCAGGACACCCAAGAGCTACACAGACAGATCCTGTCTCAAAAACAACAAGGTCACTGGTTCCATTaGAGTTCACCGTCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EFQDTQELHRQILSQKQQGHWFH*SSPSAE Trigger: CTCTGCAGACGGTGAACTCCAATGGAACCAGTGACC...TTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGCTCTTGGGTGTCCTGGAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CCA 90 bp | TGCCAGCACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCAGACATAGGCTGCCTTaGACTCAATCTGATTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CQHLGGRGTISELKASLIRHRLP*TQSDSH Trigger: ATGAGAATCAGATTGAGTCCAAGGCAGCCTATGTCT...GATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTGCTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR GCA 90 bp | GCTACACAGACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCATGCTCCCGAGCTGTTTaGAAGACTAGTTCCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ATQTDPVSKTTNPLRTASCSRAV*KTSSTE Trigger: TTCTGTGGAACTAGTCTTGCAAACAGCTCGGGAGCA...TGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR GCA 90 bp | CAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACCGAGCACTGGGCCAAGTaGCATCTTTGTTTCGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QILSQKQQTHSGQHQLHTEHWAK*HLCFES Trigger: AGACTCGAAACAAAGATGGCACTTGGCCCAGTGCTC...GGTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CCA 90 bp | CAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACCTTTCTTCAGGGGAAGTaGTCCGGTCACTGGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QILSQKQQTHSGQHQLHTFLQGK*SGHWFH Trigger: ATGGAACCAGTGACCGGACCACTTCCCCTGAAGAAA...GGTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CCA 90 bp | GAGTTCCAGGACACCCAAGAGCTACACAGACAGATCCTGTCTCAAAAACAACAACTGGTTCCCAATCCATaGCAATGTATGGCTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EFQDTQELHRQILSQKQQLVPNP*QCMAGF Trigger: AAACCCAGCCATACATTGCCATGGATTGGGAACCAG...TTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGCTCTTGGGTGTCCTGGAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR TCA 90 bp | ACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACCTAGCAGTCTCTCCCTaGGATGCCAGCTTATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TDPVSKTTNPLRTASTTYLAVSP*DASLSD Trigger: ATCAGATAAGCTGGCATCTCAGGGAGAGACTGCTAG...GTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR TCA 90 bp | CACAGTGAGTTCCAGGACACCCAAGAGCTACACAGACAGATCCTGTCTCAAAAAGGTTGGAAACTGCGATaGGATCATATTTGTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSEFQDTQELHRQILSQKGWKLR*DHICRG Trigger: ACCTCTACAAATATGATCTCATCGCAGTTTCCAACC...TTTTTGAGACAGGATCTGTCTGTGTAGCTCTTGGGTGTCCTGGAACTCACTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR GCA 90 bp | GCTACACAGACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAGGCCACTGTCCTTGTTaGAGGCAAATGTTGTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: ATQTDPVSKTTNPLRTASGHCPC*RQMLYS Trigger: ACTATACAACATTTGCCTGCAACAAGGACAGTGGCC...TGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CCA 90 bp | GCTACACAGACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACGCCTCTTCATATCTaGTTCCCAATCCATGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ATQTDPVSKTTNPLRTASTPLHI*FPIHGN Trigger: ATTGCCATGGATTGGGAACCAGATATGAAGAGGCGT...TGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CCA 90 bp | GAGTTCCAGGACACCCAAGAGCTACACAGACAGATCCTGTCTCAAAAACAACAACTCCTTCAGCTGCACTaGACTTTTCTTCAGCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: EFQDTQELHRQILSQKQQLLQLH*TFLQHV Trigger: TACATGCTGAAGAAAAGTCCAGTGCAGCTGAAGGAG...TTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGCTCTTGGGTGTCCTGGAACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR GCA 90 bp | GACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATAATGCACTCCTTCAGCTaGACTGGACTTTTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DRSCLKNNKPTQDSINYIMHSFS*TGLFFS Trigger: GCTGAAGAAAAGTCCAGTGCAGCTGAAGGAGTGCAT...TATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CCA 90 bp | ACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACCATCCTCATCTGAGGTaGGTTTGGTCACATATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TDPVSKTTNPLRTASTTYHPHLR*VWSHIV Trigger: CACGATATGTGACCAAACCCACCTCAGATGAGGATG...GTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CCA 90 bp | GCCAGGGGCATAGGGCCTCTTCTTTCTGAGAGAGTAATACAGCGGTACAAGAGAAGAAGACTCATTCTTTaGTTTGATGACAAACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARGIGPLLSERVIQRYKRRRLIL*FDDKLR Trigger: TCTGAGTTTGTCATCAAACCAAAGAATGAGTCTTCT...TCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CCA 90 bp | CACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCCACACAATATTTGTAGAGGTCTaGAGAAGACTCATTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLGGRGTISELKASLIHTIFVEV*RRLILW Trigger: CCAAAGAATGAGTCTTCTCCAGACCTCTACAAATAT...TGTGTGGATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR GCA 90 bp | GACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACTTCCACCTTCCGAATaGCAGGAAGTTCTATTACCT | + |
|
Preference number: 4 (lower is better) Translates to: DRSCLKNNKPTQDSINYILPPSE*QEVLLP Trigger: AGGTAATAGAACTTCCTGGCATTCGGAAGGTGGAAG...TATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR GCA 90 bp | ACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACTTGGAGTTCACCGTCTaGAGAGTAAACAGCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TDPVSKTTNPLRTASTTYLEFTV*RVNSCF Trigger: AAAGCAGCTGTTTACTCTGCAGACGGTGAACTCCAA...GTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR GCA 90 bp | ACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACAGTGTCCATCACGCATaGCACCATAATGGTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TDPVSKTTNPLRTASTTYSVHHA*HHNGWK Trigger: TTTCCAACCATTATGGTGGCATGCGTGATGGACACT...GTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CCA 90 bp | GACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATAGTTCTTGAACACATTTaGCACAATGGAGCGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DRSCLKNNKPTQDSINYIVLEHI*HNGAVV Trigger: TACCACCGCTCCATTGTGCCAAATGTGTTCAAGAAC...TATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR TCA 90 bp | GAGTTCCAGGACACCCAAGAGCTACACAGACAGATCCTGTCTCAAAAACAACAAATTCTCATTCACAGGTaGGACACTATTGTCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EFQDTQELHRQILSQKQQILIHR*DTIVIK Trigger: TTTGATGACAATAGTGTCTCACCTGTGAATGAGAAT...TTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGCTCTTGGGTGTCCTGGAACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CCA 90 bp | ACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACGAAAAACGCTTCAGGTaGATAATGAGAACTTCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TDPVSKTTNPLRTASTTYEKRFR*IMRTSG Trigger: ACCCGAAGTTCTCATTATCCACCTGAAGCGTTTTTC...GTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| 3UTR CAA 72 bp | AAACCCACTCAGGACAGCATCAACTACATACCATACTaGACCTTCAGTAAGTCAACTGAACAAAGACATATG | + |
|
Preference number: 4 (lower is better) Translates to: KPTQDSINYIPY*TFSKSTEQRHM Trigger: CATATGTCTTTGTTCAGTTGACTTACTGAAGGTCAAGTATGGTATGTAGTTGATGCTGTCCTGAGTGGGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 90 bp | TCGCCCATTCCCGATTTGGCGCCACTGTTCATCCAGGTCTGGCATTaGCTCGGGCTGTGTGTCTCGGTCCTCAGCAGAGGCCGGGACGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPIPDLAPLFIQVWH*LGLCVSVLSRGRDG Trigger: GCCGTCCCGGCCTCTGCTGAGGACCGAGACACACAGCCCGAGGCAATGCCAGACCTGGATGAACAGTGGCGCCAAATCGGGAATGGGCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CCA 90 bp | CAGCTTTCGCCAGCTCGCAGTGGACGCTCTCGCCCATTCCCGATTTaGCGCCACTGTTCATCCAGGTCTGGCATTGCCTCGGGCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QLSPARSGRSRPFPI*RHCSSRSGIASGCV Trigger: CACACAGCCCGAGGCAATGCCAGACCTGGATGAACAGTGGCGCCAAATCGGGAATGGGCGAGAGCGTCCACTGCGAGCTGGCGAAAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 90 bp | CGGTCACTGGTTCCATTGGAGTTCACCGTCTGCAGAGTAAACAGCTaGTTTCGTCGTCGCCTTGGGGGCCACTGCGATGCGCGGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSLVPLEFTVCRVNS*FRRRLGGHCDARRL Trigger: CAGCCTCCGCGCATCGCAGTGGCCCCCAAGGCGACGACGAAAGCAGCTGTTTACTCTGCAGACGGTGAACTCCAATGGAACCAGTGACCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | AAGAGAGGGGGTAGACAGGAGAGAGTGGCAAAGGGGGCTTCCTTCTCCATGGTACGGTGCTGTTCTGGCTaGCGGCGGGGATCCATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KRGGRQERVAKGASFSMVRCCSG*RRGSMG Trigger: CCCCATGGATCCCCGCCGCAAGCCAGAACAGCACCG...TACCATGGAGAAGGAAGCCCCCTTTGCCACTCTCTCCTGTCTACCCCCTCTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 90 bp | AAGAGGGATGGGCATCTCTCAGTGACCCCAGAGCTGGTCCCAGCCTaGTCCTGCTCTGCTTCTCGGGTCCCATCATTAACAGTGGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: KRDGHLSVTPELVPA*SCSASRVPSLTVGA Trigger: TGCGCCCACTGTTAATGATGGGACCCGAGAAGCAGAGCAGGAGCAGGCTGGGACCAGCTCTGGGGTCACTGAGAGATGCCCATCCCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 90 bp | GCATCTCTCAGTGACCCCAGAGCTGGTCCCAGCCTGCTCCTGCTCTaGTTCTCGGGTCCCATCATTAACAGTGGGCGCAGACATTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASLSDPRAGPSLLLL*FSGPIINSGRRHFL Trigger: GAGGAAATGTCTGCGCCCACTGTTAATGATGGGACCCGAGAAGCAGAGCAGGAGCAGGCTGGGACCAGCTCTGGGGTCACTGAGAGATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 90 bp | GTCTGCAGAGTAAACAGCTGCTTTCGTCGTCGCCTTGGGGGCCACTaGGATGCGCGGAGGCTGTTGTCTAAGAGGGATGGGCATCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VCRVNSCFRRRLGGH*DARRLLSKRDGHLS Trigger: TGAGAGATGCCCATCCCTCTTAGACAACAGCCTCCGCGCATCGCAGTGGCCCCCAAGGCGACGACGAAAGCAGCTGTTTACTCTGCAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 90 bp | TCAGGGGAAGTGGTCCGGTCACTGGTTCCATTGGAGTTCACCGTCTaGAGAGTAAACAGCTGCTTTCGTCGTCGCCTTGGGGGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGEVVRSLVPLEFTV*RVNSCFRRRLGGHC Trigger: GCAGTGGCCCCCAAGGCGACGACGAAAGCAGCTGTTTACTCTGCAGACGGTGAACTCCAATGGAACCAGTGACCGGACCACTTCCCCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 90 bp | TCGGGTAGCATCCAGAGGTCCAGTTTCTTGGTGGCCAGCTGGTGCTaGTTGCAGGAGGAGCAGTACCAGGGGTTCTCCTTCTCCAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SGSIQRSSFLVASWC*LQEEQYQGFSFSRV Trigger: AACCCTGGAGAAGGAGAACCCCTGGTACTGCTCCTCCTGCAAGCAGCACCAGCTGGCCACCAAGAAACTGGACCTCTGGATGCTACCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CCA 90 bp | AGAACTTCGGGTAGCATCCAGAGGTCCAGTTTCTTGGTGGCCAGCTaGTGCTGCTTGCAGGAGGAGCAGTACCAGGGGTTCTCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RTSGSIQRSSFLVAS*CCLQEEQYQGFSFS Trigger: GGAGAAGGAGAACCCCTGGTACTGCTCCTCCTGCAAGCAGCACCAGCTGGCCACCAAGAAACTGGACCTCTGGATGCTACCCGAAGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CCA 90 bp | TATGCGTGGACAGAGCCACACACAGATCTGAGATATTGCCCTTCTTaGGGACTACAACCCGGTGCTGTTCTGGCTTGCGGCGGGGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: YAWTEPHTDLRYCPS*GLQPGAVLACGGDP Trigger: TGGATCCCCGCCGCAAGCCAGAACAGCACCGGGTTGTAGTCCCCAAGAAGGGCAATATCTCAGATCTGTGTGTGGCTCTGTCCACGCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | CACAGTGAGTTCCAGGACACCCAAGAGCTACACAGACAGATCCTGTCTCAAAAAGCTTTCGTCGTCGCCTaGGGGGCCACTGCGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: HSEFQDTQELHRQILSQKAFVVA*GATAMR Trigger: GCGCATCGCAGTGGCCCCCAAGGCGACGACGAAAGC...TTTTTGAGACAGGATCTGTCTGTGTAGCTCTTGGGTGTCCTGGAACTCACTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS TCA 90 bp | TCCAAAGAGCCCTCTGAGTTCTTGGTCCAGAGGCGCGTGTCTTCCTaGGGCTCTACCAGAAACTGCTCCCGAGCTGTTTGCAAGACTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SKEPSEFLVQRRVSS*GSTRNCSRAVCKTS Trigger: ACTAGTCTTGCAAACAGCTCGGGAGCAGTTTCTGGTAGAGCCTCAGGAAGACACGCGCCTCTGGACCAAGAACTCAGAGGGCTCTTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 90 bp | CAACACTTGTATGCGTGGACAGAGCCACACACAGATCTGAGATATTaGCCTTCTTGGGGACTACAACCCGGTGCTGTTCTGGCTTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: QHLYAWTEPHTDLRY*PSWGLQPGAVLACG Trigger: GCCGCAAGCCAGAACAGCACCGGGTTGTAGTCCCCAAGAAGGGCAATATCTCAGATCTGTGTGTGGCTCTGTCCACGCATACAAGTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS TCA 90 bp | AAGCAGCGTGATCTGTGTATTACACAGTCGATCCAAAGAGCCCTCTaGGTTCTTGGTCCAGAGGCGCGTGTCTTCCTGAGGCTCTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: KQRDLCITQSIQRAL*VLGPEARVFLRLYQ Trigger: CTGGTAGAGCCTCAGGAAGACACGCGCCTCTGGACCAAGAACTCAGAGGGCTCTTTGGATCGACTGTGTAATACACAGATCACGCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS TCA 90 bp | GTCTGGTGCAACACTTGTATGCGTGGACAGAGCCACACACAGATCTaGGATATTGCCCTTCTTGGGGACTACAACCCGGTGCTGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VWCNTCMRGQSHTQI*DIALLGDYNPVLFW Trigger: CCAGAACAGCACCGGGTTGTAGTCCCCAAGAAGGGCAATATCTCAGATCTGTGTGTGGCTCTGTCCACGCATACAAGTGTTGCACCAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | GCTACACAGACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAGCCACAGATGCCCGGTaGCCCCTGGAAGTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: ATQTDPVSKTTNPLRTASATDAR*PLEVLI Trigger: GATGAGGACTTCCAGGGGCAACCGGGCATCTGTGGC...TGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | AAGAGAGGGGGTAGACAGGAGAGAGTGGCAAAGGGGGCTTCCTTCTCCATGGTAACAGTGGTGAAGAGTTaGATGCACTCCTTCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KRGGRQERVAKGASFSMVTVVKS*MHSFSC Trigger: GCAGCTGAAGGAGTGCATCAAACTCTTCACCACTGT...TACCATGGAGAAGGAAGCCCCCTTTGCCACTCTCTCCTGTCTACCCCCTCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | GCTACACAGACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAGCCAGCTGGTGCTGCTaGCAGGAGGAGCAGTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ATQTDPVSKTTNPLRTASASWCC*QEEQYQ Trigger: CTGGTACTGCTCCTCCTGCAAGCAGCACCAGCTGGC...TGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | GCTACACAGACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAGTCAGCTGTGGCACATaGCTCAGGCACTGTAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ATQTDPVSKTTNPLRTASVSCGT*LRHCRA Trigger: GGCCCTACAGTGCCTGAGCAATGTGCCACAGCTGAC...TGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 90 bp | CTGGGCCAAGTGCCATCTTTGTTTCGAGTCTCCATGATGACCAACTaGCCAGTCTCAAGGCAGGCATCAAGCAGCGTGATCTGTGTATTA | + |
|
Preference number: 5 (lower is better) Translates to: LGQVPSLFRVSMMTN*PVSRQASSSVICVL Trigger: TAATACACAGATCACGCTGCTTGATGCCTGCCTTGAGACTGGGCAGTTGGTCATCATGGAGACTCGAAACAAAGATGGCACTTGGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | GCCAGGGGCATAGGGCCTCTTCTTTCTGAGAGAGTAATACAGCGGTACAAGAGAAAGGTCACAGAAACATaGCCACAATCAGGGCACACC | + |
|
Preference number: 5 (lower is better) Translates to: ARGIGPLLSERVIQRYKRKVTET*PQSGHT Trigger: GGTGTGCCCTGATTGTGGCAATGTTTCTGTGACCTT...TCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | TGCCAGCACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCCACTGGCCACTGTCCTaGTTGCAGGCAAATGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: CQHLGGRGTISELKASLIHWPLS*LQANVV Trigger: TACAACATTTGCCTGCAACAAGGACAGTGGCCAGTG...GATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTGCTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS TCA 90 bp | AAGAGCCCAGCATTGTTGATACAGCCAGGAAAGGTGCTAGCATCTTaGTCCCCTCCCTTCACGTACACCTCCCACTGTTTATACCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KSPALLIQPGKVLAS*SPPFTYTSHCLYQC Trigger: ACACTGGTATAAACAGTGGGAGGTGTACGTGAAGGGAGGGGATCAAGATGCTAGCACCTTTCCTGGCTGTATCAACAATGCTGGGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS TCA 90 bp | TGGGGTGCGCTCCCGCAAGTAAACAGGTACCACAATATCATCTCTTaGACCCTCAACCGGCTCAATCCGACCAGTCACCTCATATACAAA | + |
|
Preference number: 5 (lower is better) Translates to: WGALPQVNRYHNIIS*TLNRLNPTSHLIYK Trigger: TTTGTATATGAGGTGACTGGTCGGATTGAGCCGGTTGAGGGTTCAAGAGATGATATTGTGGTACCTGTTTACTTGCGGGAGCGCACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | GACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATAGAGCCCTCTGAGTTCTaGGTCCAGAGGCGCGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: DRSCLKNNKPTQDSINYIEPSEF*VQRRVS Trigger: AGACACGCGCCTCTGGACCAAGAACTCAGAGGGCTC...TATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | GCTACACAGACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCACGGTCACTGGTTCCATaGGAGTTCACCGTCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ATQTDPVSKTTNPLRTASRSLVP*EFTVCR Trigger: TCTGCAGACGGTGAACTCCAATGGAACCAGTGACCG...TGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | ACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACCAGAGGTCCAGTTTCTaGGTGGCCAGCTGGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TDPVSKTTNPLRTASTTYQRSSF*VASWCC Trigger: GCAGCACCAGCTGGCCACCAAGAAACTGGACCTCTG...GTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | GCCAGGGGCATAGGGCCTCTTCTTTCTGAGAGAGTAATACAGCGGTACAAGAGATCCATGATGTCAGAGTaGGGTGTAGAACTGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: ARGIGPLLSERVIQRYKRSMMSE*GVELET Trigger: TGTCTCCAGTTCTACACCCAACTCTGACATCATGGA...TCTCTTGTACCGCTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | CACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCCACACACACAGATCTGAGATATaGCCCTTCTTGGGGACTACA | + |
|
Preference number: 5 (lower is better) Translates to: HLGGRGTISELKASLIHTHRSEI*PFLGTT Trigger: TGTAGTCCCCAAGAAGGGCAATATCTCAGATCTGTG...TGTGTGGATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CCA 90 bp | AGACATCAGCTACTATCATCTTGTCTGGTGCAACACTTGTATGCGTaGACAGAGCCACACACAGATCTGAGATATTGCCCTTCTTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RHQLLSSCLVQHLYA*TEPHTDLRYCPSWG Trigger: TCCCCAAGAAGGGCAATATCTCAGATCTGTGTGTGGCTCTGTCCACGCATACAAGTGTTGCACCAGACAAGATGATAGTAGCTGATGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CCA 90 bp | GGTGCCCAAAAAGTATCAGACCATAGTAGGAGTTGTTGTAGTCTCTaGATGGGGTGCGCTCCCGCAAGTAAACAGGTACCACAATATCAT | + |
|
Preference number: 5 (lower is better) Translates to: GAQKVSDHSRSCCSL*MGCAPASKQVPQYH Trigger: ATGATATTGTGGTACCTGTTTACTTGCGGGAGCGCACCCCATCCAGAGACTACAACAACTCCTACTATGGTCTGATACTTTTTGGGCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CCA 90 bp | CCACTTCGTCATAATAACGCCTCTTCATATCTGGTTCCCAATCCATaGCAATGTATGGCTGGGTTTGCATTTCTTCAGGGGAAGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLRHNNASSYLVPNP*QCMAGFAFLQGKWS Trigger: GGACCACTTCCCCTGAAGAAATGCAAACCCAGCCATACATTGCCATGGATTGGGAACCAGATATGAAGAGGCGTTATTATGACGAAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | ACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACCATGTGTTGCCCAGATaGGTAAGGCCACAGATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TDPVSKTTNPLRTASTTYHVLPR*VRPQMP Trigger: GGGCATCTGTGGCCTTACCAATCTGGGCAACACATG...GTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | CACTTAGGAGGCAGAGGTACAATCTCTGAGTTAAAGGCCAGCCTGATCCACACAGCAAAATGGCCAACCTaGTTCTTGAACACATTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HLGGRGTISELKASLIHTAKWPT*FLNTFG Trigger: GCCAAATGTGTTCAAGAACAAGGTTGGCCATTTTGC...TGTGTGGATCAGGCTGGCCTTTAACTCAGAGATTGTACCTCTGCCTCCTAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | ACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACCACACCAGGGTGGACTaGAAGAGGCCATGGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TDPVSKTTNPLRTASTTYHTRVD*KRPWKV Trigger: CACTTTCCATGGCCTCTTCAAGTCCACCCTGGTGTG...GTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 90 bp | CTGAAGACATCAGCTACTATCATCTTGTCTGGTGCAACACTTGTATaGGTGGACAGAGCCACACACAGATCTGAGATATTGCCCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LKTSATIILSGATLV*VDRATHRSEILPFL Trigger: CAAGAAGGGCAATATCTCAGATCTGTGTGTGGCTCTGTCCACGCATACAAGTGTTGCACCAGACAAGATGATAGTAGCTGATGTCTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CCA 90 bp | CCCAAAAAGTATCAGACCATAGTAGGAGTTGTTGTAGTCTCTGGATaGGGTGCGCTCCCGCAAGTAAACAGGTACCACAATATCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PKKYQTIVGVVVVSG*GALPQVNRYHNIIS Trigger: AGAGATGATATTGTGGTACCTGTTTACTTGCGGGAGCGCACCCCATCCAGAGACTACAACAACTCCTACTATGGTCTGATACTTTTTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | CAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACCGGCCAAGTGCCATCTTaGTTTCGAGTCTCCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: QILSQKQQTHSGQHQLHTGQVPS*FRVSMM Trigger: CATCATGGAGACTCGAAACAAAGATGGCACTTGGCC...GGTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 90 bp | TCCGACCAGTCACCTCATATACAAAGATATCATCACGATCCAAGATaGCACTCAGAGGATCCTCCAGCTGGTAAAGCTTATAGAATCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SDQSPHIQRYHHDPR*HSEDPPAGKAYRIG Trigger: ACCGATTCTATAAGCTTTACCAGCTGGAGGATCCTCTGAGTGGCATCTTGGATCGTGATGATATCTTTGTATATGAGGTGACTGGTCGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 90 bp | AAAGTATCAGACCATAGTAGGAGTTGTTGTAGTCTCTGGATGGGGTaGGCTCCCGCAAGTAAACAGGTACCACAATATCATCTCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KVSDHSRSCCSLWMG*APASKQVPQYHLLN Trigger: GTTCAAGAGATGATATTGTGGTACCTGTTTACTTGCGGGAGCGCACCCCATCCAGAGACTACAACAACTCCTACTATGGTCTGATACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS TCA 90 bp | CACTCAGAGGATCCTCCAGCTGGTAAAGCTTATAGAATCGGTGACTaGAGACATCAGCTACTATCATCTTGTCTGGTGCAACACTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: HSEDPPAGKAYRIGD*RHQLLSSCLVQHLY Trigger: ATACAAGTGTTGCACCAGACAAGATGATAGTAGCTGATGTCTTCAGTCACCGATTCTATAAGCTTTACCAGCTGGAGGATCCTCTGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CCA 90 bp | CTTCATCAACTTTCTCATCCCCATCATCCTCATCTGAGGTGGGTTTaGTCACATATCGTGAAAGTCGGTACATCAAGATGTTATATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LHQLSHPHHPHLRWV*SHIVKVGTSRCYIG Trigger: GCCTATATAACATCTTGATGTACCGACTTTCACGATATGTGACCAAACCCACCTCAGATGAGGATGATGGGGATGAGAAAGTTGATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CCA 90 bp | CCTCATCTTCATCAACTTTCTCATCCCCATCATCCTCATCTGAGGTaGGTTTGGTCACATATCGTGAAAGTCGGTACATCAAGATGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: PHLHQLSHPHHPHLR*VWSHIVKVGTSRCY Trigger: ATAACATCTTGATGTACCGACTTTCACGATATGTGACCAAACCCACCTCAGATGAGGATGATGGGGATGAGAAAGTTGATGAAGATGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | ACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACAATGTATGGCTGGGTTaGCATTTCTTCAGGGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TDPVSKTTNPLRTASTTYNVWLG*HFFRGS Trigger: ACTTCCCCTGAAGAAATGCAAACCCAGCCATACATT...GTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS-3UTR CAA 90 bp | GCTACACAGACAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCATTCTCCCGGGAAATTTaGGAAAATGAAAAACGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ATQTDPVSKTTNPLRTASFSREI*ENEKRF Trigger: GAAGCGTTTTTCATTTTCCAAAATTTCCCGGGAGAA...TGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTGTCTGTGTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 90 bp | TGTTGTATAGTGTCCATCACGCATGCCACCATAATGGTTGGAAACTaGGATGAGATCATATTTGTAGAGGTCTGGAGAAGACTCATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CCIVSITHATIMVGN*DEIIFVEVWRRLIL Trigger: AAGAATGAGTCTTCTCCAGACCTCTACAAATATGATCTCATCGCAGTTTCCAACCATTATGGTGGCATGCGTGATGGACACTATACAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS-3UTR CAA 90 bp | CAGATCCTGTCTCAAAAACAACAAACCCACTCAGGACAGCATCAACTACATACCGACTCATTCTTTGGTTaGATGACAAACTCAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QILSQKQQTHSGQHQLHTDSFFG*MTNSEK Trigger: TTTCTCTGAGTTTGTCATCAAACCAAAGAATGAGTC...GGTATGTAGTTGATGCTGTCCTGAGTGGGTTTGTTGTTTTTGAGACAGGATCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CAA 90 bp | CTCGCCCATTCCCGATTTGGCGCCACTGTTCATCCAGGTCTGGCATaGCCTCGGGCTGTGTGTCTCGGTCCTCAGCAGAGGCCGGGACGG | + |
|
Preference number: 6 (lower is better) Translates to: LAHSRFGATVHPGLA*PRAVCLGPQQRPGR Trigger: CCGTCCCGGCCTCTGCTGAGGACCGAGACACACAGCCCGAGGCAATGCCAGACCTGGATGAACAGTGGCGCCAAATCGGGAATGGGCGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CAA 72 bp | CGTCGCCTTGGGGGCCACTGCGATGCGCGGAGGCTGTaGTCTAAGAGGGATGGGCATCTCTCAGTGACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RRLGGHCDARRL*SKRDGHLSVTP Trigger: TGGGGTCACTGAGAGATGCCCATCCCTCTTAGACAACAGCCTCCGCGCATCGCAGTGGCCCCCAAGGCGACG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CAA 90 bp | CCAGCTTTCGCCAGCTCGCAGTGGACGCTCTCGCCCATTCCCGATTaGGCGCCACTGTTCATCCAGGTCTGGCATTGCCTCGGGCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PAFASSQWTLSPIPD*APLFIQVWHCLGLC Trigger: ACACAGCCCGAGGCAATGCCAGACCTGGATGAACAGTGGCGCCAAATCGGGAATGGGCGAGAGCGTCCACTGCGAGCTGGCGAAAGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CAA 90 bp | TGCTTTCGTCGTCGCCTTGGGGGCCACTGCGATGCGCGGAGGCTGTaGTCTAAGAGGGATGGGCATCTCTCAGTGACCCCAGAGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: CFRRRLGGHCDARRL*SKRDGHLSVTPELV Trigger: GACCAGCTCTGGGGTCACTGAGAGATGCCCATCCCTCTTAGACAACAGCCTCCGCGCATCGCAGTGGCCCCCAAGGCGACGACGAAAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 72 bp | CCCGATTTGGCGCCACTGTTCATCCAGGTCTGGCATTaGCTCGGGCTGTGTGTCTCGGTCCTCAGCAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PDLAPLFIQVWH*LGLCVSVLSRG Trigger: GCCTCTGCTGAGGACCGAGACACACAGCCCGAGGCAATGCCAGACCTGGATGAACAGTGGCGCCAAATCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 72 bp | GTAAACAGCTGCTTTCGTCGTCGCCTTGGGGGCCACTaGGATGCGCGGAGGCTGTTGTCTAAGAGGGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: VNSCFRRRLGGH*DARRLLSKRDG Trigger: CCCATCCCTCTTAGACAACAGCCTCCGCGCATCGCAGTGGCCCCCAAGGCGACGACGAAAGCAGCTGTTTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CAA 72 bp | TCCCGATTTGGCGCCACTGTTCATCCAGGTCTGGCATaGCCTCGGGCTGTGTGTCTCGGTCCTCAGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRFGATVHPGLA*PRAVCLGPQQR Trigger: CCTCTGCTGAGGACCGAGACACACAGCCCGAGGCAATGCCAGACCTGGATGAACAGTGGCGCCAAATCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 72 bp | GGGCATCTCTCAGTGACCCCAGAGCTGGTCCCAGCCTaGTCCTGCTCTGCTTCTCGGGTCCCATCATTAACA | + |
|
Preference number: 6 (lower is better) Translates to: GHLSVTPELVPA*SCSASRVPSLT Trigger: TGTTAATGATGGGACCCGAGAAGCAGAGCAGGAGCAGGCTGGGACCAGCTCTGGGGTCACTGAGAGATGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CCA 72 bp | TTTCTCCACAAGGAACCAGCTTTCGCCAGCTCGCAGTaGACGCTCTCGCCCATTCCCGATTTGGCGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: FLHKEPAFASSQ*TLSPIPDLAPL Trigger: CAGTGGCGCCAAATCGGGAATGGGCGAGAGCGTCCACTGCGAGCTGGCGAAAGCTGGTTCCTTGTGGAGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CAA 90 bp | GTATGCGTGGACAGAGCCACACACAGATCTGAGATATTGCCCTTCTaGGGGACTACAACCCGGTGCTGTTCTGGCTTGCGGCGGGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: VCVDRATHRSEILPF*GTTTRCCSGLRRGS Trigger: GGATCCCCGCCGCAAGCCAGAACAGCACCGGGTTGTAGTCCCCAAGAAGGGCAATATCTCAGATCTGTGTGTGGCTCTGTCCACGCATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS TCA 72 bp | CCCTCTGAGTTCTTGGTCCAGAGGCGCGTGTCTTCCTaGGGCTCTACCAGAAACTGCTCCCGAGCTGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PSEFLVQRRVSS*GSTRNCSRAVC Trigger: GCAAACAGCTCGGGAGCAGTTTCTGGTAGAGCCTCAGGAAGACACGCGCCTCTGGACCAAGAACTCAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 72 bp | GTTCCATTGGAGTTCACCGTCTGCAGAGTAAACAGCTaGTTTCGTCGTCGCCTTGGGGGCCACTGCGATGCG | + |
|
Preference number: 6 (lower is better) Translates to: VPLEFTVCRVNS*FRRRLGGHCDA Trigger: CGCATCGCAGTGGCCCCCAAGGCGACGACGAAAGCAGCTGTTTACTCTGCAGACGGTGAACTCCAATGGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CCA 72 bp | GAACTTCGGGTAGCATCCAGAGGTCCAGTTTCTTGGTaGCCAGCTGGTGCTGCTTGCAGGAGGAGCAGTACC | + |
|
Preference number: 6 (lower is better) Translates to: ELRVASRGPVSW*PAGAACRRSST Trigger: GGTACTGCTCCTCCTGCAAGCAGCACCAGCTGGCCACCAAGAAACTGGACCTCTGGATGCTACCCGAAGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CAA 90 bp | AGGTGGATAATGAGAACTTCGGGTAGCATCCAGAGGTCCAGTTTCTaGGTGGCCAGCTGGTGCTGCTTGCAGGAGGAGCAGTACCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RWIMRTSGSIQRSSF*VASWCCLQEEQYQG Trigger: CCCCTGGTACTGCTCCTCCTGCAAGCAGCACCAGCTGGCCACCAAGAAACTGGACCTCTGGATGCTACCCGAAGTTCTCATTATCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS GCA 72 bp | GTGGTCCGGTCACTGGTTCCATTGGAGTTCACCGTCTaGAGAGTAAACAGCTGCTTTCGTCGTCGCCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VVRSLVPLEFTV*RVNSCFRRRLG Trigger: CCCAAGGCGACGACGAAAGCAGCTGTTTACTCTGCAGACGGTGAACTCCAATGGAACCAGTGACCGGACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CCA 72 bp | ACAGAGCCACACACAGATCTGAGATATTGCCCTTCTTaGGGACTACAACCCGGTGCTGTTCTGGCTTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: TEPHTDLRYCPS*GLQPGAVLACG Trigger: GCCGCAAGCCAGAACAGCACCGGGTTGTAGTCCCCAAGAAGGGCAATATCTCAGATCTGTGTGTGGCTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CAA 72 bp | GACAGAGCCACACACAGATCTGAGATATTGCCCTTCTaGGGGACTACAACCCGGTGCTGTTCTGGCTTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: DRATHRSEILPF*GTTTRCCSGLR Trigger: CCGCAAGCCAGAACAGCACCGGGTTGTAGTCCCCAAGAAGGGCAATATCTCAGATCTGTGTGTGGCTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS CAA 90 bp | GCAACACTTGTATGCGTGGACAGAGCCACACACAGATCTGAGATATaGCCCTTCTTGGGGACTACAACCCGGTGCTGTTCTGGCTTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ATLVCVDRATHRSEI*PFLGTTTRCCSGLR Trigger: CCGCAAGCCAGAACAGCACCGGGTTGTAGTCCCCAAGAAGGGCAATATCTCAGATCTGTGTGTGGCTCTGTCCACGCATACAAGTGTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
||
| CDS TCA 72 bp | GAATCATTTCGTCGTTTATGGTTCTGCCAGGCTTCCTaGGCCACTTCCAGATCAGGCCGCCCAGCACCATTG | + |
|
Preference number: 6 (lower is better) Translates to: ESFRRLWFCQAS*ATSRSGRPAPL Trigger: CAATGGTGCTGGGCGGCCTGATCTGGAAGTGGCTCAGGAAGCCTGGCAGAACCATAAACGACGAAATGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CAA 90 bp | TGGGTTTGCATTTCTTCAGGGGAAGTGGTCCGGTCACTGGTTCCATaGGAGTTCACCGTCTGCAGAGTAAACAGCTGCTTTCGTCGTCGC | + |
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Preference number: 6 (lower is better) Translates to: WVCISSGEVVRSLVP*EFTVCRVNSCFRRR Trigger: GCGACGACGAAAGCAGCTGTTTACTCTGCAGACGGTGAACTCCAATGGAACCAGTGACCGGACCACTTCCCCTGAAGAAATGCAAACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS TCA 72 bp | GATCTGTGTATTACACAGTCGATCCAAAGAGCCCTCTaGGTTCTTGGTCCAGAGGCGCGTGTCTTCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: DLCITQSIQRAL*VLGPEARVFLR Trigger: CCTCAGGAAGACACGCGCCTCTGGACCAAGAACTCAGAGGGCTCTTTGGATCGACTGTGTAATACACAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS TCA 72 bp | CCAACTGCCCAGTCTCAAGGCAGGCATCAAGCAGCGTaGTCTGTGTATTACACAGTCGATCCAAAGAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: PTAQSQGRHQAA*SVYYTVDPKSP Trigger: AGGGCTCTTTGGATCGACTGTGTAATACACAGATCACGCTGCTTGATGCCTGCCTTGAGACTGGGCAGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS TCA 72 bp | TCATCCTCGTCCGGTATGTTGTTCATGCCACACAGCTaGGCACTGGGCCAAGTGCCATCTTTGTTTCGAGTC | + |
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Preference number: 6 (lower is better) Translates to: SSSSGMLFMPHS*ALGQVPSLFRV Trigger: GACTCGAAACAAAGATGGCACTTGGCCCAGTGCTCAGCTGTGTGGCATGAACAACATACCGGACGAGGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS GCA 72 bp | TATGCGTGGACAGAGCCACACACAGATCTGAGATATTaGCCTTCTTGGGGACTACAACCCGGTGCTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: YAWTEPHTDLRY*PSWGLQPGAVL Trigger: CAGAACAGCACCGGGTTGTAGTCCCCAAGAAGGGCAATATCTCAGATCTGTGTGTGGCTCTGTCCACGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CAA 72 bp | GTATGCGTGGACAGAGCCACACACAGATCTGAGATATaGCCCTTCTTGGGGACTACAACCCGGTGCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: VCVDRATHRSEI*PFLGTTTRCCS Trigger: AGAACAGCACCGGGTTGTAGTCCCCAAGAAGGGCAATATCTCAGATCTGTGTGTGGCTCTGTCCACGCATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS TCA 72 bp | AACACTTGTATGCGTGGACAGAGCCACACACAGATCTaGGATATTGCCCTTCTTGGGGACTACAACCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: NTCMRGQSHTQI*DIALLGDYNPV Trigger: CACCGGGTTGTAGTCCCCAAGAAGGGCAATATCTCAGATCTGTGTGTGGCTCTGTCCACGCATACAAGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS TCA 72 bp | CTCCCGCAAGTAAACAGGTACCACAATATCATCTCTTaGACCCTCAACCGGCTCAATCCGACCAGTCACCTC | + |
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Preference number: 6 (lower is better) Translates to: LPQVNRYHNIIS*TLNRLNPTSHL Trigger: GAGGTGACTGGTCGGATTGAGCCGGTTGAGGGTTCAAGAGATGATATTGTGGTACCTGTTTACTTGCGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS GCA 72 bp | ACAAACTCAGAGAAATCCAGGTCCCGGATAGGAAACTaGACCAGGGTGTCCAGCTTCTCCCGGGAAATTTTG | + |
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Preference number: 6 (lower is better) Translates to: TNSEKSRSRIGN*TRVSSFSREIL Trigger: CAAAATTTCCCGGGAGAAGCTGGACACCCTGGTGCAGTTTCCTATCCGGGACCTGGATTTCTCTGAGTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CCA 72 bp | CAATGTATGGCTGGGTTTGCATTTCTTCAGGGGAAGTaGTCCGGTCACTGGTTCCATTGGAGTTCACCGTCT | + |
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Preference number: 6 (lower is better) Translates to: QCMAGFAFLQGK*SGHWFHWSSPS Trigger: AGACGGTGAACTCCAATGGAACCAGTGACCGGACCACTTCCCCTGAAGAAATGCAAACCCAGCCATACATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CAA 72 bp | GCTCCCGCAAGTAAACAGGTACCACAATATCATCTCTaGAACCCTCAACCGGCTCAATCCGACCAGTCACCT | + |
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Preference number: 6 (lower is better) Translates to: APASKQVPQYHL*NPQPAQSDQSP Trigger: AGGTGACTGGTCGGATTGAGCCGGTTGAGGGTTCAAGAGATGATATTGTGGTACCTGTTTACTTGCGGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CAA 90 bp | AAAGAGCCCAGCATTGTTGATACAGCCAGGAAAGGTGCTAGCATCTaGATCCCCTCCCTTCACGTACACCTCCCACTGTTTATACCAGTG | + |
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Preference number: 6 (lower is better) Translates to: KEPSIVDTARKGASI*IPSLHVHLPLFIPV Trigger: CACTGGTATAAACAGTGGGAGGTGTACGTGAAGGGAGGGGATCAAGATGCTAGCACCTTTCCTGGCTGTATCAACAATGCTGGGCTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CAA 90 bp | ATGGGGTGCGCTCCCGCAAGTAAACAGGTACCACAATATCATCTCTaGAACCCTCAACCGGCTCAATCCGACCAGTCACCTCATATACAA | + |
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Preference number: 6 (lower is better) Translates to: MGCAPASKQVPQYHL*NPQPAQSDQSPHIQ Trigger: TTGTATATGAGGTGACTGGTCGGATTGAGCCGGTTGAGGGTTCAAGAGATGATATTGTGGTACCTGTTTACTTGCGGGAGCGCACCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS TCA 72 bp | GCATTGTTGATACAGCCAGGAAAGGTGCTAGCATCTTaGTCCCCTCCCTTCACGTACACCTCCCACTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: ALLIQPGKVLAS*SPPFTYTSHCL Trigger: TAAACAGTGGGAGGTGTACGTGAAGGGAGGGGATCAAGATGCTAGCACCTTTCCTGGCTGTATCAACAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CCA 72 bp | CCTCTTCATATCTGGTTCCCAATCCATGGCAATGTATaGCTGGGTTTGCATTTCTTCAGGGGAAGTGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: PLHIWFPIHGNV*LGLHFFRGSGP Trigger: CGGACCACTTCCCCTGAAGAAATGCAAACCCAGCCATACATTGCCATGGATTGGGAACCAGATATGAAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CAA 72 bp | AGCATTGTTGATACAGCCAGGAAAGGTGCTAGCATCTaGATCCCCTCCCTTCACGTACACCTCCCACTGTTT | + |
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Preference number: 6 (lower is better) Translates to: SIVDTARKGASI*IPSLHVHLPLF Trigger: AAACAGTGGGAGGTGTACGTGAAGGGAGGGGATCAAGATGCTAGCACCTTTCCTGGCTGTATCAACAATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CAA 72 bp | ACTTCCACCTTCCGAATGCCAGGAAGTTCTATTACCTaGCGCTCAATAGGTGGCTGGCCATCCATTAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: TSTFRMPGSSIT*RSIGGWPSIKP Trigger: TGGCTTAATGGATGGCCAGCCACCTATTGAGCGCAAGGTAATAGAACTTCCTGGCATTCGGAAGGTGGAAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CAA 72 bp | ATTTCTTCAGGGGAAGTGGTCCGGTCACTGGTTCCATaGGAGTTCACCGTCTGCAGAGTAAACAGCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ISSGEVVRSLVP*EFTVCRVNSCF Trigger: AAAGCAGCTGTTTACTCTGCAGACGGTGAACTCCAATGGAACCAGTGACCGGACCACTTCCCCTGAAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS TCA 72 bp | CCTTCTAGCAGTCTCTCCCTGAGATGCCAGCTTATCTaGTCTTCAAAGAGCCCAGCATTGTTGATACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PSSSLSLRCQLI*SSKSPALLIQP Trigger: TGGCTGTATCAACAATGCTGGGCTCTTTGAAGATCAGATAAGCTGGCATCTCAGGGAGAGACTGCTAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS GCA 72 bp | GACCATAGTAGGAGTTGTTGTAGTCTCTGGATGGGGTaGGCTCCCGCAAGTAAACAGGTACCACAATATCAT | + |
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Preference number: 6 (lower is better) Translates to: DHSRSCCSLWMG*APASKQVPQYH Trigger: ATGATATTGTGGTACCTGTTTACTTGCGGGAGCGCACCCCATCCAGAGACTACAACAACTCCTACTATGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS GCA 72 bp | TGTCATCAAAGTAGTGCCACTGGCCACTGTCCTTGTTaGAGGCAAATGTTGTATAGTGTCCATCACGCATGC | + |
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Preference number: 6 (lower is better) Translates to: CHQSSATGHCPC*RQMLYSVHHAC Trigger: GCATGCGTGATGGACACTATACAACATTTGCCTGCAACAAGGACAGTGGCCAGTGGCACTACTTTGATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CCA 72 bp | TATCAGACCATAGTAGGAGTTGTTGTAGTCTCTGGATaGGGTGCGCTCCCGCAAGTAAACAGGTACCACAAT | + |
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Preference number: 6 (lower is better) Translates to: YQTIVGVVVVSG*GALPQVNRYHN Trigger: ATTGTGGTACCTGTTTACTTGCGGGAGCGCACCCCATCCAGAGACTACAACAACTCCTACTATGGTCTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CCA 72 bp | AAAGTATCAGACCATAGTAGGAGTTGTTGTAGTCTCTaGATGGGGTGCGCTCCCGCAAGTAAACAGGTACCA | + |
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Preference number: 6 (lower is better) Translates to: KVSDHSRSCCSL*MGCAPASKQVP Trigger: TGGTACCTGTTTACTTGCGGGAGCGCACCCCATCCAGAGACTACAACAACTCCTACTATGGTCTGATACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CCA 72 bp | AGTGGTGAAGAGTTTGATGCACTCCTTCAGCTGCACTaGACTTTTCTTCAGCATGTAGCCCACACAGTCATG | + |
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Preference number: 6 (lower is better) Translates to: SGEEFDALLQLH*TFLQHVAHTVM Trigger: CATGACTGTGTGGGCTACATGCTGAAGAAAAGTCCAGTGCAGCTGAAGGAGTGCATCAAACTCTTCACCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CAA 90 bp | CGGATAGGAAACTGCACCAGGGTGTCCAGCTTCTCCCGGGAAATTTaGGAAAATGAAAAACGCTTCAGGTGGATAATGAGAACTTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: RIGNCTRVSSFSREI*ENEKRFRWIMRTSG Trigger: ACCCGAAGTTCTCATTATCCACCTGAAGCGTTTTTCATTTTCCAAAATTTCCCGGGAGAAGCTGGACACCCTGGTGCAGTTTCCTATCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CCA 72 bp | AGCCTCCACTTCGTCATAATAACGCCTCTTCATATCTaGTTCCCAATCCATGGCAATGTATGGCTGGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SLHFVIITPLHI*FPIHGNVWLGL Trigger: CAAACCCAGCCATACATTGCCATGGATTGGGAACCAGATATGAAGAGGCGTTATTATGACGAAGTGGAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CAA 72 bp | AGACATCAGCTACTATCATCTTGTCTGGTGCAACACTaGTATGCGTGGACAGAGCCACACACAGATCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: RHQLLSSCLVQH*YAWTEPHTDLR Trigger: TCTCAGATCTGTGTGTGGCTCTGTCCACGCATACAAGTGTTGCACCAGACAAGATGATAGTAGCTGATGTCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CAA 90 bp | CCAGCACCATTGCATAGCTCAACATATTCTTTCTTTTTGACCCGATaGAGATCCTCATGTAGCCCATCCAGGAGGAATGACAGTAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: PAPLHSSTYSFFLTR*RSSCSPSRRNDSSS Trigger: GGAACTACTGTCATTCCTCCTGGATGGGCTACATGAGGATCTCAATCGGGTCAAAAAGAAAGAATATGTTGAGCTATGCAATGGTGCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS GCA 72 bp | TCAGCTACTATCATCTTGTCTGGTGCAACACTTGTATaGGTGGACAGAGCCACACACAGATCTGAGATATTG | + |
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Preference number: 6 (lower is better) Translates to: SATIILSGATLV*VDRATHRSEIL Trigger: CAATATCTCAGATCTGTGTGTGGCTCTGTCCACGCATACAAGTGTTGCACCAGACAAGATGATAGTAGCTGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS GCA 72 bp | GTGTCCATCACGCATGCCACCATAATGGTTGGAAACTaGGATGAGATCATATTTGTAGAGGTCTGGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: VSITHATIMVGN*DEIIFVEVWRR Trigger: TCTTCTCCAGACCTCTACAAATATGATCTCATCGCAGTTTCCAACCATTATGGTGGCATGCGTGATGGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CCA 72 bp | CTTTCTCATCCCCATCATCCTCATCTGAGGTGGGTTTaGTCACATATCGTGAAAGTCGGTACATCAAGATGT | + |
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Preference number: 6 (lower is better) Translates to: LSHPHHPHLRWV*SHIVKVGTSRC Trigger: ACATCTTGATGTACCGACTTTCACGATATGTGACCAAACCCACCTCAGATGAGGATGATGGGGATGAGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CCA 72 bp | CATCAACTTTCTCATCCCCATCATCCTCATCTGAGGTaGGTTTGGTCACATATCGTGAAAGTCGGTACATCA | + |
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Preference number: 6 (lower is better) Translates to: HQLSHPHHPHLR*VWSHIVKVGTS Trigger: TGATGTACCGACTTTCACGATATGTGACCAAACCCACCTCAGATGAGGATGATGGGGATGAGAAAGTTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CCA 72 bp | CATAATAACGCCTCTTCATATCTGGTTCCCAATCCATaGCAATGTATGGCTGGGTTTGCATTTCTTCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: HNNASSYLVPNP*QCMAGFAFLQG Trigger: CCCCTGAAGAAATGCAAACCCAGCCATACATTGCCATGGATTGGGAACCAGATATGAAGAGGCGTTATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CAA 72 bp | ACTTTCTCATCCCCATCATCCTCATCTGAGGTGGGTTaGGTCACATATCGTGAAAGTCGGTACATCAAGATG | + |
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Preference number: 6 (lower is better) Translates to: TFSSPSSSSEVG*VTYRESRYIKM Trigger: CATCTTGATGTACCGACTTTCACGATATGTGACCAAACCCACCTCAGATGAGGATGATGGGGATGAGAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CAA 72 bp | AACTGCACCAGGGTGTCCAGCTTCTCCCGGGAAATTTaGGAAAATGAAAAACGCTTCAGGTGGATAATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: NCTRVSSFSREI*ENEKRFRWIMR Trigger: TCTCATTATCCACCTGAAGCGTTTTTCATTTTCCAAAATTTCCCGGGAGAAGCTGGACACCCTGGTGCAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS TCA 72 bp | GATCCTCCAGCTGGTAAAGCTTATAGAATCGGTGACTaGAGACATCAGCTACTATCATCTTGTCTGGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: DPPAGKAYRIGD*RHQLLSSCLVQ Trigger: TTGCACCAGACAAGATGATAGTAGCTGATGTCTTCAGTCACCGATTCTATAAGCTTTACCAGCTGGAGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS TCA 72 bp | CATCACGCATGCCACCATAATGGTTGGAAACTGCGATaGGATCATATTTGTAGAGGTCTGGAGAAGACTCAT | + |
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Preference number: 6 (lower is better) Translates to: HHACHHNGWKLR*DHICRGLEKTH Trigger: ATGAGTCTTCTCCAGACCTCTACAAATATGATCTCATCGCAGTTTCCAACCATTATGGTGGCATGCGTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS GCA 72 bp | TCACCTCATATACAAAGATATCATCACGATCCAAGATaGCACTCAGAGGATCCTCCAGCTGGTAAAGCTTAT | + |
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Preference number: 6 (lower is better) Translates to: SPHIQRYHHDPR*HSEDPPAGKAY Trigger: ATAAGCTTTACCAGCTGGAGGATCCTCTGAGTGGCATCTTGGATCGTGATGATATCTTTGTATATGAGGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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| CDS CAA 90 bp | TCTTCATCAACTTTCTCATCCCCATCATCCTCATCTGAGGTGGGTTaGGTCACATATCGTGAAAGTCGGTACATCAAGATGTTATATAGG | + |
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Preference number: 6 (lower is better) Translates to: SSSTFSSPSSSSEVG*VTYRESRYIKMLYR Trigger: CCTATATAACATCTTGATGTACCGACTTTCACGATATGTGACCAAACCCACCTCAGATGAGGATGATGGGGATGAGAAAGTTGATGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033383.3 |
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