Pregenerated sensors for USP10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031826Ensembl transcript IDs: ENSMUST00000108982.11, ENSMUST00000108988.9, ENSMUST00000134729.2, ENSMUST00000144458.8
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGGAGATTACACAGCAGACACTGGGAATTGTCAGTCCATCATTGTaGCCACTGTTCATGTGTACACAGCATGAATGTGATTTGAAATCT | + |
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Preference number: 1 (lower is better) Translates to: REITQQTLGIVSPSL*PLFMCTQHECDLKS Trigger: AGATTTCAAATCACATTCATGCTGTGTACACATGAACAGTGGGCACAATGATGGACTGACAATTCCCAGTGTCTGCTGTGTAATCTCCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR-3UTR GCA 90 bp | CGGTGCGAGCCGCCTCCTCCGCCCGGGAACCAGCGGTTCTTCAGAAGCGGCGGCTCAGTCAGCACGAGCTaGGCTGTGCGGGCCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: RCEPPPPPGNQRFFRSGGSVSTS*AVRALR Trigger: CCTGAGGGCCCGCACAGCGCAGCTCGTGCTGACTGA...GCCGCCGCTTCTGAAGAACCGCTGGTTCCCGGGCGGAGGAGGCGGCTCGCACCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR-3UTR TCA 90 bp | TGCGCTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCACGGGCGCAGAGGGAGAGGTGGGTAGTGAGTaGGTTGGGAACTGTAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: CAVRALRHLPSKPTGAEGEVGSE*VGNCRK Trigger: CTTCCTACAGTTCCCAACTCACTCACTACCCACCTC...TCCCTCTGCGCCCGTGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCTTCAGAAGCGGCGGCTCTCGTGTGCCCTCACCCAGGCAACAGTCCAGCTTTCAGTCAGCACGAGCTaGGCTGTGCGGGCCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: VLQKRRLSCALTQATVQLSVSTS*AVRALR Trigger: CCTGAGGGCCCGCACAGCGCAGCTCGTGCTGACTGA...AAGCTGGACTGTTGCCTGGGTGAGGGCACACGAGAGCCGCCGCTTCTGAAGAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCACGGGCGCAGAGGGAGTCTGAGGTGGGTAGTGAGTaGGTTGGGAACTGTAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LCGPSGTFHPSPRAQRESEVGSE*VGNCRK Trigger: CTTCCTACAGTTCCCAACTCACTCACTACCCACCTC...AGACTCCCTCTGCGCCCGTGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR-3UTR GCA 90 bp | CCATCATTGTGCCCACTGTTCATGTGTACACAGCATGAATGTGATTTGAAATCTGCACGAGCTGCGCTGTaGGGGCCCTCAGGCACCTTC | + |
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Preference number: 2 (lower is better) Translates to: PSLCPLFMCTQHECDLKSARAAL*GPSGTF Trigger: GAAGGTGCCTGAGGGCCCGCACAGCGCAGCTCGTGC...AGATTTCAAATCACATTCATGCTGTGTACACATGAACAGTGGGCACAATGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR-3UTR TCA 90 bp | CCATCATTGTGCCCACTGTTCATGTGTACACAGCATGAATGTGATTTGAAATCTCAACAGTCCAGCTTCTaGAGTCAGTCAGCACGAGCT | + |
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Preference number: 2 (lower is better) Translates to: PSLCPLFMCTQHECDLKSQQSSF*SQSARA Trigger: AGCTCGTGCTGACTGACTTCAGAAGCTGGACTGTTG...AGATTTCAAATCACATTCATGCTGTGTACACATGAACAGTGGGCACAATGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR CCA 72 bp | TGCTGGTGCGGGACTTATTCCACTACGCGATCAGACTaGGACACGGTGCGAGCCGCCTCCTCCGCCCGGGAA | + |
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Preference number: 3 (lower is better) Translates to: CWCGTYSTTRSD*DTVRAASSARE Trigger: TTCCCGGGCGGAGGAGGCGGCTCGCACCGTGTCCCAGTCTGATCGCGTAGTGGAATAAGTCCCGCACCAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR TCA 72 bp | TCTCGTGTGCCCTCACCCAGGCAACAGTCCAGCTTCTaGAGTCAGTCAGCACGAGCTGCGCTGTGCGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: SRVPSPRQQSSF*SQSARAALCGP Trigger: GGGCCCGCACAGCGCAGCTCGTGCTGACTGACTTCAGAAGCTGGACTGTTGCCTGGGTGAGGGCACACGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR-3UTR CAA 90 bp | GACACGGTGCGAGCCGCCTCCTCCGCCCGGGAACCAGCGGTTCTTCAGAAGCGGTGGGTAGTGAGTGAGTaGGGAACTGTAGGAAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: DTVRAASSAREPAVLQKRWVVSE*GTVGSS Trigger: GCTGCTTCCTACAGTTCCCAACTCACTCACTACCCA...CCGCTTCTGAAGAACCGCTGGTTCCCGGGCGGAGGAGGCGGCTCGCACCGTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR GCA 72 bp | GCAACAGTCCAGCTTCTGAAGTCAGTCAGCACGAGCTaGGCTGTGCGGGCCCTCAGGCACCTTCCATCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: ATVQLLKSVSTS*AVRALRHLPSK Trigger: CTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCAGCTCGTGCTGACTGACTTCAGAAGCTGGACTGTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR GCA 72 bp | GGAACCAGCGGTTCTTCAGAAGCGGCGGCTCTCGTGTaGCCTCACCCAGGCAACAGTCCAGCTTCTGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GTSGSSEAAALV*PHPGNSPASEV Trigger: GACTTCAGAAGCTGGACTGTTGCCTGGGTGAGGGCACACGAGAGCCGCCGCTTCTGAAGAACCGCTGGTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR CCA 72 bp | CACTGTGTACGTGGGGGACACGGCATCAGAGAGGCGTaGCGGGAGATTACACAGCAGACACTGGGAATTGTC | + |
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Preference number: 3 (lower is better) Translates to: HCVRGGHGIREA*REITQQTLGIV Trigger: GACAATTCCCAGTGTCTGCTGTGTAATCTCCCGCCACGCCTCTCTGATGCCGTGTCCCCCACGTACACAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR CCA 72 bp | CGCAGAGGGAGTCTCTCTACAGAGCCACTAGAGAGGTaGGTAGTGAGTGAGTTGGGAACTGTAGGAAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: RRGSLSTEPLER*VVSELGTVGSS Trigger: GCTGCTTCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAGTGGCTCTGTAGAGAGACTCCCTCTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR TCA 72 bp | TCTCTCTACAGAGCCACTAGAGAGGTGGGTAGTGAGTaGGTTGGGAACTGTAGGAAGCAGCGTCAGGCACAC | + |
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Preference number: 3 (lower is better) Translates to: SLYRATREVGSE*VGNCRKQRQAH Trigger: GTGTGCCTGACGCTGCTTCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAGTGGCTCTGTAGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108988.9 ENSMUST00000134729.2 ENSMUST00000144458.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGAGCCACTAGAGAGGTGGGTAGTGAGTGAGTTGGGAACTGTAGGAAGCAGCTGGGTAGTGAGTGAGTaGGGAACTGTAGGAAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: TEPLERWVVSELGTVGSSWVVSE*GTVGSS Trigger: GCTGCTTCCTACAGTTCCCAACTCACTCACTACCCA...GCTGCTTCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAGTGGCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108988.9 ENSMUST00000134729.2 ENSMUST00000144458.8 |
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| 3UTR TCA 72 bp | AGGGTAATAAAGTTACAATCACCCACCTCTGCAGCCTaGCGTCTACCCACATGTCTGACCCGCGGTGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: RVIKLQSPTSAA*RLPTCLTRGVY Trigger: GTAGACACCGCGGGTCAGACATGTGGGTAGACGTCAGGCTGCAGAGGTGGGTGATTGTAACTTTATTACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR GCA 72 bp | TCTTTTCAGGGTAATAAAGTTACAATCACCCACCTCTaGAGCCTGACGTCTACCCACATGTCTGACCCGCGG | + |
|
Preference number: 3 (lower is better) Translates to: SFQGNKVTITHL*SLTSTHMSDPR Trigger: CCGCGGGTCAGACATGTGGGTAGACGTCAGGCTGCAGAGGTGGGTGATTGTAACTTTATTACCCTGAAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| 3UTR-3UTR CAA 90 bp | GTCTACGTCAGCGGTTTCCCTCTCGTAATCGTTAAAATGTGTTTCCTATTAGGATGGGTAGTGAGTGAGTaGGGAACTGTAGGAAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: VYVSGFPLVIVKMCFLLGWVVSE*GTVGSS Trigger: GCTGCTTCCTACAGTTCCCAACTCACTCACTACCCA...TCCTAATAGGAAACACATTTTAACGATTACGAGAGGGAAACCGCTGACGTAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR TCA 90 bp | GACACGGTGCGAGCCGCCTCCTCCGCCCGGGAACCAGCGGTTCTTCAGAAGCGGAGGTGGCATGGCCGTTaGCCAGGGTGGCTGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DTVRAASSAREPAVLQKRRWHGR*PGWLGK Trigger: CTTCCCCAGCCACCCTGGTCAACGGCCATGCCACCT...CCGCTTCTGAAGAACCGCTGGTTCCCGGGCGGAGGAGGCGGCTCGCACCGTGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR TCA 90 bp | GACACGGTGCGAGCCGCCTCCTCCGCCCGGGAACCAGCGGTTCTTCAGAAGCGGACTTTCGGCAGGAGGTaGCTGGCTCTCCGGCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DTVRAASSAREPAVLQKRTFGRR*LALRLR Trigger: GCGAAGCCGGAGAGCCAGTCACCTCCTGCCGAAAGT...CCGCTTCTGAAGAACCGCTGGTTCCCGGGCGGAGGAGGCGGCTCGCACCGTGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR TCA 90 bp | GACACGGTGCGAGCCGCCTCCTCCGCCCGGGAACCAGCGGTTCTTCAGAAGCGGCACAAGTCCTGGGCATaGCTGGAGGAAGCACGTCCA | + |
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Preference number: 4 (lower is better) Translates to: DTVRAASSAREPAVLQKRHKSWA*LEEARP Trigger: TGGACGTGCTTCCTCCAGTCATGCCCAGGACTTGTG...CCGCTTCTGAAGAACCGCTGGTTCCCGGGCGGAGGAGGCGGCTCGCACCGTGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR TCA 90 bp | GATCAGACTGGGACACGGTGCGAGCCGCCTCCTCCGCCCGGGAACCAGCGGTTCCACATACGCCATGGGTaGGGAGGCAGAGGGCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DQTGTRCEPPPPPGNQRFHIRHG*GGRGLR Trigger: TCTAAGCCCTCTGCCTCCTCACCCATGGCGTATGTG...GAACCGCTGGTTCCCGGGCGGAGGAGGCGGCTCGCACCGTGTCCCAGTCTGATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR TCA 90 bp | TGCGCTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCACGGGCGCAGAGGGACACATACGCCATGGGTaGGGAGGCAGAGGGCTTAGA | + |
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Preference number: 4 (lower is better) Translates to: CAVRALRHLPSKPTGAEGHIRHG*GGRGLR Trigger: TCTAAGCCCTCTGCCTCCTCACCCATGGCGTATGTG...TCCCTCTGCGCCCGTGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR GCA 90 bp | GATCAGACTGGGACACGGTGCGAGCCGCCTCCTCCGCCCGGGAACCAGCGGTTCGCAGGGAGGCAGGGCTaGTCAAAGTCAGCTTCATGG | + |
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Preference number: 4 (lower is better) Translates to: DQTGTRCEPPPPPGNQRFAGRQG*SKSASW Trigger: CCATGAAGCTGACTTTGAGCAGCCCTGCCTCCCTGC...GAACCGCTGGTTCCCGGGCGGAGGAGGCGGCTCGCACCGTGTCCCAGTCTGATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR GCA 90 bp | CTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCACGGGCGCAGAGGGAGTCTTGGACGAAGTCCGCCTaGCGGGTGATGGACGTCTTA | + |
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Preference number: 4 (lower is better) Translates to: LCGPSGTFHPSPRAQRESWTKSA*RVMDVL Trigger: TAAGACGTCCATCACCCGGCAGGCGGACTTCGTCCA...AGACTCCCTCTGCGCCCGTGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR TCA 90 bp | TCAGTCAGCACGAGCTGCGCTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCCACAAGTCCTGGGCATaGCTGGAGGAAGCACGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SVSTSCAVRALRHLPSKPHKSWA*LEEARP Trigger: TGGACGTGCTTCCTCCAGTCATGCCCAGGACTTGTG...GGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCAGCTCGTGCTGACTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR CCA 90 bp | TGCGCTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCACGGGCGCAGAGGGACTCCTGTCCTGCATCTaGCAGTTCATCTTCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: CAVRALRHLPSKPTGAEGLLSCI*QFIFSL Trigger: CAGGCTGAAGATGAACTGCCAGATGCAGGACAGGAG...TCCCTCTGCGCCCGTGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144458.8 |
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| CDS-3UTR GCA 90 bp | CAGTCAGCACGAGCTGCGCTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCATCTCCAGAGTCACTCTaGGGCTCACCTCAACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QSARAALCGPSGTFHPSPSPESL*GSPQPP Trigger: AGGAGGTTGAGGTGAGCCGCAGAGTGACTCTGGAGA...TGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCAGCTCGTGCTGACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR GCA 90 bp | CAGTCAGCACGAGCTGCGCTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCAAACTCGATCCTCTGGTaGTCCTGTCCTGCATCTGGC | + |
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Preference number: 4 (lower is better) Translates to: QSARAALCGPSGTFHPSPNSILW*SCPASG Trigger: GCCAGATGCAGGACAGGAGCACCAGAGGATCGAGTT...TGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCAGCTCGTGCTGACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144458.8 |
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| CDS-3UTR CCA 90 bp | CTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCACGGGCGCAGAGGGAGTCTAGTCCTGGGCATGACTaGAGGAAGCACGTCCATGAA | + |
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Preference number: 4 (lower is better) Translates to: LCGPSGTFHPSPRAQRESSPGHD*RKHVHE Trigger: TTCATGGACGTGCTTCCTCCAGTCATGCCCAGGACT...AGACTCCCTCTGCGCCCGTGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR CCA 90 bp | GACACGGTGCGAGCCGCCTCCTCCGCCCGGGAACCAGCGGTTCTTCAGAAGCGGCGTATCTTGTCAGACTaGATGTCCAACTGCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: DTVRAASSAREPAVLQKRRILSD*MSNCSV Trigger: CACGCTGCAGTTGGACATCCAGTCTGACAAGATACG...CCGCTTCTGAAGAACCGCTGGTTCCCGGGCGGAGGAGGCGGCTCGCACCGTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR TCA 90 bp | TCAGCACGAGCTGCGCTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCACGGACCAGTTTCCTTTATTaGTCAGCCCACGGGGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: SARAALCGPSGTFHPSPRTSFLY*SAHGVA Trigger: TGCAACCCCGTGGGCTGATCAATAAAGGAAACTGGT...CCGTGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCAGCTCGTGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR GCA 90 bp | TCAGTCAGCACGAGCTGCGCTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCCTGGTGCTCCTGTCCTaGATCTGGCAGTTCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: SVSTSCAVRALRHLPSKPLVLLS*IWQFIF Trigger: GAAGATGAACTGCCAGATGCAGGACAGGAGCACCAG...GGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCAGCTCGTGCTGACTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144458.8 |
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| CDS-3UTR CCA 90 bp | TCAGAAGCGGCGGCTCTCGTGTGCCCTCACCCAGGCAACAGTCCAGCTTCTGAAACAGCCCTGCAGTCCTaGCATCGCCTCCTAGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SEAAALVCPHPGNSPASETALQS*HRLLVS Trigger: GGACACTAGGAGGCGATGCCAGGACTGCAGGGCTGT...TTCAGAAGCTGGACTGTTGCCTGGGTGAGGGCACACGAGAGCCGCCGCTTCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR CCA 90 bp | GTGAGTGAGTTGGGAACTGTAGGAAGCAGCGTCAGGCACACACGGGCACACGGGACAGCCCTGCAGTCCTaGCATCGCCTCCTAGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: VSELGTVGSSVRHTRAHGTALQS*HRLLVS Trigger: GGACACTAGGAGGCGATGCCAGGACTGCAGGGCTGT...CCCGTGTGCCCGTGTGTGCCTGACGCTGCTTCCTACAGTTCCCAACTCACTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR CCA 90 bp | CGGTGCGAGCCGCCTCCTCCGCCCGGGAACCAGCGGTTCTTCAGAAGCGGCGGCACTCTGCAATCTTTATaGCTACAGGATCCTCTGACA | + |
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Preference number: 4 (lower is better) Translates to: RCEPPPPPGNQRFFRSGGTLQSL*LQDPLT Trigger: TGTCAGAGGATCCTGTAGCCATAAAGATTGCAGAGT...GCCGCCGCTTCTGAAGAACCGCTGGTTCCCGGGCGGAGGAGGCGGCTCGCACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR CCA 90 bp | GATCAGACTGGGACACGGTGCGAGCCGCCTCCTCCGCCCGGGAACCAGCGGTTCGGGTTTGGGAGGCACTaGCATGTTAGTGAACTCATT | + |
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Preference number: 4 (lower is better) Translates to: DQTGTRCEPPPPPGNQRFGFGRH*HVSELI Trigger: AATGAGTTCACTAACATGCCAGTGCCTCCCAAACCC...GAACCGCTGGTTCCCGGGCGGAGGAGGCGGCTCGCACCGTGTCCCAGTCTGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR CCA 90 bp | CTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCACGGGCGCAGAGGGAGTCTCGTATCTTGTCAGACTaGATGTCCAACTGCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: LCGPSGTFHPSPRAQRESRILSD*MSNCSV Trigger: CACGCTGCAGTTGGACATCCAGTCTGACAAGATACG...AGACTCCCTCTGCGCCCGTGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR GCA 90 bp | CTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCACGGGCGCAGAGGGAGTCTACAGAGTGTTTTTCGTaGGTGGGTGAGAGTAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LCGPSGTFHPSPRAQRESTECFS*VGESSF Trigger: GAAGCTACTCTCACCCACGCACGAAAAACACTCTGT...AGACTCCCTCTGCGCCCGTGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR CCA 90 bp | TCAGCACGAGCTGCGCTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCACGGCCTGCTTGGTTTTGGTaGTGTAACCTTGGACAGACT | + |
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Preference number: 4 (lower is better) Translates to: SARAALCGPSGTFHPSPRPAWFW*CNLGQT Trigger: AGTCTGTCCAAGGTTACACCACCAAAACCAAGCAGG...CCGTGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCAGCTCGTGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR GCA 90 bp | CAGAAGCGGCGGCTCTCGTGTGCCCTCACCCAGGCAACAGTCCAGCTTCTGAAGACTAGCCCAGGACTTTaGAGGCTGGCTAATGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: QKRRLSCALTQATVQLLKTSPGL*RLANGD Trigger: ATCCCCATTAGCCAGCCTGCAAAGTCCTGGGCTAGT...CTTCAGAAGCTGGACTGTTGCCTGGGTGAGGGCACACGAGAGCCGCCGCTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR GCA 90 bp | CAGTCAGCACGAGCTGCGCTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCAACAGAGTGTTTTTCGTaGGTGGGTGAGAGTAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: QSARAALCGPSGTFHPSPTECFS*VGESSF Trigger: GAAGCTACTCTCACCCACGCACGAAAAACACTCTGT...TGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCAGCTCGTGCTGACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR GCA 90 bp | TCAGAAGCGGCGGCTCTCGTGTGCCCTCACCCAGGCAACAGTCCAGCTTCTGAATCTCCAGAGTCACTCTaGGGCTCACCTCAACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SEAAALVCPHPGNSPASESPESL*GSPQPP Trigger: AGGAGGTTGAGGTGAGCCGCAGAGTGACTCTGGAGA...TTCAGAAGCTGGACTGTTGCCTGGGTGAGGGCACACGAGAGCCGCCGCTTCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR CCA 90 bp | TCAGTCAGCACGAGCTGCGCTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCGTCTGTATATGTATGTaGGTTCAAAGGCAGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSTSCAVRALRHLPSKPVCICM*VQRQPL Trigger: CAGGGGCTGCCTTTGAACCCACATACATATACAGAC...GGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCAGCTCGTGCTGACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCTACAGAGCCACTAGAGAGGTGGGTAGTGAGTGAGTTGGGAACTGTAGGAAGGTGGCATGGCCGTTaGCCAGGGTGGCTGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSTEPLERWVVSELGTVGRWHGR*PGWLGK Trigger: CTTCCCCAGCCACCCTGGTCAACGGCCATGCCACCT...TCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAGTGGCTCTGTAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCGGCGGCTCTCGTGTGCCCTCACCCAGGCAACAGTCCAGCTTCTGAAGATCAGCCCACGGGGTTaGAATGACACTGGCTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: QKRRLSCALTQATVQLLKISPRG*NDTGLC Trigger: ACATAAGCCAGTGTCATTGCAACCCCGTGGGCTGAT...CTTCAGAAGCTGGACTGTTGCCTGGGTGAGGGCACACGAGAGCCGCCGCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CCA 90 bp | GGGACACGGCATCAGAGAGGCGTGGCGGGAGATTACACAGCAGACACTGGGAATTTTCCACATACGCCATaGGTGAGGAGGCAGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTRHQRGVAGDYTADTGNFPHTP*VRRQRA Trigger: AGCCCTCTGCCTCCTCACCCATGGCGTATGTGGAAA...ATTCCCAGTGTCTGCTGTGTAATCTCCCGCCACGCCTCTCTGATGCCGTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCTACAGAGCCACTAGAGAGGTGGGTAGTGAGTGAGTTGGGAACTGTAGGAACTTTCGGCAGGAGGTaGCTGGCTCTCCGGCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSTEPLERWVVSELGTVGTFGRR*LALRLR Trigger: GCGAAGCCGGAGAGCCAGTCACCTCCTGCCGAAAGT...TCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAGTGGCTCTGTAGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAAGCGGCGGCTCTCGTGTGCCCTCACCCAGGCAACAGTCCAGCTTCTGAAACCAGTTTCCTTTATTaGTCAGCCCACGGGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEAAALVCPHPGNSPASETSFLY*SAHGVA Trigger: TGCAACCCCGTGGGCTGATCAATAAAGGAAACTGGT...TTCAGAAGCTGGACTGTTGCCTGGGTGAGGGCACACGAGAGCCGCCGCTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGCACGAGCTGCGCTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCACTCAGCATCTCTTCATaGAGTCCATTGAGGATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSARAALCGPSGTFHPSPLSISS*SPLRMK Trigger: TTTCATCCTCAATGGACTCCATGAAGAGATGCTGAG...TGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCAGCTCGTGCTGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTCAGCACGAGCTGCGCTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCCTCAGCATCTCTTCATaGAGTCCATTGAGGATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVSTSCAVRALRHLPSKPLSISS*SPLRMK Trigger: TTTCATCCTCAATGGACTCCATGAAGAGATGCTGAG...GGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCAGCTCGTGCTGACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTGGGAACTGTAGGAAGCAGCGTCAGGCACACACGGGCACACGGGCACGGTCCTGCTTGGTTTTGGTaGTGTAACCTTGGACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: ELGTVGSSVRHTRAHGHGPAWFW*CNLGQT Trigger: AGTCTGTCCAAGGTTACACCACCAAAACCAAGCAGG...ACCGTGCCCGTGTGCCCGTGTGTGCCTGACGCTGCTTCCTACAGTTCCCAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134729.2 |
||
| CDS-3UTR GCA 90 bp | GGGACACGGCATCAGAGAGGCGTGGCGGGAGATTACACAGCAGACACTGGGAATATCAGCCCACGGGGTTaGAATGACACTGGCTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: GTRHQRGVAGDYTADTGNISPRG*NDTGLC Trigger: ACATAAGCCAGTGTCATTGCAACCCCGTGGGCTGAT...ATTCCCAGTGTCTGCTGTGTAATCTCCCGCCACGCCTCTCTGATGCCGTGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGCGGCGGCTCTCGTGTGCCCTCACCCAGGCAACAGTCCAGCTTCTGAAGTCTGTATATGTATGTaGGTTCAAAGGCAGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEAAALVCPHPGNSPASEVCICM*VQRQPL Trigger: CAGGGGCTGCCTTTGAACCCACATACATATACAGAC...TTCAGAAGCTGGACTGTTGCCTGGGTGAGGGCACACGAGAGCCGCCGCTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTTCAGAAGCGGCGGCTCTCGTGTGCCCTCACCCAGGCAACAGTCCAGCTTCTATCAAGTCGCTTCTaGGCCCATTGGAAACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLQKRRLSCALTQATVQLLSSRF*AHWKQS Trigger: ACTCTGTTTCCAATGGGCCCAGAAGCGACTTGATAG...AAGCTGGACTGTTGCCTGGGTGAGGGCACACGAGAGCCGCCGCTTCTGAAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTTCAGAAGCGGCGGCTCTCGTGTGCCCTCACCCAGGCAACAGTCCAGCTTTTCTTGACCAGCTTCTaGCATCCACCTGTCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLQKRRLSCALTQATVQLFLTSF*HPPVFS Trigger: TGAGAAGACAGGTGGATGCCAGAAGCTGGTCAAGAA...AAGCTGGACTGTTGCCTGGGTGAGGGCACACGAGAGCCGCCGCTTCTGAAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGCAGCGTCAGGCACACACGGGCACACGGGCACGGTTACAGCAGGTCCACAGTAGTTCTCCTGCTTaGTTTTGGTGGTGTAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKQRQAHTGTRARLQQVHSSSPA*FWWCNL Trigger: AAGGTTACACCACCAAAACCAAGCAGGAGAACTACT...GTGGACCTGCTGTAACCGTGCCCGTGTGCCCGTGTGTGCCTGACGCTGCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134729.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCTACAGAGCCACTAGAGAGGTGGGTAGTGAGTGAGTTGGGAACTGTAGGAGCAGGGAGGCAGGGCTaGTCAAAGTCAGCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTEPLERWVVSELGTVGAGRQG*SKSASW Trigger: CCATGAAGCTGACTTTGAGCAGCCCTGCCTCCCTGC...TCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAGTGGCTCTGTAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR GCA 90 bp | TCTACAGAGCCACTAGAGAGGTGGGTAGTGAGTGAGTTGGGAACTGTAGGAAGCTGGACGAAGTCCGCCTaGCGGGTGATGGACGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: STEPLERWVVSELGTVGSWTKSA*RVMDVL Trigger: TAAGACGTCCATCACCCGGCAGGCGGACTTCGTCCA...GCTTCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAGTGGCTCTGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAGCCACTAGAGAGGTGGGTAGTGAGTGAGTTGGGAACTGTAGGAAGCAGCCAGGGTCTCAGCCTCTaGGTTAGAGTTGCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TEPLERWVVSELGTVGSSQGLSL*VRVAFQ Trigger: CTGGAAAGCAACTCTAACGCAGAGGCTGAGACCCTG...GCTGCTTCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAGTGGCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR TCA 90 bp | TCTACAGAGCCACTAGAGAGGTGGGTAGTGAGTGAGTTGGGAACTGTAGGAAGCAAGTCCACAGGATTCTaGGGGCTGTCACAAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: STEPLERWVVSELGTVGSKSTGF*GLSQVL Trigger: CAGGACTTGTGACAGCCCTCAGAATCCTGTGGACTT...GCTTCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAGTGGCTCTGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGCGTGGCGGGAGATTACACAGCAGACACTGGGAATTGTCAGTCCATCATTAACTCGATCCTCTGGTaGTCCTGTCCATCTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGVAGDYTADTGNCQSIINSILW*SCPSGS Trigger: ACTGCCAGATGGACAGGAGCACCAGAGGATCGAGTT...AATGATGGACTGACAATTCCCAGTGTCTGCTGTGTAATCTCCCGCCACGCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108988.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCTACAGAGCCACTAGAGAGGTGGGTAGTGAGTGAGTTGGGAACTGTAGGACAGGGTCTCAGCCTCTaGGTTAGAGTTGCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSTEPLERWVVSELGTVGQGLSL*VRVAFQ Trigger: CTGGAAAGCAACTCTAACGCAGAGGCTGAGACCCTG...TCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAGTGGCTCTGTAGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAGCCACTAGAGAGGTGGGTAGTGAGTGAGTTGGGAACTGTAGGAAGCAGCGGGTTTGGGAGGCACTaGCATGTTAGTGAACTCATT | + |
|
Preference number: 4 (lower is better) Translates to: TEPLERWVVSELGTVGSSGFGRH*HVSELI Trigger: AATGAGTTCACTAACATGCCAGTGCCTCCCAAACCC...GCTGCTTCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAGTGGCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| 3UTR CAA 72 bp | AGGCGTGGCGGGAGATTACACAGCAGACACTGGGAATaGTCAGTCCATCATTGTGCCCACTGTTCATGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RRGGRLHSRHWE*SVHHCAHCSCV Trigger: TACACATGAACAGTGGGCACAATGATGGACTGACAATTCCCAGTGTCTGCTGTGTAATCTCCCGCCACGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CCA 90 bp | CTAGAGAGGTGGGTAGTGAGTGAGTTGGGAACTGTAGGAAGCAGCGTCAGGCACACTCTGCAATCTTTATaGCTACAGGATCCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LERWVVSELGTVGSSVRHTLQSL*LQDPLT Trigger: TGTCAGAGGATCCTGTAGCCATAAAGATTGCAGAGT...GTGCCTGACGCTGCTTCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGCGTGGCGGGAGATTACACAGCAGACACTGGGAATTGTCAGTCCATCATTCTATCAAGTCGCTTCTaGGCCCATTGGAAACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGVAGDYTADTGNCQSIILSSRF*AHWKQS Trigger: ACTCTGTTTCCAATGGGCCCAGAAGCGACTTGATAG...AATGATGGACTGACAATTCCCAGTGTCTGCTGTGTAATCTCCCGCCACGCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR GCA 90 bp | GTCTACGTCAGCGGTTTCCCTCTCGTAATCGTTAAAATGTGTTTCCTATTAGGAATAGGAGGTAGGCTGTaGGGTCGGCAGGCGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VYVSGFPLVIVKMCFLLGIGGRL*GRQAVS Trigger: TGAAACCGCCTGCCGACCGCACAGCCTACCTCCTAT...TCCTAATAGGAAACACATTTTAACGATTACGAGAGGGAAACCGCTGACGTAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR GCA 90 bp | CCATCATTGTGCCCACTGTTCATGTGTACACAGCATGAATGTGATTTGAAATCTATAGGAGGTAGGCTGTaGGGTCGGCAGGCGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLCPLFMCTQHECDLKSIGGRL*GRQAVS Trigger: TGAAACCGCCTGCCGACCGCACAGCCTACCTCCTAT...AGATTTCAAATCACATTCATGCTGTGTACACATGAACAGTGGGCACAATGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CCA 90 bp | GTCTACGTCAGCGGTTTCCCTCTCGTAATCGTTAAAATGTGTTTCCTATTAGGAAGTCCTGGGCATGACTaGAGGAAGCACGTCCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VYVSGFPLVIVKMCFLLGSPGHD*RKHVHE Trigger: TTCATGGACGTGCTTCCTCCAGTCATGCCCAGGACT...TCCTAATAGGAAACACATTTTAACGATTACGAGAGGGAAACCGCTGACGTAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR GCA 90 bp | CCATCATTGTGCCCACTGTTCATGTGTACACAGCATGAATGTGATTTGAAATCTACTAGCCCAGGACTTTaGAGGCTGGCTAATGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSLCPLFMCTQHECDLKSTSPGL*RLANGD Trigger: ATCCCCATTAGCCAGCCTGCAAAGTCCTGGGCTAGT...AGATTTCAAATCACATTCATGCTGTGTACACATGAACAGTGGGCACAATGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CCA 90 bp | GTCTACGTCAGCGGTTTCCCTCTCGTAATCGTTAAAATGTGTTTCCTATTAGGACCTGCTTGGTTTTGGTaGTGTAACCTTGGACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VYVSGFPLVIVKMCFLLGPAWFW*CNLGQT Trigger: AGTCTGTCCAAGGTTACACCACCAAAACCAAGCAGG...TCCTAATAGGAAACACATTTTAACGATTACGAGAGGGAAACCGCTGACGTAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| 3UTR CAA 72 bp | ATTACACAGCAGACACTGGGAATTGTCAGTCCATCATaGTGCCCACTGTTCATGTGTACACAGCATGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ITQQTLGIVSPS*CPLFMCTQHEC Trigger: ACATTCATGCTGTGTACACATGAACAGTGGGCACAATGATGGACTGACAATTCCCAGTGTCTGCTGTGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCACGGGCGCAGAGGGAGTCTGAGGTGGCATGGCCGTaGACCAGGGTGGCTGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LCGPSGTFHPSPRAQRESEVAWP*TRVAGE Trigger: TTCCCCAGCCACCCTGGTCAACGGCCATGCCACCTC...AGACTCCCTCTGCGCCCGTGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CAA 90 bp | TCAGACTGGGACACGGTGCGAGCCGCCTCCTCCGCCCGGGAACCAGCGGTTCTTGAGGTGGCATGGCCGTaGACCAGGGTGGCTGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SDWDTVRAASSAREPAVLEVAWP*TRVAGE Trigger: TTCCCCAGCCACCCTGGTCAACGGCCATGCCACCTC...AAGAACCGCTGGTTCCCGGGCGGAGGAGGCGGCTCGCACCGTGTCCCAGTCTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CAA 90 bp | TCAGACTGGGACACGGTGCGAGCCGCCTCCTCCGCCCGGGAACCAGCGGTTCTTTGCAGTTCTGCCCCGTaGGCAGCAGTGTCCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SDWDTVRAASSAREPAVLCSSAP*AAVSSP Trigger: GGGCGAGGACACTGCTGCCAACGGGGCAGAACTGCA...AAGAACCGCTGGTTCCCGGGCGGAGGAGGCGGCTCGCACCGTGTCCCAGTCTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS TCA 90 bp | CCTCCACAGCCTCGCCGCTCGTGCCCACTGAGGTGGCATGGCCGTTaGCCAGGGTGGCTGGGGAAGCACTGTCCTCACCGCCATCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PPQPRRSCPLRWHGR*PGWLGKHCPHRHLS Trigger: TGAAAGATGGCGGTGAGGACAGTGCTTCCCCAGCCACCCTGGTCAACGGCCATGCCACCTCAGTGGGCACGAGCGGCGAGGCTGTGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAGCGGCGGCTCTCGTGTGCCCTCACCCAGGCAACAGTCCAGCTTCTGAAGTGCAGTTCTGCCCCGTaGGCAGCAGTGTCCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QKRRLSCALTQATVQLLKCSSAP*AAVSSP Trigger: GGGCGAGGACACTGCTGCCAACGGGGCAGAACTGCA...CTTCAGAAGCTGGACTGTTGCCTGGGTGAGGGCACACGAGAGCCGCCGCTTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CAA 90 bp | GCACGAGCTGCGCTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCACGGGCGTCGCTTCTGGGCCCATaGGAAACAGAGTGTTTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ARAALCGPSGTFHPSPRASLLGP*ETECFS Trigger: CGAAAAACACTCTGTTTCCAATGGGCCCAGAAGCGA...CGCCCGTGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCAGCTCGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS GCA 90 bp | CGGCTTCGCAGGGTCCAGGTCTGCACCCTCGTCGGTGTGCAGTTCTaGCCCGTTGGCAGCAGTGTCCTCGCCCGGGGATTCAAGTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: RLRRVQVCTLVGVQF*PVGSSVLARGFKYF Trigger: AAAATACTTGAATCCCCGGGCGAGGACACTGCTGCCAACGGGGCAGAACTGCACACCGACGAGGGTGCAGACCTGGACCCTGCGAAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS GCA 90 bp | AAGTCCGCCTGCCGGGTGATGGACGTCTTATTCTTGGGACCCACTTaGTCCCACTCGTCCTCGCTGCCCTTGCCCGTGTCTTCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSACRVMDVLFLGPT*SHSSSLPLPVSSSS Trigger: GGAGCTGGAAGACACGGGCAAGGGCAGCGAGGACGAGTGGGAGCAAGTGGGTCCCAAGAATAAGACGTCCATCACCCGGCAGGCGGACTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS CCA 90 bp | AGCAGGCTGTCTGCAGGGAGGCAGGGCTGCTCAAAGTCAGCTTCATaGCAGCCCTCACACAGCCCTGCAGTCCTGGCATCGCCTCCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SRLSAGRQGCSKSAS*QPSHSPAVLASPPS Trigger: ACTAGGAGGCGATGCCAGGACTGCAGGGCTGTGTGAGGGCTGCCATGAAGCTGACTTTGAGCAGCCCTGCCTCCCTGCAGACAGCCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGCGGGCCCTCAGGCACCTTCCATCCAAGCCCACGGGCGCAGAGGGAGTCTTATCTATCATGGGCGTaGATGTGCAAGGCCGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LCGPSGTFHPSPRAQRESYLSWA*MCKAAA Trigger: TGCAGCGGCCTTGCACATCAACGCCCATGATAGATA...AGACTCCCTCTGCGCCCGTGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CAA 90 bp | GACACGGTGCGAGCCGCCTCCTCCGCCCGGGAACCAGCGGTTCTTCAGAAGCGGTCGCTTCTGGGCCCATaGGAAACAGAGTGTTTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: DTVRAASSAREPAVLQKRSLLGP*ETECFS Trigger: CGAAAAACACTCTGTTTCCAATGGGCCCAGAAGCGA...CCGCTTCTGAAGAACCGCTGGTTCCCGGGCGGAGGAGGCGGCTCGCACCGTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAGCGGCGGCTCTCGTGTGCCCTCACCCAGGCAACAGTCCAGCTTCTGAAGAGAGCTTGGCGGGGTTaGGGAGGCACTGGCATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: QKRRLSCALTQATVQLLKRAWRG*GGTGML Trigger: TAACATGCCAGTGCCTCCCAAACCCCGCCAAGCTCT...CTTCAGAAGCTGGACTGTTGCCTGGGTGAGGGCACACGAGAGCCGCCGCTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGGAAGCAGCGTCAGGCACACACGGGCACACGGGCACGGTTACAGCAGGTCTTTGGTGGTGTAACCTaGGACAGACTCCCTGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CRKQRQAHTGTRARLQQVFGGVT*DRLPGH Trigger: GTGGCCAGGGAGTCTGTCCAAGGTTACACCACCAAA...GACCTGCTGTAACCGTGCCCGTGTGCCCGTGTGTGCCTGACGCTGCTTCCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134729.2 |
||
| CDS GCA 90 bp | TGGACGTCTTATTCTTGGGACCCACTTGCTCCCACTCGTCCTCGCTaGCCTTGCCCGTGTCTTCCAGCTCCTCGTCCTCTATCAAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: WTSYSWDPLAPTRPR*PCPCLPAPRPLSSR Trigger: GCGACTTGATAGAGGACGAGGAGCTGGAAGACACGGGCAAGGGCAGCGAGGACGAGTGGGAGCAAGTGGGTCCCAAGAATAAGACGTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS GCA 90 bp | TCTTATTCTTGGGACCCACTTGCTCCCACTCGTCCTCGCTGCCCTTaGCCGTGTCTTCCAGCTCCTCGTCCTCTATCAAGTCGCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SYSWDPLAPTRPRCP*PCLPAPRPLSSRFW Trigger: CCAGAAGCGACTTGATAGAGGACGAGGAGCTGGAAGACACGGGCAAGGGCAGCGAGGACGAGTGGGAGCAAGTGGGTCCCAAGAATAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR CAA 90 bp | TCAGAAGCGGCGGCTCTCGTGTGCCCTCACCCAGGCAACAGTCCAGCTTCTGAATATCTATCATGGGCGTaGATGTGCAAGGCCGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SEAAALVCPHPGNSPASEYLSWA*MCKAAA Trigger: TGCAGCGGCCTTGCACATCAACGCCCATGATAGATA...TTCAGAAGCTGGACTGTTGCCTGGGTGAGGGCACACGAGAGCCGCCGCTTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR CAA 90 bp | CTAGAGAGGTGGGTAGTGAGTGAGTTGGGAACTGTAGGAAGCAGCGTCAGGCACAGAGCTTGGCGGGGTTaGGGAGGCACTGGCATGTTA | + |
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Preference number: 5 (lower is better) Translates to: LERWVVSELGTVGSSVRHRAWRG*GGTGML Trigger: TAACATGCCAGTGCCTCCCAAACCCCGCCAAGCTCT...GTGCCTGACGCTGCTTCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS CCA 90 bp | CCTTGCCCGTGTCTTCCAGCTCCTCGTCCTCTATCAAGTCGCTTCTaGGCCCATTGGAAACAGAGTGTTTTTCGTGCGTGGGTGAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: PCPCLPAPRPLSSRF*AHWKQSVFRAWVRV Trigger: TACTCTCACCCACGCACGAAAAACACTCTGTTTCCAATGGGCCCAGAAGCGACTTGATAGAGGACGAGGAGCTGGAAGACACGGGCAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR CAA 90 bp | ACAGAGCCACTAGAGAGGTGGGTAGTGAGTGAGTTGGGAACTGTAGGAAGCAGCTTTGGTGGTGTAACCTaGGACAGACTCCCTGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: TEPLERWVVSELGTVGSSFGGVT*DRLPGH Trigger: GTGGCCAGGGAGTCTGTCCAAGGTTACACCACCAAA...GCTGCTTCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAGTGGCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108988.9 ENSMUST00000134729.2 ENSMUST00000144458.8 |
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| CDS GCA 90 bp | TCCTCTGGTGCTCCTGTCCATCTGGCAGTTCATCTTCAGCCTGTATaGTACACAGAGTCCCACTGTATGGAGGGAGCTCAACAGAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: SSGAPVHLAVHLQPV*YTESHCMEGAQQKS Trigger: GCTCTTCTGTTGAGCTCCCTCCATACAGTGGGACTCTGTGTAGCATACAGGCTGAAGATGAACTGCCAGATGGACAGGAGCACCAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108988.9 |
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| CDS-3UTR CAA 90 bp | ACAGAGCCACTAGAGAGGTGGGTAGTGAGTGAGTTGGGAACTGTAGGAAGCAGCCACCAGTTTCCTTTATaGATCAGCCCACGGGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: TEPLERWVVSELGTVGSSHQFPL*ISPRGC Trigger: GCAACCCCGTGGGCTGATCAATAAAGGAAACTGGTG...GCTGCTTCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAGTGGCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS-3UTR CAA 90 bp | TCTACAGAGCCACTAGAGAGGTGGGTAGTGAGTGAGTTGGGAACTGTAGGAAGCTTTGGTGGTGTAACCTaGGACAGACTCCCTGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: STEPLERWVVSELGTVGSFGGVT*DRLPGH Trigger: GTGGCCAGGGAGTCTGTCCAAGGTTACACCACCAAA...GCTTCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAGTGGCTCTGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108988.9 ENSMUST00000134729.2 ENSMUST00000144458.8 |
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| CDS GCA 90 bp | TCTATCAAGTCGCTTCTGGGCCCATTGGAAACAGAGTGTTTTTCGTaGGTGGGTGAGAGTAGCTTCTTCAGGCTCAGCATCTCTTCATGG | + |
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Preference number: 5 (lower is better) Translates to: SIKSLLGPLETECFS*VGESSFFRLSISSW Trigger: CCATGAAGAGATGCTGAGCCTGAAGAAGCTACTCTCACCCACGCACGAAAAACACTCTGTTTCCAATGGGCCCAGAAGCGACTTGATAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS CAA 90 bp | TCCTCCACAGCCTCGCCGCTCGTGCCCACTGAGGTGGCATGGCCGTaGACCAGGGTGGCTGGGGAAGCACTGTCCTCACCGCCATCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SSTASPLVPTEVAWP*TRVAGEALSSPPSF Trigger: GAAAGATGGCGGTGAGGACAGTGCTTCCCCAGCCACCCTGGTCAACGGCCATGCCACCTCAGTGGGCACGAGCGGCGAGGCTGTGGAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS CAA 72 bp | ACGAAGTCCGCCTGCCGGGTGATGGACGTCTTATTCTaGGGACCCACTTGCTCCCACTCGTCCTCGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: TKSACRVMDVLF*GPTCSHSSSLP Trigger: GGGCAGCGAGGACGAGTGGGAGCAAGTGGGTCCCAAGAATAAGACGTCCATCACCCGGCAGGCGGACTTCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS CAA 90 bp | CCGGCACCACTGTCGTTCTCCAGGGTCTCAGCCTCTGCGTTAGAGTaGCTTTCCAGAGCCAAGGCCGAGGCGGGGTACTGGTCAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: PAPLSFSRVSASALE*LSRAKAEAGYWSME Trigger: CTCCATTGACCAGTACCCCGCCTCGGCCTTGGCTCTGGAAAGCAACTCTAACGCAGAGGCTGAGACCCTGGAGAACGACAGTGGTGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS GCA 72 bp | TGCCGGGTGATGGACGTCTTATTCTTGGGACCCACTTaGTCCCACTCGTCCTCGCTGCCCTTGCCCGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: CRVMDVLFLGPT*SHSSSLPLPVS Trigger: AGACACGGGCAAGGGCAGCGAGGACGAGTGGGAGCAAGTGGGTCCCAAGAATAAGACGTCCATCACCCGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS CCA 72 bp | GGTCTGCACCCTCGTCGGTGTGCAGTTCTGCCCCGTTaGCAGCAGTGTCCTCGCCCGGGGATTCAAGTATTT | + |
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Preference number: 6 (lower is better) Translates to: GLHPRRCAVLPR*QQCPRPGIQVF Trigger: AAATACTTGAATCCCCGGGCGAGGACACTGCTGCCAACGGGGCAGAACTGCACACCGACGAGGGTGCAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS CAA 72 bp | CTGTCGTTCTCCAGGGTCTCAGCCTCTGCGTTAGAGTaGCTTTCCAGAGCCAAGGCCGAGGCGGGGTACTGG | + |
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Preference number: 6 (lower is better) Translates to: LSFSRVSASALE*LSRAKAEAGYW Trigger: CCAGTACCCCGCCTCGGCCTTGGCTCTGGAAAGCAACTCTAACGCAGAGGCTGAGACCCTGGAGAACGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS CAA 72 bp | AGGTCTGCACCCTCGTCGGTGTGCAGTTCTGCCCCGTaGGCAGCAGTGTCCTCGCCCGGGGATTCAAGTATT | + |
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Preference number: 6 (lower is better) Translates to: RSAPSSVCSSAP*AAVSSPGDSSI Trigger: AATACTTGAATCCCCGGGCGAGGACACTGCTGCCAACGGGGCAGAACTGCACACCGACGAGGGTGCAGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS CAA 72 bp | TTGGGACCCACTTGCTCCCACTCGTCCTCGCTGCCCTaGCCCGTGTCTTCCAGCTCCTCGTCCTCTATCAAG | + |
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Preference number: 6 (lower is better) Translates to: LGPTCSHSSSLP*PVSSSSSSSIK Trigger: CTTGATAGAGGACGAGGAGCTGGAAGACACGGGCAAGGGCAGCGAGGACGAGTGGGAGCAAGTGGGTCCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS CAA 90 bp | GTCTTATTCTTGGGACCCACTTGCTCCCACTCGTCCTCGCTGCCCTaGCCCGTGTCTTCCAGCTCCTCGTCCTCTATCAAGTCGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: VLFLGPTCSHSSSLP*PVSSSSSSSIKSLL Trigger: CAGAAGCGACTTGATAGAGGACGAGGAGCTGGAAGACACGGGCAAGGGCAGCGAGGACGAGTGGGAGCAAGTGGGTCCCAAGAATAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS GCA 72 bp | AAAATGCCAGTGATGGGCGTCTGGACGAAGTCCGCCTaGCGGGTGATGGACGTCTTATTCTTGGGACCCACT | + |
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Preference number: 6 (lower is better) Translates to: KMPVMGVWTKSA*RVMDVLFLGPT Trigger: AGTGGGTCCCAAGAATAAGACGTCCATCACCCGGCAGGCGGACTTCGTCCAGACGCCCATCACTGGCATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS GCA 72 bp | GCTCCTGTCCATCTGGCAGTTCATCTTCAGCCTGTATaGTACACAGAGTCCCACTGTATGGAGGGAGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: APVHLAVHLQPV*YTESHCMEGAQ Trigger: TTGAGCTCCCTCCATACAGTGGGACTCTGTGTAGCATACAGGCTGAAGATGAACTGCCAGATGGACAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108988.9 |
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| CDS GCA 72 bp | TCGCTTCTGGGCCCATTGGAAACAGAGTGTTTTTCGTaGGTGGGTGAGAGTAGCTTCTTCAGGCTCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: SLLGPLETECFS*VGESSFFRLSI Trigger: GATGCTGAGCCTGAAGAAGCTACTCTCACCCACGCACGAAAAACACTCTGTTTCCAATGGGCCCAGAAGCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS CCA 72 bp | TGTCTTCCAGCTCCTCGTCCTCTATCAAGTCGCTTCTaGGCCCATTGGAAACAGAGTGTTTTTCGTGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: CLPAPRPLSSRF*AHWKQSVFRAW Trigger: CCACGCACGAAAAACACTCTGTTTCCAATGGGCCCAGAAGCGACTTGATAGAGGACGAGGAGCTGGAAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS CCA 72 bp | ACCAAACTCGATCCTCTGGTGCTCCTGTCCTGCATCTaGCAGTTCATCTTCAGCCTGTATGCTACACAGAGT | + |
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Preference number: 6 (lower is better) Translates to: TKLDPLVLLSCI*QFIFSLYATQS Trigger: ACTCTGTGTAGCATACAGGCTGAAGATGAACTGCCAGATGCAGGACAGGAGCACCAGAGGATCGAGTTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144458.8 |
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| CDS CCA 72 bp | TTCTGGGCCCATTGGAAACAGAGTGTTTTTCGTGCGTaGGTGAGAGTAGCTTCTTCAGGCTCAGCATCTCTT | + |
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Preference number: 6 (lower is better) Translates to: FWAHWKQSVFRA*VRVASSGSASL Trigger: AAGAGATGCTGAGCCTGAAGAAGCTACTCTCACCCACGCACGAAAAACACTCTGTTTCCAATGGGCCCAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS CAA 72 bp | AGCTTCTTCAGGCTCAGCATCTCTTCATGGAGTCCATaGAGGATGAAACCTAGATACTCCTCTGCGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SFFRLSISSWSP*RMKPRYSSASS Trigger: GGAGGACGCAGAGGAGTATCTAGGTTTCATCCTCAATGGACTCCATGAAGAGATGCTGAGCCTGAAGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108982.11 ENSMUST00000108988.9 ENSMUST00000144458.8 |
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| CDS CCA 72 bp | GGTGAGAGTAGCTTCTTCAGGCTCAGCATCTCTTCATaGAGTCCATTGAGGATGAAACCTAGATACTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GESSFFRLSISS*SPLRMKPRYSS Trigger: AGAGGAGTATCTAGGTTTCATCCTCAATGGACTCCATGAAGAGATGCTGAGCCTGAAGAAGCTACTCTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108982.11 ENSMUST00000108988.9 ENSMUST00000144458.8 |
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