Pregenerated sensors for USO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029407Ensembl transcript IDs: ENSMUST00000031355.10, ENSMUST00000201642.2, ENSMUST00000202155.2
Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CAGCTTGTCTTTCTCGGTTTGCAGGATGGCGATGGTGCTATTGGATaGGTCCAGCTGCTTTTGAATGGCGGTCCTCTCCTCAGACAGCGC | + |
Preference number: 1 (lower is better) Translates to: QLVFLGLQDGDGAIG*VQLLLNGGPLLRQR Trigger: GCGCTGTCTGAGGAGAGGACCGCCATTCAAAAGCAGCTGGACTCATCCAATAGCACCATCGCCATCCTGCAAACCGAGAAAGACAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR TCA 90 bp | GATTGTACTGGTCCTTGTGCTGCTGAATCTGAGATGCCTGCTGGGTaGCTGCTGTCTGTAGCTGCTCGTTCTGACACTTCAGGGTGGAGA | + |
Preference number: 1 (lower is better) Translates to: DCTGPCAAESEMPAG*LLSVAARSDTSGWR Trigger: TCTCCACCCTGAAGTGTCAGAACGAGCAGCTACAGACAGCAGTCACCCAGCAGGCATCTCAGATTCAGCAGCACAAGGACCAGTACAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR TCA 90 bp | GCGCCTGCTGACTTTTTAACTCTTCTATCTCTTCCCTCAGCCGACTaGTTTCTTCCGGCTGAATGCCATTCACCTGAGCCCCGTCACCGT | + |
Preference number: 1 (lower is better) Translates to: APADFLTLLSLPSAD*FLPAECHSPEPRHR Trigger: ACGGTGACGGGGCTCAGGTGAATGGCATTCAGCCGGAAGAAATCAGTCGGCTGAGGGAAGAGATAGAAGAGTTAAAAAGTCAGCAGGCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR CCA 90 bp | AGTCCAGCTTGTCTTTCTCGGTTTGCAGGATGGCGATGGTGCTATTaGATGAGTCCAGCTGCTTTTGAATGGCGGTCCTCTCCTCAGACA | + |
Preference number: 1 (lower is better) Translates to: SPACLSRFAGWRWCY*MSPAAFEWRSSPQT Trigger: TGTCTGAGGAGAGGACCGCCATTCAAAAGCAGCTGGACTCATCCAATAGCACCATCGCCATCCTGCAAACCGAGAAAGACAAGCTGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR TCA 90 bp | GTTTGCAGGATGGCGATGGTGCTATTGGATGAGTCCAGCTGCTTTTaGATGGCGGTCCTCTCCTCAGACAGCGCTTTAATCTCATTCTTT | + |
Preference number: 1 (lower is better) Translates to: VCRMAMVLLDESSCF*MAVLSSDSALISFF Trigger: AAAGAATGAGATTAAAGCGCTGTCTGAGGAGAGGACCGCCATTCAAAAGCAGCTGGACTCATCCAATAGCACCATCGCCATCCTGCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR GCA 90 bp | AACTGGGACTTTAATGCTGTCAGTTCCTGCTTTAACTCTGCAACTTaGTCGGGATCTCTGGGAGGACATGTTGCTGAAGCCTGTTCACTC | + |
Preference number: 1 (lower is better) Translates to: NWDFNAVSSCFNSAT*SGSLGGHVAEACSL Trigger: GAGTGAACAGGCTTCAGCAACATGTCCTCCCAGAGATCCCGAGCAAGTTGCAGAGTTAAAGCAGGAACTGACAGCATTAAAGTCCCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR GCA 90 bp | GCTCGGGATCTCTGGGAGGACATGTTGCTGAAGCCTGTTCACTCATaGCAGACGCTTGCGAAGATTTCAAATTTTCAATCAATGAGTCCT | + |
Preference number: 1 (lower is better) Translates to: ARDLWEDMLLKPVHS*QTLAKISNFQSMSP Trigger: AGGACTCATTGATTGAAAATTTGAAATCTTCGCAAGCGTCTGGCATGAGTGAACAGGCTTCAGCAACATGTCCTCCCAGAGATCCCGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR CCA 90 bp | AGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATaGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTTTT | + |
Preference number: 1 (lower is better) Translates to: STEVTECLKAISEPT*QTALPPHAFKGGTF Trigger: AAAAGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR TCA 90 bp | ATCAATGAGTCCTTTTCAGCTAGCTGGCCTTGTAAGAGCGCCTGCTaGCTTTTTAACTCTTCTATCTCTTCCCTCAGCCGACTGATTTCT | + |
Preference number: 1 (lower is better) Translates to: INESFSASWPCKSAC*LFNSSISSLSRLIS Trigger: AGAAATCAGTCGGCTGAGGGAAGAGATAGAAGAGTTAAAAAGTCAGCAGGCGCTCTTACAAGGCCAGCTAGCTGAAAAGGACTCATTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR TCA 90 bp | GGTCTCCAGATTCATCTTCTTCTTCAACTGGATGACCGAGATCCTTaGGTTTACTCTTCAGTGACAGGATTTTCTGATCTTGATCTGCTA | + |
Preference number: 1 (lower is better) Translates to: GLQIHLLLQLDDRDP*VYSSVTGFSDLDLL Trigger: TAGCAGATCAAGATCAGAAAATCCTGTCACTGAAGAGTAAACTCAAGGATCTCGGTCATCCAGTTGAAGAAGAAGATGAATCTGGAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR CCA 90 bp | TTCTTTCACCAGCTTTGTAAACTCATGATCAAATATCATATACTCTaGACTCGGAAAGTTTGGCTGGGGTTTCTGAGACGCTCTGGAATA | + |
Preference number: 1 (lower is better) Translates to: FFHQLCKLMIKYHIL*TRKVWLGFLRRSGI Trigger: TATTCCAGAGCGTCTCAGAAACCCCAGCCAAACTTTCCGAGTCCAGAGTATATGATATTTGATCATGAGTTTACAAAGCTGGTGAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR-3UTR GCA 90 bp | GGCCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGATGCATTGCCACCACATaGCTTCAAAGGGGGTACTTT | + |
Preference number: 2 (lower is better) Translates to: GPAGRQALTRNCPILISGCIATT*LQRGYF Trigger: AAAGTACCCCCTTTGAAGGCATGTGGTGGCAATGCA...TCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR GCA 90 bp | CCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCATGGCAAACTGCATTaGCACCACATGCCTTCAAAG | + |
Preference number: 2 (lower is better) Translates to: PRWTASTHSELSHPDLGRHGKLH*HHMPSK Trigger: CTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATG...CCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR CCA 90 bp | CCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGATCAGTGAACCAACATaGCAAACTGCATTGCCACCA | + |
Preference number: 2 (lower is better) Translates to: PRWTASTHSELSHPDLGRISEPT*QTALPP Trigger: TGGTGGCAATGCAGTTTGCCATGTTGGTTCACTGAT...CCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR TCA 90 bp | CAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTTTTGGCTGGGGTTTCTaGGACGCTCTGGAATATAAC | + |
Preference number: 2 (lower is better) Translates to: QALTRNCPILISGGTVGVFGWGF*DALEYN Trigger: GTTATATTCCAGAGCGTCTCAGAAACCCCAGCCAAA...AACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR-3UTR GCA 90 bp | CAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTTGCATTGCCACCACATaGCTTCAAAGGGGGTACTTT | + |
Preference number: 2 (lower is better) Translates to: QALTRNCPILISGGTVGVCIATT*LQRGYF Trigger: AAAGTACCCCCTTTGAAGGCATGTGGTGGCAATGCA...AACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR GCA 90 bp | CAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTCATGGCAAACTGCATTaGCACCACATGCCTTCAAAG | + |
Preference number: 2 (lower is better) Translates to: QALTRNCPILISGGTVGVHGKLH*HHMPSK Trigger: CTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATG...AACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR TCA 90 bp | GGCCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAAATAAAAGTTCCACATaGAGTCAGTTTTCCACATGG | + |
Preference number: 2 (lower is better) Translates to: GPAGRQALTRNCPILISGNKSST*SQFSTW Trigger: CCATGTGGAAAACTGACTTCATGTGGAACTTTTATT...TCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR GCA 90 bp | CAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTGAGCTTGGTGCCCTGTaGAAATTTTATTTTGGGAGA | + |
Preference number: 2 (lower is better) Translates to: QALTRNCPILISGGTVGVELGAL*KFYFGR Trigger: TCTCCCAAAATAAAATTTGCACAGGGCACCAAGCTC...AACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR GCA 90 bp | AGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTTGGAGCTTGGTGCCCTGTaGAAATTTTATTTTGGGAGA | + |
Preference number: 2 (lower is better) Translates to: STHSELSHPDLGRHSGGLELGAL*KFYFGR Trigger: TCTCCCAAAATAAAATTTGCACAGGGCACCAAGCTC...CAAACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR GCA 90 bp | GCTTGTCTTTCTCGGTTTGCAGGATGGCGATGGTGCTATTGGATGAGTCCAGCTTTTTGCCAAGGTCTCTaGTCTCTGCAGCAGCTCGCA | + |
Preference number: 2 (lower is better) Translates to: ACLSRFAGWRWCYWMSPAFCQGL*SLQQLA Trigger: TGCGAGCTGCTGCAGAGAGCAGAGACCTTGGCAAAA...AGCTGGACTCATCCAATAGCACCATCGCCATCCTGCAAACCGAGAAAGACAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR-3UTR CCA 90 bp | AGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTTGGGTACTTTTGGAGCTTaGTGCCCTGTGCAAATTTTA | + |
Preference number: 2 (lower is better) Translates to: STHSELSHPDLGRHSGGLGTFGA*CPVQIL Trigger: TAAAATTTGCACAGGGCACCAAGCTCCAAAAGTACC...CAAACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR CAA 90 bp | TTCCGGCTGAATGCCATTCACCTGAGCCCCGTCACCGTGGGAACCTaGATGGTGATTGTCTTTTCCGAGCTGAACTTTGAGGAGATTGTA | + |
Preference number: 2 (lower is better) Translates to: FRLNAIHLSPVTVGT*MVIVFSELNFEEIV Trigger: TACAATCTCCTCAAAGTTCAGCTCGGAAAAGACAATCACCATCAAGGTTCCCACGGTGACGGGGCTCAGGTGAATGGCATTCAGCCGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR CAA 90 bp | CCTGCTTTAACTCTGCAACTTGCTCGGGATCTCTGGGAGGACATGTaGCTGAAGCCTGTTCACTCATGCCAGACGCTTGCGAAGATTTCA | + |
Preference number: 2 (lower is better) Translates to: PALTLQLARDLWEDM*LKPVHSCQTLAKIS Trigger: TGAAATCTTCGCAAGCGTCTGGCATGAGTGAACAGGCTTCAGCAACATGTCCTCCCAGAGATCCCGAGCAAGTTGCAGAGTTAAAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR CAA 90 bp | ACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTGCATaGCCACCACATGCCTTCAAAGGGGGTACTTTTGGAGCTTGGTGC | + |
Preference number: 2 (lower is better) Translates to: TECLKAISEPTWQTA*PPHAFKGGTFGAWC Trigger: GCACCAAGCTCCAAAAGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR GCA 90 bp | CAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTACTTTTGGAGCTTGGTaGCCTGTGCAAATTTTATTT | + |
Preference number: 2 (lower is better) Translates to: QALTRNCPILISGGTVGVTFGAW*PVQILF Trigger: AAATAAAATTTGCACAGGGCACCAAGCTCCAAAAGT...AACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR CCA 90 bp | GAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGATGGACTCGGAAAGTTTaGCTGGGGTTTCTGAGACGC | + |
Preference number: 2 (lower is better) Translates to: EPQATLSTVLSLQGLISRWTRKV*LGFLRR Trigger: GCGTCTCAGAAACCCCAGCCAAACTTTCCGAGTCCA...TCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR-3UTR GCA 90 bp | AGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTAAGGTCTCTGCTCTCTaGAGCAGCTCGCAGTTCTCC | + |
Preference number: 2 (lower is better) Translates to: STEVTECLKAISEPTWQTKVSAL*SSSQFS Trigger: GGAGAACTGCGAGCTGCTGCAGAGAGCAGAGACCTT...AGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR-3UTR TCA 90 bp | GAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAAAGTCACAGAGTGTCTaGAAGCCATCAGTGAACCAA | + |
Preference number: 2 (lower is better) Translates to: EPQATLSTVLSLQGLISRKSQSV*KPSVNQ Trigger: TTGGTTCACTGATGGCTTTCAGACACTCTGTGACTT...TCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR CCA 90 bp | TTTGAGGAGATTGTACTGGTCCTTGTGCTGCTGAATCTGAGATGCCTGCTGGGTGGTACTTTTGGAGCTTaGTGCCCTGTGCAAATTTTA | + |
Preference number: 2 (lower is better) Translates to: FEEIVLVLVLLNLRCLLGGTFGA*CPVQIL Trigger: TAAAATTTGCACAGGGCACCAAGCTCCAAAAGTACC...ACCCAGCAGGCATCTCAGATTCAGCAGCACAAGGACCAGTACAATCTCCTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR-3UTR CCA 90 bp | GAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAATCAGTGAACCAACATaGCAAACTGCATTGCCACCA | + |
Preference number: 2 (lower is better) Translates to: EPQATLSTVLSLQGLISRISEPT*QTALPP Trigger: TGGTGGCAATGCAGTTTGCCATGTTGGTTCACTGAT...TCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR CAA 90 bp | AGGTCATCTTGTTCTTTCTTAGAATCCGTAACTTCCAAGTCCAGCTaGTCTTTCTCGGTTTGCAGGATGGCGATGGTGCTATTGGATGAG | + |
Preference number: 2 (lower is better) Translates to: RSSCSFLESVTSKSS*SFSVCRMAMVLLDE Trigger: CTCATCCAATAGCACCATCGCCATCCTGCAAACCGAGAAAGACAAGCTGGACTTGGAAGTTACGGATTCTAAGAAAGAACAAGATGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR-3UTR CCA 90 bp | GATGACATACAGGAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGAGGTACTTTTGGAGCTTaGTGCCCTGTGCAAATTTTA | + |
Preference number: 2 (lower is better) Translates to: DDIQEPQATLSTVLSLQGGTFGA*CPVQIL Trigger: TAAAATTTGCACAGGGCACCAAGCTCCAAAAGTACC...TCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTCCTGTATGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR TCA 90 bp | AGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTAATAAAAGTTCCACATaGAGTCAGTTTTCCACATGG | + |
Preference number: 2 (lower is better) Translates to: SEPTWQTALPPHAFKGGTNKSST*SQFSTW Trigger: CCATGTGGAAAACTGACTTCATGTGGAACTTTTATT...AGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR GCA 90 bp | ACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTGCAGAGCTTGGTGCCCTGTaGAAATTTTATTTTGGGAGA | + |
Preference number: 2 (lower is better) Translates to: TEVTECLKAISEPTWQTAELGAL*KFYFGR Trigger: TCTCCCAAAATAAAATTTGCACAGGGCACCAAGCTC...TGCAGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR CCA 90 bp | GCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAGTTTCTGAGACGCTCTaGAATATAACTCATGTTTGC | + |
Preference number: 2 (lower is better) Translates to: APGYPKYSPFFTRINQPRVSETL*NITHVC Trigger: GCAAACATGAGTTATATTCCAGAGCGTCTCAGAAAC...TCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR-3UTR TCA 90 bp | TCAGCCGAGAACTCAAACGCTGACTTAGAAATGATGACTCCCATTGAATACACAAAGTCACAGAGTGTCTaGAAGCCATCAGTGAACCAA | + |
Preference number: 2 (lower is better) Translates to: SAENSNADLEMMTPIEYTKSQSV*KPSVNQ Trigger: TTGGTTCACTGATGGCTTTCAGACACTCTGTGACTT...TGTGTATTCAATGGGAGTCATCATTTCTAAGTCAGCGTTTGAGTTCTCGGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR TCA 90 bp | TGTCCTGGTCCTTGTCACCATCATCAATTTCATCATCATCGTCTTCTTGGTCTCTCTTCTTCAACTGGATaGCCGAGATCCTTGAGTTTA | + |
Preference number: 2 (lower is better) Translates to: CPGPCHHHQFHHHRLLGLSSSTG*PRSLSL Trigger: TAAACTCAAGGATCTCGGTCATCCAGTTGAAGAAGA...GAGACCAAGAAGACGATGATGATGAAATTGATGATGGTGACAAGGACCAGGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR-3UTR TCA 90 bp | ACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTGCAATCCTAGTTTCTCTATaGAATTCTCTTTGCCAATCC | + |
Preference number: 2 (lower is better) Translates to: TEVTECLKAISEPTWQTAILVSL*NSLCQS Trigger: GGATTGGCAAAGAGAATTTCATAGAGAAACTAGGAT...TGCAGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR-3UTR TCA 90 bp | AGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTGAGTTTACTCTTCAGTaGCAGGATTTTCTGATCTTG | + |
Preference number: 2 (lower is better) Translates to: STEVTECLKAISEPTWQTEFTLQ*QDFLIL Trigger: CAAGATCAGAAAATCCTGTCACTGAAGAGTAAACTC...AGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR-3UTR GCA 90 bp | ACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTGCAACTTTTGGAGCTTGGTaGCCTGTGCAAATTTTATTT | + |
Preference number: 2 (lower is better) Translates to: TEVTECLKAISEPTWQTATFGAW*PVQILF Trigger: AAATAAAATTTGCACAGGGCACCAAGCTCCAAAAGT...TGCAGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR GCA 90 bp | TTAATCAAATGTGTGAGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAATGCATTGCCACCACATaGCTTCAAAGGGGGTACTTT | + |
Preference number: 2 (lower is better) Translates to: LIKCVSTEVTECLKAISECIATT*LQRGYF Trigger: AAAGTACCCCCTTTGAAGGCATGTGGTGGCAATGCA...TTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACTCACACATTTGATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR CCA 90 bp | TCAGCCGAGAACTCAAACGCTGACTTAGAAATGATGACTCCCATTGAATACACAAAATATCATATACTCTaGACTCGGAAAGTTTGGCTG | + |
Preference number: 2 (lower is better) Translates to: SAENSNADLEMMTPIEYTKYHIL*TRKVWL Trigger: CAGCCAAACTTTCCGAGTCCAGAGTATATGATATTT...TGTGTATTCAATGGGAGTCATCATTTCTAAGTCAGCGTTTGAGTTCTCGGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR-3UTR GCA 90 bp | AAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAACTCAAACGCTGACTACGATGTTATCATGCTaGTCTAAGGTTTTCTTTACC | + |
Preference number: 2 (lower is better) Translates to: KYSPFFTRINQPRTQTLTTMLSC*SKVFFT Trigger: GGTAAAGAAAACCTTAGAGCAGCATGATAACATCGT...AGTCAGCGTTTGAGTTCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR TCA 72 bp | CTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTaGTCTCGGGAGGCACAGTGGGGGTTTGAGGGGATG | + |
Preference number: 3 (lower is better) Translates to: LDGKHSLGTVPS*SREAQWGFEGM Trigger: CATCCCCTCAAACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
||
3UTR-3UTR CAA 90 bp | GGGACAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACTCAAAGGGGGTACTTTaGGAGCTTGGTGCCCTGTGC | + |
Preference number: 3 (lower is better) Translates to: GTIFPLSRQNVAPLDGKHSKGVL*ELGALC Trigger: GCACAGGGCACCAAGCTCCAAAAGTACCCCCTTTGA...GTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTGTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
||
3UTR-3UTR CAA 90 bp | CAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTTCAAAGGGGGTACTTTaGGAGCTTGGTGCCCTGTGC | + |
Preference number: 3 (lower is better) Translates to: QALTRNCPILISGGTVGVSKGVL*ELGALC Trigger: GCACAGGGCACCAAGCTCCAAAAGTACCCCCTTTGA...AACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
||
3UTR-3UTR CAA 90 bp | CCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGACATGGCAAACTGCATaGCCACCACATGCCTTCAAA | + |
Preference number: 3 (lower is better) Translates to: PRWTASTHSELSHPDLGRTWQTA*PPHAFK Trigger: TTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGT...CCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
||
3UTR CCA 72 bp | CAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTaGACGGCAAGCACTCACTCGGAACTGTCCCATCCT | + |
Preference number: 3 (lower is better) Translates to: QSFLSVGRMWPR*TASTHSELSHP Trigger: AGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
||
3UTR-3UTR CAA 90 bp | AGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTTGACATGGCAAACTGCATaGCCACCACATGCCTTCAAA | + |
Preference number: 3 (lower is better) Translates to: STHSELSHPDLGRHSGGLTWQTA*PPHAFK Trigger: TTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGT...CAAACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
||
3UTR TCA 72 bp | GGTCCTTGTGCTGCTGAATCTGAGATGCCTGCTGGGTaGCTGCTGTCTGTAGCTGCTCGTTCTGACACTTCA | + |
Preference number: 3 (lower is better) Translates to: GPCAAESEMPAG*LLSVAARSDTS Trigger: TGAAGTGTCAGAACGAGCAGCTACAGACAGCAGTCACCCAGCAGGCATCTCAGATTCAGCAGCACAAGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR-3UTR CAA 90 bp | GCTTGTCTTTCTCGGTTTGCAGGATGGCGATGGTGCTATTGGATGAGTCCAGCTGTCACCGTGGGAACCTaGATGGTGATTGTCTTTTCC | + |
Preference number: 3 (lower is better) Translates to: ACLSRFAGWRWCYWMSPAVTVGT*MVIVFS Trigger: GGAAAAGACAATCACCATCAAGGTTCCCACGGTGAC...AGCTGGACTCATCCAATAGCACCATCGCCATCCTGCAAACCGAGAAAGACAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR TCA 72 bp | ATGGCGATGGTGCTATTGGATGAGTCCAGCTGCTTTTaGATGGCGGTCCTCTCCTCAGACAGCGCTTTAATC | + |
Preference number: 3 (lower is better) Translates to: MAMVLLDESSCF*MAVLSSDSALI Trigger: GATTAAAGCGCTGTCTGAGGAGAGGACCGCCATTCAAAAGCAGCTGGACTCATCCAATAGCACCATCGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR GCA 72 bp | TCCGTAACTTCCAAGTCCAGCTTGTCTTTCTCGGTTTaGAGGATGGCGATGGTGCTATTGGATGAGTCCAGC | + |
Preference number: 3 (lower is better) Translates to: SVTSKSSLSFSV*RMAMVLLDESS Trigger: GCTGGACTCATCCAATAGCACCATCGCCATCCTGCAAACCGAGAAAGACAAGCTGGACTTGGAAGTTACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR CCA 72 bp | CTGCTGTCTGTAGCTGCTCGTTCTGACACTTCAGGGTaGAGACTTGCTGTTTCAGTTCCTCCAGTTGTAGGT | + |
Preference number: 3 (lower is better) Translates to: LLSVAARSDTSG*RLAVSVPPVVG Trigger: ACCTACAACTGGAGGAACTGAAACAGCAAGTCTCCACCCTGAAGTGTCAGAACGAGCAGCTACAGACAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR CCA 72 bp | GTTCCTGCTTTAACTCTGCAACTTGCTCGGGATCTCTaGGAGGACATGTTGCTGAAGCCTGTTCACTCATGC | + |
Preference number: 3 (lower is better) Translates to: VPALTLQLARDL*EDMLLKPVHSC Trigger: GCATGAGTGAACAGGCTTCAGCAACATGTCCTCCCAGAGATCCCGAGCAAGTTGCAGAGTTAAAGCAGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR CCA 72 bp | TGTCTTTCTCGGTTTGCAGGATGGCGATGGTGCTATTaGATGAGTCCAGCTGCTTTTGAATGGCGGTCCTCT | + |
Preference number: 3 (lower is better) Translates to: CLSRFAGWRWCY*MSPAAFEWRSS Trigger: AGAGGACCGCCATTCAAAAGCAGCTGGACTCATCCAATAGCACCATCGCCATCCTGCAAACCGAGAAAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR CCA 72 bp | GTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATaGCAAACTGCATTGCCACCACATGCCTTCAAAGGG | + |
Preference number: 3 (lower is better) Translates to: VTECLKAISEPT*QTALPPHAFKG Trigger: CCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
||
3UTR CCA 72 bp | AGTCCAGCTTGTCTTTCTCGGTTTGCAGGATGGCGATaGTGCTATTGGATGAGTCCAGCTGCTTTTGAATGG | + |
Preference number: 3 (lower is better) Translates to: SPACLSRFAGWR*CYWMSPAAFEW Trigger: CCATTCAAAAGCAGCTGGACTCATCCAATAGCACCATCGCCATCCTGCAAACCGAGAAAGACAAGCTGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR TCA 72 bp | GACTTTTTAACTCTTCTATCTCTTCCCTCAGCCGACTaGTTTCTTCCGGCTGAATGCCATTCACCTGAGCCC | + |
Preference number: 3 (lower is better) Translates to: DFLTLLSLPSAD*FLPAECHSPEP Trigger: GGGCTCAGGTGAATGGCATTCAGCCGGAAGAAATCAGTCGGCTGAGGGAAGAGATAGAAGAGTTAAAAAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR TCA 72 bp | TCCTTTTCAGCTAGCTGGCCTTGTAAGAGCGCCTGCTaGCTTTTTAACTCTTCTATCTCTTCCCTCAGCCGA | + |
Preference number: 3 (lower is better) Translates to: SFSASWPCKSAC*LFNSSISSLSR Trigger: TCGGCTGAGGGAAGAGATAGAAGAGTTAAAAAGTCAGCAGGCGCTCTTACAAGGCCAGCTAGCTGAAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR GCA 72 bp | TTTAATGCTGTCAGTTCCTGCTTTAACTCTGCAACTTaGTCGGGATCTCTGGGAGGACATGTTGCTGAAGCC | + |
Preference number: 3 (lower is better) Translates to: FNAVSSCFNSAT*SGSLGGHVAEA Trigger: GGCTTCAGCAACATGTCCTCCCAGAGATCCCGAGCAAGTTGCAGAGTTAAAGCAGGAACTGACAGCATTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR GCA 72 bp | CTTCCTTCTACATCCGTGGTCTTAGCAGCACTCACATaGTCACTCTCTCCTTCTACAGGAACTGATTTTGCC | + |
Preference number: 3 (lower is better) Translates to: LPSTSVVLAALT*SLSPSTGTDFA Trigger: GGCAAAATCAGTTCCTGTAGAAGGAGAGAGTGAGCATGTGAGTGCTGCTAAGACCACGGATGTAGAAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR-3UTR CAA 90 bp | TGTCCTGGTCCTTGTCACCATCATCAATTTCATCATCATCGTCTTCTTGGTCTCCTTGTCTTTCTCGGTTaGCAGGATGGCGATGGTGCT | + |
Preference number: 3 (lower is better) Translates to: CPGPCHHHQFHHHRLLGLLVFLG*QDGDGA Trigger: AGCACCATCGCCATCCTGCAAACCGAGAAAGACAAG...GAGACCAAGAAGACGATGATGATGAAATTGATGATGGTGACAAGGACCAGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR-3UTR CAA 90 bp | ACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTGCAACTTCCAAGTCCAGCTaGTCTTTCTCGGTTTGCAGG | + |
Preference number: 3 (lower is better) Translates to: TEVTECLKAISEPTWQTATSKSS*SFSVCR Trigger: CCTGCAAACCGAGAAAGACAAGCTGGACTTGGAAGT...TGCAGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR-3UTR CAA 90 bp | AAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAACTCAAACGCTGACTCTGGACTCGGAAAGTTaGGCTGGGGTTTCTGAGACG | + |
Preference number: 3 (lower is better) Translates to: KYSPFFTRINQPRTQTLTLDSES*AGVSET Trigger: CGTCTCAGAAACCCCAGCCAAACTTTCCGAGTCCAG...AGTCAGCGTTTGAGTTCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR-3UTR CAA 90 bp | AGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTACATGGCAAACTGCATaGCCACCACATGCCTTCAAA | + |
Preference number: 3 (lower is better) Translates to: STEVTECLKAISEPTWQTTWQTA*PPHAFK Trigger: TTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGT...AGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
||
3UTR GCA 72 bp | CTCTGGGAGGACATGTTGCTGAAGCCTGTTCACTCATaGCAGACGCTTGCGAAGATTTCAAATTTTCAATCA | + |
Preference number: 3 (lower is better) Translates to: LWEDMLLKPVHS*QTLAKISNFQS Trigger: TGATTGAAAATTTGAAATCTTCGCAAGCGTCTGGCATGAGTGAACAGGCTTCAGCAACATGTCCTCCCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR TCA 72 bp | AACCTTGATGGTGATTGTCTTTTCCGAGCTGAACTTTaGGGAGATTGTACTGGTCCTTGTGCTGCTGAATCT | + |
Preference number: 3 (lower is better) Translates to: NLDGDCLFRAEL*GDCTGPCAAES Trigger: AGATTCAGCAGCACAAGGACCAGTACAATCTCCTCAAAGTTCAGCTCGGAAAAGACAATCACCATCAAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR TCA 72 bp | TCTTGGTCTCCAGATTCATCTTCTTCTTCAACTGGATaGCCGAGATCCTTGAGTTTACTCTTCAGTGACAGG | + |
Preference number: 3 (lower is better) Translates to: SWSPDSSSSSTG*PRSLSLLFSDR Trigger: CCTGTCACTGAAGAGTAAACTCAAGGATCTCGGTCATCCAGTTGAAGAAGAAGATGAATCTGGAGACCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
||
3UTR-3UTR CAA 90 bp | GCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGATTCTGTCTTTATTTTTaGTGTGGAGGCAAACCAAAG | + |
Preference number: 3 (lower is better) Translates to: APGYPKYSPFFTRINQPRFCLYF*CGGKPK Trigger: CTTTGGTTTGCCTCCACACAAAAAATAAAGACAGAA...TCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR-3UTR CAA 90 bp | GATGACATACAGGAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTCTGTCTTTATTTTTaGTGTGGAGGCAAACCAAAG | + |
Preference number: 3 (lower is better) Translates to: DDIQEPQATLSTVLSLQGFCLYF*CGGKPK Trigger: CTTTGGTTTGCCTCCACACAAAAAATAAAGACAGAA...TCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTCCTGTATGTCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR CCA 72 bp | CAGCTTTGTAAACTCATGATCAAATATCATATACTCTaGACTCGGAAAGTTTGGCTGGGGTTTCTGAGACGC | + |
Preference number: 3 (lower is better) Translates to: QLCKLMIKYHIL*TRKVWLGFLRR Trigger: GCGTCTCAGAAACCCCAGCCAAACTTTCCGAGTCCAGAGTATATGATATTTGATCATGAGTTTACAAAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR TCA 72 bp | ATATACTCTGGACTCGGAAAGTTTGGCTGGGGTTTCTaGGACGCTCTGGAATATAACTCATGTTTGCTAATA | + |
Preference number: 3 (lower is better) Translates to: IYSGLGKFGWGF*DALEYNSCLLI Trigger: TATTAGCAAACATGAGTTATATTCCAGAGCGTCTCAGAAACCCCAGCCAAACTTTCCGAGTCCAGAGTATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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3UTR-3UTR CAA 90 bp | AAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAACTCAAACGCTGACTTTCTGTCTTTATTTTTaGTGTGGAGGCAAACCAAAG | + |
Preference number: 3 (lower is better) Translates to: KYSPFFTRINQPRTQTLTFCLYF*CGGKPK Trigger: CTTTGGTTTGCCTCCACACAAAAAATAAAGACAGAA...AGTCAGCGTTTGAGTTCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR TCA 72 bp | ATTCATCTTCTTCTTCAACTGGATGACCGAGATCCTTaGGTTTACTCTTCAGTGACAGGATTTTCTGATCTT | + |
Preference number: 3 (lower is better) Translates to: IHLLLQLDDRDP*VYSSVTGFSDL Trigger: AAGATCAGAAAATCCTGTCACTGAAGAGTAAACTCAAGGATCTCGGTCATCCAGTTGAAGAAGAAGATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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CDS-3UTR TCA 90 bp | CCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGATGCTGGTGGCCAGCTaGACCCTGAGCAGTTGCTCT | + |
Preference number: 4 (lower is better) Translates to: PRWTASTHSELSHPDLGRMLVAS*TLSSCS Trigger: AGAGCAACTGCTCAGGGTTCAGCTGGCCACCAGCAT...CCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | AGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTTGTGGGTGGCATTTCCCTaGAGCGCATGGGCGAGGGCC | + |
Preference number: 4 (lower is better) Translates to: STHSELSHPDLGRHSGGLWVAFP*SAWARA Trigger: GGCCCTCGCCCATGCGCTGCAGGGAAATGCCACCCA...CAAACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | CCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGGCCCACACTGGAACATaGCCTTCTGGCAGCTACTGG | + |
Preference number: 4 (lower is better) Translates to: PRWTASTHSELSHPDLGRAHTGT*PSGSYW Trigger: CCAGTAGCTGCCAGAAGGCCATGTTCCAGTGTGGGC...CCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
||
CDS-3UTR GCA 90 bp | CAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACTCACTGGGTGGCATTTCCCTaGAGCGCATGGGCGAGGGCC | + |
Preference number: 4 (lower is better) Translates to: QSFLSVGRMWPRWTASTHWVAFP*SAWARA Trigger: GGCCCTCGCCCATGCGCTGCAGGGAAATGCCACCCA...GTGAGTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | CCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGGCAGGATGGCGATGGTaGTATTGGATGAGTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: PRWTASTHSELSHPDLGRAGWRW*YWMSPA Trigger: AGCTGGACTCATCCAATAGCACCATCGCCATCCTGC...CCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | GGCCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGACCTGGGAAAGAATGTTaGTGCATTGCTGCAGGAGCG | + |
Preference number: 4 (lower is better) Translates to: GPAGRQALTRNCPILISGPGKEC*CIAAGA Trigger: CGCTCCTGCAGCAATGCACCAACATTCTTTCCCAGG...TCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
||
CDS-3UTR TCA 90 bp | CCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGGATGGTGCTATTGGATaGGTCCAGCTGCTTTTGAAT | + |
Preference number: 4 (lower is better) Translates to: PRWTASTHSELSHPDLGRDGAIG*VQLLLN Trigger: ATTCAAAAGCAGCTGGACTCATCCAATAGCACCATC...CCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | GGCCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAAAGCCTTGGACCAACTaGTCTTCTTCTCCGAGATTT | + |
Preference number: 4 (lower is better) Translates to: GPAGRQALTRNCPILISGKPWTN*SSSPRF Trigger: AAATCTCGGAGAAGAAGAGCAGTTGGTCCAAGGCTT...TCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | AGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTTGTTTTGCCAAGGTCTCTaGTCTCTGCAGCAGCTCGCA | + |
Preference number: 4 (lower is better) Translates to: STHSELSHPDLGRHSGGLFCQGL*SLQQLA Trigger: TGCGAGCTGCTGCAGAGAGCAGAGACCTTGGCAAAA...CAAACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031355.10 |
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CDS-3UTR CCA 90 bp | CAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACTCACTGGAACATGGCCTTCTaGCAGCTACTGGTAGCACCG | + |
Preference number: 4 (lower is better) Translates to: QSFLSVGRMWPRWTASTHWNMAF*QLLVAP Trigger: CGGTGCTACCAGTAGCTGCCAGAAGGCCATGTTCCA...GTGAGTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
||
CDS-3UTR CCA 90 bp | CAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTCTTGCTCGGGATCTCTaGGAGGACATGTTGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: QALTRNCPILISGGTVGVLARDL*EDMLLK Trigger: CTTCAGCAACATGTCCTCCCAGAGATCCCGAGCAAG...AACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031355.10 |
||
CDS-3UTR TCA 90 bp | CTGGGACAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCGGTCACTTTCTGTGCTaGCCAACCAGAGTTTTCCTC | + |
Preference number: 4 (lower is better) Translates to: LGQSFLSVGRMWPRWTASGHFLC*PTRVFL Trigger: GAGGAAAACTCTGGTTGGTCAGCACAGAAAGTGACC...GCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTGTCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
||
CDS-3UTR TCA 90 bp | CCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGTCTTCTTCAACTGGATaGCCGAGATCCTTGAGTTTA | + |
Preference number: 4 (lower is better) Translates to: PRWTASTHSELSHPDLGRSSSTG*PRSLSL Trigger: TAAACTCAAGGATCTCGGTCATCCAGTTGAAGAAGA...CCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
||
CDS-3UTR GCA 90 bp | GATGACATACAGGAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGACCGGAGGGTTGCCGATaGTGGTGGCCAGCTGAACCC | + |
Preference number: 4 (lower is better) Translates to: DDIQEPQATLSTVLSLQGPEGCR*WWPAEP Trigger: GGGTTCAGCTGGCCACCAGCATCGGCAACCCTCCGG...TCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTCCTGTATGTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | AGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTTTTCCCTGCAGCGCATaGGCGAGGGCCACAGCAGCA | + |
Preference number: 4 (lower is better) Translates to: SEPTWQTALPPHAFKGGTFPCSA*ARATAA Trigger: TGCTGCTGTGGCCCTCGCCCATGCGCTGCAGGGAAA...AGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
||
CDS-3UTR TCA 90 bp | AGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTTGTTTGGCTGGGGTTTCTaGGACGCTCTGGAATATAAC | + |
Preference number: 4 (lower is better) Translates to: STHSELSHPDLGRHSGGLFGWGF*DALEYN Trigger: GTTATATTCCAGAGCGTCTCAGAAACCCCAGCCAAA...CAAACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR TCA 90 bp | CTGGGACAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCTCCTTCTACAGGAACTaGTTTTGCCAAGGTCTCTGC | + |
Preference number: 4 (lower is better) Translates to: LGQSFLSVGRMWPRWTASSFYRN*FCQGLC Trigger: GCAGAGACCTTGGCAAAATCAGTTCCTGTAGAAGGA...GCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTGTCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031355.10 |
||
CDS-3UTR TCA 90 bp | CCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGGAGTTTACTCTTCAGTaGCAGGATTTTCTGATCTTG | + |
Preference number: 4 (lower is better) Translates to: PRWTASTHSELSHPDLGREFTLQ*QDFLIL Trigger: CAAGATCAGAAAATCCTGTCACTGAAGAGTAAACTC...CCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | CAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACTCACGGGAAAGAATGTTGGTaGATTGCTGCAGGAGCGACA | + |
Preference number: 4 (lower is better) Translates to: QSFLSVGRMWPRWTASTHGKECW*IAAGAT Trigger: TGTCGCTCCTGCAGCAATGCACCAACATTCTTTCCC...GTGAGTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | GGCCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGATTCTCCGAGATTTTCTaGAATCTGTCCTGTAAGGAA | + |
Preference number: 4 (lower is better) Translates to: GPAGRQALTRNCPILISGFSEIF*NLSCKE Trigger: TTCCTTACAGGACAGATTGCAGAAAATCTCGGAGAA...TCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | GGGACAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACAACTCTTTGGTCTCCTaGAGCAAAGCAGACAGCCTT | + |
Preference number: 4 (lower is better) Translates to: GTIFPLSRQNVAPLDGKHNSLVS*SKADSL Trigger: AAGGCTGTCTGCTTTGCTGCAGGAGACCAAAGAGTT...GTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | GGCCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGCATTAAATGTAGATTaGTCACTTTCTGTGCTGACC | + |
Preference number: 4 (lower is better) Translates to: GPAGRQALTRNCPILISGALNVD*SLSVLT Trigger: GGTCAGCACAGAAAGTGACCAATCTACATTTAATGC...TCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | GGCCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGATGTATTTTGCTTCCCTaGGAAAGAATGTTGGTGCAT | + |
Preference number: 4 (lower is better) Translates to: GPAGRQALTRNCPILISGCILLP*ERMLVH Trigger: ATGCACCAACATTCTTTCCCAGGGAAGCAAAATACA...TCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR TCA 90 bp | CAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTGATGGTGCTATTGGATaGGTCCAGCTGCTTTTGAAT | + |
Preference number: 4 (lower is better) Translates to: QALTRNCPILISGGTVGVDGAIG*VQLLLN Trigger: ATTCAAAAGCAGCTGGACTCATCCAATAGCACCATC...AACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | TCAGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTAATGTTGGTGCATTGCTaGAGGAGCGACACCGGAGGG | + |
Preference number: 4 (lower is better) Translates to: SVNQHGKLHCHHMPSKGVMLVHC*RSDTGG Trigger: CCCTCCGGTGTCGCTCCTGCAGCAATGCACCAACAT...TACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | CCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGGTCACGATGTTATCATaGTGCTCTAAGGTTTTCTTT | + |
Preference number: 4 (lower is better) Translates to: PRWTASTHSELSHPDLGRVTMLS*CSKVFF Trigger: AAAGAAAACCTTAGAGCAGCATGATAACATCGTGAC...CCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | CAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTTTAGCAGCACTCACATaGTCACTCTCTCCTTCTACA | + |
Preference number: 4 (lower is better) Translates to: QALTRNCPILISGGTVGVLAALT*SLSPST Trigger: TGTAGAAGGAGAGAGTGAGCATGTGAGTGCTGCTAA...AACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | CCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGTTCTCCGAGATTTTCTaGAATCTGTCAGCATTTCTT | + |
Preference number: 4 (lower is better) Translates to: PRWTASTHSELSHPDLGRFSEIF*NLSAFL Trigger: AAGAAATGCTGACAGATTGCAGAAAATCTCGGAGAA...CCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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CDS-3UTR CCA 90 bp | GGGACAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACAGATGTTCCATAGCTTaGATTCCCACTTCTAAGCGG | + |
Preference number: 4 (lower is better) Translates to: GTIFPLSRQNVAPLDGKHRCSIA*IPTSKR Trigger: CCGCTTAGAAGTGGGAATCCAAGCTATGGAACATCT...GTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | CTGGGACAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCAGATGTTCCATAGCTTaGATTCCCACTTCTAAGCGG | + |
Preference number: 4 (lower is better) Translates to: LGQSFLSVGRMWPRWTASRCSIA*IPTSKR Trigger: CCGCTTAGAAGTGGGAATCCAAGCTATGGAACATCT...GCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTGTCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | CCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGAAAGCAACAATTTTCTaGATTGCTCCATTGCTCCTT | + |
Preference number: 4 (lower is better) Translates to: PRWTASTHSELSHPDLGRKATIF*IAPLLL Trigger: AAGGAGCAATGGAGCAATCCAGAAAATTGTTGCTTT...CCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | GATGACATACAGGAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGACACCGGGAGGGTTGGTaGGAGATACCAGTACCCGCA | + |
Preference number: 4 (lower is better) Translates to: DDIQEPQATLSTVLSLQGHREGW*EIPVPA Trigger: TGCGGGTACTGGTATCTCCCACCAACCCTCCCGGTG...TCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTCCTGTATGTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | AGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTGCCCACACTGGAACATaGCCTTCTGGCAGCTACTGG | + |
Preference number: 4 (lower is better) Translates to: SEPTWQTALPPHAFKGGTAHTGT*PSGSYW Trigger: CCAGTAGCTGCCAGAAGGCCATGTTCCAGTGTGGGC...AGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | ACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTGCATTTCCCTGCAGCGCATaGGCGAGGGCCACAGCAGCA | + |
Preference number: 4 (lower is better) Translates to: TEVTECLKAISEPTWQTAFPCSA*ARATAA Trigger: TGCTGCTGTGGCCCTCGCCCATGCGCTGCAGGGAAA...TGCAGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | CAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACTCACTGGCGATGGTGCTATTaGATGAGTCCAGCTGCTTTT | + |
Preference number: 4 (lower is better) Translates to: QSFLSVGRMWPRWTASTHWRWCY*MSPAAF Trigger: AAAAGCAGCTGGACTCATCCAATAGCACCATCGCCA...GTGAGTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | TCAGCCGAGAACTCAAACGCTGACTTAGAAATGATGACTCCCATTGAATACACACCGGAGGGTTGCCGATaGTGGTGGCCAGCTGAACCC | + |
Preference number: 4 (lower is better) Translates to: SAENSNADLEMMTPIEYTPEGCR*WWPAEP Trigger: GGGTTCAGCTGGCCACCAGCATCGGCAACCCTCCGG...TGTGTATTCAATGGGAGTCATCATTTCTAAGTCAGCGTTTGAGTTCTCGGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | CAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACTCACAAGCCTTGGACCAACTaGTCTTCTTCTCCGAGATTT | + |
Preference number: 4 (lower is better) Translates to: QSFLSVGRMWPRWTASTHKPWTN*SSSPRF Trigger: AAATCTCGGAGAAGAAGAGCAGTTGGTCCAAGGCTT...GTGAGTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | GGGACAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACAATGCTGTCAGTTCCTaGTTTAACTCTGCAACTTGC | + |
Preference number: 4 (lower is better) Translates to: GTIFPLSRQNVAPLDGKHNAVSS*FNSATC Trigger: GCAAGTTGCAGAGTTAAAGCAGGAACTGACAGCATT...GTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031355.10 |
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CDS-3UTR GCA 90 bp | AGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTAAGGTCTCTGCTCTCTaGAGCAGCTCGCAGTTCTCC | + |
Preference number: 4 (lower is better) Translates to: SEPTWQTALPPHAFKGGTKVSAL*SSSQFS Trigger: GGAGAACTGCGAGCTGCTGCAGAGAGCAGAGACCTT...AGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031355.10 |
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CDS-3UTR GCA 90 bp | CAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACTCACTTAGCAGCACTCACATaGTCACTCTCTCCTTCTACA | + |
Preference number: 4 (lower is better) Translates to: QSFLSVGRMWPRWTASTHLAALT*SLSPST Trigger: TGTAGAAGGAGAGAGTGAGCATGTGAGTGCTGCTAA...GTGAGTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | GGGACAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACGCATTAAATGTAGATTaGTCACTTTCTGTGCTGACC | + |
Preference number: 4 (lower is better) Translates to: GTIFPLSRQNVAPLDGKHALNVD*SLSVLT Trigger: GGTCAGCACAGAAAGTGACCAATCTACATTTAATGC...GTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | GCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGATGGAACATGGCCTTCTaGCAGCTACTGGTAGCACCG | + |
Preference number: 4 (lower is better) Translates to: APGYPKYSPFFTRINQPRWNMAF*QLLVAP Trigger: CGGTGCTACCAGTAGCTGCCAGAAGGCCATGTTCCA...TCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | AGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTGTTGCTCTTTCTGGGTaGCATTTCCCTGCAGCGCAT | + |
Preference number: 4 (lower is better) Translates to: SEPTWQTALPPHAFKGGTVALSG*HFPAAH Trigger: ATGCGCTGCAGGGAAATGCCACCCAGAAAGAGCAAC...AGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | CAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTTGTATTTTGCTTCCCTaGGAAAGAATGTTGGTGCAT | + |
Preference number: 4 (lower is better) Translates to: QALTRNCPILISGGTVGVCILLP*ERMLVH Trigger: ATGCACCAACATTCTTTCCCAGGGAAGCAAAATACA...AACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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3UTR CAA 72 bp | AATGCCATTCACCTGAGCCCCGTCACCGTGGGAACCTaGATGGTGATTGTCTTTTCCGAGCTGAACTTTGAG | + |
Preference number: 4 (lower is better) Translates to: NAIHLSPVTVGT*MVIVFSELNFE Trigger: CTCAAAGTTCAGCTCGGAAAAGACAATCACCATCAAGGTTCCCACGGTGACGGGGCTCAGGTGAATGGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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CDS-3UTR TCA 90 bp | GGGACAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACATCGTTGAAATAAATTaGAATGCCCAAAAGAAGGGC | + |
Preference number: 4 (lower is better) Translates to: GTIFPLSRQNVAPLDGKHIVEIN*NAQKKG Trigger: GCCCTTCTTTTGGGCATTTCAATTTATTTCAACGAT...GTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | AGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTACGGGAGGCCCTAGCTaGTTTAAAAGAGAAGTCAGG | + |
Preference number: 4 (lower is better) Translates to: SEPTWQTALPPHAFKGGTTGGPS*FKREVR Trigger: CCTGACTTCTCTTTTAAAGCAGCTAGGGCCTCCCGT...AGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | CAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTACGATGTTATCATGCTaGTCTAAGGTTTTCTTTACC | + |
Preference number: 4 (lower is better) Translates to: QALTRNCPILISGGTVGVTMLSC*SKVFFT Trigger: GGTAAAGAAAACCTTAGAGCAGCATGATAACATCGT...AACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | GCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGACTGCTGAATCTGAGATaGCTGCTGGGTGACTGCTGT | + |
Preference number: 4 (lower is better) Translates to: APGYPKYSPFFTRINQPRLLNLR*LLGDCC Trigger: ACAGCAGTCACCCAGCAGGCATCTCAGATTCAGCAG...TCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | CAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTAAAATTTCTGTAAACTaGCTTCCCAAATCCTCACTC | + |
Preference number: 4 (lower is better) Translates to: QALTRNCPILISGGTVGVKISVN*LPKSSL Trigger: GAGTGAGGATTTGGGAAGCCAGTTTACAGAAATTTT...AACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | CTGGGACAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCCTGATACAGTATTTATaGTCTCTGTCAGGATATCAG | + |
Preference number: 4 (lower is better) Translates to: LGQSFLSVGRMWPRWTASLIQYL*SLSGYQ Trigger: CTGATATCCTGACAGAGACCATAAATACTGTATCAG...GCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTGTCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | GATGACATACAGGAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGAGTTGCTCTTTCTGGGTaGCATTTCCCTGCAGCGCAT | + |
Preference number: 4 (lower is better) Translates to: DDIQEPQATLSTVLSLQGVALSG*HFPAAH Trigger: ATGCGCTGCAGGGAAATGCCACCCAGAAAGAGCAAC...TCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTCCTGTATGTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR TCA 90 bp | GAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGGTCACTTTCTGTGCTaGCCAACCAGAGTTTTCCTC | + |
Preference number: 4 (lower is better) Translates to: EPQATLSTVLSLQGLISRGHFLC*PTRVFL Trigger: GAGGAAAACTCTGGTTGGTCAGCACAGAAAGTGACC...TCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | GCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAACGGGAGGCCCTAGCTaGTTTAAAAGAGAAGTCAGG | + |
Preference number: 4 (lower is better) Translates to: APGYPKYSPFFTRINQPRTGGPS*FKREVR Trigger: CCTGACTTCTCTTTTAAAGCAGCTAGGGCCTCCCGT...TCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | GAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGGGAAAGAATGTTGGTaGATTGCTGCAGGAGCGACA | + |
Preference number: 4 (lower is better) Translates to: EPQATLSTVLSLQGLISRGKECW*IAAGAT Trigger: TGTCGCTCCTGCAGCAATGCACCAACATTCTTTCCC...TCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | AGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTTTTAACTCTGCAACTTaGTCGGGATCTCTGGGAGGA | + |
Preference number: 4 (lower is better) Translates to: SEPTWQTALPPHAFKGGTFNSAT*SGSLGG Trigger: TCCTCCCAGAGATCCCGAGCAAGTTGCAGAGTTAAA...AGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031355.10 |
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CDS-3UTR CCA 90 bp | TCAGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTAAGGGCACATAAGCCTTaGACCAACTGCTCTTCTTCT | + |
Preference number: 4 (lower is better) Translates to: SVNQHGKLHCHHMPSKGVRAHKP*TNCSSS Trigger: AGAAGAAGAGCAGTTGGTCCAAGGCTTATGTGCCCT...TACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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3UTR CAA 72 bp | CTGAAAGCCATCAGTGAACCAACATGGCAAACTGCATaGCCACCACATGCCTTCAAAGGGGGTACTTTTGGA | + |
Preference number: 4 (lower is better) Translates to: LKAISEPTWQTA*PPHAFKGGTFG Trigger: TCCAAAAGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACTGATGGCTTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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CDS-3UTR TCA 90 bp | TCAGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTAGCCTCGGATAACCTCTaGTACAGTATTTATGGTCTC | + |
Preference number: 4 (lower is better) Translates to: SVNQHGKLHCHHMPSKGVASDNL*YSIYGL Trigger: GAGACCATAAATACTGTATCAGAGGTTATCCGAGGC...TACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
||
CDS-3UTR GCA 90 bp | AAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAACTCAAACGCTGACTATGTTGGTGCATTGCTaGAGGAGCGACACCGGAGGG | + |
Preference number: 4 (lower is better) Translates to: KYSPFFTRINQPRTQTLTMLVHC*RSDTGG Trigger: CCCTCCGGTGTCGCTCCTGCAGCAATGCACCAACAT...AGTCAGCGTTTGAGTTCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
||
CDS-3UTR GCA 90 bp | TCAGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTAAAGCCTTGGACCAACTaGTCTTCTTCTCCGAGATTT | + |
Preference number: 4 (lower is better) Translates to: SVNQHGKLHCHHMPSKGVKPWTN*SSSPRF Trigger: AAATCTCGGAGAAGAAGAGCAGTTGGTCCAAGGCTT...TACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
||
CDS-3UTR GCA 90 bp | AGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTCTGCTGAATCTGAGATaGCTGCTGGGTGACTGCTGT | + |
Preference number: 4 (lower is better) Translates to: STEVTECLKAISEPTWQTLLNLR*LLGDCC Trigger: ACAGCAGTCACCCAGCAGGCATCTCAGATTCAGCAG...AGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
||
CDS-3UTR GCA 90 bp | AGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTGCAGGATGGCGATGGTaGTATTGGATGAGTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: STEVTECLKAISEPTWQTAGWRW*YWMSPA Trigger: AGCTGGACTCATCCAATAGCACCATCGCCATCCTGC...AGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | AGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTTGGAAGGCAGAAGAGTaGCCACGATCTCTCCTTGTC | + |
Preference number: 4 (lower is better) Translates to: STEVTECLKAISEPTWQTWKAEE*PRSLLV Trigger: GACAAGGAGAGATCGTGGCCACTCTTCTGCCTTCCA...AGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
||
CDS-3UTR CCA 90 bp | AGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTCCTGGGAAAGAATGTTaGTGCATTGCTGCAGGAGCG | + |
Preference number: 4 (lower is better) Translates to: STEVTECLKAISEPTWQTPGKEC*CIAAGA Trigger: CGCTCCTGCAGCAATGCACCAACATTCTTTCCCAGG...AGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | GAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAAGGGCACATAAGCCTTaGACCAACTGCTCTTCTTCT | + |
Preference number: 4 (lower is better) Translates to: EPQATLSTVLSLQGLISRRAHKP*TNCSSS Trigger: AGAAGAAGAGCAGTTGGTCCAAGGCTTATGTGCCCT...TCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
||
CDS-3UTR CCA 90 bp | GATGACATACAGGAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATGGCGATGGTGCTATTaGATGAGTCCAGCTGCTTTT | + |
Preference number: 4 (lower is better) Translates to: DDIQEPQATLSTVLSLQGWRWCY*MSPAAF Trigger: AAAAGCAGCTGGACTCATCCAATAGCACCATCGCCA...TCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTCCTGTATGTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
||
CDS-3UTR TCA 90 bp | GATGACATACAGGAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGAGCCTCGGATAACCTCTaGTACAGTATTTATGGTCTC | + |
Preference number: 4 (lower is better) Translates to: DDIQEPQATLSTVLSLQGASDNL*YSIYGL Trigger: GAGACCATAAATACTGTATCAGAGGTTATCCGAGGC...TCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTCCTGTATGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR TCA 90 bp | ACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTGCATTTGGCTGGGGTTTCTaGGACGCTCTGGAATATAAC | + |
Preference number: 4 (lower is better) Translates to: TEVTECLKAISEPTWQTAFGWGF*DALEYN Trigger: GTTATATTCCAGAGCGTCTCAGAAACCCCAGCCAAA...TGCAGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR TCA 90 bp | TTAATCAAATGTGTGAGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAAGAGATGCCTGCTGGGTaGCTGCTGTCTGTAGCTGCT | + |
Preference number: 4 (lower is better) Translates to: LIKCVSTEVTECLKAISEEMPAG*LLSVAA Trigger: AGCAGCTACAGACAGCAGTCACCCAGCAGGCATCTC...TTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACTCACACATTTGATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR TCA 90 bp | GAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGATGACCGAGATCCTTaGGTTTACTCTTCAGTGACA | + |
Preference number: 4 (lower is better) Translates to: EPQATLSTVLSLQGLISRDDRDP*VYSSVT Trigger: TGTCACTGAAGAGTAAACTCAAGGATCTCGGTCATC...TCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
||
CDS-3UTR CCA 90 bp | ACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTGCAAGGGCACATAAGCCTTaGACCAACTGCTCTTCTTCT | + |
Preference number: 4 (lower is better) Translates to: TEVTECLKAISEPTWQTARAHKP*TNCSSS Trigger: AGAAGAAGAGCAGTTGGTCCAAGGCTTATGTGCCCT...TGCAGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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CDS-3UTR TCA 90 bp | AGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTACATTGGCTGAGTTGTaGAGAAAATGTGTTACAGCA | + |
Preference number: 4 (lower is better) Translates to: SEPTWQTALPPHAFKGGTTLAEL*RKCVTA Trigger: TGCTGTAACACATTTTCTTCACAACTCAGCCAATGT...AGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR TCA 90 bp | GCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGATCTTCTTCAACTGGATaGCCGAGATCCTTGAGTTTA | + |
Preference number: 4 (lower is better) Translates to: APGYPKYSPFFTRINQPRSSSTG*PRSLSL Trigger: TAAACTCAAGGATCTCGGTCATCCAGTTGAAGAAGA...TCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | AAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAACTCAAACGCTGACTTGGAAGGCAGAAGAGTaGCCACGATCTCTCCTTGTC | + |
Preference number: 4 (lower is better) Translates to: KYSPFFTRINQPRTQTLTWKAEE*PRSLLV Trigger: GACAAGGAGAGATCGTGGCCACTCTTCTGCCTTCCA...AGTCAGCGTTTGAGTTCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | AGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTGTTTCTGAGACGCTCTaGAATATAACTCATGTTTGC | + |
Preference number: 4 (lower is better) Translates to: SEPTWQTALPPHAFKGGTVSETL*NITHVC Trigger: GCAAACATGAGTTATATTCCAGAGCGTCTCAGAAAC...AGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | AAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAACTCAAACGCTGACTTGGACTCGGAAAGTTTaGCTGGGGTTTCTGAGACGC | + |
Preference number: 4 (lower is better) Translates to: KYSPFFTRINQPRTQTLTWTRKV*LGFLRR Trigger: GCGTCTCAGAAACCCCAGCCAAACTTTCCGAGTCCA...AGTCAGCGTTTGAGTTCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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3UTR CAA 72 bp | TGTTCTTTCTTAGAATCCGTAACTTCCAAGTCCAGCTaGTCTTTCTCGGTTTGCAGGATGGCGATGGTGCTA | + |
Preference number: 4 (lower is better) Translates to: CSFLESVTSKSS*SFSVCRMAMVL Trigger: TAGCACCATCGCCATCCTGCAAACCGAGAAAGACAAGCTGGACTTGGAAGTTACGGATTCTAAGAAAGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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CDS-3UTR TCA 90 bp | AGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTATCCTAGTTTCTCTATaGAATTCTCTTTGCCAATCC | + |
Preference number: 4 (lower is better) Translates to: SEPTWQTALPPHAFKGGTILVSL*NSLCQS Trigger: GGATTGGCAAAGAGAATTTCATAGAGAAACTAGGAT...AGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | TCAGCCGAGAACTCAAACGCTGACTTAGAAATGATGACTCCCATTGAATACACACTCCTTGTTAATGCCTaGAGTAGTAAGACGCCATCG | + |
Preference number: 4 (lower is better) Translates to: SAENSNADLEMMTPIEYTLLVNA*SSKTPS Trigger: CGATGGCGTCTTACTACTGCAGGCATTAACAAGGAG...TGTGTATTCAATGGGAGTCATCATTTCTAAGTCAGCGTTTGAGTTCTCGGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | TCAGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTAAAAATTTCTGTAAACTaGCTTCCCAAATCCTCACTC | + |
Preference number: 4 (lower is better) Translates to: SVNQHGKLHCHHMPSKGVKISVN*LPKSSL Trigger: GAGTGAGGATTTGGGAAGCCAGTTTACAGAAATTTT...TACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | TTAATCAAATGTGTGAGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAGGCCAACGGACGTaGAAATCAAACTCCTCCAAC | + |
Preference number: 4 (lower is better) Translates to: LIKCVSTEVTECLKAISEPGQRT*KSNSSN Trigger: GTTGGAGGAGTTTGATTTCCACGTCCGTTGGCCTGG...TTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACTCACACATTTGATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | AGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTCTGATACAGTATTTATaGTCTCTGTCAGGATATCAG | + |
Preference number: 4 (lower is better) Translates to: SEPTWQTALPPHAFKGGTLIQYL*SLSGYQ Trigger: CTGATATCCTGACAGAGACCATAAATACTGTATCAG...AGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | GATGACATACAGGAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGAGTTTCTGAGACGCTCTaGAATATAACTCATGTTTGC | + |
Preference number: 4 (lower is better) Translates to: DDIQEPQATLSTVLSLQGVSETL*NITHVC Trigger: GCAAACATGAGTTATATTCCAGAGCGTCTCAGAAAC...TCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTCCTGTATGTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | TTAATCAAATGTGTGAGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAATGGACTCGGAAAGTTTaGCTGGGGTTTCTGAGACGC | + |
Preference number: 4 (lower is better) Translates to: LIKCVSTEVTECLKAISEWTRKV*LGFLRR Trigger: GCGTCTCAGAAACCCCAGCCAAACTTTCCGAGTCCA...TTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACTCACACATTTGATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | TCAGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTAAAATATCATATACTCTaGACTCGGAAAGTTTGGCTG | + |
Preference number: 4 (lower is better) Translates to: SVNQHGKLHCHHMPSKGVKYHIL*TRKVWL Trigger: CAGCCAAACTTTCCGAGTCCAGAGTATATGATATTT...TACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR TCA 90 bp | ACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTGCAACATTGGCTGAGTTGTaGAGAAAATGTGTTACAGCA | + |
Preference number: 4 (lower is better) Translates to: TEVTECLKAISEPTWQTATLAEL*RKCVTA Trigger: TGCTGTAACACATTTTCTTCACAACTCAGCCAATGT...TGCAGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR TCA 90 bp | GAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAATCGTTGAAATAAATTaGAATGCCCAAAAGAAGGGC | + |
Preference number: 4 (lower is better) Translates to: EPQATLSTVLSLQGLISRIVEIN*NAQKKG Trigger: GCCCTTCTTTTGGGCATTTCAATTTATTTCAACGAT...TCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | GAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGACAAACCAAGGTTTCATaGGTTGAATATAAGAGCCTT | + |
Preference number: 4 (lower is better) Translates to: EPQATLSTVLSLQGLISRQTKVS*VEYKSL Trigger: AAGGCTCTTATATTCAACGCATGAAACCTTGGTTTG...TCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | GATGACATACAGGAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGAACGATGTTATCATGCTaGTCTAAGGTTTTCTTTACC | + |
Preference number: 4 (lower is better) Translates to: DDIQEPQATLSTVLSLQGTMLSC*SKVFFT Trigger: GGTAAAGAAAACCTTAGAGCAGCATGATAACATCGT...TCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTCCTGTATGTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | AAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAACTCAAACGCTGACTAACTCTTTGGTCTCCTaGAGCAAAGCAGACAGCCTT | + |
Preference number: 4 (lower is better) Translates to: KYSPFFTRINQPRTQTLTNSLVS*SKADSL Trigger: AAGGCTGTCTGCTTTGCTGCAGGAGACCAAAGAGTT...AGTCAGCGTTTGAGTTCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | GAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAAAAGCAACAATTTTCTaGATTGCTCCATTGCTCCTT | + |
Preference number: 4 (lower is better) Translates to: EPQATLSTVLSLQGLISRKATIF*IAPLLL Trigger: AAGGAGCAATGGAGCAATCCAGAAAATTGTTGCTTT...TCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | GAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAAAATATCATATACTCTaGACTCGGAAAGTTTGGCTG | + |
Preference number: 4 (lower is better) Translates to: EPQATLSTVLSLQGLISRKYHIL*TRKVWL Trigger: CAGCCAAACTTTCCGAGTCCAGAGTATATGATATTT...TCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | AGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTCATTCTTTAACTCTTTaGTCTCCTGCAGCAAAGCAG | + |
Preference number: 4 (lower is better) Translates to: STEVTECLKAISEPTWQTHSLTL*SPAAKQ Trigger: CTGCTTTGCTGCAGGAGACCAAAGAGTTAAAGAATG...AGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR TCA 90 bp | AAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAACTCAAACGCTGACTGATGACCGAGATCCTTaGGTTTACTCTTCAGTGACA | + |
Preference number: 4 (lower is better) Translates to: KYSPFFTRINQPRTQTLTDDRDP*VYSSVT Trigger: TGTCACTGAAGAGTAAACTCAAGGATCTCGGTCATC...AGTCAGCGTTTGAGTTCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | TTAATCAAATGTGTGAGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACTCCTTGTTAATGCCTaGAGTAGTAAGACGCCATCG | + |
Preference number: 4 (lower is better) Translates to: LIKCVSTEVTECLKAISELLVNA*SSKTPS Trigger: CGATGGCGTCTTACTACTGCAGGCATTAACAAGGAG...TTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACTCACACATTTGATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | ACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTGCAGTCACGATGTTATCATaGTGCTCTAAGGTTTTCTTT | + |
Preference number: 4 (lower is better) Translates to: TEVTECLKAISEPTWQTAVTMLS*CSKVFF Trigger: AAAGAAAACCTTAGAGCAGCATGATAACATCGTGAC...TGCAGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CCA 90 bp | TCAGCCGAGAACTCAAACGCTGACTTAGAAATGATGACTCCCATTGAATACACACATTCTTTAACTCTTTaGTCTCCTGCAGCAAAGCAG | + |
Preference number: 4 (lower is better) Translates to: SAENSNADLEMMTPIEYTHSLTL*SPAAKQ Trigger: CTGCTTTGCTGCAGGAGACCAAAGAGTTAAAGAATG...TGTGTATTCAATGGGAGTCATCATTTCTAAGTCAGCGTTTGAGTTCTCGGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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3UTR CAA 72 bp | CATGATCAAATATCATATACTCTGGACTCGGAAAGTTaGGCTGGGGTTTCTGAGACGCTCTGGAATATAACT | + |
Preference number: 4 (lower is better) Translates to: HDQISYTLDSES*AGVSETLWNIT Trigger: AGTTATATTCCAGAGCGTCTCAGAAACCCCAGCCAAACTTTCCGAGTCCAGAGTATATGATATTTGATCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201642.2 |
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CDS-3UTR TCA 90 bp | AAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAACTCAAACGCTGACTATCGTTGAAATAAATTaGAATGCCCAAAAGAAGGGC | + |
Preference number: 4 (lower is better) Translates to: KYSPFFTRINQPRTQTLTIVEIN*NAQKKG Trigger: GCCCTTCTTTTGGGCATTTCAATTTATTTCAACGAT...AGTCAGCGTTTGAGTTCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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CDS-3UTR GCA 90 bp | TTAATCAAATGTGTGAGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAATTCTCCGAGATTTTCTaGAATCTGTCCTGTAAGGAA | + |
Preference number: 4 (lower is better) Translates to: LIKCVSTEVTECLKAISEFSEIF*NLSCKE Trigger: TTCCTTACAGGACAGATTGCAGAAAATCTCGGAGAA...TTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACTCACACATTTGATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS TCA 90 bp | GGAGCGACACCGGAGGGTTGCCGATGCTGGTGGCCAGCTGAACCCTaGGCAGTTGCTCTTTCTGGGTGGCATTTCCCTGCAGCGCATGGG | + |
Preference number: 5 (lower is better) Translates to: GATPEGCRCWWPAEP*AVALSGWHFPAAHG Trigger: CCCATGCGCTGCAGGGAAATGCCACCCAGAAAGAGCAACTGCTCAGGGTTCAGCTGGCCACCAGCATCGGCAACCCTCCGGTGTCGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GGGACAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACGTAGCACCGGGAGGGTaGGTGGGAGATACCAGTACC | + |
Preference number: 5 (lower is better) Translates to: GTIFPLSRQNVAPLDGKHVAPGG*VGDTST Trigger: GGTACTGGTATCTCCCACCAACCCTCCCGGTGCTAC...GTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GGCCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGACTGAACCCTGAGCAGTaGCTCTTTCTGGGTGGCATT | + |
Preference number: 5 (lower is better) Translates to: GPAGRQALTRNCPILISGLNPEQ*LFLGGI Trigger: AATGCCACCCAGAAAGAGCAACTGCTCAGGGTTCAG...TCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS GCA 90 bp | CCCATGGGGCTGACTAGGATGATCTGCTGCACGGGAGGCCCTAGCTaGTTTAAAAGAGAAGTCAGGAGTCTCACGCCAGGCCAACGGACG | + |
Preference number: 5 (lower is better) Translates to: PMGLTRMICCTGGPS*FKREVRSLTPGQRT Trigger: CGTCCGTTGGCCTGGCGTGAGACTCCTGACTTCTCTTTTAAAGCAGCTAGGGCCTCCCGTGCAGCAGATCATCCTAGTCAGCCCCATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CCA 90 bp | CCAGTAGCCATCAGGATAGTGCAAAGCTGCTGGAGTAGCCCACACTaGAACATGGCCTTCTGGCAGCTACTGGTAGCACCGGGAGGGTTG | + |
Preference number: 5 (lower is better) Translates to: PVAIRIVQSCWSSPH*NMAFWQLLVAPGGL Trigger: CAACCCTCCCGGTGCTACCAGTAGCTGCCAGAAGGCCATGTTCCAGTGTGGGCTACTCCAGCAGCTTTGCACTATCCTGATGGCTACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CCA 90 bp | ACCCTGAGCAGTTGCTCTTTCTGGGTGGCATTTCCCTGCAGCGCATaGGCGAGGGCCACAGCAGCACACCAGTTAGAGAGAGAGTCTGTA | + |
Preference number: 5 (lower is better) Translates to: TLSSCSFWVAFPCSA*ARATAAHQLERESV Trigger: TACAGACTCTCTCTCTAACTGGTGTGCTGCTGTGGCCCTCGCCCATGCGCTGCAGGGAAATGCCACCCAGAAAGAGCAACTGCTCAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | TCAGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTAAGCGACACCGGAGGGTaGCCGATGCTGGTGGCCAGC | + |
Preference number: 5 (lower is better) Translates to: SVNQHGKLHCHHMPSKGVSDTGG*PMLVAS Trigger: GCTGGCCACCAGCATCGGCAACCCTCCGGTGTCGCT...TACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GGGACAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACCTGGACTCGGAAAGTTaGGCTGGGGTTTCTGAGACG | + |
Preference number: 5 (lower is better) Translates to: GTIFPLSRQNVAPLDGKHLDSES*AGVSET Trigger: CGTCTCAGAAACCCCAGCCAAACTTTCCGAGTCCAG...GTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GGCCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGATCATTCTTTAACTCTTaGGTCTCCTGCAGCAAAGCA | + |
Preference number: 5 (lower is better) Translates to: GPAGRQALTRNCPILISGSFFNS*VSCSKA Trigger: TGCTTTGCTGCAGGAGACCAAAGAGTTAAAGAATGA...TCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | CAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACTCACCTTGTCTTTCTCGGTTaGCAGGATGGCGATGGTGCT | + |
Preference number: 5 (lower is better) Translates to: QSFLSVGRMWPRWTASTHLVFLG*QDGDGA Trigger: AGCACCATCGCCATCCTGCAAACCGAGAAAGACAAG...GTGAGTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | CTGGGACAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACTTCCAAGTCCAGCTaGTCTTTCTCGGTTTGCAGG | + |
Preference number: 5 (lower is better) Translates to: LGQSFLSVGRMWPRWTASTSKSS*SFSVCR Trigger: CCTGCAAACCGAGAAAGACAAGCTGGACTTGGAAGT...GCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTGTCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GGCCCCGCTGGACGGCAAGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGACACCAAAAGGTCATCTaGTTCTTTCTTAGAATCCGT | + |
Preference number: 5 (lower is better) Translates to: GPAGRQALTRNCPILISGHQKVI*FFLRIR Trigger: ACGGATTCTAAGAAAGAACAAGATGACCTTTTGGTG...TCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCTTGCCGTCCAGCGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS GCA 90 bp | AGGATATCAGCAGGAATCCCAGTAGCCATCAGGATAGTGCAAAGCTaGTGGAGTAGCCCACACTGGAACATGGCCTTCTGGCAGCTACTG | + |
Preference number: 5 (lower is better) Translates to: RISAGIPVAIRIVQS*WSSPHWNMAFWQLL Trigger: CAGTAGCTGCCAGAAGGCCATGTTCCAGTGTGGGCTACTCCAGCAGCTTTGCACTATCCTGATGGCTACTGGGATTCCTGCTGATATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAGTAGCACCGGGAGGGTaGGTGGGAGATACCAGTACC | + |
Preference number: 5 (lower is better) Translates to: APGYPKYSPFFTRINQPRVAPGG*VGDTST Trigger: GGTACTGGTATCTCCCACCAACCCTCCCGGTGCTAC...TCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CCA 90 bp | ATATCAGCAGGAATCCCAGTAGCCATCAGGATAGTGCAAAGCTGCTaGAGTAGCCCACACTGGAACATGGCCTTCTGGCAGCTACTGGTA | + |
Preference number: 5 (lower is better) Translates to: ISAGIPVAIRIVQSC*SSPHWNMAFWQLLV Trigger: TACCAGTAGCTGCCAGAAGGCCATGTTCCAGTGTGGGCTACTCCAGCAGCTTTGCACTATCCTGATGGCTACTGGGATTCCTGCTGATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | AGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTAAGAATGTTGGTGCATaGCTGCAGGAGCGACACCGG | + |
Preference number: 5 (lower is better) Translates to: SEPTWQTALPPHAFKGGTKNVGA*LQERHR Trigger: CCGGTGTCGCTCCTGCAGCAATGCACCAACATTCTT...AGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | CTGGGACAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCTTAACAACCCGACTCTaGTCTGTATTTTGCTTCCCT | + |
Preference number: 5 (lower is better) Translates to: LGQSFLSVGRMWPRWTASLTTRL*SVFCFP Trigger: AGGGAAGCAAAATACAGACAAGAGTCGGGTTGTTAA...GCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTGTCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS TCA 90 bp | GAGAGAGTCTGTAGAAAACAAACCTCCGCAGAGCAGCTGACCGGCTaGGACGGAGTTACCTGTTGCATCAATAGTGGAAGGCAGAAGAGT | + |
Preference number: 5 (lower is better) Translates to: ERVCRKQTSAEQLTG*DGVTCCINSGRQKS Trigger: ACTCTTCTGCCTTCCACTATTGATGCAACAGGTAACTCCGTCTCAGCCGGTCAGCTGCTCTGCGGAGGTTTGTTTTCTACAGACTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS TCA 90 bp | CAGTTAGAGAGAGAGTCTGTAGAAAACAAACCTCCGCAGAGCAGCTaGCCGGCTGAGACGGAGTTACCTGTTGCATCAATAGTGGAAGGC | + |
Preference number: 5 (lower is better) Translates to: QLERESVENKPPQSS*PAETELPVASIVEG Trigger: GCCTTCCACTATTGATGCAACAGGTAACTCCGTCTCAGCCGGTCAGCTGCTCTGCGGAGGTTTGTTTTCTACAGACTCTCTCTCTAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CCA 90 bp | CAGAGCAACATTAACAACCCGACTCTTGTCTGTATTTTGCTTCCCTaGGAAAGAATGTTGGTGCATTGCTGCAGGAGCGACACCGGAGGG | + |
Preference number: 5 (lower is better) Translates to: QSNINNPTLVCILLP*ERMLVHCCRSDTGG Trigger: CCCTCCGGTGTCGCTCCTGCAGCAATGCACCAACATTCTTTCCCAGGGAAGCAAAATACAGACAAGAGTCGGGTTGTTAATGTTGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | CTGGGACAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCCCAAGGTTTCATGCGTaGAATATAAGAGCCTTCTTT | + |
Preference number: 5 (lower is better) Translates to: LGQSFLSVGRMWPRWTASPRFHA*NIRAFF Trigger: AAAGAAGGCTCTTATATTCAACGCATGAAACCTTGG...GCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTGTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | AGCACTCACTCGGAACTGTCCCATCCTGATCTCGGGAGGCACAGTGGGGGTTTGAGCATTAAATGTAGATaGGTCACTTTCTGTGCTGAC | + |
Preference number: 5 (lower is better) Translates to: STHSELSHPDLGRHSGGLSIKCR*VTFCAD Trigger: GTCAGCACAGAAAGTGACCAATCTACATTTAATGCT...CAAACCCCCACTGTGCCTCCCGAGATCAGGATGGGACAGTTCCGAGTGAGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | TTAATCAAATGTGTGAGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAAAGCGACACCGGAGGGTaGCCGATGCTGGTGGCCAGC | + |
Preference number: 5 (lower is better) Translates to: LIKCVSTEVTECLKAISESDTGG*PMLVAS Trigger: GCTGGCCACCAGCATCGGCAACCCTCCGGTGTCGCT...TTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACTCACACATTTGATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GATGACATACAGGAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGAAAGAATGTTGGTGCATaGCTGCAGGAGCGACACCGG | + |
Preference number: 5 (lower is better) Translates to: DDIQEPQATLSTVLSLQGKNVGA*LQERHR Trigger: CCGGTGTCGCTCCTGCAGCAATGCACCAACATTCTT...TCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTCCTGTATGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | AGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTCTTGTCTTTCTCGGTTaGCAGGATGGCGATGGTGCT | + |
Preference number: 5 (lower is better) Translates to: SEPTWQTALPPHAFKGGTLVFLG*QDGDGA Trigger: AGCACCATCGCCATCCTGCAAACCGAGAAAGACAAG...AGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | CAATCTTTCCTCTCAGTAGGCAGAATGTGGCCCCGCTGGACGGCAAGCACTCACATCATCATCGTCTTCTaGGTCTCCAGATTCATCTTC | + |
Preference number: 5 (lower is better) Translates to: QSFLSVGRMWPRWTASTHIIIVF*VSRFIF Trigger: GAAGATGAATCTGGAGACCAAGAAGACGATGATGAT...GTGAGTGCTTGCCGTCCAGCGGGGCCACATTCTGCCTACTGAGAGGAAAGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS GCA 90 bp | TCCATTAATCTTGAAACACCCATGGGGCTGACTAGGATGATCTGCTaGACGGGAGGCCCTAGCTGCTTTAAAAGAGAAGTCAGGAGTCTC | + |
Preference number: 5 (lower is better) Translates to: SINLETPMGLTRMIC*TGGPSCFKREVRSL Trigger: GAGACTCCTGACTTCTCTTTTAAAGCAGCTAGGGCCTCCCGTGCAGCAGATCATCCTAGTCAGCCCCATGGGTGTTTCAAGATTAATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | AGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTACTTCCAAGTCCAGCTaGTCTTTCTCGGTTTGCAGG | + |
Preference number: 5 (lower is better) Translates to: SEPTWQTALPPHAFKGGTTSKSS*SFSVCR Trigger: CCTGCAAACCGAGAAAGACAAGCTGGACTTGGAAGT...AGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS GCA 90 bp | AAGTCCATTAATCTTGAAACACCCATGGGGCTGACTAGGATGATCTaGTGCACGGGAGGCCCTAGCTGCTTTAAAAGAGAAGTCAGGAGT | + |
Preference number: 5 (lower is better) Translates to: KSINLETPMGLTRMI*CTGGPSCFKREVRS Trigger: ACTCCTGACTTCTCTTTTAAAGCAGCTAGGGCCTCCCGTGCAGCAGATCATCCTAGTCAGCCCCATGGGTGTTTCAAGATTAATGGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS GCA 90 bp | GCCAGGTACAGAGCAACATTAACAACCCGACTCTTGTCTGTATTTTaGTTCCCTGGGAAAGAATGTTGGTGCATTGCTGCAGGAGCGACA | + |
Preference number: 5 (lower is better) Translates to: ARYRATLTTRLLSVF*FPGKECWCIAAGAT Trigger: TGTCGCTCCTGCAGCAATGCACCAACATTCTTTCCCAGGGAAGCAAAATACAGACAAGAGTCGGGTTGTTAATGTTGCTCTGTACCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAGTAGTCTTGGTTTACTaGGCAGCCTCGGATAACCTC | + |
Preference number: 5 (lower is better) Translates to: APGYPKYSPFFTRINQPRVVLVY*AASDNL Trigger: GAGGTTATCCGAGGCTGCCAAGTAAACCAAGACTAC...TCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | TCAGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTAAGAAGCAAAGTAGTCTaGGTTTACTTGGCAGCCTCG | + |
Preference number: 5 (lower is better) Translates to: SVNQHGKLHCHHMPSKGVRSKVV*VYLAAS Trigger: CGAGGCTGCCAAGTAAACCAAGACTACTTTGCTTCT...TACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAACAGCAATAGGACAGTaGCTTAGCCAGGTACAGAGC | + |
Preference number: 5 (lower is better) Translates to: APGYPKYSPFFTRINQPRTAIGQ*LSQVQS Trigger: GCTCTGTACCTGGCTAAGCAACTGTCCTATTGCTGT...TCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAGTCACCGTGGGAACCTaGATGGTGATTGTCTTTTCC | + |
Preference number: 5 (lower is better) Translates to: APGYPKYSPFFTRINQPRVTVGT*MVIVFS Trigger: GGAAAAGACAATCACCATCAAGGTTCCCACGGTGAC...TCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGATTCTGGATTGCTCCATaGCTCCTTGTTAATGCCTGC | + |
Preference number: 5 (lower is better) Translates to: EPQATLSTVLSLQGLISRFWIAP*LLVNAC Trigger: GCAGGCATTAACAAGGAGCAATGGAGCAATCCAGAA...TCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAAGAAGCAAAGTAGTCTaGGTTTACTTGGCAGCCTCG | + |
Preference number: 5 (lower is better) Translates to: APGYPKYSPFFTRINQPRRSKVV*VYLAAS Trigger: CGAGGCTGCCAAGTAAACCAAGACTACTTTGCTTCT...TCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS GCA 90 bp | GCAGACAGCCTTCCTTCTACATCCGTGGTCTTAGCAGCACTCACATaGTCACTCTCTCCTTCTACAGGAACTGATTTTGCCAAATTTTCA | + |
Preference number: 5 (lower is better) Translates to: ADSLPSTSVVLAALT*SLSPSTGTDFAKFS Trigger: TGAAAATTTGGCAAAATCAGTTCCTGTAGAAGGAGAGAGTGAGCATGTGAGTGCTGCTAAGACCACGGATGTAGAAGGAAGGCTGTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202155.2 |
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CDS CCA 90 bp | TGGGAGATACCAGTACCCGCACAAGCTGGAGCATTAAATGTAGATTaGTCACTTTCTGTGCTGACCAACCAGAGTTTTCCTCTCCAACTT | + |
Preference number: 5 (lower is better) Translates to: WEIPVPAQAGALNVD*SLSVLTNQSFPLQL Trigger: AAGTTGGAGAGGAAAACTCTGGTTGGTCAGCACAGAAAGTGACCAATCTACATTTAATGCTCCAGCTTGTGCGGGTACTGGTATCTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGATTGCTCCATTGCTCCTaGTTAATGCCTGCAGTAGTA | + |
Preference number: 5 (lower is better) Translates to: EPQATLSTVLSLQGLISRLLHCS*LMPAVV Trigger: TACTACTGCAGGCATTAACAAGGAGCAATGGAGCAA...TCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | TCAGCCGAGAACTCAAACGCTGACTTAGAAATGATGACTCCCATTGAATACACACTGAACCCTGAGCAGTaGCTCTTTCTGGGTGGCATT | + |
Preference number: 5 (lower is better) Translates to: SAENSNADLEMMTPIEYTLNPEQ*LFLGGI Trigger: AATGCCACCCAGAAAGAGCAACTGCTCAGGGTTCAG...TGTGTATTCAATGGGAGTCATCATTTCTAAGTCAGCGTTTGAGTTCTCGGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | AGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTACAGCAATAGGACAGTaGCTTAGCCAGGTACAGAGC | + |
Preference number: 5 (lower is better) Translates to: STEVTECLKAISEPTWQTTAIGQ*LSQVQS Trigger: GCTCTGTACCTGGCTAAGCAACTGTCCTATTGCTGT...AGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | AGTGAACCAACATGGCAAACTGCATTGCCACCACATGCCTTCAAAGGGGGTACTAGCATTAAATGTAGATaGGTCACTTTCTGTGCTGAC | + |
Preference number: 5 (lower is better) Translates to: SEPTWQTALPPHAFKGGTSIKCR*VTFCAD Trigger: GTCAGCACAGAAAGTGACCAATCTACATTTAATGCT...AGTACCCCCTTTGAAGGCATGTGGTGGCAATGCAGTTTGCCATGTTGGTTCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | TCAGCCGAGAACTCAAACGCTGACTTAGAAATGATGACTCCCATTGAATACACAGTAGTCTTGGTTTACTaGGCAGCCTCGGATAACCTC | + |
Preference number: 5 (lower is better) Translates to: SAENSNADLEMMTPIEYTVVLVY*AASDNL Trigger: GAGGTTATCCGAGGCTGCCAAGTAAACCAAGACTAC...TGTGTATTCAATGGGAGTCATCATTTCTAAGTCAGCGTTTGAGTTCTCGGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGATTAACAACCCGACTCTaGTCTGTATTTTGCTTCCCT | + |
Preference number: 5 (lower is better) Translates to: APGYPKYSPFFTRINQPRLTTRL*SVFCFP Trigger: AGGGAAGCAAAATACAGACAAGAGTCGGGTTGTTAA...TCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | TCAGCCGAGAACTCAAACGCTGACTTAGAAATGATGACTCCCATTGAATACACAGTCACCGTGGGAACCTaGATGGTGATTGTCTTTTCC | + |
Preference number: 5 (lower is better) Translates to: SAENSNADLEMMTPIEYTVTVGT*MVIVFS Trigger: GGAAAAGACAATCACCATCAAGGTTCCCACGGTGAC...TGTGTATTCAATGGGAGTCATCATTTCTAAGTCAGCGTTTGAGTTCTCGGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GATGACATACAGGAGCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATCATTCTTTAACTCTTaGGTCTCCTGCAGCAAAGCA | + |
Preference number: 5 (lower is better) Translates to: DDIQEPQATLSTVLSLQGSFFNS*VSCSKA Trigger: TGCTTTGCTGCAGGAGACCAAAGAGTTAAAGAATGA...TCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGCTCCTGTATGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | TCAGCCGAGAACTCAAACGCTGACTTAGAAATGATGACTCCCATTGAATACACATTCTGGATTGCTCCATaGCTCCTTGTTAATGCCTGC | + |
Preference number: 5 (lower is better) Translates to: SAENSNADLEMMTPIEYTFWIAP*LLVNAC Trigger: GCAGGCATTAACAAGGAGCAATGGAGCAATCCAGAA...TGTGTATTCAATGGGAGTCATCATTTCTAAGTCAGCGTTTGAGTTCTCGGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | GCCCCAGGCTACCCTAAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGACCAAGGTTTCATGCGTaGAATATAAGAGCCTTCTTT | + |
Preference number: 5 (lower is better) Translates to: APGYPKYSPFFTRINQPRPRFHA*NIRAFF Trigger: AAAGAAGGCTCTTATATTCAACGCATGAAACCTTGG...TCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTTAGGGTAGCCTGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | TCAGCCGAGAACTCAAACGCTGACTTAGAAATGATGACTCCCATTGAATACACATTGCTCCATTGCTCCTaGTTAATGCCTGCAGTAGTA | + |
Preference number: 5 (lower is better) Translates to: SAENSNADLEMMTPIEYTLLHCS*LMPAVV Trigger: TACTACTGCAGGCATTAACAAGGAGCAATGGAGCAA...TGTGTATTCAATGGGAGTCATCATTTCTAAGTCAGCGTTTGAGTTCTCGGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | TTAATCAAATGTGTGAGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACTACAGGAACTGATTTaGCCAAGGTCTCTGCTCTCT | + |
Preference number: 5 (lower is better) Translates to: LIKCVSTEVTECLKAISELQELI*PRSLLS Trigger: AGAGAGCAGAGACCTTGGCAAAATCAGTTCCTGTAG...TTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACTCACACATTTGATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031355.10 |
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CDS-3UTR CAA 90 bp | AGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACCAACATGGCAAACTCACCAAAAGGTCATCTaGTTCTTTCTTAGAATCCGT | + |
Preference number: 5 (lower is better) Translates to: STEVTECLKAISEPTWQTHQKVI*FFLRIR Trigger: ACGGATTCTAAGAAAGAACAAGATGACCTTTTGGTG...AGTTTGCCATGTTGGTTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS TCA 90 bp | TTTTCTGCAATCTGTCCTGTAAGGAATGGAACATTGGCTGAGTTGTaGAGAAAATGTGTTACAGCAATAGGACAGTTGCTTAGCCAGGTA | + |
Preference number: 5 (lower is better) Translates to: FSAICPVRNGTLAEL*RKCVTAIGQLLSQV Trigger: TACCTGGCTAAGCAACTGTCCTATTGCTGTAACACATTTTCTTCACAACTCAGCCAATGTTCCATTCCTTACAGGACAGATTGCAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS GCA 90 bp | AAAGCAACAATTTTCTGGATTGCTCCATTGCTCCTTGTTAATGCCTaGAGTAGTAAGACGCCATCGTTGCGTATAATTTCTCTGGAATCT | + |
Preference number: 5 (lower is better) Translates to: KATIFWIAPLLLVNA*SSKTPSLRIISLES Trigger: AGATTCCAGAGAAATTATACGCAACGATGGCGTCTTACTACTGCAGGCATTAACAAGGAGCAATGGAGCAATCCAGAAAATTGTTGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | AAGTACAGTCCTTTCTTTACAAGGATTAATCAGCCGAGAACTCAAACGCTGACTATCATCATCGTCTTCTaGGTCTCCAGATTCATCTTC | + |
Preference number: 5 (lower is better) Translates to: KYSPFFTRINQPRTQTLTIIIVF*VSRFIF Trigger: GAAGATGAATCTGGAGACCAAGAAGACGATGATGAT...AGTCAGCGTTTGAGTTCTCGGCTGATTAATCCTTGTAAAGAAAGGACTGTACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CCA 90 bp | TCCGAACGATCTGTTTGTAAAACATGGATAAGATGTTCCATAGCTTaGATTCCCACTTCTAAGCGGTATTTCTTAGAGAGTGATTTAAGG | + |
Preference number: 5 (lower is better) Translates to: SERSVCKTWIRCSIA*IPTSKRYFLESDLR Trigger: CCTTAAATCACTCTCTAAGAAATACCGCTTAGAAGTGGGAATCCAAGCTATGGAACATCTTATCCATGTTTTACAAACAGATCGTTCGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS-3UTR CAA 90 bp | TTAATCAAATGTGTGAGTACTGAAGTCACAGAGTGTCTGAAAGCCATCAGTGAACAACAATTTTCTGGATaGCTCCATTGCTCCTTGTTA | + |
Preference number: 5 (lower is better) Translates to: LIKCVSTEVTECLKAISEQQFSG*LHCSLL Trigger: TAACAAGGAGCAATGGAGCAATCCAGAAAATTGTTG...TTCACTGATGGCTTTCAGACACTCTGTGACTTCAGTACTCACACATTTGATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CCA 90 bp | GCATATGCTATTATTTCAGAATCCGAACGATCTGTTTGTAAAACATaGATAAGATGTTCCATAGCTTGGATTCCCACTTCTAAGCGGTAT | + |
Preference number: 5 (lower is better) Translates to: AYAIISESERSVCKT*IRCSIAWIPTSKRY Trigger: ATACCGCTTAGAAGTGGGAATCCAAGCTATGGAACATCTTATCCATGTTTTACAAACAGATCGTTCGGATTCTGAAATAATAGCATATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CAA 90 bp | CACCGGAGGGTTGCCGATGCTGGTGGCCAGCTGAACCCTGAGCAGTaGCTCTTTCTGGGTGGCATTTCCCTGCAGCGCATGGGCGAGGGC | + |
Preference number: 6 (lower is better) Translates to: HRRVADAGGQLNPEQ*LFLGGISLQRMGEG Trigger: GCCCTCGCCCATGCGCTGCAGGGAAATGCCACCCAGAAAGAGCAACTGCTCAGGGTTCAGCTGGCCACCAGCATCGGCAACCCTCCGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS TCA 72 bp | CCGGAGGGTTGCCGATGCTGGTGGCCAGCTGAACCCTaGGCAGTTGCTCTTTCTGGGTGGCATTTCCCTGCA | + |
Preference number: 6 (lower is better) Translates to: PEGCRCWWPAEP*AVALSGWHFPA Trigger: TGCAGGGAAATGCCACCCAGAAAGAGCAACTGCTCAGGGTTCAGCTGGCCACCAGCATCGGCAACCCTCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CAA 72 bp | GTTGCCGATGCTGGTGGCCAGCTGAACCCTGAGCAGTaGCTCTTTCTGGGTGGCATTTCCCTGCAGCGCATG | + |
Preference number: 6 (lower is better) Translates to: VADAGGQLNPEQ*LFLGGISLQRM Trigger: CATGCGCTGCAGGGAAATGCCACCCAGAAAGAGCAACTGCTCAGGGTTCAGCTGGCCACCAGCATCGGCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CCA 72 bp | AGTTGCTCTTTCTGGGTGGCATTTCCCTGCAGCGCATaGGCGAGGGCCACAGCAGCACACCAGTTAGAGAGA | + |
Preference number: 6 (lower is better) Translates to: SCSFWVAFPCSA*ARATAAHQLER Trigger: TCTCTCTAACTGGTGTGCTGCTGTGGCCCTCGCCCATGCGCTGCAGGGAAATGCCACCCAGAAAGAGCAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CAA 72 bp | AGCACGGCACATCGCAGCACAAACGGCTGCCGCTCGTaGACCATGGACATGAGCAGCACAACAATTGCCGGT | + |
Preference number: 6 (lower is better) Translates to: STAHRSTNGCRS*TMDMSSTTIAG Trigger: ACCGGCAATTGTTGTGCTGCTCATGTCCATGGTCAACGAGCGGCAGCCGTTTGTGCTGCGATGTGCCGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS TCA 72 bp | AGTAACGTAGAGGAAGCTACGCGGTCACAGAGCTTCTaGATCGTCTCGGCTTCAGTGTGCTGGGGTCCGGCA | + |
Preference number: 6 (lower is better) Translates to: SNVEEATRSQSF*IVSASVCWGPA Trigger: TGCCGGACCCCAGCACACTGAAGCCGAGACGATTCAGAAGCTCTGTGACCGCGTAGCTTCCTCTACGTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031355.10 ENSMUST00000201642.2 ENSMUST00000202155.2 |
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CDS GCA 72 bp | CTGACTAGGATGATCTGCTGCACGGGAGGCCCTAGCTaGTTTAAAAGAGAAGTCAGGAGTCTCACGCCAGGC | + |
Preference number: 6 (lower is better) Translates to: LTRMICCTGGPS*FKREVRSLTPG Trigger: GCCTGGCGTGAGACTCCTGACTTCTCTTTTAAAGCAGCTAGGGCCTCCCGTGCAGCAGATCATCCTAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS GCA 72 bp | GCAGGAATCCCAGTAGCCATCAGGATAGTGCAAAGCTaGTGGAGTAGCCCACACTGGAACATGGCCTTCTGG | + |
Preference number: 6 (lower is better) Translates to: AGIPVAIRIVQS*WSSPHWNMAFW Trigger: CCAGAAGGCCATGTTCCAGTGTGGGCTACTCCAGCAGCTTTGCACTATCCTGATGGCTACTGGGATTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CCA 72 bp | ATCAGGATAGTGCAAAGCTGCTGGAGTAGCCCACACTaGAACATGGCCTTCTGGCAGCTACTGGTAGCACCG | + |
Preference number: 6 (lower is better) Translates to: IRIVQSCWSSPH*NMAFWQLLVAP Trigger: CGGTGCTACCAGTAGCTGCCAGAAGGCCATGTTCCAGTGTGGGCTACTCCAGCAGCTTTGCACTATCCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS GCA 72 bp | TGTATTTTGCTTCCCTGGGAAAGAATGTTGGTGCATTaGTGCAGGAGCGACACCGGAGGGTTGCCGATGCTG | + |
Preference number: 6 (lower is better) Translates to: CILLPWERMLVH*CRSDTGGLPML Trigger: CAGCATCGGCAACCCTCCGGTGTCGCTCCTGCAGCAATGCACCAACATTCTTTCCCAGGGAAGCAAAATACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CAA 72 bp | CTGTATTTTGCTTCCCTGGGAAAGAATGTTGGTGCATaGCTGCAGGAGCGACACCGGAGGGTTGCCGATGCT | + |
Preference number: 6 (lower is better) Translates to: LYFASLGKNVGA*LQERHRRVADA Trigger: AGCATCGGCAACCCTCCGGTGTCGCTCCTGCAGCAATGCACCAACATTCTTTCCCAGGGAAGCAAAATACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS GCA 72 bp | CTTGAAACACCCATGGGGCTGACTAGGATGATCTGCTaGACGGGAGGCCCTAGCTGCTTTAAAAGAGAAGTC | + |
Preference number: 6 (lower is better) Translates to: LETPMGLTRMIC*TGGPSCFKREV Trigger: GACTTCTCTTTTAAAGCAGCTAGGGCCTCCCGTGCAGCAGATCATCCTAGTCAGCCCCATGGGTGTTTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CCA 72 bp | CTCTTGTCTGTATTTTGCTTCCCTGGGAAAGAATGTTaGTGCATTGCTGCAGGAGCGACACCGGAGGGTTGC | + |
Preference number: 6 (lower is better) Translates to: LLSVFCFPGKEC*CIAAGATPEGC Trigger: GCAACCCTCCGGTGTCGCTCCTGCAGCAATGCACCAACATTCTTTCCCAGGGAAGCAAAATACAGACAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS TCA 72 bp | TGTAGAAAACAAACCTCCGCAGAGCAGCTGACCGGCTaGGACGGAGTTACCTGTTGCATCAATAGTGGAAGG | + |
Preference number: 6 (lower is better) Translates to: CRKQTSAEQLTG*DGVTCCINSGR Trigger: CCTTCCACTATTGATGCAACAGGTAACTCCGTCTCAGCCGGTCAGCTGCTCTGCGGAGGTTTGTTTTCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CAA 72 bp | ACTCTTGTCTGTATTTTGCTTCCCTGGGAAAGAATGTaGGTGCATTGCTGCAGGAGCGACACCGGAGGGTTG | + |
Preference number: 6 (lower is better) Translates to: TLVCILLPWERM*VHCCRSDTGGL Trigger: CAACCCTCCGGTGTCGCTCCTGCAGCAATGCACCAACATTCTTTCCCAGGGAAGCAAAATACAGACAAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS TCA 72 bp | AGAGAGTCTGTAGAAAACAAACCTCCGCAGAGCAGCTaGCCGGCTGAGACGGAGTTACCTGTTGCATCAATA | + |
Preference number: 6 (lower is better) Translates to: RESVENKPPQSS*PAETELPVASI Trigger: TATTGATGCAACAGGTAACTCCGTCTCAGCCGGTCAGCTGCTCTGCGGAGGTTTGTTTTCTACAGACTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS GCA 72 bp | AATCTTGAAACACCCATGGGGCTGACTAGGATGATCTaGTGCACGGGAGGCCCTAGCTGCTTTAAAAGAGAA | + |
Preference number: 6 (lower is better) Translates to: NLETPMGLTRMI*CTGGPSCFKRE Trigger: TTCTCTTTTAAAGCAGCTAGGGCCTCCCGTGCAGCAGATCATCCTAGTCAGCCCCATGGGTGTTTCAAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CAA 90 bp | AGCCAGGTACAGAGCAACATTAACAACCCGACTCTTGTCTGTATTTaGCTTCCCTGGGAAAGAATGTTGGTGCATTGCTGCAGGAGCGAC | + |
Preference number: 6 (lower is better) Translates to: SQVQSNINNPTLVCI*LPWERMLVHCCRSD Trigger: GTCGCTCCTGCAGCAATGCACCAACATTCTTTCCCAGGGAAGCAAAATACAGACAAGAGTCGGGTTGTTAATGTTGCTCTGTACCTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS GCA 72 bp | ATGCCCAAAAGAAGGGCACATAAGCCTTGGACCAACTaGTCTTCTTCTCCGAGATTTTCTGCAATCTGTCCT | + |
Preference number: 6 (lower is better) Translates to: MPKRRAHKPWTN*SSSPRFSAICP Trigger: AGGACAGATTGCAGAAAATCTCGGAGAAGAAGAGCAGTTGGTCCAAGGCTTATGTGCCCTTCTTTTGGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CCA 72 bp | CCAGTACCCGCACAAGCTGGAGCATTAAATGTAGATTaGTCACTTTCTGTGCTGACCAACCAGAGTTTTCCT | + |
Preference number: 6 (lower is better) Translates to: PVPAQAGALNVD*SLSVLTNQSFP Trigger: AGGAAAACTCTGGTTGGTCAGCACAGAAAGTGACCAATCTACATTTAATGCTCCAGCTTGTGCGGGTACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CCA 72 bp | ATTAACAACCCGACTCTTGTCTGTATTTTGCTTCCCTaGGAAAGAATGTTGGTGCATTGCTGCAGGAGCGAC | + |
Preference number: 6 (lower is better) Translates to: INNPTLVCILLP*ERMLVHCCRSD Trigger: GTCGCTCCTGCAGCAATGCACCAACATTCTTTCCCAGGGAAGCAAAATACAGACAAGAGTCGGGTTGTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CAA 72 bp | ACCAGTACCCGCACAAGCTGGAGCATTAAATGTAGATaGGTCACTTTCTGTGCTGACCAACCAGAGTTTTCC | + |
Preference number: 6 (lower is better) Translates to: TSTRTSWSIKCR*VTFCADQPEFS Trigger: GGAAAACTCTGGTTGGTCAGCACAGAAAGTGACCAATCTACATTTAATGCTCCAGCTTGTGCGGGTACTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CAA 90 bp | TGTTGCATCAATAGTGGAAGGCAGAAGAGTGGCCACGATCTCTCCTaGTCCTTTCTCGTTTTTATACAGGAAGCACTGGAAACAGTAGAG | + |
Preference number: 6 (lower is better) Translates to: CCINSGRQKSGHDLS*SFLVFIQEALETVE Trigger: CTCTACTGTTTCCAGTGCTTCCTGTATAAAAACGAGAAAGGACAAGGAGAGATCGTGGCCACTCTTCTGCCTTCCACTATTGATGCAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CAA 90 bp | GACAGTTGCTTAGCCAGGTACAGAGCAACATTAACAACCCGACTCTaGTCTGTATTTTGCTTCCCTGGGAAAGAATGTTGGTGCATTGCT | + |
Preference number: 6 (lower is better) Translates to: DSCLARYRATLTTRL*SVFCFPGKECWCIA Trigger: AGCAATGCACCAACATTCTTTCCCAGGGAAGCAAAATACAGACAAGAGTCGGGTTGTTAATGTTGCTCTGTACCTGGCTAAGCAACTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CAA 72 bp | AATAGTGGAAGGCAGAAGAGTGGCCACGATCTCTCCTaGTCCTTTCTCGTTTTTATACAGGAAGCACTGGAA | + |
Preference number: 6 (lower is better) Translates to: NSGRQKSGHDLS*SFLVFIQEALE Trigger: TTCCAGTGCTTCCTGTATAAAAACGAGAAAGGACAAGGAGAGATCGTGGCCACTCTTCTGCCTTCCACTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS GCA 72 bp | ATTTTCTGGATTGCTCCATTGCTCCTTGTTAATGCCTaGAGTAGTAAGACGCCATCGTTGCGTATAATTTCT | + |
Preference number: 6 (lower is better) Translates to: IFWIAPLLLVNA*SSKTPSLRIIS Trigger: AGAAATTATACGCAACGATGGCGTCTTACTACTGCAGGCATTAACAAGGAGCAATGGAGCAATCCAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |
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CDS CAA 72 bp | TCACATGCTCACTCTCTCCTTCTACAGGAACTGATTTaGCCAAATTTTCAATCAATGAGTCCTTTTCAGCTA | + |
Preference number: 6 (lower is better) Translates to: SHAHSLLLQELI*PNFQSMSPFQL Trigger: TAGCTGAAAAGGACTCATTGATTGAAAATTTGGCAAAATCAGTTCCTGTAGAAGGAGAGAGTGAGCATGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202155.2 |
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CDS CCA 72 bp | TCTGTTTGTAAAACATGGATAAGATGTTCCATAGCTTaGATTCCCACTTCTAAGCGGTATTTCTTAGAGAGT | + |
Preference number: 6 (lower is better) Translates to: SVCKTWIRCSIA*IPTSKRYFLES Trigger: ACTCTCTAAGAAATACCGCTTAGAAGTGGGAATCCAAGCTATGGAACATCTTATCCATGTTTTACAAACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031355.10 ENSMUST00000202155.2 |