Pregenerated sensors for USHBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034911Ensembl transcript IDs: ENSMUST00000049184.9, ENSMUST00000212626.2
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGCTCCCAGCGAAGCTGCTGCAGGAGTAGCTGGTGGGCAGGGCCCTaGGCCCGCAGTGCAGCCTCCCGCAGCTCCAACCCACGCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: RSQRSCCRSSWWAGP*ARSAASRSSNPRFS Trigger: AGAGAAGCGTGGGTTGGAGCTGCGGGAGGCTGCACTGCGGGCCCAGGGCCCTGCCCACCAGCTACTCCTGCAGCAGCTTCGCTGGGAGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR GCA 90 bp | GGGTGCCCCAGGCTTCCCCAGGGCCCTAGCGGTGGCTGTCAGCACTaGCAGCTCTTCTGCCTGCTGAGCCTGCAACCGAGCCACCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: GCPRLPQGPSGGCQH*QLFCLLSLQPSHLL Trigger: CAGCAGGTGGCTCGGTTGCAGGCTCAGCAGGCAGAAGAGCTGGCAGTGCTGACAGCCACCGCTAGGGCCCTGGGGAAGCCTGGGGCACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR CCA 90 bp | CACAAGCAAACGTGGTCCGGGCCCTACAGGAAAGTCTGGGCTGGCTaGGGTGCCCCAGGCTTCCCCAGGGCCCTAGCGGTGGCTGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: HKQTWSGPYRKVWAG*GAPGFPRALAVAVS Trigger: GCTGACAGCCACCGCTAGGGCCCTGGGGAAGCCTGGGGCACCCCAGCCAGCCCAGACTTTCCTGTAGGGCCCGGACCACGTTTGCTTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR GCA 90 bp | CCCCAGCCTCCTCCTCGCTGCTTGGGTCCTCGCTACTGCCTCCACTaGTGCCATCACCCGCAAAGTGAGCCCGCTCCCAGCGAAGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: PQPPPRCLGPRYCLH*CHHPQSEPAPSEAA Trigger: AGCAGCTTCGCTGGGAGCGGGCTCACTTTGCGGGTGATGGCAGCAGTGGAGGCAGTAGCGAGGACCCAAGCAGCGAGGAGGAGGCTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR GCA 90 bp | GTCTGTCCTCCCCAGCCTCCTCCTCGCTGCTTGGGTCCTCGCTACTaGCTCCACTGCTGCCATCACCCGCAAAGTGAGCCCGCTCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: VCPPQPPPRCLGPRY*LHCCHHPQSEPAPS Trigger: GCTGGGAGCGGGCTCACTTTGCGGGTGATGGCAGCAGTGGAGGCAGTAGCGAGGACCCAAGCAGCGAGGAGGAGGCTGGGGAGGACAGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR GCA 90 bp | GGCCCTGGTAGTGCTGCTGTCTGTCCTCCCCAGCCTCCTCCTCGCTaGTTGGGTCCTCGCTACTGCCTCCACTGCTGCCATCACCCGCAA | + |
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Preference number: 1 (lower is better) Translates to: GPGSAAVCPPQPPPR*LGPRYCLHCCHHPQ Trigger: TTGCGGGTGATGGCAGCAGTGGAGGCAGTAGCGAGGACCCAAGCAGCGAGGAGGAGGCTGGGGAGGACAGACAGCAGCACTACCAGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR TCA 90 bp | AGGGCCCTAGCGGTGGCTGTCAGCACTGCCAGCTCTTCTGCCTGCTaGGCCTGCAACCGAGCCACCTGCTGCTCCAACTTCAGGCGTTGC | + |
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Preference number: 1 (lower is better) Translates to: RALAVAVSTASSSAC*ACNRATCCSNFRRC Trigger: GCAACGCCTGAAGTTGGAGCAGCAGGTGGCTCGGTTGCAGGCTCAGCAGGCAGAAGAGCTGGCAGTGCTGACAGCCACCGCTAGGGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR GCA 90 bp | CTTCCCCAGGGCCCTAGCGGTGGCTGTCAGCACTGCCAGCTCTTCTaGCTGCTGAGCCTGCAACCGAGCCACCTGCTGCTCCAACTTCAG | + |
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Preference number: 1 (lower is better) Translates to: LPQGPSGGCQHCQLF*LLSLQPSHLLLQLQ Trigger: CTGAAGTTGGAGCAGCAGGTGGCTCGGTTGCAGGCTCAGCAGGCAGAAGAGCTGGCAGTGCTGACAGCCACCGCTAGGGCCCTGGGGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR GCA 90 bp | GCAGCCTCCCGCAGCTCCAACCCACGCTTCTCTCGTTGTGTTAGCTaGAGCCTCAGCACCAGATCAGCCAGCCTGTCCCGAGTAGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: AASRSSNPRFSRCVS*SLSTRSASLSRVAA Trigger: AGCAGCTACTCGGGACAGGCTGGCTGATCTGGTGCTGAGGCTGCAGCTAACACAACGAGAGAAGCGTGGGTTGGAGCTGCGGGAGGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR CCA 90 bp | CAGGACACTGTGACACTCCAGCCACCTCTGTGTCACAAGCAAACGTaGTCCGGGCCCTACAGGAAAGTCTGGGCTGGCTGGGGTGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: QDTVTLQPPLCHKQT*SGPYRKVWAGWGAP Trigger: TGGGGCACCCCAGCCAGCCCAGACTTTCCTGTAGGGCCCGGACCACGTTTGCTTGTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR GCA 90 bp | GGGCAAGGTGGGGCCAGGTTGTATCTCCAGAATGGCCTGCACTGTTaGTTCTGCATGGGGCATAGTGGCCTTGGGTGCAGTGACAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: GQGGARLYLQNGLHC*FCMGHSGLGCSDRA Trigger: GGCCCTGTCACTGCACCCAAGGCCACTATGCCCCATGCAGAAGCAACAGTGCAGGCCATTCTGGAGATACAACCTGGCCCCACCTTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR CCA 90 bp | GAGCCTTGCACAGTTCTCTGGACAGCTCGGCACTCTGAACACGTCTaGTTCGGCCCTTCTGAGTCACCTGTTCCAGCTGCTGCCGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: EPCTVLWTARHSEHV*FGPSESPVPAAAAG Trigger: CCCTGCGGCAGCAGCTGGAACAGGTGACTCAGAAGGGCCGAACCAGACGTGTTCAGAGTGCCGAGCTGTCCAGAGAACTGTGCAAGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR TCA 90 bp | GGACTGCAGCTGTGCCCGCAGGTCTATTGCCCGGGCCAAGGACGCTaGCAGTTCCTGGGACACATTCTCAGAGTCCCACACTTTGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: GLQLCPQVYCPGQGR*QFLGHILRVPHFAH Trigger: ATGGGCAAAGTGTGGGACTCTGAGAATGTGTCCCAGGAACTGTCAGCGTCCTTGGCCCGGGCAATAGACCTGCGGGCACAGCTGCAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR TCA 90 bp | GCTCCAACTTCAGGCGTTGCTCTTCCTGCTTCCGGTGGGCTCCTCTaGAGGCCAAGGCCAGAGCACTGTGAGCCTTGCACAGTTCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: APTSGVALPASGGLL*RPRPEHCEPCTVLW Trigger: CCAGAGAACTGTGCAAGGCTCACAGTGCTCTGGCCTTGGCCTTCAGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCTGAAGTTGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR TCA 90 bp | AGAGGCCAGTTCCTCTGGTGTAGGCTTGTCCACACCACTGCCCTCTaGGCTGGGCTGGGGTGTCTCTACCTCCATGGTTGCTTCCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: RGQFLWCRLVHTTAL*AGLGCLYLHGCFLL Trigger: AAGAAGGAAGCAACCATGGAGGTAGAGACACCCCAGCCCAGCTCAGAGGGCAGTGGTGTGGACAAGCCTACACCAGAGGAACTGGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR GCA 90 bp | AATGGCCTGCACTGTTGCTTCTGCATGGGGCATAGTGGCCTTGGGTaGAGTGACAGGGCCAAGTTCTTCGGGGATCTTCACCAGAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: NGLHCCFCMGHSGLG*SDRAKFFGDLHQSP Trigger: TGGGCTCTGGTGAAGATCCCCGAAGAACTTGGCCCTGTCACTGCACCCAAGGCCACTATGCCCCATGCAGAAGCAACAGTGCAGGCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR GCA 90 bp | AGGACGCTGACAGTTCCTGGGACACATTCTCAGAGTCCCACACTTTaGCCATCTGACCATCCAGGAGGGCAAGAGGGCCCTGGTAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: RTLTVPGTHSQSPTL*PSDHPGGQEGPGSA Trigger: AGCACTACCAGGGCCCTCTTGCCCTCCTGGATGGTCAGATGGGCAAAGTGTGGGACTCTGAGAATGTGTCCCAGGAACTGTCAGCGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR CCA 90 bp | TCCTCTGGTGTAGGCTTGTCCACACCACTGCCCTCTGAGCTGGGCTaGGGTGTCTCTACCTCCATGGTTGCTTCCTTCTTCATCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: SSGVGLSTPLPSELG*GVSTSMVASFFISS Trigger: GCTGCTGATGAAGAAGGAAGCAACCATGGAGGTAGAGACACCCCAGCCCAGCTCAGAGGGCAGTGGTGTGGACAAGCCTACACCAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR TCA 90 bp | CAGGCCTCCTTAGTGCAGGCTGTTGGGAGCACACAGAGACAGCTCTaGGGGCTTCAAACAATCTCAGCAGGTGCCCTACTGCTGAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: QASLVQAVGSTQRQL*GLQTISAGALLLSN Trigger: GTTGCTCAGCAGTAGGGCACCTGCTGAGATTGTTTGAAGCCCTCAGAGCTGTCTCTGTGTGCTCCCAACAGCCTGCACTAAGGAGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR CCA 90 bp | CTGCTAGGTCCTGCTGGATCTGAGACTTCTCCAGATGGGGCAAGGTaGGGCCAGGTTGTATCTCCAGAATGGCCTGCACTGTTGCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LLGPAGSETSPDGAR*GQVVSPEWPALLLL Trigger: CAGAAGCAACAGTGCAGGCCATTCTGGAGATACAACCTGGCCCCACCTTGCCCCATCTGGAGAAGTCTCAGATCCAGCAGGACCTAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR GCA 90 bp | GACTTCCAGGTGTATATGTCACTGGGTTTGGAACTCAGGGCCCTGTaGGTGCTAGGCCTATACTCCACCCACCAAGGCCTTTGTTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: DFQVYMSLGLELRAL*VLGLYSTHQGLCFP Trigger: GGGGAAACAAAGGCCTTGGTGGGTGGAGTATAGGCCTAGCACGCACAGGGCCCTGAGTTCCAAACCCAGTGACATATACACCTGGAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR TCA 90 bp | TTGTGGCGTCCATCCTCATTCCACCTTTATGTGGGAGCTGGGAATTaGATGCAGACCTCAAATTGTCACTCCGCAATAAGCACCCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: LWRPSSFHLYVGAGN*MQTSNCHSAISTLA Trigger: GGCAAGGGTGCTTATTGCGGAGTGACAATTTGAGGTCTGCATTCAATTCCCAGCTCCCACATAAAGGTGGAATGAGGATGGACGCCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR CCA 90 bp | GTCAGAGGACAACTTTGTGGCGTCCATCCTCATTCCACCTTTATGTaGGAGCTGGGAATTGAATGCAGACCTCAAATTGTCACTCCGCAA | + |
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Preference number: 1 (lower is better) Translates to: VRGQLCGVHPHSTFM*ELGIECRPQIVTPQ Trigger: TTGCGGAGTGACAATTTGAGGTCTGCATTCAATTCCCAGCTCCCACATAAAGGTGGAATGAGGATGGACGCCACAAAGTTGTCCTCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR CCA 90 bp | GACAACTTTGTGGCGTCCATCCTCATTCCACCTTTATGTGGGAGCTaGGAATTGAATGCAGACCTCAAATTGTCACTCCGCAATAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: DNFVASILIPPLCGS*ELNADLKLSLRNKH Trigger: GTGCTTATTGCGGAGTGACAATTTGAGGTCTGCATTCAATTCCCAGCTCCCACATAAAGGTGGAATGAGGATGGACGCCACAAAGTTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR TCA 90 bp | ACTGGACTCTGGTCCTCCTCTAGAGCAGTAAGTGCTCTTAACTGCTaGGGTATCTCCTCTGACTCTCAATTTAACAACAGTAACAACGGG | + |
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Preference number: 1 (lower is better) Translates to: TGLWSSSRAVSALNC*GISSDSQFNNSNNG Trigger: CCCGTTGTTACTGTTGTTAAATTGAGAGTCAGAGGAGATACCTCAGCAGTTAAGAGCACTTACTGCTCTAGAGGAGGACCAGAGTCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR GCA 90 bp | GAATTGAATGCAGACCTCAAATTGTCACTCCGCAATAAGCACCCTTaGCCAGTCAGCCATCTCTCTGGTTACACTTTTCTCATTCATTCA | + |
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Preference number: 1 (lower is better) Translates to: ELNADLKLSLRNKHP*PVSHLSGYTFLIHS Trigger: TGAATGAATGAGAAAAGTGTAACCAGAGAGATGGCTGACTGGGCAAGGGTGCTTATTGCGGAGTGACAATTTGAGGTCTGCATTCAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR CAA 90 bp | CCTGGTAGTGCTGCTGTCTGTCCTCCCCAGCCTCCTCCTCGCTGCTaGGGTCCTCGCTACTGCCTCCACTGCTGCCATCACCCGCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: PGSAAVCPPQPPPRC*GPRYCLHCCHHPQS Trigger: ACTTTGCGGGTGATGGCAGCAGTGGAGGCAGTAGCGAGGACCCAAGCAGCGAGGAGGAGGCTGGGGAGGACAGACAGCAGCACTACCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCTGCAGAAGACTCCCACATGTTCTATAAGGGCTGGGACCAATGCAGGCCTCCTGGGCTGGCTGGGGTaGCCCAGGCTTCCCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: ILQKTPTCSIRAGTNAGLLGWLG*PRLPQG Trigger: GCCCTGGGGAAGCCTGGGGCACCCCAGCCAGCCCAG...GAGGCCTGCATTGGTCCCAGCCCTTATAGAACATGTGGGAGTCTTCTGCAGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTCCCCTCTTGAAGAGACGCTCCAGGTGCCAGGGACAAAGGACAGGTTTGAAAGTCTGGGCTGGCTaGGGTGCCCCAGGCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: LSPLLKRRSRCQGQRTGLKVWAG*GAPGFP Trigger: GGGGAAGCCTGGGGCACCCCAGCCAGCCCAGACTTT...CAAACCTGTCCTTTGTCCCTGGCACCTGGAGCGTCTCTTCAAGAGGGGACTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGCGTCCTAGGCGGCCAGAAGCATCAGATCCCCTAGAGCTGGAATTACAGGAGGCCAGAAGGGGGTaGCAGATCTCCTTGACCCGG | + |
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Preference number: 2 (lower is better) Translates to: CGRPRRPEASDPLELELQEARRG*QISLTR Trigger: CCGGGTCAAGGAGATCTGGCACCCCCTTCTGGCCTC...CTGTAATTCCAGCTCTAGGGGATCTGATGCTTCTGGCCGCCTAGGACGCCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCATCAGATCCCCTAGAGCTGGAATTACAGGTGGCTGTGAGCTACTATGGGTGCAGGAGTAGCTGGTaGGCAGGGCCCTGGGCCCGC | + |
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Preference number: 2 (lower is better) Translates to: EASDPLELELQVAVSYYGCRSSW*AGPWAR Trigger: GCGGGCCCAGGGCCCTGCCCACCAGCTACTCCTGCA...CCCATAGTAGCTCACAGCCACCTGTAATTCCAGCTCTAGGGGATCTGATGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTCCCCTCTTGAAGAGACGCTCCAGGTGCCAGGGACAAAGGACAGGTTTGTGGCCTTGGGTGCAGTaGCAGGGCCAAGTTCTTCGG | + |
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Preference number: 2 (lower is better) Translates to: LSPLLKRRSRCQGQRTGLWPWVQ*QGQVLR Trigger: CCGAAGAACTTGGCCCTGTCACTGCACCCAAGGCCA...CAAACCTGTCCTTTGTCCCTGGCACCTGGAGCGTCTCTTCAAGAGGGGACTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGTCCCCTCTTGAAGAGACGCTCCAGGTGCCAGGGACAAAGGACAGGTTTGGGTGGCTGTCAGCACTaGCAGCTCTTCTGCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LSPLLKRRSRCQGQRTGLGGCQH*QLFCLL Trigger: CAGCAGGCAGAAGAGCTGGCAGTGCTGACAGCCACC...CAAACCTGTCCTTTGTCCCTGGCACCTGGAGCGTCTCTTCAAGAGGGGACTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAACATTAGTACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGCACCACAGGACACTGTaGCACTCCAGCCACCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: GNISTEPAEARRGCQISLHHRTL*HSSHLC Trigger: ACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTG...CAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACTAATGTTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGCGTCCTAGGCGGCCAGAAGCATCAGATCCCCTAGAGCTGGAATTACAGAGGTCCTGCTGGATCTaGGACTTCTCCAGATGGGGC | + |
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Preference number: 2 (lower is better) Translates to: CGRPRRPEASDPLELELQRSCWI*DFSRWG Trigger: GCCCCATCTGGAGAAGTCTCAGATCCAGCAGGACCT...CTGTAATTCCAGCTCTAGGGGATCTGATGCTTCTGGCCGCCTAGGACGCCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGACAACTTTGTGGCGTCCATCCTCATTCCACCTTTATGTGGGAGCTGGGGACAGCTCGGCACTCTaGACACGTCTGGTTCGGCCC | + |
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Preference number: 2 (lower is better) Translates to: QRTTLWRPSSFHLYVGAGDSSAL*TRLVRP Trigger: GGGCCGAACCAGACGTGTTCAGAGTGCCGAGCTGTC...CCCAGCTCCCACATAAAGGTGGAATGAGGATGGACGCCACAAAGTTGTCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR TCA 90 bp | GAACTGGAGTTACAGACAGTTGTGAGCTGCCACGTTGGGTGCTGGAAATGGATCTCCGGTGGGCTCCTCTaGAGGCCAAGGCCAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: ELELQTVVSCHVGCWKWISGGLL*RPRPEH Trigger: GTGCTCTGGCCTTGGCCTTCAGAGGAGCCCACCGGA...GATCCATTTCCAGCACCCAACGTGGCAGCTCACAACTGTCTGTAACTCCAGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTCCCCTCTTGAAGAGACGCTCCAGGTGCCAGGGACAAAGGACAGGTTTGCCAGATGGGGCAAGGTaGGGCCAGGTTGTATCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LSPLLKRRSRCQGQRTGLPDGAR*GQVVSP Trigger: TGGAGATACAACCTGGCCCCACCTTGCCCCATCTGG...CAAACCTGTCCTTTGTCCCTGGCACCTGGAGCGTCTCTTCAAGAGGGGACTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR CAA 90 bp | TCCAGAATGGCCTGCACTGTTGCTTCTGCATGGGGCATAGTGGCCTaGGGTGCAGTGACAGGGCCAAGTTCTTCGGGGATCTTCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: SRMACTVASAWGIVA*GAVTGPSSSGIFTR Trigger: TCTGGTGAAGATCCCCGAAGAACTTGGCCCTGTCACTGCACCCAAGGCCACTATGCCCCATGCAGAAGCAACAGTGCAGGCCATTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR TCA 90 bp | AGACTTCCAGGTGTATATGTCACTGGGTTTGGAACTCAGGGCCCTGTGCGTGCTCTGGTTCGGCCCTTCTaGGTCACCTGTTCCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: RLPGVYVTGFGTQGPVRALVRPF*VTCSSC Trigger: GCAGCTGGAACAGGTGACTCAGAAGGGCCGAACCAG...AGCACGCACAGGGCCCTGAGTTCCAAACCCAGTGACATATACACCTGGAAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCAAGGCCAGAGCACTGTGAGCCTTGCACAGTTCTCTGGACAGCTCGGCACTAATGGCCTGCACTGTTaGTTCTGCATGGGGCATAGT | + |
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Preference number: 2 (lower is better) Translates to: GQGQSTVSLAQFSGQLGTNGLHC*FCMGHS Trigger: ACTATGCCCCATGCAGAAGCAACAGTGCAGGCCATT...AGTGCCGAGCTGTCCAGAGAACTGTGCAAGGCTCACAGTGCTCTGGCCTTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTATTCTGCAGAAGACTCCCACATGTTCTATAAGGGCTGGGACCAATGCAGGCACACCACTGCCCTCTaGGCTGGGCTGGGGTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: MYSAEDSHMFYKGWDQCRHTTAL*AGLGCL Trigger: GAGACACCCCAGCCCAGCTCAGAGGGCAGTGGTGTG...CCTGCATTGGTCCCAGCCCTTATAGAACATGTGGGAGTCTTCTGCAGAATACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGCAGAAGACTCCCACATGTTCTATAAGGGCTGGGACCAATGCAGGCCTCCAGGTGCCCTACTGCTaGGCAACCACCAGCCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: ILQKTPTCSIRAGTNAGLQVPYC*ATTSPL Trigger: TAGAGGGCTGGTGGTTGCTCAGCAGTAGGGCACCTG...GAGGCCTGCATTGGTCCCAGCCCTTATAGAACATGTGGGAGTCTTCTGCAGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTGTATATGTCACTGGGTTTGGAACTCAGGGCCCTGTGCGTGCTAGGCCTGAGCACTGTGAGCCTTaGACAGTTCTCTGGACAGCT | + |
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Preference number: 2 (lower is better) Translates to: PGVYVTGFGTQGPVRARPEHCEP*TVLWTA Trigger: AGCTGTCCAGAGAACTGTGCAAGGCTCACAGTGCTC...AGGCCTAGCACGCACAGGGCCCTGAGTTCCAAACCCAGTGACATATACACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTGTATATGTCACTGGGTTTGGAACTCAGGGCCCTGTGCGTGCTAGGCCTTCTCGTTGTGTTAGCTaGAGCCTCAGCACCAGATCA | + |
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Preference number: 2 (lower is better) Translates to: PGVYVTGFGTQGPVRARPSRCVS*SLSTRS Trigger: TGATCTGGTGCTGAGGCTGCAGCTAACACAACGAGA...AGGCCTAGCACGCACAGGGCCCTGAGTTCCAAACCCAGTGACATATACACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGCGTCCTAGGCGGCCAGAAGCATCAGATCCCCTAGAGCTGGAATTACAGAGTGCTCTTAACTGCTaGGGTATCTCCTCTGACTCT | + |
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Preference number: 2 (lower is better) Translates to: CGRPRRPEASDPLELELQSALNC*GISSDS Trigger: AGAGTCAGAGGAGATACCTCAGCAGTTAAGAGCACT...CTGTAATTCCAGCTCTAGGGGATCTGATGCTTCTGGCCGCCTAGGACGCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGTATTCTGCAGAAGACTCCCACATGTTCTATAAGGGCTGGGACCAATGCAGGCACTGCCAGCTCTTCTaGCTGCTGAGCCTGCAACCG | + |
|
Preference number: 2 (lower is better) Translates to: MYSAEDSHMFYKGWDQCRHCQLF*LLSLQP Trigger: CGGTTGCAGGCTCAGCAGGCAGAAGAGCTGGCAGTG...CCTGCATTGGTCCCAGCCCTTATAGAACATGTGGGAGTCTTCTGCAGAATACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTCTGGACAGCTCGGCACTCTGAACACGTCTGGTTCGGCCCTTCTGAGTCAGTTGTATCTCCAGAATaGCCTGCACTGTTGCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: VLWTARHSEHVWFGPSESVVSPE*PALLLL Trigger: CAGAAGCAACAGTGCAGGCCATTCTGGAGATACAAC...TGACTCAGAAGGGCCGAACCAGACGTGTTCAGAGTGCCGAGCTGTCCAGAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGTATTCTGCAGAAGACTCCCACATGTTCTATAAGGGCTGGGACCAATGCAGGCCTGCTCTTAGTTGTTaGACCACCTCTCCGCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: MYSAEDSHMFYKGWDQCRPALSC*TTSPPT Trigger: GGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGG...CCTGCATTGGTCCCAGCCCTTATAGAACATGTGGGAGTCTTCTGCAGAATACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGACAACTTTGTGGCGTCCATCCTCATTCCACCTTTATGTGGGAGCTGGGATGTTCTATAAGGGCTaGGACCAATGCAGGCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: QRTTLWRPSSFHLYVGAGMFYKG*DQCRPP Trigger: AGGAGGCCTGCATTGGTCCCAGCCCTTATAGAACAT...CCCAGCTCCCACATAAAGGTGGAATGAGGATGGACGCCACAAAGTTGTCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR-3UTR CCA 90 bp | GATATTGTGGATGTCAGAGGACAACTTTGTGGCGTCCATCCTCATTCCACCTTTTGCCACGTTGGGTGCTaGAAATGGATCCCAGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: DIVDVRGQLCGVHPHSTFCHVGC*KWIPGP Trigger: AGGGCCTGGGATCCATTTCCAGCACCCAACGTGGCA...AAAGGTGGAATGAGGATGGACGCCACAAAGTTGTCCTCTGACATCCACAATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR GCA 90 bp | GATATTGTGGATGTCAGAGGACAACTTTGTGGCGTCCATCCTCATTCCACCTTTCATAGTGGCCTTGGGTaGAGTGACAGGGCCAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: DIVDVRGQLCGVHPHSTFHSGLG*SDRAKF Trigger: GAACTTGGCCCTGTCACTGCACCCAAGGCCACTATG...AAAGGTGGAATGAGGATGGACGCCACAAAGTTGTCCTCTGACATCCACAATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR-3UTR GCA 90 bp | GATATTGTGGATGTCAGAGGACAACTTTGTGGCGTCCATCCTCATTCCACCTTTAACAATCTCAGCAGGTaGCCTACTGCTGAGCAACCA | + |
|
Preference number: 2 (lower is better) Translates to: DIVDVRGQLCGVHPHSTFNNLSR*PTAEQP Trigger: TGGTTGCTCAGCAGTAGGGCACCTGCTGAGATTGTT...AAAGGTGGAATGAGGATGGACGCCACAAAGTTGTCCTCTGACATCCACAATATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCAATTTAACAACAGTAACAACGGGTGATATTGTGGATGTCAGAGGACAACTTCACTGCCCTCTGAGCTaGGCTGGGGTGTCTCTACCT | + |
|
Preference number: 2 (lower is better) Translates to: LNLTTVTTGDIVDVRGQLHCPLS*AGVSLP Trigger: AGGTAGAGACACCCCAGCCCAGCTCAGAGGGCAGTG...AAGTTGTCCTCTGACATCCACAATATCACCCGTTGTTACTGTTGTTAAATTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCAATTTAACAACAGTAACAACGGGTGATATTGTGGATGTCAGAGGACAACTTAAGGCCAGAGCACTGTaGGCCTTGCACAGTTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LNLTTVTTGDIVDVRGQLKARAL*ALHSSL Trigger: CAGAGAACTGTGCAAGGCTCACAGTGCTCTGGCCTT...AAGTTGTCCTCTGACATCCACAATATCACCCGTTGTTACTGTTGTTAAATTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR-3UTR TCA 90 bp | CACCCTTGCCCAGTCAGCCATCTCTCTGGTTACACTTTTCTCATTCATTCATTTTGTAATGTGTCTACCTaGTGTCCACAGAAGCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: HPCPVSHLSGYTFLIHSFCNVST*CPQKPE Trigger: TTCTGGCTTCTGTGGACATCAGGTAGACACATTACA...AAATGAATGAATGAGAAAAGTGTAACCAGAGAGATGGCTGACTGGGCAAGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCAATTTAACAACAGTAACAACGGGTGATATTGTGGATGTCAGAGGACAACTTCAGAGTCCCACACTTTaGCCATCTGACCATCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LNLTTVTTGDIVDVRGQLQSPTL*PSDHPG Trigger: TCCTGGATGGTCAGATGGGCAAAGTGTGGGACTCTG...AAGTTGTCCTCTGACATCCACAATATCACCCGTTGTTACTGTTGTTAAATTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR CCA 72 bp | ACGTGGTCCGGGCCCTACAGGAAAGTCTGGGCTGGCTaGGGTGCCCCAGGCTTCCCCAGGGCCCTAGCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TWSGPYRKVWAG*GAPGFPRALAV Trigger: CACCGCTAGGGCCCTGGGGAAGCCTGGGGCACCCCAGCCAGCCCAGACTTTCCTGTAGGGCCCGGACCACGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR GCA 72 bp | AGGCTTCCCCAGGGCCCTAGCGGTGGCTGTCAGCACTaGCAGCTCTTCTGCCTGCTGAGCCTGCAACCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RLPQGPSGGCQH*QLFCLLSLQPS Trigger: GCTCGGTTGCAGGCTCAGCAGGCAGAAGAGCTGGCAGTGCTGACAGCCACCGCTAGGGCCCTGGGGAAGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR TCA 72 bp | AGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTaGCCCGGAGTCACAGGCGCCATGGCTGCTGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLQRPEGGARSP*PGVTGAMAAEA Trigger: AGCCTCAGCAGCCATGGCGCCTGTGACTCCGGGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| 3UTR TCA 72 bp | TCGCTACTGCCTCCACTGCTGCCATCACCCGCAAAGTaGGCCCGCTCCCAGCGAAGCTGCTGCAGGAGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLLPPLLPSPAK*ARSQRSCCRSS Trigger: GCTACTCCTGCAGCAGCTTCGCTGGGAGCGGGCTCACTTTGCGGGTGATGGCAGCAGTGGAGGCAGTAGCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR GCA 72 bp | CAGCCTGGGGTTCCTCTCCCTGGGAACAAGCCTCCCTaGCACACCCTTAAGCTAAGCCCGTCCCACCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: QPGVPLPGNKPP*HTLKLSPSHLS Trigger: ACTGAGGTGGGACGGGCTTAGCTTAAGGGTGTGGCAGGGAGGCTTGTTCCCAGGGAGAGGAACCCCAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR TCA 72 bp | AGCCTGTCCCGAGTAGCTGCTAGGTCCTGCTGGATCTaGGACTTCTCCAGATGGGGCAAGGTGGGGCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SLSRVAARSCWI*DFSRWGKVGPG Trigger: ACCTGGCCCCACCTTGCCCCATCTGGAGAAGTCTCAGATCCAGCAGGACCTAGCAGCTACTCGGGACAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR TCA 72 bp | CTGTGCCCGCAGGTCTATTGCCCGGGCCAAGGACGCTaGCAGTTCCTGGGACACATTCTCAGAGTCCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: LCPQVYCPGQGR*QFLGHILRVPH Trigger: GTGTGGGACTCTGAGAATGTGTCCCAGGAACTGTCAGCGTCCTTGGCCCGGGCAATAGACCTGCGGGCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR TCA 72 bp | TCAGGCGTTGCTCTTCCTGCTTCCGGTGGGCTCCTCTaGAGGCCAAGGCCAGAGCACTGTGAGCCTTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: SGVALPASGGLL*RPRPEHCEPCT Trigger: TGTGCAAGGCTCACAGTGCTCTGGCCTTGGCCTTCAGAGGAGCCCACCGGAAGCAGGAAGAGCAACGCCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR CCA 72 bp | GTGACACTCCAGCCACCTCTGTGTCACAAGCAAACGTaGTCCGGGCCCTACAGGAAAGTCTGGGCTGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VTLQPPLCHKQT*SGPYRKVWAGW Trigger: CCAGCCAGCCCAGACTTTCCTGTAGGGCCCGGACCACGTTTGCTTGTGACACAGAGGTGGCTGGAGTGTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR CCA 72 bp | CCAAGGCCAGAGCACTGTGAGCCTTGCACAGTTCTCTaGACAGCTCGGCACTCTGAACACGTCTGGTTCGGC | + |
|
Preference number: 3 (lower is better) Translates to: PRPEHCEPCTVL*TARHSEHVWFG Trigger: GCCGAACCAGACGTGTTCAGAGTGCCGAGCTGTCCAGAGAACTGTGCAAGGCTCACAGTGCTCTGGCCTTGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR GCA 72 bp | AACATTAGTACAGAGCCTGCAGAGGCCAGAAGGGGGTaGCAGATCTCCTTGACCCGGAGTCACAGGCGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: NISTEPAEARRG*QISLTRSHRRH Trigger: ATGGCGCCTGTGACTCCGGGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACTAATGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| 3UTR GCA 72 bp | GGGGCCAGGTTGTATCTCCAGAATGGCCTGCACTGTTaGTTCTGCATGGGGCATAGTGGCCTTGGGTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GARLYLQNGLHC*FCMGHSGLGCS Trigger: ACTGCACCCAAGGCCACTATGCCCCATGCAGAAGCAACAGTGCAGGCCATTCTGGAGATACAACCTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR GCA 72 bp | GGCAAGGTGGGGCCAGGTTGTATCTCCAGAATGGCCTaGACTGTTGCTTCTGCATGGGGCATAGTGGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GKVGPGCISRMA*TVASAWGIVAL Trigger: CAAGGCCACTATGCCCCATGCAGAAGCAACAGTGCAGGCCATTCTGGAGATACAACCTGGCCCCACCTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR CCA 72 bp | CAAGTGCCCGCAATTGGAGACCCTGCTCTTAGTTGTTaGACCACCTCTCCGCCCACCACAGGACACTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QVPAIGDPALSC*TTSPPTTGHCD Trigger: GTCACAGTGTCCTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGGCACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| 3UTR-3UTR CAA 90 bp | CTTACCATTTTCAATCATGTGTATCTGTGTGTGGGCGTCCTAGGCGGCCAGAAGCCTCCTCCTCGCTGCTaGGGTCCTCGCTACTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LTIFNHVYLCVGVLGGQKPPPRC*GPRYCL Trigger: GAGGCAGTAGCGAGGACCCAAGCAGCGAGGAGGAGG...CTTCTGGCCGCCTAGGACGCCCACACACAGATACACATGATTGAAAATGGTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR TCA 72 bp | TTGTTGGACCACCTCTCCGCCCACCACAGGACACTGTaGCACTCCAGCCACCTCTGTGTCACAAGCAAACGT | + |
|
Preference number: 3 (lower is better) Translates to: LLDHLSAHHRTL*HSSHLCVTSKR Trigger: ACGTTTGCTTGTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGGTCCAACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| 3UTR GCA 72 bp | ACAGTTCCTGGGACACATTCTCAGAGTCCCACACTTTaGCCATCTGACCATCCAGGAGGGCAAGAGGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TVPGTHSQSPTL*PSDHPGGQEGP Trigger: AGGGCCCTCTTGCCCTCCTGGATGGTCAGATGGGCAAAGTGTGGGACTCTGAGAATGTGTCCCAGGAACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR CCA 72 bp | ACAGTTCTCTGGACAGCTCGGCACTCTGAACACGTCTaGTTCGGCCCTTCTGAGTCACCTGTTCCAGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TVLWTARHSEHV*FGPSESPVPAA Trigger: AGCAGCTGGAACAGGTGACTCAGAAGGGCCGAACCAGACGTGTTCAGAGTGCCGAGCTGTCCAGAGAACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR-3UTR CAA 90 bp | TACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCCGGAGTCATCTCTACCTCCATGGTaGCTTCCTTCTTCATCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YRACRGQKGVPDLLDPESSLPPW*LPSSSA Trigger: TGCTGATGAAGAAGGAAGCAACCATGGAGGTAGAGA...TGACTCCGGGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGGCGTCCTAGGCGGCCAGAAGCATCAGATCCCCTAGAGCTGGAATTACAGTATATGTCACTGGGTTaGGAACTCAGGGCCCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: CGRPRRPEASDPLELELQYMSLG*ELRALC Trigger: GCACAGGGCCCTGAGTTCCAAACCCAGTGACATATA...CTGTAATTCCAGCTCTAGGGGATCTGATGCTTCTGGCCGCCTAGGACGCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR GCA 72 bp | GAGACAGCTCTGAGGGCTTCAAACAATCTCAGCAGGTaGCCTACTGCTGAGCAACCACCAGCCCTCTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: ETALRASNNLSR*PTAEQPPALYF Trigger: GAAGTAGAGGGCTGGTGGTTGCTCAGCAGTAGGGCACCTGCTGAGATTGTTTGAAGCCCTCAGAGCTGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR GCA 72 bp | GTGTATATGTCACTGGGTTTGGAACTCAGGGCCCTGTaGGTGCTAGGCCTATACTCCACCCACCAAGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VYMSLGLELRAL*VLGLYSTHQGL Trigger: AAGGCCTTGGTGGGTGGAGTATAGGCCTAGCACGCACAGGGCCCTGAGTTCCAAACCCAGTGACATATACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR CCA 72 bp | GGAACTGGAGTTACAGACAGTTGTGAGCTGCCACGTTaGGTGCTGGAAATGGATCCCAGGCCCTCTGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GTGVTDSCELPR*VLEMDPRPSAR Trigger: TCTTGCAGAGGGCCTGGGATCCATTTCCAGCACCCAACGTGGCAGCTCACAACTGTCTGTAACTCCAGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR CCA 72 bp | GGCTGTGAGCTACTATGGGTGCTGGGAACTGGACTCTaGTCCTCCTCTAGAGCAGTAAGTGCTCTTAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: GCELLWVLGTGL*SSSRAVSALNC Trigger: GCAGTTAAGAGCACTTACTGCTCTAGAGGAGGACCAGAGTCCAGTTCCCAGCACCCATAGTAGCTCACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR CCA 72 bp | GTGGCGTCCATCCTCATTCCACCTTTATGTGGGAGCTaGGAATTGAATGCAGACCTCAAATTGTCACTCCGC | + |
|
Preference number: 3 (lower is better) Translates to: VASILIPPLCGS*ELNADLKLSLR Trigger: GCGGAGTGACAATTTGAGGTCTGCATTCAATTCCCAGCTCCCACATAAAGGTGGAATGAGGATGGACGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR GCA 72 bp | GCAGACCTCAAATTGTCACTCCGCAATAAGCACCCTTaGCCAGTCAGCCATCTCTCTGGTTACACTTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ADLKLSLRNKHP*PVSHLSGYTFL Trigger: GAGAAAAGTGTAACCAGAGAGATGGCTGACTGGGCAAGGGTGCTTATTGCGGAGTGACAATTTGAGGTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR TCA 72 bp | CCATCCTCATTCCACCTTTATGTGGGAGCTGGGAATTaGATGCAGACCTCAAATTGTCACTCCGCAATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PSSFHLYVGAGN*MQTSNCHSAIS Trigger: GCTTATTGCGGAGTGACAATTTGAGGTCTGCATTCAATTCCCAGCTCCCACATAAAGGTGGAATGAGGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR CCA 72 bp | CAACTTTGTGGCGTCCATCCTCATTCCACCTTTATGTaGGAGCTGGGAATTGAATGCAGACCTCAAATTGTC | + |
|
Preference number: 3 (lower is better) Translates to: QLCGVHPHSTFM*ELGIECRPQIV Trigger: GACAATTTGAGGTCTGCATTCAATTCCCAGCTCCCACATAAAGGTGGAATGAGGATGGACGCCACAAAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR TCA 72 bp | TTTTGTCTGCATTTGTGTCCATGTAATGTGTCTACCTaGTGTCCACAGAAGCCAGAAAAGGGTACTGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: FCLHLCPCNVST*CPQKPEKGTGP Trigger: GGGTCCAGTACCCTTTTCTGGCTTCTGTGGACATCAGGTAGACACATTACATGGACACAAATGCAGACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| 3UTR TCA 72 bp | TGGTCCTCCTCTAGAGCAGTAAGTGCTCTTAACTGCTaGGGTATCTCCTCTGACTCTCAATTTAACAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: WSSSRAVSALNC*GISSDSQFNNS Trigger: ACTGTTGTTAAATTGAGAGTCAGAGGAGATACCTCAGCAGTTAAGAGCACTTACTGCTCTAGAGGAGGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCCTGGGCTGGCTGGGGTaGCCCAGGCTTCCCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPAIGDPALSCWTTSPPTLGWLG*PRLPQG Trigger: GCCCTGGGGAAGCCTGGGGCACCCCAGCCAGCCCAG...GGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR CCA 90 bp | AGTACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCCGGAGTTGGTGGGCAGGGCCCTaGGCCCGCAGTGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: STEPAEARRGCQISLTRSWWAGP*ARSAAS Trigger: GGAGGCTGCACTGCGGGCCCAGGGCCCTGCCCACCA...ACTCCGGGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR CCA 90 bp | GTTGGACCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGCAGGAGTAGCTGGTaGGCAGGGCCCTGGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VGPPLRPPQDTVTLQPPLCRSSW*AGPWAR Trigger: GCGGGCCCAGGGCCCTGCCCACCAGCTACTCCTGCA...CAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGGTCCAAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| 3UTR CAA 72 bp | GCTGCCGCAGGGACTGCAGCTGTGCCCGCAGGTCTATaGCCCGGGCCAAGGACGCTGACAGTTCCTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AAAGTAAVPAGL*PGPRTLTVPGT Trigger: TGTCCCAGGAACTGTCAGCGTCCTTGGCCCGGGCAATAGACCTGCGGGCACAGCTGCAGTCCCTGCGGCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCCGGAGTCACAGGTGCTGCCGCAGGGACTaGAGCTGTGCCCGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EPAEARRGCQISLTRSHRCCRRD*SCARRS Trigger: AGACCTGCGGGCACAGCTGCAGTCCCTGCGGCAGCA...CCTGTGACTCCGGGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR TCA 90 bp | GTTGGACCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGCACACCACTGCCCTCTaGGCTGGGCTGGGGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGPPLRPPQDTVTLQPPLHTTAL*AGLGCL Trigger: GAGACACCCCAGCCCAGCTCAGAGGGCAGTGGTGTG...CAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGGTCCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR TCA 90 bp | CCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACTCCGGTGGGCTCCTCTaGAGGCCAAGGCCAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPLRPPQDTVTLQPPLCHSGGLL*RPRPEH Trigger: GTGCTCTGGCCTTGGCCTTCAGAGGAGCCCACCGGA...GTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR TCA 90 bp | ACGTGGTCCGGGCCCTACAGGAAAGTCTGGGCTGGCTGGGGTGCCCCAGGCTTCCAGTTCCTTGGGCTCTaGAGGCCAGGACCAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TWSGPYRKVWAGWGAPGFQFLGL*RPGPRY Trigger: ATACCTTGGTCCTGGCCTTCAGAGCCCAAGGAACTG...GAAGCCTGGGGCACCCCAGCCAGCCCAGACTTTCCTGTAGGGCCCGGACCACGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| CDS-3UTR GCA 90 bp | GGGAACATTAGTACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGGCCCTGGGCCCGCAGTaGAGCCTCCCGCAGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GNISTEPAEARRGCQISLALGPQ*SLPQLQ Trigger: TTGGAGCTGCGGGAGGCTGCACTGCGGGCCCAGGGC...CAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACTAATGTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR CCA 90 bp | GAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCCGGAGTCACAGGGAGGATGGGGGTAGGTaGGGAGGCCTCCATCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EPAEARRGCQISLTRSHREDGGR*GGLHLH Trigger: ATGCAGATGGAGGCCTCCCCACCTACCCCCATCCTC...CCTGTGACTCCGGGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR CCA 90 bp | ACGTGGTCCGGGCCCTACAGGAAAGTCTGGGCTGGCTGGGGTGCCCCAGGCTTCCATGAGGTACGTCTCTaGGGCTGGATGCTGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TWSGPYRKVWAGWGAPGFHEVRL*GWMLCG Trigger: TCCACACAGCATCCAGCCCCAGAGACGTACCTCATG...GAAGCCTGGGGCACCCCAGCCAGCCCAGACTTTCCTGTAGGGCCCGGACCACGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| CDS-3UTR TCA 90 bp | ACCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACTGGGCGTCCTGCAGTaGAGCCTGAGTGCATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTSPPTTGHCDTPATSVSLGVLQ*SLSACQ Trigger: CTGGCATGCACTCAGGCTTCACTGCAGGACGCCCAG...TGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR GCA 90 bp | CCGCAAAGTGAGCCCGCTCCCAGCGAAGCTGCTGCAGGAGTAGCTGGTGGGCAGCAAGGCAGCTACAACTaGCTCAAGGGAGCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQSEPAPSEAAAGVAGGQQGSYN*LKGAQP Trigger: AGGCTGAGCTCCCTTGAGGCAGTTGTAGCTGCCTTG...CTGCCCACCAGCTACTCCTGCAGCAGCTTCGCTGGGAGCGGGCTCACTTTGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGACCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGGCTTCTTGCAGGACCTaGTGGGCTTCCACCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGPPLRPPQDTVTLQPPLASCRT*WASTSG Trigger: GCCTGAGGTGGAAGCCCACCAGGTCCTGCAAGAAGC...CAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGGTCCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGACCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGAGGCACCCAAAGCTCTaGGTGCTGGAGTCACTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VGPPLRPPQDTVTLQPPLRHPKL*VLESLR Trigger: CCGGAGTGACTCCAGCACCCAGAGCTTTGGGTGCCT...CAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGGTCCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR CCA 90 bp | ACTCAAGTGCCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCAGGCGCAGGGCTGTaGCCTCGGCTTCCCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQVPAIGDPALSCWTTSPPGAGL*PRLPAW Trigger: CCAAGCGGGAAGCCGAGGCCACAGCCCTGCGCCTGG...CGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGGCACTTGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACAAGCTCCTCCTCGCTGCTTaGGTCCTCGCTACTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLRPPQDTVTLQPPLCHKLLLAA*VLATAS Trigger: GGAGGCAGTAGCGAGGACCCAAGCAGCGAGGAGGAG...CTTGTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR TCA 90 bp | GTTGGACCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGGCCATGGAAGAGTCCTaGGGTACCCAGGGTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VGPPLRPPQDTVTLQPPLAMEES*GTQGLL Trigger: AAGGAGACCCTGGGTACCTCAGGACTCTTCCATGGC...CAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGGTCCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR TCA 90 bp | GTTGGACCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGAGGTCCTGCTGGATCTaGGACTTCTCCAGATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGPPLRPPQDTVTLQPPLRSCWI*DFSRWG Trigger: GCCCCATCTGGAGAAGTCTCAGATCCAGCAGGACCT...CAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGGTCCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR TCA 90 bp | GTGCCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCCTGGTTCGGCCCTTCTaGGTCACCTGTTCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPAIGDPALSCWTTSPPTLVRPF*VTCSSC Trigger: GCAGCTGGAACAGGTGACTCAGAAGGGCCGAACCAG...GGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR CCA 90 bp | GAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCCGGAGTCACAGGGTACGTCTCTGGGGCTaGATGCTGTGTGGAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPAEARRGCQISLTRSHRVRLWG*MLCGKA Trigger: TGCCTTTCCACACAGCATCCAGCCCCAGAGACGTAC...CCTGTGACTCCGGGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR CCA 90 bp | AGTACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCCGGAGTCACTGCCCTCTGAGCTaGGCTGGGGTGTCTCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: STEPAEARRGCQISLTRSHCPLS*AGVSLP Trigger: AGGTAGAGACACCCCAGCCCAGCTCAGAGGGCAGTG...ACTCCGGGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR TCA 90 bp | AGTACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCCGGAGTTCCTGCAGTGAAGCCTaGGTGCATGCCAGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: STEPAEARRGCQISLTRSSCSEA*VHASSS Trigger: GGATGAGCTGGCATGCACTCAGGCTTCACTGCAGGA...ACTCCGGGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR TCA 90 bp | CCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACCACACTTTGCCCATCTaGCCATCCAGGAGGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPLRPPQDTVTLQPPLCHHTLPI*PSRRAR Trigger: TCTTGCCCTCCTGGATGGTCAGATGGGCAAAGTGTG...GTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR TCA 90 bp | CAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAGGACGACAGCTCGGCACTCTaGACACGTCTGGTTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QLETLLLVVGPPLRPPQDDSSAL*TRLVRP Trigger: GGGCCGAACCAGACGTGTTCAGAGTGCCGAGCTGTC...GTCCTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR TCA 90 bp | GGGAACATTAGTACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGAGCTCTTCTGCCTGCTaGGCCTGCAACCGAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GNISTEPAEARRGCQISLSSSAC*ACNRAT Trigger: GGTGGCTCGGTTGCAGGCTCAGCAGGCAGAAGAGCT...CAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACTAATGTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR GCA 90 bp | CCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACAAGCAAACGTGGAGGCGAGCAGCCTCCTaGTGTCCAGGTCCTGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPQDTVTLQPPLCHKQTWRRAAS*CPGPAS Trigger: AGACGCAGGACCTGGACAGCAGGAGGCTGCTCGCCT...CCACGTTTGCTTGTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGGCGTCCTAGGCGGCCAGAAGCATCAGATCCCCTAGAGCTGGAATTACAGAGGCGAGCAGCCTCCTaGTGTCCAGGTCCTGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CGRPRRPEASDPLELELQRRAAS*CPGPAS Trigger: AGACGCAGGACCTGGACAGCAGGAGGCTGCTCGCCT...CTGTAATTCCAGCTCTAGGGGATCTGATGCTTCTGGCCGCCTAGGACGCCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| CDS-3UTR GCA 90 bp | TACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCCGGAGTCACGCTACTGCCTCCACTaGTGCCATCACCCGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YRACRGQKGVPDLLDPESRYCLH*CHHPQS Trigger: ACTTTGCGGGTGATGGCAGCAGTGGAGGCAGTAGCG...TGACTCCGGGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR GCA 90 bp | CCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAACCTGTTCCAGCTGCTaGCGCAGGGACTGCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PAIGDPALSCWTTSPPTTTCSSC*RRDCSC Trigger: ACAGCTGCAGTCCCTGCGGCAGCAGCTGGAACAGGT...TGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR CCA 90 bp | CTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACAAGCAAGCTTCTTGCAGGACCTaGTGGGCTTCCACCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRPPQDTVTLQPPLCHKQASCRT*WASTSG Trigger: GCCTGAGGTGGAAGCCCACCAGGTCCTGCAAGAAGC...TTGCTTGTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR CCA 90 bp | CCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACGGGCTGGATGCTGTGTaGAAAGGCACCCAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPLRPPQDTVTLQPPLCHGLDAV*KGTQSS Trigger: AGAGCTTTGGGTGCCTTTCCACACAGCATCCAGCCC...GTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR CCA 90 bp | CCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACGTACGTCTCTGGGGCTaGATGCTGTGTGGAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLRPPQDTVTLQPPLCHVRLWG*MLCGKA Trigger: TGCCTTTCCACACAGCATCCAGCCCCAGAGACGTAC...GTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCCCAGATGGGGCAAGGTaGGGCCAGGTTGTATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPAIGDPALSCWTTSPPTPDGAR*GQVVSP Trigger: TGGAGATACAACCTGGCCCCACCTTGCCCCATCTGG...GGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR CCA 90 bp | ACTCAAGTGCCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGAAAGTCTGGGCTGGCTaGGGTGCCCCAGGCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TQVPAIGDPALSCWTTSPKVWAG*GAPGFP Trigger: GGGGAAGCCTGGGGCACCCCAGCCAGCCCAGACTTT...CGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGGCACTTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| 3UTR CAA 72 bp | GCCTGCACTGTTGCTTCTGCATGGGGCATAGTGGCCTaGGGTGCAGTGACAGGGCCAAGTTCTTCGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ACTVASAWGIVA*GAVTGPSSSGI Trigger: GATCCCCGAAGAACTTGGCCCTGTCACTGCACCCAAGGCCACTATGCCCCATGCAGAAGCAACAGTGCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| CDS-3UTR TCA 90 bp | CTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACAAGCAATCCTGCAGTGAAGCCTaGGTGCATGCCAGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LRPPQDTVTLQPPLCHKQSCSEA*VHASSS Trigger: GGATGAGCTGGCATGCACTCAGGCTTCACTGCAGGA...TTGCTTGTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR TCA 90 bp | AACATTAGTACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCCTGGGCGTCCTGCAGTaGAGCCTGAGTGCATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NISTEPAEARRGCQISLTLGVLQ*SLSACQ Trigger: CTGGCATGCACTCAGGCTTCACTGCAGGACGCCCAG...GGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACTAATGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR TCA 90 bp | CAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAGGACTGGCCTTGGGTGCAGTaGCAGGGCCAAGTTCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QLETLLLVVGPPLRPPQDWPWVQ*QGQVLR Trigger: CCGAAGAACTTGGCCCTGTCACTGCACCCAAGGCCA...GTCCTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR TCA 90 bp | CAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAGGACCCGGGCCAAGGACGCTaGCAGTTCCTGGGACACATT | + |
|
Preference number: 4 (lower is better) Translates to: QLETLLLVVGPPLRPPQDPGQGR*QFLGHI Trigger: AATGTGTCCCAGGAACTGTCAGCGTCCTTGGCCCGG...GTCCTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR GCA 90 bp | CCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACTCCTTCTCAGCAGCCTaGAGGTCACCCTTGGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPLRPPQDTVTLQPPLCHSFSAA*RSPLVV Trigger: AACTACCAAGGGTGACCTGCAGGCTGCTGAGAAGGA...GTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR GCA 90 bp | ACTCAAGTGCCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGGTCACCTGTTCCAGCTaGTGCCGCAGGGACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQVPAIGDPALSCWTTSPVTCSS*CRRDCS Trigger: GCTGCAGTCCCTGCGGCAGCAGCTGGAACAGGTGAC...CGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGGCACTTGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR GCA 90 bp | CAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAGGACGGTGGCTGTCAGCACTaGCAGCTCTTCTGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLETLLLVVGPPLRPPQDGGCQH*QLFCLL Trigger: CAGCAGGCAGAAGAGCTGGCAGTGCTGACAGCCACC...GTCCTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR CCA 90 bp | AGTACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCCGGAGTCTTGATCCAGTTCCTTaGGCTCTGAAGGCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: STEPAEARRGCQISLTRSLDPVP*ALKART Trigger: GGTCCTGGCCTTCAGAGCCCAAGGAACTGGATCAAG...ACTCCGGGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR CCA 90 bp | ATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAGGACACTCTTGCAGGACCTGGTaGGCTTCCACCTCAGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: IGDPALSCWTTSPPTTGHSCRTW*ASTSGS Trigger: CGAGCCTGAGGTGGAAGCCCACCAGGTCCTGCAAGA...GTGTCCTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR CCA 90 bp | CCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACAAGCAAACGTGGGTCTCCTTCTCTGCCTaGGCGTCCTGCAGTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPQDTVTLQPPLCHKQTWVSFSA*ASCSEA Trigger: GGCTTCACTGCAGGACGCCCAGGCAGAGAAGGAGAC...CCACGTTTGCTTGTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR CCA 90 bp | ATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAGGACACGAGGATGGGGGTAGGTaGGGAGGCCTCCATCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IGDPALSCWTTSPPTTGHEDGGR*GGLHLH Trigger: ATGCAGATGGAGGCCTCCCCACCTACCCCCATCCTC...GTGTCCTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTCTGGACAGCTCGGCACTCTGAACACGTCTGGTTCGGCCCTTCTGAGTCAAGGCACCCAAAGCTCTaGGTGCTGGAGTCACTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLWTARHSEHVWFGPSESRHPKL*VLESLR Trigger: CCGGAGTGACTCCAGCACCCAGAGCTTTGGGTGCCT...TGACTCAGAAGGGCCGAACCAGACGTGTTCAGAGTGCCGAGCTGTCCAGAGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| CDS-3UTR CCA 90 bp | CCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACACTGTTGCTTCTGCATaGGGCATAGTGGCCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPLRPPQDTVTLQPPLCHTVASA*GIVALG Trigger: ACCCAAGGCCACTATGCCCCATGCAGAAGCAACAGT...GTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR TCA 90 bp | CCAGGTGTATATGTCACTGGGTTTGGAACTCAGGGCCCTGTGCGTGCTAGGCCTGCCATGGAAGAGTCCTaGGGTACCCAGGGTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGVYVTGFGTQGPVRARPAMEES*GTQGLL Trigger: AAGGAGACCCTGGGTACCTCAGGACTCTTCCATGGC...AGGCCTAGCACGCACAGGGCCCTGAGTTCCAAACCCAGTGACATATACACCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| CDS-3UTR GCA 90 bp | ACCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCAGAGCTCAGCCTGCACTaGAAGGTCTCATACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: TTSPPTTGHCDTPATSVSELSLH*KVSYTL Trigger: CAGTGTGTATGAGACCTTGCAGTGCAGGCTGAGCTC...TGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR GCA 90 bp | ACCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCAGAGCACTGTGAGCCTTaGACAGTTCTCTGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TTSPPTTGHCDTPATSVSEHCEP*TVLWTA Trigger: AGCTGTCCAGAGAACTGTGCAAGGCTCACAGTGCTC...TGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
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| CDS-3UTR GCA 90 bp | AAGTGCCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCAAACCGAGCCACCTGCTaGTCCAACTTCAGGCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KCPQLETLLLVVGPPLRPNRATC*SNFRRC Trigger: GCAACGCCTGAAGTTGGAGCAGCAGGTGGCTCGGTT...TGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGGCACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR GCA 90 bp | AACATTAGTACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCCACTGCCAGCTCTTCTaGCTGCTGAGCCTGCAACCG | + |
|
Preference number: 4 (lower is better) Translates to: NISTEPAEARRGCQISLTHCQLF*LLSLQP Trigger: CGGTTGCAGGCTCAGCAGGCAGAAGAGCTGGCAGTG...GGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACTAATGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
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| CDS-3UTR CCA 90 bp | ACTCAAGTGCCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGGTCTCCTTCTCTGCCTaGGCGTCCTGCAGTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQVPAIGDPALSCWTTSPVSFSA*ASCSEA Trigger: GGCTTCACTGCAGGACGCCCAGGCAGAGAAGGAGAC...CGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGGCACTTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS-3UTR CCA 90 bp | TACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCCGGAGTCACCTTGCACAGTTCTCTaGACAGCTCGGCACTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YRACRGQKGVPDLLDPESPCTVL*TARHSE Trigger: TTCAGAGTGCCGAGCTGTCCAGAGAACTGTGCAAGG...TGACTCCGGGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| 3UTR CAA 72 bp | CTAGAGGCCTCCTTCTCAGCAGCCTGCAGGTCACCCTaGGTAGTTCCAACTCCAGTTCCTAGGCCAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LEASFSAACRSP*VVPTPVPRPAI Trigger: GATGGCTGGCCTAGGAACTGGAGTTGGAACTACCAAGGGTGACCTGCAGGCTGCTGAGAAGGAGGCCTCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| 3UTR CAA 72 bp | ACCCTTAAGCTAAGCCCGTCCCACCTCAGTCCCCTCTaGAAGAGACGCTCCAGGTGCCAGGGACAAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TLKLSPSHLSPL*KRRSRCQGQRT Trigger: TGTCCTTTGTCCCTGGCACCTGGAGCGTCTCTTCAAGAGGGGACTGAGGTGGGACGGGCTTAGCTTAAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| CDS-3UTR TCA 90 bp | GGGAACATTAGTACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGGGCATCTACTTCCTCTaGGCTCTCAGCTACAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GNISTEPAEARRGCQISLGIYFL*ALSYRV Trigger: GACCCTGTAGCTGAGAGCTCAGAGGAAGTAGATGCC...CAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACTAATGTTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS-3UTR TCA 90 bp | GTTCTCTGGACAGCTCGGCACTCTGAACACGTCTGGTTCGGCCCTTCTGAGTCAGGCATCTACTTCCTCTaGGCTCTCAGCTACAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLWTARHSEHVWFGPSESGIYFL*ALSYRV Trigger: GACCCTGTAGCTGAGAGCTCAGAGGAAGTAGATGCC...TGACTCAGAAGGGCCGAACCAGACGTGTTCAGAGTGCCGAGCTGTCCAGAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| CDS-3UTR TCA 90 bp | CCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACAAGCAAACGTGGCAGTTCCTTGGGCTCTaGAGGCCAGGACCAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PPQDTVTLQPPLCHKQTWQFLGL*RPGPRY Trigger: ATACCTTGGTCCTGGCCTTCAGAGCCCAAGGAACTG...CCACGTTTGCTTGTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR TCA 90 bp | CCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAGCATCACAACCCTCCTTaGTCCAGTTCCTTGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQLETLLLVVGPPLRPPQHHNPP*SSSLGS Trigger: AGAGCCCAAGGAACTGGATCAAGGAGGGTTGTGATG...CTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR TCA 90 bp | CCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACAAGCAAACGTGGAAGGCCAGAGCACTGTaGGCCTTGCACAGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPQDTVTLQPPLCHKQTWKARAL*ALHSSL Trigger: CAGAGAACTGTGCAAGGCTCACAGTGCTCTGGCCTT...CCACGTTTGCTTGTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS-3UTR GCA 90 bp | AAGTGCCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACAAGGCAGCTACAACTaGCTCAAGGGAGCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KCPQLETLLLVVGPPLRPQGSYN*LKGAQP Trigger: AGGCTGAGCTCCCTTGAGGCAGTTGTAGCTGCCTTG...TGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGGCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR GCA 90 bp | CCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACACTGCTGTCCAGGTCCTaGGTCTTCTTTCTCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: PAIGDPALSCWTTSPPTTLLSRS*VFFLIT Trigger: GGTGATGAGAAAGAAGACGCAGGACCTGGACAGCAG...TGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR GCA 90 bp | GACAGGGCCAAGTTCTTCGGGGATCTTCACCAGAGCCCAGCGTTCCCGGAGATGCAGAAGTACTGGAGTTaGTGTTTCTACGCCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DRAKFFGDLHQSPAFPEMQKYWS*CFYALL Trigger: GAGCAGGGCGTAGAAACAGCAACTCCAGTACTTCTG...CATCTCCGGGAACGCTGGGCTCTGGTGAAGATCCCCGAAGAACTTGGCCCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| CDS-3UTR GCA 90 bp | ATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAGGACACCATAGTGGCCTTGGGTaGAGTGACAGGGCCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IGDPALSCWTTSPPTTGHHSGLG*SDRAKF Trigger: GAACTTGGCCCTGTCACTGCACCCAAGGCCACTATG...GTGTCCTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
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| CDS-3UTR GCA 90 bp | GTGCCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCTCTCGTTGTGTTAGCTaGAGCCTCAGCACCAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: VPAIGDPALSCWTTSPPTSRCVS*SLSTRS Trigger: TGATCTGGTGCTGAGGCTGCAGCTAACACAACGAGA...GGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
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| CDS-3UTR GCA 90 bp | CTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACAAGCAACAGAGTCCCACACTTTaGCCATCTGACCATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRPPQDTVTLQPPLCHKQQSPTL*PSDHPG Trigger: TCCTGGATGGTCAGATGGGCAAAGTGTGGGACTCTG...TTGCTTGTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
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| CDS-3UTR CCA 90 bp | AGTACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCCGGAGTCGAAGCGTCCATTGTTaGCATCTACTTCCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: STEPAEARRGCQISLTRSRSVHC*HLLPLS Trigger: GCTCAGAGGAAGTAGATGCCAACAATGGACGCTTCG...ACTCCGGGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS-3UTR CCA 90 bp | ATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAGGACACCATGAGGTACGTCTCTaGGGCTGGATGCTGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IGDPALSCWTTSPPTTGHHEVRL*GWMLCG Trigger: TCCACACAGCATCCAGCCCCAGAGACGTACCTCATG...GTGTCCTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| 3UTR CAA 72 bp | CTGAGACTTCTCCAGATGGGGCAAGGTGGGGCCAGGTaGTATCTCCAGAATGGCCTGCACTGTTGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLLQMGQGGAR*YLQNGLHCCFC Trigger: GCAGAAGCAACAGTGCAGGCCATTCTGGAGATACAACCTGGCCCCACCTTGCCCCATCTGGAGAAGTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| CDS-3UTR GCA 90 bp | ACTGTTGCTTCTGCATGGGGCATAGTGGCCTTGGGTGCAGTGACAGGGCCAAGTGAGCTCAGCCTGCACTaGAAGGTCTCATACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: TVASAWGIVALGAVTGPSELSLH*KVSYTL Trigger: CAGTGTGTATGAGACCTTGCAGTGCAGGCTGAGCTC...ACTTGGCCCTGTCACTGCACCCAAGGCCACTATGCCCCATGCAGAAGCAACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| CDS-3UTR GCA 90 bp | CAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAGGACTCCTGTACCTGTCTCTaGAGAGTCTCCTTCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLETLLLVVGPPLRPPQDSCTCL*RVSFSA Trigger: GGCAGAGAAGGAGACTCTGCAGAGACAGGTACAGGA...GTCCTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS-3UTR GCA 90 bp | CCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACACAGAAGTACTGGAGTTaGTGTTTCTACGCCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAIGDPALSCWTTSPPTTQKYWS*CFYALL Trigger: GAGCAGGGCGTAGAAACAGCAACTCCAGTACTTCTG...TGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS-3UTR CCA 90 bp | ATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAGGACACCTGCCCCAGAAGTACTaGAGTTGCTGTTTCTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: IGDPALSCWTTSPPTTGHLPQKY*SCCFYA Trigger: GGCGTAGAAACAGCAACTCCAGTACTTCTGGGGCAG...GTGTCCTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS-3UTR CCA 90 bp | AAGTGCCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACTGCCCCAGAAGTACTaGAGTTGCTGTTTCTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: KCPQLETLLLVVGPPLRPLPQKY*SCCFYA Trigger: GGCGTAGAAACAGCAACTCCAGTACTTCTGGGGCAG...TGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGGCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| 3UTR CAA 72 bp | GCAGCCACAGACTTCCAGGTGTATATGTCACTGGGTTaGGAACTCAGGGCCCTGTGCGTGCTAGGCCTATAC | + |
|
Preference number: 4 (lower is better) Translates to: AATDFQVYMSLG*ELRALCVLGLY Trigger: GTATAGGCCTAGCACGCACAGGGCCCTGAGTTCCAAACCCAGTGACATATACACCTGGAAGTCTGTGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| CDS-3UTR GCA 90 bp | AACATTAGTACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCTCCTGTACCTGTCTCTaGAGAGTCTCCTTCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NISTEPAEARRGCQISLTSCTCL*RVSFSA Trigger: GGCAGAGAAGGAGACTCTGCAGAGACAGGTACAGGA...GGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACTAATGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS-3UTR GCA 90 bp | AACATTAGTACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCACTTCAACTTCTCAATaGTCCCCTGGAGCTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NISTEPAEARRGCQISLTTSTSQ*SPGAAP Trigger: TGGGGCAGCTCCAGGGGAGCATTGAGAAGTTGAAGT...GGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACTAATGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
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| CDS-3UTR GCA 90 bp | ATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAGGACACAATGGCCTGCACTGTTaGTTCTGCATGGGGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: IGDPALSCWTTSPPTTGHNGLHC*FCMGHS Trigger: ACTATGCCCCATGCAGAAGCAACAGTGCAGGCCATT...GTGTCCTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
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| CDS-3UTR GCA 90 bp | CCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACAAGCAAACGTGGATCTCCAGAATGGCCTaGACTGTTGCTTCTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PPQDTVTLQPPLCHKQTWISRMA*TVASAW Trigger: CCATGCAGAAGCAACAGTGCAGGCCATTCTGGAGAT...CCACGTTTGCTTGTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
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| CDS-3UTR CCA 90 bp | CCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACAAGCAAACGTGGCGAAGCGTCCATTGTTaGCATCTACTTCCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPQDTVTLQPPLCHKQTWRSVHC*HLLPLS Trigger: GCTCAGAGGAAGTAGATGCCAACAATGGACGCTTCG...CCACGTTTGCTTGTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGACAACTTTGTGGCGTCCATCCTCATTCCACCTTTATGTGGGAGCTGGGCTTGATCCAGTTCCTTaGGCTCTGAAGGCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: QRTTLWRPSSFHLYVGAGLDPVP*ALKART Trigger: GGTCCTGGCCTTCAGAGCCCAAGGAACTGGATCAAG...CCCAGCTCCCACATAAAGGTGGAATGAGGATGGACGCCACAAAGTTGTCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| CDS-3UTR CCA 90 bp | AAGTGCCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCAGTTGTATCTCCAGAATaGCCTGCACTGTTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KCPQLETLLLVVGPPLRPVVSPE*PALLLL Trigger: CAGAAGCAACAGTGCAGGCCATTCTGGAGATACAAC...TGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGGCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
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| 3UTR CAA 72 bp | CTGCTGAGGCTGGCAATTAAACTCAAGTGCCCGCAATaGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRLAIKLKCPQ*ETLLLVVGPPL Trigger: GAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGGCACTTGAGTTTAATTGCCAGCCTCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS-3UTR CCA 90 bp | AACATTAGTACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCAGGTCTCATACACACTaGGTACTGATATCTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NISTEPAEARRGCQISLTRSHTH*VLISQQ Trigger: CTGCTGAGATATCAGTACCCAGTGTGTATGAGACCT...GGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACTAATGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS-3UTR CCA 90 bp | ATGTATTCTGCAGAAGACTCCCACATGTTCTATAAGGGCTGGGACCAATGCAGGGGGCTGGATGCTGTGTaGAAAGGCACCCAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MYSAEDSHMFYKGWDQCRGLDAV*KGTQSS Trigger: AGAGCTTTGGGTGCCTTTCCACACAGCATCCAGCCC...CCTGCATTGGTCCCAGCCCTTATAGAACATGTGGGAGTCTTCTGCAGAATACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| CDS-3UTR CCA 90 bp | CTCAATTTAACAACAGTAACAACGGGTGATATTGTGGATGTCAGAGGACAACTTAGGTCTCATACACACTaGGTACTGATATCTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNLTTVTTGDIVDVRGQLRSHTH*VLISQQ Trigger: CTGCTGAGATATCAGTACCCAGTGTGTATGAGACCT...AAGTTGTCCTCTGACATCCACAATATCACCCGTTGTTACTGTTGTTAAATTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| CDS GCA 90 bp | GCAGAGTCTCCTTCTCTGCCTGGGCGTCCTGCAGTGAAGCCTGAGTaGATGCCAGCTCATCCTCCCGGTTGCACAGGGCTAGCCGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AESPSLPGRPAVKPE*MPAHPPGCTGLAAA Trigger: GGCTGCGGCTAGCCCTGTGCAACCGGGAGGATGAGCTGGCATGCACTCAGGCTTCACTGCAGGACGCCCAGGCAGAGAAGGAGACTCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS TCA 90 bp | CCTCCCGGTTGCACAGGGCTAGCCGCAGCCAGGCGTTCCTCTCTATaGGGCGAGCAGCCTCCTGCTGTCCAGGTCCTGCGTCTTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PPGCTGLAAARRSSL*GEQPPAVQVLRLLS Trigger: AGAAAGAAGACGCAGGACCTGGACAGCAGGAGGCTGCTCGCCTCATAGAGAGGAACGCCTGGCTGCGGCTAGCCCTGTGCAACCGGGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS GCA 90 bp | GGCGTTCCTCTCTATGAGGCGAGCAGCCTCCTGCTGTCCAGGTCCTaGGTCTTCTTTCTCATCACCAAAGGGCCCCGGAGCCCCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GVPLYEASSLLLSRS*VFFLITKGPRSPLV Trigger: GACCAGGGGGCTCCGGGGCCCTTTGGTGATGAGAAAGAAGACGCAGGACCTGGACAGCAGGAGGCTGCTCGCCTCATAGAGAGGAACGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACAAGAGCTCATCCTCCCGGTaGCACAGGGCTAGCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLRPPQDTVTLQPPLCHKSSSSR*HRASRS Trigger: GCTGCGGCTAGCCCTGTGCAACCGGGAGGATGAGCT...CTTGTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS GCA 90 bp | GCTAGCCGCAGCCAGGCGTTCCTCTCTATGAGGCGAGCAGCCTCCTaGTGTCCAGGTCCTGCGTCTTCTTTCTCATCACCAAAGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASRSQAFLSMRRAAS*CPGPASSFSSPKGP Trigger: GGGGCCCTTTGGTGATGAGAAAGAAGACGCAGGACCTGGACAGCAGGAGGCTGCTCGCCTCATAGAGAGGAACGCCTGGCTGCGGCTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS-3UTR CAA 90 bp | CCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACGTCACTCCGGAGGCGTaGGAGAAAGGGGTGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPLRPPQDTVTLQPPLCHVTPEA*EKGVSH Trigger: ATGGCTCACCCCTTTCTCCAACGCCTCCGGAGTGAC...GTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS TCA 90 bp | TACCTGTCTCTGCAGAGTCTCCTTCTCTGCCTGGGCGTCCTGCAGTaGAGCCTGAGTGCATGCCAGCTCATCCTCCCGGTTGCACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: YLSLQSLLLCLGVLQ*SLSACQLILPVAQG Trigger: GCCCTGTGCAACCGGGAGGATGAGCTGGCATGCACTCAGGCTTCACTGCAGGACGCCCAGGCAGAGAAGGAGACTCTGCAGAGACAGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS GCA 90 bp | CTACGCCCTGCTCTGAGGATGGGGGTAGGTGGGGAGGCCTCCATCTaGATCAGGGAATCCTCCAGCTCCTGTACCTGTCTCTGCAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LRPALRMGVGGEASI*IRESSSSCTCLCRV Trigger: GACTCTGCAGAGACAGGTACAGGAGCTGGAGGATTCCCTGATGCAGATGGAGGCCTCCCCACCTACCCCCATCCTCAGAGCAGGGCGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS GCA 90 bp | TCTCTGGGGCTGGATGCTGTGTGGAAAGGCACCCAAAGCTCTGGGTaGTGGAGTCACTCCGGAGGCGTTGGAGAAAGGGGTGAGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SLGLDAVWKGTQSSG*WSHSGGVGERGEPW Trigger: CCATGGCTCACCCCTTTCTCCAACGCCTCCGGAGTGACTCCAGCACCCAGAGCTTTGGGTGCCTTTCCACACAGCATCCAGCCCCAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS CCA 90 bp | GGGTGCTGGAGTCACTCCGGAGGCGTTGGAGAAAGGGGTGAGCCATaGAAGAGTCCTGAGGTACCCAGGGTCTCCTTTCTGCCCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GCWSHSGGVGERGEP*KSPEVPRVSFLPQK Trigger: CTTCTGGGGCAGAAAGGAGACCCTGGGTACCTCAGGACTCTTCCATGGCTCACCCCTTTCTCCAACGCCTCCGGAGTGACTCCAGCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS CCA 90 bp | CTGGGGCTGGATGCTGTGTGGAAAGGCACCCAAAGCTCTGGGTGCTaGAGTCACTCCGGAGGCGTTGGAGAAAGGGGTGAGCCATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGLDAVWKGTQSSGC*SHSGGVGERGEPWK Trigger: CTTCCATGGCTCACCCCTTTCTCCAACGCCTCCGGAGTGACTCCAGCACCCAGAGCTTTGGGTGCCTTTCCACACAGCATCCAGCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS-3UTR CAA 90 bp | ATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAGGACACCCTCCTCCTCGCTGCTaGGGTCCTCGCTACTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IGDPALSCWTTSPPTTGHPPPRC*GPRYCL Trigger: GAGGCAGTAGCGAGGACCCAAGCAGCGAGGAGGAGG...GTGTCCTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
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| CDS GCA 90 bp | CTTAATGCTGAGGCTCTCACAACGGCCCTTGTAGCCCCCTGGAGCTaGCCCATCTGGTCTTCCATGAGGTACGTCTCTGGGGCTGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: LNAEALTTALVAPWS*PIWSSMRYVSGAGC Trigger: GCATCCAGCCCCAGAGACGTACCTCATGGAAGACCAGATGGGGCAGCTCCAGGGGGCTACAAGGGCCGTTGTGAGAGCCTCAGCATTAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| CDS CCA 90 bp | CTGGAGCTGCCCCATCTGGTCTTCCATGAGGTACGTCTCTGGGGCTaGATGCTGTGTGGAAAGGCACCCAAAGCTCTGGGTGCTGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LELPHLVFHEVRLWG*MLCGKAPKALGAGV Trigger: GACTCCAGCACCCAGAGCTTTGGGTGCCTTTCCACACAGCATCCAGCCCCAGAGACGTACCTCATGGAAGACCAGATGGGGCAGCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS GCA 90 bp | AGCTGCCCCATCTGGTCTTCCATGAGGTACGTCTCTGGGGCTGGATaGTGTGTGGAAAGGCACCCAAAGCTCTGGGTGCTGGAGTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SCPIWSSMRYVSGAG*CVERHPKLWVLESL Trigger: GAGTGACTCCAGCACCCAGAGCTTTGGGTGCCTTTCCACACAGCATCCAGCCCCAGAGACGTACCTCATGGAAGACCAGATGGGGCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS CCA 90 bp | ACTGGAGTTGCTGTTTCTACGCCCTGCTCTGAGGATGGGGGTAGGTaGGGAGGCCTCCATCTGCATCAGGGAATCCTCCAGCTCCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TGVAVSTPCSEDGGR*GGLHLHQGILQLLY Trigger: GTACAGGAGCTGGAGGATTCCCTGATGCAGATGGAGGCCTCCCCACCTACCCCCATCCTCAGAGCAGGGCGTAGAAACAGCAACTCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS-3UTR CAA 90 bp | CCACCTCTCCGCCCACCACAGGACACTGTGACACTCCAGCCACCTCTGTGTCACGTCTCGAAGCGTCCATaGTTGGCATCTACTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PPLRPPQDTVTLQPPLCHVSKRP*LASTSS Trigger: AGAGGAAGTAGATGCCAACAATGGACGCTTCGAGAC...GTGACACAGAGGTGGCTGGAGTGTCACAGTGTCCTGTGGTGGGCGGAGAGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS TCA 90 bp | CACAACGGCCCTTGTAGCCCTGGAGCACAGCCAGAAGAAGACGGTTaGAGCACTTCAACTTCTCAATGCTCCCCTGGAGCTGCCCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: HNGPCSPGAQPEEDG*STSTSQCSPGAAPS Trigger: AGATGGGGCAGCTCCAGGGGAGCATTGAGAAGTTGAAGTGCTTCAACCGTCTTCTTCTGGCTGTGCTCCAGGGCTACAAGGGCCGTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
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| CDS GCA 90 bp | TGGCGCAAGGCAGCTACAACTGCCTCAAGGGAGCTCAGCCTGCACTaGAAGGTCTCATACACACTGGGTACTGATATCTCAGCAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WRKAATTASRELSLH*KVSYTLGTDISAGP Trigger: TGGCCCTGCTGAGATATCAGTACCCAGTGTGTATGAGACCTTGCAGTGCAGGCTGAGCTCCCTTGAGGCAGTTGTAGCTGCCTTGCGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS CCA 90 bp | GGTCCTGCGTCTTCTTTCTCATCACCAAAGGGCCCCGGAGCCCCCTaGTCTCTGTCTTCTGCTTCCACTGACTTTGGAAAGCTTAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPASSFSSPKGPGAP*SLSSASTDFGKLSE Trigger: CTCGCTAAGCTTTCCAAAGTCAGTGGAAGCAGAAGACAGAGACCAGGGGGCTCCGGGGCCCTTTGGTGATGAGAAAGAAGACGCAGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS-3UTR CAA 90 bp | GGCCAAGGCCAGAGCACTGTGAGCCTTGCACAGTTCTCTGGACAGCTCGGCACTTCGAAGCGTCCATTGTaGGCATCTACTTCCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GQGQSTVSLAQFSGQLGTSKRPL*ASTSSE Trigger: CTCAGAGGAAGTAGATGCCAACAATGGACGCTTCGA...AGTGCCGAGCTGTCCAGAGAACTGTGCAAGGCTCACAGTGCTCTGGCCTTGGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
||
| CDS-3UTR CAA 90 bp | AGACTTCCAGGTGTATATGTCACTGGGTTTGGAACTCAGGGCCCTGTGCGTGCTGTCACTCCGGAGGCGTaGGAGAAAGGGGTGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RLPGVYVTGFGTQGPVRAVTPEA*EKGVSH Trigger: ATGGCTCACCCCTTTCTCCAACGCCTCCGGAGTGAC...AGCACGCACAGGGCCCTGAGTTCCAAACCCAGTGACATATACACCTGGAAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| CDS GCA 90 bp | AGTGGTGGCGCAAGGCAGCTACAACTGCCTCAAGGGAGCTCAGCCTaGACTGCAAGGTCTCATACACACTGGGTACTGATATCTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGGARQLQLPQGSSA*TARSHTHWVLISQQ Trigger: CTGCTGAGATATCAGTACCCAGTGTGTATGAGACCTTGCAGTGCAGGCTGAGCTCCCTTGAGGCAGTTGTAGCTGCCTTGCGCCACCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS GCA 90 bp | AGAAGACGGTTGAAGCACTTCAACTTCTCAATGCTCCCCTGGAGCTaGCCCATCTGGTCTTCCATGAGGTACGTCTCTGGGGCTGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: RRRLKHFNFSMLPWS*PIWSSMRYVSGAGC Trigger: GCATCCAGCCCCAGAGACGTACCTCATGGAAGACCAGATGGGGCAGCTCCAGGGGAGCATTGAGAAGTTGAAGTGCTTCAACCGTCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
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| CDS CCA 90 bp | AACCGCATGGGATCCCACATCACAACCCTCCTTGATCCAGTTCCTTaGGCTCTGAAGGCCAGGACCAAGGTATTCCTGATGCAGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NRMGSHITTLLDPVP*ALKARTKVFLMQLR Trigger: CCTGAGCTGCATCAGGAATACCTTGGTCCTGGCCTTCAGAGCCCAAGGAACTGGATCAAGGAGGGTTGTGATGTGGGATCCCATGCGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS CCA 90 bp | TCTCTGTCTTCTGCTTCCACTGACTTTGGAAAGCTTAGCGAGTGGTaGCGCAAGGCAGCTACAACTGCCTCAAGGGAGCTCAGCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLSSASTDFGKLSEW*RKAATTASRELSLH Trigger: GTGCAGGCTGAGCTCCCTTGAGGCAGTTGTAGCTGCCTTGCGCCACCACTCGCTAAGCTTTCCAAAGTCAGTGGAAGCAGAAGACAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS CCA 90 bp | TGGTCTCTGTCTTCTGCTTCCACTGACTTTGGAAAGCTTAGCGAGTaGTGGCGCAAGGCAGCTACAACTGCCTCAAGGGAGCTCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSLSSASTDFGKLSE*WRKAATTASRELSL Trigger: CAGGCTGAGCTCCCTTGAGGCAGTTGTAGCTGCCTTGCGCCACCACTCGCTAAGCTTTCCAAAGTCAGTGGAAGCAGAAGACAGAGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS-3UTR CAA 90 bp | CCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAGGTCTCGAAGCGTCCATaGTTGGCATCTACTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PQLETLLLVVGPPLRPPQVSKRP*LASTSS Trigger: AGAGGAAGTAGATGCCAACAATGGACGCTTCGAGAC...CTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS-3UTR CAA 90 bp | AGTACAGAGCCTGCAGAGGCCAGAAGGGGGTGCCAGATCTCCTTGACCCGGAGTGCCAGAAGAAGACGGTaGAAGCACTTCAACTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: STEPAEARRGCQISLTRSARRRR*KHFNFS Trigger: TGAGAAGTTGAAGTGCTTCAACCGTCTTCTTCTGGC...ACTCCGGGTCAAGGAGATCTGGCACCCCCTTCTGGCCTCTGCAGGCTCTGTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
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| CDS-3UTR CAA 90 bp | CCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGCCCACCACAGTCTCTACCTCCATGGTaGCTTCCTTCTTCATCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PQLETLLLVVGPPLRPPQSLPPW*LPSSSA Trigger: TGCTGATGAAGAAGGAAGCAACCATGGAGGTAGAGA...CTGTGGTGGGCGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
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| CDS-3UTR CAA 90 bp | ACTCAAGTGCCCGCAATTGGAGACCCTGCTCTTAGTTGTTGGACCACCTCTCCGTCGAAGCGTCCATTGTaGGCATCTACTTCCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TQVPAIGDPALSCWTTSPSKRPL*ASTSSE Trigger: CTCAGAGGAAGTAGATGCCAACAATGGACGCTTCGA...CGGAGAGGTGGTCCAACAACTAAGAGCAGGGTCTCCAATTGCGGGCACTTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS GCA 72 bp | CTCTCAGCTACAGGGTCTAGCTCCCCAGGCAGAGGATaGCTCCCTCGACGGCTTCGGGGCCGTGTGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LSATGSSSPGRG*LPRRLRGRVAR Trigger: CCGGGCCACACGGCCCCGAAGCCGTCGAGGGAGGCATCCTCTGCCTGGGGAGCTAGACCCTGTAGCTGAGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS CAA 72 bp | AGAGCCAGGCGCAGGGCTGTGGCCTCGGCTTCCCGCTaGGCCAGCTTAATGCTGAGGCTCTCACAACGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RARRRAVASASR*ASLMLRLSQRP Trigger: GGGCCGTTGTGAGAGCCTCAGCATTAAGCTGGCCAAGCGGGAAGCCGAGGCCACAGCCCTGCGCCTGGCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS TCA 72 bp | TGCACAGGGCTAGCCGCAGCCAGGCGTTCCTCTCTATaGGGCGAGCAGCCTCCTGCTGTCCAGGTCCTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: CTGLAAARRSSL*GEQPPAVQVLR Trigger: ACGCAGGACCTGGACAGCAGGAGGCTGCTCGCCTCATAGAGAGGAACGCCTGGCTGCGGCTAGCCCTGTGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS GCA 72 bp | CCTTCTCTGCCTGGGCGTCCTGCAGTGAAGCCTGAGTaGATGCCAGCTCATCCTCCCGGTTGCACAGGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PSLPGRPAVKPE*MPAHPPGCTGL Trigger: TAGCCCTGTGCAACCGGGAGGATGAGCTGGCATGCACTCAGGCTTCACTGCAGGACGCCCAGGCAGAGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS GCA 72 bp | GAGGCTCTCACAACGGCCCTTGTAGCCCCCTGGAGCTaGCCCATCTGGTCTTCCATGAGGTACGTCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: EALTTALVAPWS*PIWSSMRYVSG Trigger: CCCAGAGACGTACCTCATGGAAGACCAGATGGGGCAGCTCCAGGGGGCTACAAGGGCCGTTGTGAGAGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212626.2 |
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| CDS CAA 90 bp | GGAAAGGCACCCAAAGCTCTGGGTGCTGGAGTCACTCCGGAGGCGTaGGAGAAAGGGGTGAGCCATGGAAGAGTCCTGAGGTACCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GKAPKALGAGVTPEA*EKGVSHGRVLRYPG Trigger: CCCTGGGTACCTCAGGACTCTTCCATGGCTCACCCCTTTCTCCAACGCCTCCGGAGTGACTCCAGCACCCAGAGCTTTGGGTGCCTTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS GCA 72 bp | CTCTATGAGGCGAGCAGCCTCCTGCTGTCCAGGTCCTaGGTCTTCTTTCTCATCACCAAAGGGCCCCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LYEASSLLLSRS*VFFLITKGPRS Trigger: GCTCCGGGGCCCTTTGGTGATGAGAAAGAAGACGCAGGACCTGGACAGCAGGAGGCTGCTCGCCTCATAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS GCA 72 bp | GCTCTGAGGATGGGGGTAGGTGGGGAGGCCTCCATCTaGATCAGGGAATCCTCCAGCTCCTGTACCTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALRMGVGGEASI*IRESSSSCTCL Trigger: GAGACAGGTACAGGAGCTGGAGGATTCCCTGATGCAGATGGAGGCCTCCCCACCTACCCCCATCCTCAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS GCA 72 bp | AGCACCTCATACACCTCCTCACAGTCCTCACTATACTaGAGAGCCAGGCGCAGGGCTGTGGCCTCGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: STSYTSSQSSLY*RARRRAVASAS Trigger: GGAAGCCGAGGCCACAGCCCTGCGCCTGGCTCTGCAGTATAGTGAGGACTGTGAGGAGGTGTATGAGGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS CCA 72 bp | GCTGTTTCTACGCCCTGCTCTGAGGATGGGGGTAGGTaGGGAGGCCTCCATCTGCATCAGGGAATCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AVSTPCSEDGGR*GGLHLHQGILQ Trigger: CTGGAGGATTCCCTGATGCAGATGGAGGCCTCCCCACCTACCCCCATCCTCAGAGCAGGGCGTAGAAACAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS GCA 72 bp | AGCCAGGCGTTCCTCTCTATGAGGCGAGCAGCCTCCTaGTGTCCAGGTCCTGCGTCTTCTTTCTCATCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SQAFLSMRRAAS*CPGPASSFSSP Trigger: TGGTGATGAGAAAGAAGACGCAGGACCTGGACAGCAGGAGGCTGCTCGCCTCATAGAGAGGAACGCCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS GCA 72 bp | TGCATCAGGGAATCCTCCAGCTCCTGTACCTGTCTCTaGAGAGTCTCCTTCTCTGCCTGGGCGTCCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CIRESSSSCTCL*RVSFSAWASCS Trigger: ACTGCAGGACGCCCAGGCAGAGAAGGAGACTCTGCAGAGACAGGTACAGGAGCTGGAGGATTCCCTGATGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS CCA 72 bp | AGTCACTCCGGAGGCGTTGGAGAAAGGGGTGAGCCATaGAAGAGTCCTGAGGTACCCAGGGTCTCCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SHSGGVGERGEP*KSPEVPRVSFL Trigger: CAGAAAGGAGACCCTGGGTACCTCAGGACTCTTCCATGGCTCACCCCTTTCTCCAACGCCTCCGGAGTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS CCA 72 bp | CCCCATCTGGTCTTCCATGAGGTACGTCTCTGGGGCTaGATGCTGTGTGGAAAGGCACCCAAAGCTCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PHLVFHEVRLWG*MLCGKAPKALG Trigger: ACCCAGAGCTTTGGGTGCCTTTCCACACAGCATCCAGCCCCAGAGACGTACCTCATGGAAGACCAGATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS CAA 90 bp | ATCAGCAGCCTAGAGGCCTCCTTCTCAGCAGCCTGCAGGTCACCCTaGGTAGTTCCAACTCCAGTTCCTAGGCCAGCCATCTTCAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ISSLEASFSAACRSP*VVPTPVPRPAIFRA Trigger: AGCTCTGAAGATGGCTGGCCTAGGAACTGGAGTTGGAACTACCAAGGGTGACCTGCAGGCTGCTGAGAAGGAGGCCTCTAGGCTGCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
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| CDS CCA 72 bp | GGGAGCTCAGCCTGCACTGCAAGGTCTCATACACACTaGGTACTGATATCTCAGCAGGGCCACTATCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSSACTARSHTH*VLISQQGHYPG Trigger: CCCTGGATAGTGGCCCTGCTGAGATATCAGTACCCAGTGTGTATGAGACCTTGCAGTGCAGGCTGAGCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS CAA 72 bp | ACCCAGGGTCTCCTTTCTGCCCCAGAAGTACTGGAGTaGCTGTTTCTACGCCCTGCTCTGAGGATGGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: TQGLLSAPEVLE*LFLRPALRMGV Trigger: TACCCCCATCCTCAGAGCAGGGCGTAGAAACAGCAACTCCAGTACTTCTGGGGCAGAAAGGAGACCCTGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS CCA 72 bp | TCTGCTTCCACTGACTTTGGAAAGCTTAGCGAGTGGTaGCGCAAGGCAGCTACAACTGCCTCAAGGGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SASTDFGKLSEW*RKAATTASREL Trigger: GAGCTCCCTTGAGGCAGTTGTAGCTGCCTTGCGCCACCACTCGCTAAGCTTTCCAAAGTCAGTGGAAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS TCA 72 bp | ATAGAACCGCATGGGATCCCACATCACAACCCTCCTTaGTCCAGTTCCTTGGGCTCTGAAGGCCAGGACCAA | + |
|
Preference number: 6 (lower is better) Translates to: IEPHGIPHHNPP*SSSLGSEGQDQ Trigger: TTGGTCCTGGCCTTCAGAGCCCAAGGAACTGGATCAAGGAGGGTTGTGATGTGGGATCCCATGCGGTTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS GCA 72 bp | GCAAGGCAGCTACAACTGCCTCAAGGGAGCTCAGCCTaGACTGCAAGGTCTCATACACACTGGGTACTGATA | + |
|
Preference number: 6 (lower is better) Translates to: ARQLQLPQGSSA*TARSHTHWVLI Trigger: TATCAGTACCCAGTGTGTATGAGACCTTGCAGTGCAGGCTGAGCTCCCTTGAGGCAGTTGTAGCTGCCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS GCA 72 bp | TTGAAGCACTTCAACTTCTCAATGCTCCCCTGGAGCTaGCCCATCTGGTCTTCCATGAGGTACGTCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LKHFNFSMLPWS*PIWSSMRYVSG Trigger: CCCAGAGACGTACCTCATGGAAGACCAGATGGGGCAGCTCCAGGGGAGCATTGAGAAGTTGAAGTGCTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049184.9 |
||
| CDS CCA 72 bp | GGATCCCACATCACAACCCTCCTTGATCCAGTTCCTTaGGCTCTGAAGGCCAGGACCAAGGTATTCCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GSHITTLLDPVP*ALKARTKVFLM Trigger: CATCAGGAATACCTTGGTCCTGGCCTTCAGAGCCCAAGGAACTGGATCAAGGAGGGTTGTGATGTGGGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
||
| CDS CCA 72 bp | TCTTCTGCTTCCACTGACTTTGGAAAGCTTAGCGAGTaGTGGCGCAAGGCAGCTACAACTGCCTCAAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSASTDFGKLSE*WRKAATTASRE Trigger: CTCCCTTGAGGCAGTTGTAGCTGCCTTGCGCCACCACTCGCTAAGCTTTCCAAAGTCAGTGGAAGCAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS GCA 72 bp | GCAGCTACAACTGCCTCAAGGGAGCTCAGCCTGCACTaGAAGGTCTCATACACACTGGGTACTGATATCTCA | + |
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Preference number: 6 (lower is better) Translates to: AATTASRELSLH*KVSYTLGTDIS Trigger: TGAGATATCAGTACCCAGTGTGTATGAGACCTTGCAGTGCAGGCTGAGCTCCCTTGAGGCAGTTGTAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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| CDS CCA 72 bp | TCGCACTGTTCTTCTGGGCTCAAGGATAGAACCGCATaGGATCCCACATCACAACCCTCCTTGATCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: SHCSSGLKDRTA*DPTSQPSLIQF Trigger: GAACTGGATCAAGGAGGGTTGTGATGTGGGATCCCATGCGGTTCTATCCTTGAGCCCAGAAGAACAGTGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049184.9 ENSMUST00000212626.2 |
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