RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for USH2A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026609

Ensembl transcript IDs: ENSMUST00000060479.14, ENSMUST00000127077.2

Found 944 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGAAGCCCCGCCAGGCTaGCTCTGTGCCCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVEAPPG*LCAQGP
Trigger: GGGGCCCTGGGCACAGAGCCAGCCTGGCGGGGCTTC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGAGGGCGGGGCAGGGTaGGTCCTCAGCTCGGCTGTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVEGGAG*VLSSAV
Trigger: GACAGCCGAGCTGAGGACCCACCCTGCCCCGCCCTC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGGGCAGCGTGGGGCTaGATCAGGAGGGCAAGCCCG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRAAWG*IRRASP
Trigger: CGGGCTTGCCCTCCTGATTCAGCCCCACGCTGCCCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGTGGCCCCTGCGTTTaGGGAGGTGCTTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGGPCV*GGAWAV
Trigger: CACAGCCCAAGCACCTCCTCAAACGCAGGGGCCACC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGGGGGCCAGGCGCCTaGAGAGAAACTGCCGACCCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRGPGA*RETADP
Trigger: TGGGTCGGCAGTTTCTCTTCAGGCGCCTGGCCCCCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCCGGGGGATCCACTTaGTCTGGCGGCAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPGGST*SGGSCA
Trigger: AGCACAGCTGCCGCCAGAGCAAGTGGATCCCCCGGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAGCGCCCGTTAGGGTaGGCAGGCGCATCCCACCTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKRPLG*AGASHL
Trigger: GAGGTGGGATGCGCCTGCGCACCCTAACGGGCGCTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCTCTGGGGGAAGCATaGCCTGAGGCTCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPLGEA*PEAPPP
Trigger: GGGAGGAGGAGCCTCAGGGCATGCTTCCCCCAGAGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCACGGGCTGTCCACTaGACCCTGGGAGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPRAVH*TLGVPG
Trigger: GCCTGGAACTCCCAGGGTGCAGTGGACAGCCCGTGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCCAGGCTGGCTCTGTaGCCAGGGCCCCAGTACTTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVARLAL*PGPQYF
Trigger: GAAGTACTGGGGCCCTGGGCACAGAGCCAGCCTGGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTGAACCCGTGGTGCTaGGAGGCCTCGAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLNPWC*EASRWG
Trigger: GCCCCACCTCGAGGCCTCCCAGCACCACGGGTTCAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTCGCCAGGGGACAGTaGCAGGAGGATCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVARGQ*QEDQPF
Trigger: GAAGGGCTGATCCTCCTGGCACTGTCCCCTGGCGAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGTTGGAGCGGCAGCTaGAAGCCTGGGAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGWSGS*KPGRQQ
Trigger: CTGCTGTCTCCCAGGCTTGCAGCTGCCGCTCCAACC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGGTGGTCTGGCTGTaGCTCCCACATTCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLVVWL*LPHSPS
Trigger: GGAGGGCGAATGTGGGAGGCACAGCCAGACCACCAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGAGTGAGCACAGCCTaGTGTCGTGCAGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRVSTA*CRAGLQ
Trigger: CTGGAGGCCTGCACGACAGCAGGCTGTGCTCACTCG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGTAGTGGCAGCTGCTaGCATGGCCATGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRSGSC*HGHGTG
Trigger: GCCAGTGCCATGGCCATGCCAGCAGCTGCCACTACG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAGACAGTCCCAGGCTaGGACCCAGCCTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQTVPG*DPALLQ
Trigger: CTGCAGCAAGGCTGGGTCCCAGCCTGGGACTGTCTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCATCCCACCTCACGTaGGCTTCCCGGGATCCCTCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVASHLT*ASRDPS
Trigger: TGAGGGATCCCGGGAAGCCCACGTGAGGTGGGATGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCAGAGCAGCACTGGTaGTCTGGCTGTGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPEQHW*SGCASH
Trigger: GTGGGAGGCACAGCCAGACCACCAGTGCTGCTCTGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGCCCAGAGCAGCACTaGTGGTCTGGCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCPEQH*WSGCAS
Trigger: GGAGGCACAGCCAGACCACCAGTGCTGCTCTGGGCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTCCAGATGTGGGGCTaGCTGCCTCAGTGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLQMWG*LPQWWD
Trigger: GTCCCACCACTGAGGCAGCCAGCCCCACATCTGGAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGCACCTCCAGATGTaGGGCTGGCTGCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLHLQM*GWLPQW
Trigger: CCACTGAGGCAGCCAGCCCCACATCTGGAGGTGCAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCCAGTGTCTGGACCTaGGGAGGAGACAGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPSVWT*GGDSPE
Trigger: CTCAGGGCTGTCTCCTCCCCAGGTCCAGACACTGGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGGAGCCCAGTGTCTaGACCTGGGGAGGAGACAGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLEPSV*TWGGDS
Trigger: GCTGTCTCCTCCCCAGGTCCAGACACTGGGCTCCAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGACGGAGGCCATCCTaGAGCCCAGTGTCTGGACCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGRRPS*SPVSGP
Trigger: AGGTCCAGACACTGGGCTCCAGGATGGCCTCCGTCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCTCCAAGCCAGAGATaGACGTGCTGGCTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVAPSQR*TCWLGA
Trigger: AGCCCCAAGCCAGCACGTTCATCTCTGGCTTGGAGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTCCCCCGTTCTTTCTaGGGCCCAGGCAGACGACAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFPRSF*GPGRRH
Trigger: GTGTCGTCTGCCTGGGCCTCAGAAAGAACGGGGGAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGGAAACAGGGTCACTaGGCACGCTCCCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRKQGH*ARSLCC
Trigger: ACAGCAGAGGGAGCGTGCTCAGTGACCCTGTTTCCG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGGGGACACTCCAGCTaGGGTGTAGAGTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRGHSS*GVESLS
Trigger: GCTCAGAGACTCTACACCTCAGCTGGAGTGTCCCCG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTCACCCAAACTCCTTaGGGGGCAGCCTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVTQTP*GAACRV
Trigger: GACTCTGCAGGCTGCCCCTCAAGGAGTTTGGGTGAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAGGGACTCAGGTCATaGAGGGTCTGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKGLRS*RVCWVA
Trigger: CGCCACCCAGCAGACCCTTCATGACCTGAGTCCCTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCTGGGACCCAGCCTTaGTGCAGTCACAGACCTCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVAGTQP*CSHRPH
Trigger: GTGAGGTCTGTGACTGCAGCAAGGCTGGGTCCCAGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGTCATGAAGCTCAGTaGTGGCAGAGGGCACGCGGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCHEAQ*WQRARG
Trigger: CCCGCGTGCCCTCTGCCAGCACTGAGCTTCATGACA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCTGTGAGCTCTCGGTaGAGCCTGCCCGAGAACAAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPVSSR*SLPENK
Trigger: CTTGTTCTCGGGCAGGCTGCACCGAGAGCTCACAGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGATGTGGGGCTGGCTaGCTCAGTGGTGGGACCTCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRCGAG*LSGGTS
Trigger: AGAGGTCCCACCACTGAGGCAGCCAGCCCCACATCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCCCCTGTAGCTGTCTaGACCTCCAGATGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPPVAV*TSRCGA
Trigger: AGCCCCACATCTGGAGGTGCAGACAGCTACAGGGGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGACAGCAGGCCATCTaGAGCCCCGGGAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRQQAI*SPGRHF
Trigger: GAAATGCCTCCCGGGGCTCCAGATGGCCTGCTGTCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGCCTCATCTGGAGCTaGTATCTGGGAGAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGLIWS*YLGEPG
Trigger: TCCGGGCTCTCCCAGATACCAGCTCCAGATGAGGCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCAGCACTGGTGGTCTaGCTGTGCCTCCCACATTCG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVAALVV*LCLPHS
Trigger: CGAATGTGGGAGGCACAGCCAGACCACCAGTGCTGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCTGGCTCCCAGAGGTaGCATAAGGCATTGTGCCGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPGSQR*HKALCR
Trigger: GCGGCACAATGCCTTATGCCACCTCTGGGAGCCAGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCGGGCTTCTTTGGGTaGTGGCAGCGACTACCTTGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPGFFG*WQRLPC
Trigger: GCAAGGTAGTCGCTGCCACCACCCAAAGAAGCCCGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGTCCACTGCACCCTaGGAGTTCCAGGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLSTAP*EFQALT
Trigger: GGTGAGAGCCTGGAACTCCCAGGGTGCAGTGGACAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCTCCCAGGAGACACTaGGGGAGTGTGGTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSPRRH*GSVVRV
Trigger: CACTCTCACCACACTCCCTCAGTGTCTCCTGGGAGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTCTGGAGGACGCTATaGCCTTGTGGCACTCCACCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFWRTL*PCGTPP
Trigger: GGGTGGAGTGCCACAAGGTCATAGCGTCCTCCAGAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGGGTGCTGGTGTCATaGAGCTCAGTGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVWVLVS*SSVLAE
Trigger: CTCTGCCAGCACTGAGCTTCATGACACCAGCACCCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCTTCCCTGTGGGATTaGGAGGCCCTCTCATCACCG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSSLWD*EALSSP
Trigger: CGGTGATGAGAGGGCCTCTCAATCCCACAGGGAAGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGTATGTCCCAGGGCTaGCTCCACAGCCCCCATTTT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRMSQG*LHSPHF
Trigger: AAAATGGGGGCTGTGGAGTCAGCCCTGGGACATACG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCATCGTAGTGGCAGCTaGTGGCATGGCCATGGCACT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVHRSGS*WHGHGT
Trigger: AGTGCCATGGCCATGCCAGCAGCTGCCACTACGATG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGGACCCAGCCTTGCTaGAGTCACAGACCTCACAAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGTQPC*SHRPHK
Trigger: CTTGTGAGGTCTGTGACTGCAGCAAGGCTGGGTCCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGAGTTGGCACACTCTaGGGAGCTGTGCCCAATGTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGVGTL*GAVPNV
Trigger: CACATTGGGCACAGCTCCGCAGAGTGTGCCAACTCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGGGCTCACTTGTTGTaGAGCCCCCACCGGTACACA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVWAHLL*SPHRYT
Trigger: TGTGTACCGGTGGGGGCTGCACAACAAGTGAGCCCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGCAGCCACCACCTGTaGAGGCCAGGATGGCATAAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSSHHL*RPGWHN
Trigger: GTTATGCCATCCTGGCCTGCACAGGTGGTGGCTGCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGAAAGGACAGACCCTaGCCAGCCAGGTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRKDRP*PARCSS
Trigger: TGAGGAGCACCTGGCTGGGCAGGGTCTGTCCTTTCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTACACCCGAGGGCAGTaGAGGCTTGGACACGCACTT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVYTRGQ*RLGHAL
Trigger: AAGTGCGTGTCCAAGCCTGCACTGCCCTCGGGTGTA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGACAGCTACGCCCAGTaGTTGAGGGGTCATGGCAAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVDSYAQ*LRGHGK
Trigger: CTTGCCATGACCCCTCAACCACTGGGCGTAGCTGTC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGGCTTGGGGCTGCTaGAGCAGGTTCTTACTCGGA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLAWGC*SRFLLG
Trigger: TCCGAGTAAGAACCTGCTCCAGCAGCCCCAAGCCAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATGAACGTGCTGGCTTaGGGCTGCTGGAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVMNVLA*GCWSRF
Trigger: GAACCTGCTCCAGCAGCCCCAAGCCAGCACGTTCAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGCTGGCCTCCAGCCTaGGAGGTGCTCTTCTTAAGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGWPPA*EVLFLS
Trigger: ACTTAAGAAGAGCACCTCCCAGGCTGGAGGCCAGCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCCGACTCCAATCACTaGACACCGCTCCTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPDSNH*TPLLLR
Trigger: ACGAAGGAGGAGCGGTGTCCAGTGATTGGAGTCGGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGCCTGAGTGGGTGCTaGTGTCATGAAGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRLSGC*CHEAQC
Trigger: GCACTGAGCTTCATGACACCAGCACCCACTCAGGCG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCATTAGGGCCTGGCTaGGCTCACTTGTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPLGPG*AHLLCS
Trigger: GCTGCACAACAAGTGAGCCCAGCCAGGCCCTAATGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGTAGGAGTGAGCTCTaGGGGCTGGCACACCTTCTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSRSEL*GLAHLL
Trigger: CAGAAGGTGTGCCAGCCCCCAGAGCTCACTCCTACT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCGGTTTCCTACCAGTaGGCCCAGAGCACAACCCTT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPVSYQ*AQSTTL
Trigger: AAGGGTTGTGCTCTGGGCCCACTGGTAGGAAACCGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGACCAGGCCTCATCTaGAGCTGGTATCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGPGLI*SWYLGE
Trigger: CTCTCCCAGATACCAGCTCCAGATGAGGCCTGGTCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTAGACGGCCATGAGTaGAGGGACCAGGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLDGHE*RDQASS
Trigger: AGATGAGGCCTGGTCCCTCCACTCATGGCCGTCTAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCATCGCTGGCTCTCTaGACTCAGTTCAGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVASLAL*TQFSAA
Trigger: TGCGGCACTGAACTGAGTCCAGAGAGCCAGCGATGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCAGGGTCTGTATTGTaGACCACGGGCTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPGSVL*TTGCPL
Trigger: CAGTGGACAGCCCGTGGTCCACAATACAGACCCTGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTGGAGACCTTCCGGTaGGGCAGGTCCAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLETFR*GRSSSA
Trigger: TGCAGAACTGGACCTGCCCCACCGGAAGGTCTCCAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTGGAGGAGACGGTGTaGAATGTGGGCGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVEETV*NVGAWR
Trigger: TCTCCAAGCGCCCACATTCCACACCGTCTCCTCCAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCCATGTCCATGAGCTaGCTGACACTGCGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVAMSMS*LTLRWR
Trigger: TCTCCACCGCAGTGTCAGCCAGCTCATGGACATGGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACACAGGAAGCCCGGTaGGAGAGCCAGGTAATGCAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTQEAR*ESQVMH
Trigger: ATGCATTACCTGGCTCTCTCACCGGGCTTCCTGTGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAATCCATCCTGGCACTaGAGGCACTGTCTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVNPSWH*RHCLPD
Trigger: GTCTGGCAGACAGTGCCTTCAGTGCCAGGATGGATT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGGGTGGAGGTTGCTaGGATGGAGTTTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLGGGC*DGVLLQ
Trigger: CTGCAGCAAAACTCCATCTCAGCAACCTCCACCCAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGAAGGAGGGGCCATaGATACGGGTACTGATTCCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLKEGP*IRVLIP
Trigger: GGGAATCAGTACCCGTATTCATGGCCCCTCCTTCAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCCTATCAACACGCCTaGGTGGGTGCTGGTGTCATG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSYQHA*VGAGVM
Trigger: CATGACACCAGCACCCACTCAGGCGTGTTGATAGGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGGTGGTGGAGCACGTaGGCCTGGAGTTTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRWWST*AWSFSV
Trigger: CACAGAAAAACTCCAGGCTCACGTGCTCCACCACCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTAGACCAGACAACCTaGAGACTGGTTGGAGCGGCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVDQTT*RLVGAA
Trigger: TGCCGCTCCAACCAGTCTTCAGGTTGTCTGGTCTAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGCCTGCTAAGGTGGTaGCTGTCACTTCTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSLLRW*LSLLGL
Trigger: CAAGCCGAGAAGTGACAGTCACCACCTTAGCAGGCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGACTACCTTGCAACTaGCAGCACAACCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRLPCN*QHNQQL
Trigger: CAGCTGCTGGTTGTGCTGTCAGTTGCAAGGTAGTCG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGAGCTCTGGGCTGTaGTGTTTGGTGGTGGGACAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLSSGL*CLVVGH
Trigger: ATGTCCCACCACCAAACATCACAGCCCAGAGCTCAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTGTGTCGGTGTAGATaGGCCCTTTCCCATCCAGCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLCRCR*ALSHPA
Trigger: GGCTGGATGGGAAAGGGCTCATCTACACCGACACAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATGGTAGGAGCCATCTaGGTATCTGGAGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVMVGAI*VSGGAS
Trigger: GGAAGCCCCTCCAGATACTCAGATGGCTCCTACCAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAGTGGTGGGACCTCTaGGGTTTGGGTAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQWWDL*GLGRCP
Trigger: TGGACATCTACCCAAACCTCAGAGGTCCCACCACTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCTCATAGCTGTGAATaGCACCATTGGGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVAHSCE*HHWGAG
Trigger: CCCTGCTCCCCAATGGTGTCATTCACAGCTATGAGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCTCCTTCTTGGTGCTaGAGTTGGTCCACCCGGAAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSPSWC*SWSTRK
Trigger: CTTCCGGGTGGACCAACTTCAGCACCAAGAAGGAGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGCGTTGCTGTCCACTaGGAACAGGGCTTGGTACTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCVAVH*EQGLVL
Trigger: CAGTACCAAGCCCTGTTCTCAGTGGACAGCAACGCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCCGTCCTCCGTCGGTaGCCACGTACTCCTTTAGAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSVLRR*PRTPLD
Trigger: ATCTAAAGGAGTACGTGGTCACCGACGGAGGACGGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTCGGGCGTGTCTCCTaGACCATTGGGAATGCAGTA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLGRVS*TIGNAV
Trigger: TACTGCATTCCCAATGGTGCAGGAGACACGCCCGAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTACAGTCACAGAGCTTaGAAGCATCCGGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVYSHRA*KHPGQQ
Trigger: CTGCTGCCCCGGATGCTTGCAAGCTCTGTGACTGTA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGACACAGGGCTCAGTaGTGTCCACAGGTGTGCATG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRHRAQ*CPQVCM
Trigger: CATGCACACCTGTGGACAGCACTGAGCCCTGTGTCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGCTGGATCCGTTTATaGTCTGGGCTCTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRWIRL*SGLLRE
Trigger: CTCCCTCAAGAGCCCAGAGCATAAACGGATCCAGCG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGCAGCTGTGCTGTGTaGAAGATGACTTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGSCAV*KMTWEL
Trigger: CAGCTCCCAAGTCATCTTGCACACAGCACAGCTGCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGCACCCTTGGGAGGTaGAGGCTTCTACCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSTLGR*RLLPGS
Trigger: ACTTCCAGGTAGAAGCCTGCACCTCCCAAGGGTGCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAGACCCACGGGTGCTaGTTCAAGCGTTCTGACGTA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQTHGC*FKRSDV
Trigger: TACGTCAGAACGCTTGAAGCAGCACCCGTGGGTCTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGAGGCCATCTGGGGGTaGTTGCAATGTTCTCACCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVEAIWG*LQCSHH
Trigger: GTGGTGAGAACATTGCAAGCACCCCCAGATGGCCTC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCAGTGAACTGGATGTaGCAGGCCAGGCTGCTACTT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVAVNWM*QARLLL
Trigger: AAGTAGCAGCCTGGCCTGGCACATCCAGTTCACTGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGAAGCCGTGCTGCCTaGTTCATTGTATGCCACCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGSRAA*FIVCHH
Trigger: GTGGTGGCATACAATGAAGCAGGCAGCACGGCTTCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAAAGTGCTAGGGCCTaGGAATCCACACGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKSARA*ESTRGV
Trigger: CACGCCACGTGTGGATTCCCAGGCCCTAGCACTTTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGCGGATCACAGAGTTaGTTCACTGAGCCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSGSQS*FTEPWR
Trigger: CCTCCACGGCTCAGTGAACCAACTCTGTGATCCGCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATGGCAGGCAGCCAGTaGCATTGCTGGGAGAACTGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVMAGSQ*HCWENC
Trigger: ACAGTTCTCCCAGCAATGCCACTGGCTGCCTGCCAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACAGCACCAGCTGTGTaGCATAAGCATGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTAPAV*HKHGRQ
Trigger: CTGCCTGCCATGCTTATGCCACACAGCTGGTGCTGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAGCCAGTGAGCATTTaGGCACTCGGGTGGACTCCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKPVSI*ALGWTP
Trigger: TGGAGTCCACCCGAGTGCCCAAATGCTCACTGGCTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTGTCACAGCAGCTGTaGCAGCTGGGAGGGAAGACT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLSQQL*QLGGKT
Trigger: AGTCTTCCCTCCCAGCTGCCACAGCTGCTGTGACAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGAATGACAAGGAGTTaGGAAGGGCCACGGCGACTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRMTRS*EGPRRL
Trigger: CAGTCGCCGTGGCCCTTCCCAACTCCTTGTCATTCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAACCTGAAGACTGGTTaGAGCGGCAGCTGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVNLKTG*SGSCKP
Trigger: AGGCTTGCAGCTGCCGCTCCAACCAGTCTTCAGGTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGACTTAGAGCACCCTTaGGAGGTGCAGGCTTCTACC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVDLEHP*EVQAST
Trigger: GGTAGAAGCCTGCACCTCCCAAGGGTGCTCTAAGTC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCCGACAGGGTCTTGTaGTCACTTCTACCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVADRVL*SLLPKH
Trigger: GTGCTTGGGTAGAAGTGACCACAAGACCCTGTCGGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCTCCTCCTCCCACATaGTCACATGCACAACTGTGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVAPPPT*SHAQLC
Trigger: GCACAGTTGTGCATGTGACCATGTGGGAGGAGGAGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGATGATGACAACCTCTaGGGGAAGCATGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVDDDNL*GKHALR
Trigger: CCTCAGGGCATGCTTCCCCCAGAGGTTGTCATCATC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCCCACAGTGTGCTGTaGCTTTCATGGTTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSHSVL*LSWLLG
Trigger: GCCCAGCAACCATGAAAGCCACAGCACACTGTGGGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGAATGAGCACTGGTaGCTTGAACCCGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLNEHW*LEPVVL
Trigger: CAGCACCACGGGTTCAAGCCACCAGTGCTCATTCAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGGCTGAATGAGCACTaGTGGCTTGAACCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVWLNEH*WLEPVV
Trigger: CACCACGGGTTCAAGCCACCAGTGCTCATTCAGCCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGTTGGTGGGTTCACTaGTACAGCAGCCACCACCTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCWWVH*YSSHHL
Trigger: CAGGTGGTGGCTGCTGTACCAGTGAACCCACCAACA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTCCATGTTCTCTGGTaGAGCCTCCTTTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVHVLW*SLLCPG
Trigger: GCCTGGACAAAGGAGGCTCCACCAGAGAACATGGAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACGGCTACTATGGGCTaGAATCCCCCTGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTATMG*NPPVAV
Trigger: GACAGCTACAGGGGGATTCCAGCCCATAGTAGCCGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTGTATGTAAGCCAGTaGGCATTTGGGCACTCGGGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVYVSQ*AFGHSG
Trigger: ACCCGAGTGCCCAAATGCTCACTGGCTTACATACAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGCAGAGGGACACTGTaGAGCTGTAGGTCCTATAAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRRGTL*SCRSYK
Trigger: CTTATAGGACCTACAGCTTCACAGTGTCCCTCTGCG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGATAGGCATCCATCCTaGTTGACTCTGACAGCACGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVDRHPS*LTLTAR
Trigger: CCGTGCTGTCAGAGTCAATCAGGATGGATGCCTATC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTTCGTGTGAGGCTGTaGCCCGATACAGGTATTCTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLRVRL*PDTGIL
Trigger: CAGAATACCTGTATCGGGTCACAGCCTCACACGAAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTGCTGTGTGCAAGATaGCTTGGGAGCTGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVLCAR*LGSCLC
Trigger: GCACAAACAGCTCCCAAGTCATCTTGCACACAGCAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTTAAAGGAGTCTGGTaGGTAGGAGTGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVKGVW*VGVSSG
Trigger: CCCAGAGCTCACTCCTACTCACCAGACTCCTTTAAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGCCTTCAGCTGGTATaGGTATTCCTGGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSLQLV*VFLEWL
Trigger: CAGCCACTCCAGGAATACTCATACCAGCTGAAGGCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAGAGCCCAGCACAGTaGCATTACATGGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQSPAQ*HYMGDE
Trigger: TTCATCCCCCATGTAATGTCACTGTGCTGGGCTCTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTCTCTGCTCCACTGTaGAGTTCATCAGTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLSAPL*SSSVRL
Trigger: CAAGCGGACTGATGAACTTCACAGTGGAGCAGAGAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGCATAACTGTACGTTaGGAAGGGAAGCAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGITVR*EGKQLA
Trigger: AGCCAGCTGCTTCCCTTCTCAACGTACAGTTATGCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTGATTCTGGGCCTGTaGTGTGCAGTGTTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLILGL*CAVLVG
Trigger: ACCCACCAACACTGCACATCACAGGCCCAGAATCAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAACAGGGCTTGGTACTaGGGCATCTCCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVNRAWY*GISFLV
Trigger: CACCAAGAAGGAGATGCCTCAGTACCAAGCCCTGTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGGGAGGTCGCTCTCTaGTACATGGTTCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVREVAL*YMVPCG
Trigger: TCCACAAGGAACCATGTATCAGAGAGCGACCTCCCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGGGTCATTCGTTTCTaGAGAGGTACCAAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGVIRF*RGTKGG
Trigger: ACCTCCCTTGGTACCTCTTCAGAAACGAATGACCCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGCTTACAAACGCACTaGCCTGTCTCAGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGLQTH*PVSVSQ
Trigger: CTGTGACACTGAGACAGGGCAGTGCGTTTGTAAGCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGCAGCCAGTGGCATTaGTGGGAGAACTGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGSQWH*WENCKS
Trigger: GCTTTTACAGTTCTCCCAGCAATGCCACTGGCTGCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGACAGTGACAAGGCCTaGATCTTCCAGTCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVDSDKA*IFQSGD
Trigger: ATCCCCTGACTGGAAGATGCAGGCCTTGTCACTGTC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGACGTCCAAGTGGCTTaGACCAGGAACACAAGTGTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVDVQVA*TRNTSV
Trigger: GACACTTGTGTTCCTGGTGCAAGCCACTTGGACGTC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGGTCCATTGACTCCTaGAGGAGGAAGCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVWSIDS*RRKPPD
Trigger: ATCAGGTGGCTTCCTCCTGCAGGAGTCAATGGACCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGTTCTGGGAAACCTaGAGTAACCGTGTCCCACGA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLFWET*SNRVPR
Trigger: TCGTGGGACACGGTTACTGCAGGTTTCCCAGAACAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGCTCCTCAGAGCTCTaGCAATCCAAAGGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCSSEL*QSKGSH
Trigger: GTGGCTACCTTTGGATTGGCAGAGCTCTGAGGAGCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGTAGTTCTGTCCCTTaGCTGTGTAGACCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCSSVP*LCRPAS
Trigger: GGAGGCTGGTCTACACAGGCAAGGGACAGAACTACA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTTGGGAGCTGTTTGTaGACCCTGCTTGTGTGCATG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLGSCL*TLLVCM
Trigger: CATGCACACAAGCAGGGTGCACAAACAGCTCCCAAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTGCACTTTGCAGGCTaGCTCCAGATGACCGACAAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLHFAG*LQMTDN
Trigger: GTTGTCGGTCATCTGGAGGCAGCCTGCAAAGTGCAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCATGGCTTGACTTCTTaGCAGGGTCACCAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVHGLTS*QGHQVP
Trigger: AGGAACCTGGTGACCCTGGCAAGAAGTCAAGCCATG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAGCACTGCTGTTTGTaGCCCCATCAAGAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKHCCL*PHQECS
Trigger: GGAGCACTCTTGATGGGGGCACAAACAGCAGTGCTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACACCTCCCACAGTGTaGTGTGGCTTTCATGGTTGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTPPTV*CGFHGC
Trigger: GCAACCATGAAAGCCACAGCACACTGTGGGAGGTGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACTTGTAAATGTACCTaGTGCCGGGCTCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTCKCT*CRAPGC
Trigger: GCAACCTGGAGCCCGGCAGCAGGTACATTTACAAGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGTCCTCACTCCAACTaGTACCACCTCCAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSPHSN*YHLQFS
Trigger: CGAGAACTGGAGGTGGTAGCAGTTGGAGTGAGGACT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCTCGACACCTTTCCTaGACTGTTTACAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVARHLS*TVYSHH
Trigger: GTGGTGGCTGTAAACAGTGCAGGAAAGGTGTCGAGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAAGAGCTACAGGTGTaGCCTGCAGAATTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQELQV*PAEFQA
Trigger: CGCTTGGAATTCTGCAGGGCACACCTGTAGCTCTTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGCACCCTCCACTTGTaGAGGCCACAAGGGAGATAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCTLHL*RPQGRY
Trigger: ATATCTCCCTTGTGGCCTGCACAAGTGGAGGGTGCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGAGCATCCCCCGAATaGAGCTTTGGGGGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRASPE*SFGGCK
Trigger: TTTACAGCCCCCAAAGCTGCATTCGGGGGATGCTCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGGTTCACTGAGCCGTaGAGGTTACATTGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVWFTEP*RLHWQG
Trigger: GCCTTGCCAATGTAACCTCCACGGCTCAGTGAACCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTTCCATACTGTAGGTaGCCCCTGCGTTTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFPYCR*PLRLRR
Trigger: CCTCCTCAAACGCAGGGGCCACCTACAGTATGGAAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGCGTGAGCTGTTCTaGGAAACCTGCAGTAACCGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLRELF*ETCSNR
Trigger: ACGGTTACTGCAGGTTTCCCAGAACAGCTCACGCAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTTCTTCTAGGTTGGTaGGACAACCTTCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLLLGW*DNLPSW
Trigger: CCAGCTGGGAAGGTTGTCCCACCAACCTAGAAGAAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGATCCGTTTATGCTCTaGGCTCTTGAGGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVDPFML*ALEGVG
Trigger: GCCAACTCCCTCAAGAGCCCAGAGCATAAACGGATC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCGCTTCTTGTGGAGTaGAGATGCTCAATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVALLVE*RCSMPV
Trigger: CACAGGCATTGAGCATCTCCACTCCACAAGAAGCGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGACAACCTGAAGACTaGTTGGAGCGGCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRQPED*LERQLQ
Trigger: TTGCAGCTGCCGCTCCAACCAGTCTTCAGGTTGTCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGCGTTGTTGCGAGCTaGTGTAGACCAGACAACCTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSVVAS*CRPDNL
Trigger: CAGGTTGTCTGGTCTACACCAGCTCGCAACAACGCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCCTTCTGGATTTCCTaGGAGTGTCCACACAGTCTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVAFWIS*ECPHSL
Trigger: GAGACTGTGTGGACACTCCCAGGAAATCCAGAAGGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCTTGGGATGCCTTCTaGATTTCCTGGGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVAWDAF*ISWECP
Trigger: TGGACACTCCCAGGAAATCCAGAAGGCATCCCAAGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAGCACTGGAAATCTTaGCTCACCATCTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQHWKS*LTISPP
Trigger: TGGGGGAGAGATGGTGAGCCAAGATTTCCAGTGCTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTACACAGGGCTCACTaGAAGTGCATCCGACAGATG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLHRAH*KCIRQM
Trigger: CATCTGTCGGATGCACTTCCAGTGAGCCCTGTGTAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGGAGAGAGGCCATCTaGGGGTGCTTGCAATGTTCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVWREAI*GCLQCS
Trigger: AGAACATTGCAAGCACCCCCAGATGGCCTCTCTCCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATAGGATATCTCTGGTaGAGAGAGGCCATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVIGYLW*REAIWG
Trigger: CCCCCAGATGGCCTCTCTCCACCAGAGATATCCTAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGGGTCCATGTTCTCTaGTGGAGCCTCCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVWVHVL*WSLLCP
Trigger: TGGACAAAGGAGGCTCCACCAGAGAACATGGACCCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGATGTGCAGTGTTGGTaGGTCCATGTTCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVDVQCW*VHVLWW
Trigger: CCACCAGAGAACATGGACCCACCAACACTGCACATC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGGACCTCTGAGGTTTaGGTAGATGTCCACTCACTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGTSEV*VDVHSL
Trigger: CAGTGAGTGGACATCTACCCAAACCTCAGAGGTCCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCACGAGCACTGGCCTaGATTTTGGTGACAGGTAAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVARALA*ILVTGN
Trigger: ATTACCTGTCACCAAAATTCAGGCCAGTGCTCGTGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACAGAGTTGGTTCACTaGGCCGTGGAGGTTACATTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTELVH*AVEVTL
Trigger: CAATGTAACCTCCACGGCTCAGTGAACCAACTCTGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATGGTAGAAGAACTCTaGACCCATCCTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVMVEEL*THPLGG
Trigger: TCCACCCAGAGGATGGGTTCAGAGTTCTTCTACCAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCGAGCCCACAGGAATaGTGTGAGTCAAGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPSPQE*CESSSS
Trigger: ACTTGAACTTGACTCACATCATTCCTGTGGGCTCGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCTTCAACTGCAGGGTaGAATACTCTTCCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSSTAG*NTLPGR
Trigger: GCGACCAGGAAGAGTATTTCACCCTGCAGTTGAAGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCTGCTCCTAGGAACTaGACTCCTTCTTCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPAPRN*TPSSRL
Trigger: CAACCTAGAAGAAGGAGTTCAGTTCCTAGGAGCAGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATCTTCTGGGGGATTTaGAGCAAGTGGCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVIFWGI*SKWLLD
Trigger: ATCCAGCAGCCACTTGCTTCAAATCCCCCAGAAGAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACGTCTATGGCTGTGTaGTTAAGGATGCTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTSMAV*LRMLAV
Trigger: CACCGCAAGCATCCTTAATCACACAGCCATAGACGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAACTGGCCAATGACGTaGAAGTCTACATCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVNWPMT*KSTSGK
Trigger: CTTCCCGGATGTAGACTTTCACGTCATTGGCCAGTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAGGCGATGTCCAGATaGCACGTACAGCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKAMSR*HVQLYC
Trigger: ACAGTACAGCTGTACGTGTCATCTGGACATCGCCTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAACGGCATTTGGGTTTaGAGGCGATGTCCAGATGAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVNGIWV*RRCPDD
Trigger: GTCATCTGGACATCGCCTTCAAACCCAAATGCCGTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCTGATATTGAGAAATaGGGCCGTTGGGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVADIEK*GRWAFL
Trigger: CAGAAAGGCCCAACGGCCTCATTTCTCAATATCAGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAAGAACTGGAGGGCTaGCTTCTGATGGAGGTACCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKELEG*LLMEVP
Trigger: AGGTACCTCCATCAGAAGTCAGCCCTCCAGTTCTTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATTTTTCCATTTGGCTaGAGTGGTCCTGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVIFPFG*SGPAHH
Trigger: GTGGTGGGCAGGACCACTTCAGCCAAATGGAAAAAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCACAAAGAAGCTGATTaGCGTCTGATGCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVHKEAD*RLMHLH
Trigger: GTGCAGGTGCATCAGACGGCAATCAGCTTCTTTGTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTTCTGGCAAAATACTaGCAGTCCTCCCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFLAKY*QSSQGE
Trigger: CTCTCCCTGGGAGGACTGGCAGTATTTTGCCAGAAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTGTACCCAGGACGATaGTTCTGTCCAGATGTCAGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLYPGR*FCPDVR
Trigger: CCTGACATCTGGACAGAAGCATCGTCCTGGGTACAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTCTTGCATGCACACTaGCCAGAAAGCGGATCACAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFLHAH*PESGSQ
Trigger: CTGTGATCCGCTTTCTGGGCAGTGTGCATGCAAGAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGTTTGCAAGGACACTaGCCGGTTGACTTGTCACAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSLQGH*PVDLSH
Trigger: GTGTGACAAGTCAACCGGGCAGTGTCCTTGCAAACT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGCGTTTGAGGAGGTaGTTGGGCTGTGGTTACTAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLRLRR*LGCGYY
Trigger: ATAGTAACCACAGCCCAAGCACCTCCTCAAACGCAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACGGCTGGACACAGATaGCAAGTTAACGACAACACC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTAGHR*QVNDNT
Trigger: GGTGTTGTCGTTAACTTGGCATCTGTGTCCAGCCGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTTGTGGAGTGGAGATaGTCAATGCCTGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLVEWR*SMPVSS
Trigger: AGAGCTCACAGGCATTGAGCATCTCCACTCCACAAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAGAGCACAACCCTTTaGCGTGCATGCTTGAACTTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQSTTL*RACLNL
Trigger: CAAGTTCAAGCATGCACGGCAAAGGGTTGTGCTCTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCCGCTGTGCTGACTTaGGTTCCATTGCTTTTCACG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSAVLT*VPLLFT
Trigger: CGTGAAAAGCAATGGAACGCAAGTCAGCACAGCGGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGTAACTGTATACCATaGCCTCTTCTCCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGNCIP*PLLLHH
Trigger: GTGGTGGAGGAGAAGAGGGCATGGTATACAGTTACC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGTGGCTTTCATGGTTaGTGGGCAGATAGTCGCACA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCGFHG*WADSRT
Trigger: TGTGCGACTATCTGCCCAGCAACCATGAAAGCCACA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAGGTTTTTCAGGTGTaGAGATTGCCGGTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQVFQV*RLPVSD
Trigger: GTCAGACACCGGCAATCTGCACACCTGAAAAACCTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGGCCCTTTTCTCTCTaGTCCACTGTGAAGTTCATC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRPFSL*STVKFI
Trigger: GATGAACTTCACAGTGGAGCAGAGAGAAAAGGGCCG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCACTGTAGAACTCTGTaGTTTTGGTCCCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVHCRTL*FWSLLP
Trigger: AGGGAGCAGGGACCAAAAGCACAGAGTTCTACAGTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCGTGGAGGTTACATTaGCAAGGCTCACATCCATCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPWRLH*QGSHPS
Trigger: TGATGGATGTGAGCCTTGCCAATGTAACCTCCACGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGCCAGTGGCATTGCTaGGAGAACTGTAAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSQWHC*ENCKSL
Trigger: CAGGCTTTTACAGTTCTCCCAGCAATGCCACTGGCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCCGATAAACCAGGATaGAGTCATTTCCCCCACAGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPDKPG*SHFPHS
Trigger: ACTGTGGGGGAAATGACTCCATCCTGGTTTATCGGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAGTGCCAAAGCCATTaGTGGCAACCAACCGAAACT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQCQSH*WQPTET
Trigger: AGTTTCGGTTGGTTGCCACCAATGGCTTTGGCACTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGAACAACTGTGGGCTTaGGATGCCTTCTGGATTTCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVEQLWA*DAFWIS
Trigger: GGAAATCCAGAAGGCATCCCAAGCCCACAGTTGTTC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCCGTTCTGCATAAGTaGGGCTTTCCAAGAGACCTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSVLHK*GFPRDL
Trigger: GAGGTCTCTTGGAAAGCCCCACTTATGCAGAACGGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGAGTCTCTGAGCTCTaGGCTGTGATGTTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRVSEL*AVMFGG
Trigger: ACCACCAAACATCACAGCCCAGAGCTCAGAGACTCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACTCGACTGGAATTTTaGGAAGCAGGTTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTRLEF*EAGSLV
Trigger: CACCAGGGAACCTGCTTCCCAAAATTCCAGTCGAGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGTCCAGTTTAGCATaGCTGAATGAGCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLSSLA*LNEHWW
Trigger: CCACCAGTGCTCATTCAGCCATGCTAAACTGGACAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGTGATGTGCAGTGTTaGTGGGTCCATGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCDVQC*WVHVLW
Trigger: CCAGAGAACATGGACCCACCAACACTGCACATCACA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCTGATCAGGCCATGTaGGTTTCTTGGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSDQAM*VSWRCP
Trigger: TGGACACCTCCAAGAAACCCACATGGCCTGATCAGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAGTTGGCTTTGACTTaGGATCCGCAGTACAGACAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQLALT*DPQYRH
Trigger: GTGTCTGTACTGCGGATCCCAAGTCAAAGCCAACTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGGAGACTGAGTCTGTaGCTGAATCATGGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVWRLSL*LNHGEF
Trigger: GAACTCTCCATGATTCAGTCACAGACTCAGTCTCCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGCTGGATGTGCAAGTaGGGAAAATCTCCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGWMCK*GKSPEK
Trigger: CTTTTCTGGAGATTTTCCTCACTTGCACATCCAGCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCACATGAGAGATCCATaGAGTAGCAACGTCGTCATC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVHMRDP*SSNVVI
Trigger: GATGACGACGTTGCTACTTCATGGATCTCTCATGTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCAGGAGGTCAAAGGTaGCATTACCATGGGAAAACG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSGGQR*HYHGKT
Trigger: CGTTTTCCCATGGTAATGTCACCTTTGACCTCCTGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGGCCTGAATTTTGGTaGCAGGTAATGTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVWPEFW*QVMSPS
Trigger: GGATGGAGACATTACCTGTCACCAAAATTCAGGCCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGTCCATCGTCAAATTaGACCTGTGAGGCTTGCACT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCPSSN*TCEACT
Trigger: AGTGCAAGCCTCACAGGTTCAATTTGACGATGGACA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGCCTAATAGATTGTTaGCGTCCAAGTGGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSLIDC*RPSGLH
Trigger: GTGCAAGCCACTTGGACGTCAACAATCTATTAGGCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCATCTTTGAGCACATaGCTGGAACATCGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPSLST*LEHRVE
Trigger: CTCTACACGATGTTCCAGTCATGTGCTCAAAGATGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTTGCCGTGCATGCTTaGACTTGGAAGGTGTGTAAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFAVHA*TWKVCK
Trigger: CTTACACACCTTCCAAGTTCAAGCATGCACGGCAAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATAAACTTCATGGCTTaGCTTCTTGCCAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVINFMA*LLARVT
Trigger: GGTGACCCTGGCAAGAAGTCAAGCCATGAAGTTTAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTATCTTCCGCTGTGCTaGCTTGCGTTCCATTGCTTT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVYLPLC*LAFHCF
Trigger: AAAGCAATGGAACGCAAGTCAGCACAGCGGAAGATA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAGGGTATTGGCACTTaGCTGCTTTGCAAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQGIGT*LLCKAH
Trigger: ATGAGCTTTGCAAAGCAGTCAAGTGCCAATACCCTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGAAGCTCATAACTTCTaGTCAGGCCATGTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVEAHNF*SGHVGF
Trigger: GAAACCCACATGGCCTGATCAGAAGTTATGAGCTTC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCACATAGTGCCTCCTTaGTCAAGCTTCAACCACACA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVHIVPP*SSFNHT
Trigger: TGTGTGGTTGAAGCTTGAGCAAGGAGGCACTATGTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTTTGGCTTCCTTCTTaGATGCACACTGCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLWLPS*MHTAQK
Trigger: TTTCTGGGCAGTGTGCATGCAAGAAGGAAGCCAAAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACACTGGCCTGTGACTaGATCACAAGTTCCATTCGA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTLACD*ITSSIR
Trigger: TCGAATGGAACTTGTGATGCAGTCACAGGCCAGTGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGGCCATTCTTCAACTaGAGGGTGAAATACTCTTCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRPFFN*RVKYSS
Trigger: GGAAGAGTATTTCACCCTGCAGTTGAAGAATGGCCG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAACGACAACACCCCGTaGAAATGCAACTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVNDNTP*KCNFLH
Trigger: GTGAAGGAAGTTGCATTTGCACGGGGTGTTGTCGTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAGCACTGTATGCAGTaGCAAAGCCATTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKHCMQ*QSHWWQ
Trigger: TTGCCACCAATGGCTTTGGCACTGCATACAGTGCTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGTCCAAGCACTGTATaGAGTGCCAAAGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSPSTV*SAKAIG
Trigger: ACCAATGGCTTTGGCACTGCATACAGTGCTTGGACT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGTTTGGATGGTGGCTaGCAAGAAATCCCAACATCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGLDGG*QEIPTS
Trigger: TGATGTTGGGATTTCTTGGCAGCCACCATCCAAACC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGCATTCGGAGAGAGTaGGATGTATTTGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGIRRE*DVFVLT
Trigger: TGTGAGGACAAATACATCGCACTCTCTCCGAATGCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCGTGTCCAGTTACTTaGAGCTTTGCCTGCAGAATT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPCPVT*SFACRI
Trigger: AATTCTGCAGGCAAAGCTGCAAGTAACTGGACACGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGTCTCCTGCACCATTaGGAATGCAGTACTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCLLHH*ECSTAE
Trigger: TTCAGCAGTACTGCATTCCCAATGGTGCAGGAGACA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACACTATTACAGATGTaGCTCACAGCACCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTLLQM*LTAPAV
Trigger: CACAGCTGGTGCTGTGAGCCACATCTGTAATAGTGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTGTTGACGTCCAAGTaGCTTGCACCAGGAACACAA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLLTSK*LAPGTQ
Trigger: TTGTGTTCCTGGTGCAAGCCACTTGGACGTCAACAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGCATACTCTGTGTGTaGCTCCAAGCCAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCILCV*LQARDE
Trigger: TTCATCTCTGGCTTGGAGCCACACACAGAGTATGCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGCCAAAGCCATTGGTaGCAACCAACCGAAACTCAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCQSHW*QPTETH
Trigger: ATGAGTTTCGGTTGGTTGCCACCAATGGCTTTGGCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCCATTTGGTTTGGATaGTGGCTGCCAAGAAATCCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSIWFG*WLPRNP
Trigger: GGGATTTCTTGGCAGCCACCATCCAAACCAAATGGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGTCACTTCTCGGCTTaGTGTAAAGCCCACACTGTT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCHFSA*CKAHTV
Trigger: AACAGTGTGGGCTTTACACCAAGCCGAGAAGTGACA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTGTCTGTTAACTTCTaGGTTTCAGAGCATGGGCGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLSVNF*VSEHGR
Trigger: GCGCCCATGCTCTGAAACCCAGAAGTTAACAGACAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCATCCAGCCAGAGCTaGTATGCTTTAATGGCATCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPSSQS*YALMAS
Trigger: AGATGCCATTAAAGCATACCAGCTCTGGCTGGATGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCTGTAGTTTGTGTATaGCTGGAGACCTGTAACCGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVAVVCV*LETCNR
Trigger: ACGGTTACAGGTCTCCAGCCATACACAAACTACAGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCCATGCTACAAATATaGAATCAGAGCCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVAMLQI*NQSPAQ
Trigger: CTGTGCTGGGCTCTGATTCCATATTTGTAGCATGGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAGGTTCCCTGGTGTTaGCCATGCTACAAATATGGA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQVPWC*PCYKYG
Trigger: TCCATATTTGTAGCATGGCCAACACCAGGGAACCTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCCACCACACCAATGTaGTATGTTGTGAATGGTTCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVATTPM*YVVNGS
Trigger: GGAACCATTCACAACATACCACATTGGTGTGGTGGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAGGAAATCAGCAGTTaGAGGGGACTCATAGACACA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQEISS*RGLIDT
Trigger: TGTGTCTATGAGTCCCCTCCAACTGCTGATTTCCTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGACACATTCATCTGGTaGGCACTGATGTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVDTFIW*ALMSQR
Trigger: TCTTTGGGACATCAGTGCCCACCAGATGAATGTGTC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGACCTACATACACAATaGCTCCATCTCTCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVDLHTQ*LHLSEA
Trigger: AGCTTCGGAGAGATGGAGCCATTGTGTATGTAGGTC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTACAGTCCACTGCTGTaGCCCATAATAGTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVYSPLL*PIIVSH
Trigger: GTGGGAAACTATTATGGGCCACAGCAGTGGACTGTA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGATGCACCTGCACAGTaGGATGAATCCATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVDAPAQ*DESISS
Trigger: TGAAGAAATGGATTCATCTCACTGTGCAGGTGCATC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTTGAGTGGCTCTCATaGATTCTTGAAGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFEWLS*ILEALS
Trigger: GCTCAGTGCTTCAAGAATTCATGAGAGCCACTCAAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCTTTGTCTCATAAATaGCAGGTATGCTCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVALSHK*QVCSLS
Trigger: CGACAAGGAGCATACCTGTCATTTATGAGACAAAGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATTCCAGATGGTAGCTaGGGTTTCTGGACCTTCATA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVIPDGS*GFWTFI
Trigger: TATGAAGGTCCAGAAACCTCAGCTACCATCTGGAAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAGTCCTTTGCAGCATaGAACGTATCTGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKSFAA*NVSEGS
Trigger: GCTTCCTTCAGATACGTTTCATGCTGCAAAGGACTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCAGATGACTCAACATaGTGGAGCTCATATTGGTCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPDDST*WSSYWS
Trigger: TGACCAATATGAGCTCCATCATGTTGAGTCATCTGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAACCACCGAGTTCCTaGGTAAATATTGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKPPSS*VNIVPQ
Trigger: CTGTGGCACAATATTTACTCAGGAACTCGGTGGTTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTTCAGAGATTCCTCTaGGGTCCCAGAACTCCAAAA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFQRFL*GPRTPK
Trigger: TTTTGGAGTTCTGGGACCTCAGAGGAATCTCTGAAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTGCGTGGACTCCATTaGAAACCAAGAGGAAAACCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLRGLH*KPRGKP
Trigger: AGGTTTTCCTCTTGGTTTTCAATGGAGTCCACGCAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCAGGTTGCTATCAGTaGAACTCTGATTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPGCYQ*NSDYLC
Trigger: GCAGAGATAATCAGAGTTTCACTGATAGCAACCTGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGGGAGATATTATACTaGGTGGAAGGCTGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVREILY*VEGCRL
Trigger: TAACCTGCAGCCTTCCACTCAGTATAATATCTCCCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTCCTTGTCGAACTGTaGACATTGGAGGTCTCTATA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLLVEL*TLEVSI
Trigger: TATAGAGACCTCCAATGTGCACAGTTCGACAAGGAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCTTGTAAAGTTTTCTaGTGGCTTCTCCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSCKVF*WLLPGD
Trigger: GTCTCCTGGGAGAAGCCAGCAGAAAACTTTACAAGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGCCTGATGTCTGACTaGTATGATTTCATGCCACTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSLMSD*YDFMPL
Trigger: GAGTGGCATGAAATCATAGCAGTCAGACATCAGGCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCCCACATGGTCACATaGACAACTGTGCTGTTGATT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSHMVT*TTVLLI
Trigger: AATCAACAGCACAGTTGTGCATGTGACCATGTGGGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAACTATTTCCTCTGCTaGAGAACACAGTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVNYFLC*RTQSFH
Trigger: GTGGAAGGACTGTGTTCTGCAGCAGAGGAAATAGTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCCTGGTGTTGGCCATaGTACAAATATGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPWCWP*YKYGIR
Trigger: TCTGATTCCATATTTGTAGCATGGCCAACACCAGGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTCAGTGAAGCTGTGTaGAGAGCAGAGACATCTGTA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFSEAV*RAETSV
Trigger: TACAGATGTCTCTGCTCTCCACACAGCTTCACTGAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACAGTACTGGGTGAATaGAACCAGATTCCAGATGGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTVLGE*NQIPDG
Trigger: ACCATCTGGAATCTGGTTCCATTCACCCAGTACTGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGTAAAGTTTTCTGCTaGCTTCTCCCAGGAGACACT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCKVFC*LLPGDT
Trigger: AGTGTCTCCTGGGAGAAGCCAGCAGAAAACTTTACA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGTTTCCACCGTACATaGATAGTCCTAGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCFHRT*IVLESR
Trigger: CCTGGATTCTAGGACTATCCATGTACGGTGGAAACA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACGATGCAGAAGGAATaGGGAATAATTCTAGACGGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTMQKE*GIILDG
Trigger: GCCGTCTAGAATTATTCCCCATTCCTTCTGCATCGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATTTGGTTTGGATGGTaGCTGCCAAGAAATCCCAAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVIWFGW*LPRNPN
Trigger: GTTGGGATTTCTTGGCAGCCACCATCCAAACCAAAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTGGTCCATTTGGTTTaGATGGTGGCTGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLVHLV*MVAAKK
Trigger: TTTCTTGGCAGCCACCATCCAAACCAAATGGACCAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAAATTTGGTCCATTTaGTTTGGATGGTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQIWSI*FGWWLP
Trigger: TGGCAGCCACCATCCAAACCAAATGGACCAAATTTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGAAGCAAGTGGCTGCTaGATTTTACATCTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVEASGC*ILHLRS
Trigger: GCTTCTGAGATGTAAAATCCAGCAGCCACTTGCTTC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCACAGTGACATTACATaGGGGATGAATGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVHSDIT*GMNVFW
Trigger: CCAGAAGACATTCATCCCCCATGTAATGTCACTGTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTGGTATGTAGAGTGTaGTGTCTAGGCCACTGTACA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLVCRV*CLGHCT
Trigger: TGTACAGTGGCCTAGACACCACACTCTACATACCAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTTGTCCACCATCCTTaGTATGTAGAGTGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFVHHP*YVECGV
Trigger: GACACCACACTCTACATACCAAGGATGGTGGACAAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTCGTGCAGGTGACCTaGAAGAAGAAAATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVVQVT*KKKILS
Trigger: GGACAAAATTTTCTTCTTCCAGGTCACCTGCACGAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAGTGCAGCCTTATTTaGGTGGCTCTCATGAATTCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKCSLI*VALMNS
Trigger: AGAATTCATGAGAGCCACTCAAATAAGGCTGCACTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGTCATACCCAAGAATaGTACCATTTGGATTTGCTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRHTQE*YHLDLL
Trigger: CAGCAAATCCAAATGGTATCATTCTTGGGTATGACG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCATGTAATTTCTATTaGTTCTGGGCCTGTGATGTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPCNFY*FWACDV
Trigger: CACATCACAGGCCCAGAATCAATAGAAATTACATGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACTTTGAACACAATCTaGCCGTCCACTGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTLNTI*PSTVFS
Trigger: AGAAAAGACAGTGGACGGGCAGATTGTGTTCAAAGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCTGAGATGGAGTTTTaGTGCAGCCTAATAGATTGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVAEMEF*CSLIDC
Trigger: ACAATCTATTAGGCTGCAGCAAAACTCCATCTCAGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACTGCTATGATTTCATaGCACTCTCCATCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTAMIS*HSPSLY
Trigger: ATACAGGGATGGAGAGTGGCATGAAATCATAGCAGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCTGGAGTTTTTCTGTaGTGTTATAGACAACACTCC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPGVFL*CYRQHS
Trigger: GGAGTGTTGTCTATAACAGCACAGAAAAACTCCAGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGTGTAGTTGTCACCTaGTTGATCTGCATAGAAACT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGVVVT*LICIET
Trigger: AGTTTCTATGCAGATCAAGCAGGTGACAACTACACC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAACTGTGCTGTTGATTaGGTGGACTCCATTGAAAAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVNCAVD*VDSIEN
Trigger: GTTTTCAATGGAGTCCACGCAATCAACAGCACAGTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAGCCAGAGCTGGTATaGTTTAATGGCATCTTTCAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQPELV*FNGIFH
Trigger: ATGAAAGATGCCATTAAAGCATACCAGCTCTGGCTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACCCATGCATTCCCTTaGGTGTTGTATTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTHAFP*VLYSVK
Trigger: TTTCACAGAATACAACACGCAAGGGAATGCATGGGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTCATTATACACCCATaGATTCCCTTGCGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVIIHP*IPLRVV
Trigger: TACAACACGCAAGGGAATGCATGGGTGTATAATGAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTCTTCCTTTCTAGATaGTACAAAGGAGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFFLSR*YKGGGP
Trigger: TGGACCACCTCCTTTGTACCATCTAGAAAGGAAGAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCCACAAAACCTCTTTaGATTATCTCAAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPTKPL*IISSLF
Trigger: GAAGAGGCTTGAGATAATCCAAAGAGGTTTTGTGGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCCCATTTGCTTGTCTaGGTAGACTCCAAAAGAATG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSHLLV*VDSKRM
Trigger: CATTCTTTTGGAGTCTACCCAGACAAGCAAATGGGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACTTTTCCAGGGTATTaGCACTTGACTGCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTFPGY*HLTALQ
Trigger: TTGCAAAGCAGTCAAGTGCCAATACCCTGGAAAAGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACAACACAGCATTCCTaGGAGGTAACTGTATACCAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTTQHS*EVTVYH
Trigger: ATGGTATACAGTTACCTCCCAGGAATGCTGTGTTGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTATGATTTTTCCATTTaGCTGAAGTGGTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVYDFSI*LKWSCP
Trigger: TGGGCAGGACCACTTCAGCCAAATGGAAAAATCATA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTCCCTGTTTGTAAGTaGCACATTGTACAATCGAAA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLPVCK*HIVQSK
Trigger: TTTCGATTGTACAATGTGTCACTTACAAACAGGGAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATACTCTTAAATCTGTaGCTGTGTAGTTCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVILLNL*LCSSVP
Trigger: AGGGACAGAACTACACAGTCACAGATTTAAGAGTAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACAGCATATGGTCTCTaGCATATTCACATAATCCTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTAYGL*HIHIIL
Trigger: CAGGATTATGTGAATATGTCAGAGACCATATGCTGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTTACATCTCCAGAATaGACTATTTCCTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFTSPE*TISSAA
Trigger: TGCAGCAGAGGAAATAGTTCATTCTGGAGATGTAAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAATGATCTCATCCACTaGATAGTATTGGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVNDLIH*IVLVSP
Trigger: TGGAGACACCAATACTATGCAGTGGATGAGATCATT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGATTCCTATAAAATCTaGGTGAGCTGTTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVDSYKI*VSCSGK
Trigger: TTTCCCAGAACAGCTCACGCAGATTTTATAGGAATC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGAATTCCATTTAGTTaGCTTGGTTGTTTCCACCGT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRIPFS*LGCFHR
Trigger: ACGGTGGAAACAACCAAGGCAACTAAATGGAATTCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTTGAAGCAAGTGGCTaGTGGATTTTACATCTCAGA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFEASG*WILHLR
Trigger: TCTGAGATGTAAAATCCAGCAGCCACTTGCTTCAAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAACACTGCAATTTCTaGCAAAATACTGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKHCNF*QNTASP
Trigger: AGGACTGGCAGTATTTTGCCAGAAATTGCAGTGTTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACAGAAAAACAGTACTaGGTGAATGGAACCAGATTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTEKQY*VNGTRF
Trigger: GAATCTGGTTCCATTCACCCAGTACTGTTTTTCTGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCACATTGATAAGAATTaGAGCATCTATAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVHIDKN*SIYRSR
Trigger: CCTGGACCTATAGATGCTCCAATTCTTATCAATGTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTCGTATCTCAAATTTaGTCCATTTGGTTTGGATGG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLVSQI*SIWFGW
Trigger: CCATCCAAACCAAATGGACCAAATTTGAGATACGAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATGTTTGTAAACACATaGGAGATCCATGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVMFVNT*EIHEVA
Trigger: TGCTACTTCATGGATCTCTCATGTGTTTACAAACAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCACCTTGTAGATCTTaGAATGTTGGTTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSPCRS*NVGFFH
Trigger: ATGGAAGAAACCAACATTTCAAGATCTACAAGGTGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR TCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCCTCACCATCGCATTaGAGCAAATATTTAACAATC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSSPSH*SKYLTI
Trigger: GATTGTTAAATATTTGCTTCAATGCGATGGTGAGGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGCTGTCCACAGGTGTaGATGATAAAACATATTTTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCCPQV*MIKHIL
Trigger: CAAAATATGTTTTATCATGCACACCTGTGGACAGCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCCGTAGCTGTTCCATaGAGAAATTCTATATTCATA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPVAVP*RNSIFI
Trigger: TATGAATATAGAATTTCTGCATGGAACAGCTACGGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATGACTTTAAGCACCTaGTACTGTCCATTTTCTAAG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVMTLST*YCPFSK
Trigger: CTTAGAAAATGGACAGTACCAGGTGCTTAAAGTCAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATAAAATCAGGAAGCTaGAGACAGTTGACAGAATTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVIKSGS*RQLTEL
Trigger: CAATTCTGTCAACTGTCTCCAGCTTCCTGATTTTAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCGAACTGTGCACATTaGAGGTCTCTATATAATATG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSNCAH*RSLYNM
Trigger: CATATTATATAGAGACCTCCAATGTGCACAGTTCGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACCATTTGGATTTGCTaGTGTTGTCCAATCTATTTG +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTIWIC*CCPIYL
Trigger: CAAATAGATTGGACAACACCAGCAAATCCAAATGGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAGAATGATACCATTTaGATTTGCTGGTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKNDTI*ICWCCP
Trigger: TGGACAACACCAGCAAATCCAAATGGTATCATTCTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAGCTGAACAGCATATaGTCTCTGACATATTCACAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKLNSI*SLTYSH
Trigger: ATGTGAATATGTCAGAGACCATATGCTGTTCAGCTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCAAACCATTTACTGTaGGATAATAAAACATGGTCT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVANHLL*DNKTWS
Trigger: AGACCATGTTTTATTATCGCACAGTAAATGGTTTGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATTCTTCCAACAAACTaGTCTGAACCATTTAAACTC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVILPTN*SEPFKL
Trigger: GAGTTTAAATGGTTCAGAGCAGTTTGTTGGAAGAAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR GCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTACAATCGAAAATCTTaGATTCTTCCAACAAACTGC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVYNRKS*ILPTNC
Trigger: GCAGTTTGTTGGAAGAATGCAAGATTTTCGATTGTA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGTCATTACTTTTATTaGAGGCTGCAAACCATTTAC +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCHYFY*RLQTIY
Trigger: GTAAATGGTTTGCAGCCTCCAATAAAAGTAATGACA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CCA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCTGTGACTGAATCATaGAGAGTTCTTGTATCAAAT +
Preference number: 4 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSVTES*RVLVSN
Trigger: ATTTGATACAAGAACTCTCCATGATTCAGTCACAGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp AGTGTCTGGACCTGGGGAGGAGACAGCCCTGAGGGCGGGGCAGGGTaGGTCCTCAGCTCGGCTGTCGGGCCTCGGCTGCAGCAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: SVWTWGGDSPEGGAG*VLSSAVGPRLQQLK
Trigger: CTTCAACTGCTGCAGCCGAGGCCCGACAGCCGAGCTGAGGACCCACCCTGCCCCGCCCTCAGGGCTGTCTCCTCCCCAGGTCCAGACACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CCACGGCGACTGGTGCCTGCACCTCCTGGGGCGCTTCTTGTGGAGTaGAGATGCTCAATGCCTGTGAGCTCTCGGTGCAGCCTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: PRRLVPAPPGALLVE*RCSMPVSSRCSLPE
Trigger: CTCGGGCAGGCTGCACCGAGAGCTCACAGGCATTGAGCATCTCCACTCCACAAGAAGCGCCCCAGGAGGTGCAGGCACCAGTCGCCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp TCCCGGCACAGCACACCTGGCTCCCAGAGGTGGCATAAGGCATTGTaGCGCAGCAGGCATCACCAAAGCCCACGGACACCCGGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: SRHSTPGSQRWHKAL*RSRHHQSPRTPGCA
Trigger: GGCACAACCGGGTGTCCGTGGGCTTTGGTGATGCCTGCTGCGGCACAATGCCTTATGCCACCTCTGGGAGCCAGGTGTGCTGTGCCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TTGACCACCGCTCGGGTGGAGGAGACGGTGTGGAATGTGGGCGCTTaGAGACCTTCCGGTGGGGCAGGTCCAGTTCTGCACCGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: LTTARVEETVWNVGA*RPSGGAGPVLHRVQ
Trigger: CTGGACACGGTGCAGAACTGGACCTGCCCCACCGGAAGGTCTCCAAGCGCCCACATTCCACACCGTCTCCTCCACCCGAGCGGTGGTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp CGATGCTCGGGCGTGTCTCCTGCACCATTGGGAATGCAGTACTGCTaGACGGAGGGGTGGACACGGGGGTGGCTACCTGGACATCGGCAA +
Preference number: 5 (lower is better)
Translates to: RCSGVSPAPLGMQYC*TEGWTRGWLPGHRQ
Trigger: TTGCCGATGTCCAGGTAGCCACCCCCGTGTCCACCCCTCCGTTCAGCAGTACTGCATTCCCAATGGTGCAGGAGACACGCCCGAGCATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GGAGAGCCCGGAGCGTTGTTGCGAGCTGGTGTAGACCAGACAACCTaGAGACTGGTTGGAGCGGCAGCTGCAAGCCTGGGAGACAGCAGG +
Preference number: 5 (lower is better)
Translates to: GEPGALLRAGVDQTT*RLVGAAAASLGDSR
Trigger: CCTGCTGTCTCCCAGGCTTGCAGCTGCCGCTCCAACCAGTCTTCAGGTTGTCTGGTCTACACCAGCTCGCAACAACGCTCCGGGCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GCCGTGACATTCGATGCTCGGGCGTGTCTCCTGCACCATTGGGAATaGAGTACTGCTGAACGGAGGGGTGGACACGGGGGTGGCTACCTG +
Preference number: 5 (lower is better)
Translates to: AVTFDARACLLHHWE*STAERRGGHGGGYL
Trigger: CAGGTAGCCACCCCCGTGTCCACCCCTCCGTTCAGCAGTACTGCATTCCCAATGGTGCAGGAGACACGCCCGAGCATCGAATGTCACGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CGACTGGTGCCTGCACCTCCTGGGGCGCTTCTTGTGGAGTGGAGATaGTCAATGCCTGTGAGCTCTCGGTGCAGCCTGCCCGAGAACAAG +
Preference number: 5 (lower is better)
Translates to: RLVPAPPGALLVEWR*SMPVSSRCSLPENK
Trigger: CTTGTTCTCGGGCAGGCTGCACCGAGAGCTCACAGGCATTGAGCATCTCCACTCCACAAGAAGCGCCCCAGGAGGTGCAGGCACCAGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GACAAGGAGTTGGGAAGGGCCACGGCGACTGGTGCCTGCACCTCCTaGGGCGCTTCTTGTGGAGTGGAGATGCTCAATGCCTGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: DKELGRATATGACTS*GASCGVEMLNACEL
Trigger: GAGCTCACAGGCATTGAGCATCTCCACTCCACAAGAAGCGCCCCAGGAGGTGCAGGCACCAGTCGCCGTGGCCCTTCCCAACTCCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CTGGGGGCTGGCACACCTTCTGGAATCGTCTCCTCCATTAGGGCCTaGCTGGGCTCACTTGTTGTGCAGCCCCCACCGGTACACACTCTC +
Preference number: 5 (lower is better)
Translates to: LGAGTPSGIVSSIRA*LGSLVVQPPPVHTL
Trigger: GAGAGTGTGTACCGGTGGGGGCTGCACAACAAGTGAGCCCAGCCAGGCCCTAATGGAGGAGACGATTCCAGAAGGTGTGCCAGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GGGCCTCTGGCTCTGTCCAGTTTAGCATGGCTGAATGAGCACTGGTaGCTTGAACCCGTGGTGCTGGGAGGCCTCGAGGTGGGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: GPLALSSLAWLNEHW*LEPVVLGGLEVGLP
Trigger: TGGAAGCCCCACCTCGAGGCCTCCCAGCACCACGGGTTCAAGCCACCAGTGCTCATTCAGCCATGCTAAACTGGACAGAGCCAGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TGGGGGCCTCTGGCTCTGTCCAGTTTAGCATGGCTGAATGAGCACTaGTGGCTTGAACCCGTGGTGCTGGGAGGCCTCGAGGTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: WGPLALSSLAWLNEH*WLEPVVLGGLEVGL
Trigger: AAGCCCCACCTCGAGGCCTCCCAGCACCACGGGTTCAAGCCACCAGTGCTCATTCAGCCATGCTAAACTGGACAGAGCCAGAGGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GAAGGCACACTGATGTTGACCACCGCTCGGGTGGAGGAGACGGTGTaGAATGTGGGCGCTTGGAGACCTTCCGGTGGGGCAGGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: EGTLMLTTARVEETV*NVGAWRPSGGAGPV
Trigger: AACTGGACCTGCCCCACCGGAAGGTCTCCAAGCGCCCACATTCCACACCGTCTCCTCCACCCGAGCGGTGGTCAACATCAGTGTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GATTCAGCCGTGACATTCGATGCTCGGGCGTGTCTCCTGCACCATTaGGAATGCAGTACTGCTGAACGGAGGGGTGGACACGGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: DSAVTFDARACLLHH*ECSTAERRGGHGGG
Trigger: GCCACCCCCGTGTCCACCCCTCCGTTCAGCAGTACTGCATTCCCAATGGTGCAGGAGACACGCCCGAGCATCGAATGTCACGGCTGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CTATCAACACGCCTGAGTGGGTGCTGGTGTCATGAAGCTCAGTGCTaGCAGAGGGCACGCGGGGCTGGGAGCTGTCCTCACTGTAGGCTT +
Preference number: 5 (lower is better)
Translates to: LSTRLSGCWCHEAQC*QRARGAGSCPHCRL
Trigger: AAGCCTACAGTGAGGACAGCTCCCAGCCCCGCGTGCCCTCTGCCAGCACTGAGCTTCATGACACCAGCACCCACTCAGGCGTGTTGATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp AGCTGTGGAAGGGATGAAGTCCTATCAACACGCCTGAGTGGGTGCTaGTGTCATGAAGCTCAGTGCTGGCAGAGGGCACGCGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SCGRDEVLSTRLSGC*CHEAQCWQRARGAG
Trigger: CCCAGCCCCGCGTGCCCTCTGCCAGCACTGAGCTTCATGACACCAGCACCCACTCAGGCGTGTTGATAGGACTTCATCCCTTCCACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp CACCTCCTGGGGCGCTTCTTGTGGAGTGGAGATGCTCAATGCCTGTaGGCTCTCGGTGCAGCCTGCCCGAGAACAAGCAGTCAGGGTTAC +
Preference number: 5 (lower is better)
Translates to: HLLGRFLWSGDAQCL*ALGAACPRTSSQGY
Trigger: GTAACCCTGACTGCTTGTTCTCGGGCAGGCTGCACCGAGAGCTCACAGGCATTGAGCATCTCCACTCCACAAGAAGCGCCCCAGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp CAGGCCTCAACCCCAATGGTGTATGTGGTGAAGGGACTCAGGTCATaGAGGGTCTGCTGGGTGGCGGTGCCTTCAGACAGCGTGACGTGC +
Preference number: 5 (lower is better)
Translates to: QASTPMVYVVKGLRS*RVCWVAVPSDSVTC
Trigger: GCACGTCACGCTGTCTGAAGGCACCGCCACCCAGCAGACCCTTCATGACCTGAGTCCCTTCACCACATACACCATTGGGGTTGAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CTTCAACTGCAGGGTGAAATACTCTTCCTGGTCGCCAGGGGACAGTaGCAGGAGGATCAGCCCTTCAGGCACCCTTGTCCGGAAGCTGGC +
Preference number: 5 (lower is better)
Translates to: LQLQGEILFLVARGQ*QEDQPFRHPCPEAG
Trigger: GCCAGCTTCCGGACAAGGGTGCCTGAAGGGCTGATCCTCCTGGCACTGTCCCCTGGCGACCAGGAAGAGTATTTCACCCTGCAGTTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp TTATGCTCTGGGCTCTTGAGGGAGTTGGCACACTCTGCGGAGCTGTaGCCAATGTGCGTCCCCGACTCCAATCACTGGACACCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LCSGLLRELAHSAEL*PMCVPDSNHWTPLL
Trigger: GAGGAGCGGTGTCCAGTGATTGGAGTCGGGGACGCACATTGGGCACAGCTCCGCAGAGTGTGCCAACTCCCTCAAGAGCCCAGAGCATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CCACAGCAGGCTCATTCCAGGCCACCTCAACGCTGGATCCGTTTATaGTCTGGGCTCTTGAGGGAGTTGGCACACTCTGCGGAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: PQQAHSRPPQRWIRL*SGLLRELAHSAELC
Trigger: GCACAGCTCCGCAGAGTGTGCCAACTCCCTCAAGAGCCCAGAGCATAAACGGATCCAGCGTTGAGGTGGCCTGGAATGAGCCTGCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp AGGTGGGGCTTCCAGGGTCTGTATTGTGGACCACGGGCTGTCCACTaGACCCTGGGAGTTCCAGGCTCTCACCCGGTACTCATACAGTGT +
Preference number: 5 (lower is better)
Translates to: RWGFQGLYCGPRAVH*TLGVPGSHPVLIQC
Trigger: ACACTGTATGAGTACCGGGTGAGAGCCTGGAACTCCCAGGGTGCAGTGGACAGCCCGTGGTCCACAATACAGACCCTGGAAGCCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CACATGCTCAGCCGCCACCGGGCTACGACAAAAAGTGCTAGGGCCTaGGAATCCACACGTGGCGTGGGTTGGCACAGTGGATACCTTCCT +
Preference number: 5 (lower is better)
Translates to: HMLSRHRATTKSARA*ESTRGVGWHSGYLP
Trigger: AGGAAGGTATCCACTGTGCCAACCCACGCCACGTGTGGATTCCCAGGCCCTAGCACTTTTTGTCGTAGCCCGGTGGCGGCTGAGCATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CATCTGGAGCTGGTATCTGGGAGAGCCCGGAGCGTTGTTGCGAGCTaGTGTAGACCAGACAACCTGAAGACTGGTTGGAGCGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HLELVSGRARSVVAS*CRPDNLKTGWSGSC
Trigger: GCAGCTGCCGCTCCAACCAGTCTTCAGGTTGTCTGGTCTACACCAGCTCGCAACAACGCTCCGGGCTCTCCCAGATACCAGCTCCAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp ATTGGTGGGCCCCACAGACTGGATGGTAGGAGCCATCTGAGTATCTaGAGGGGCTTCCTCTGTCCAGAGAGGCTGAGGCACCGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: IGGPHRLDGRSHLSI*RGFLCPERLRHRVS
Trigger: GCTCACTCGGTGCCTCAGCCTCTCTGGACAGAGGAAGCCCCTCCAGATACTCAGATGGCTCCTACCATCCAGTCTGTGGGGCCCACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GGTGGAGGAGACGGTGTGGAATGTGGGCGCTTGGAGACCTTCCGGTaGGGCAGGTCCAGTTCTGCACCGTGTCCAGTTACTTGCAGCTTT +
Preference number: 5 (lower is better)
Translates to: GGGDGVECGRLETFR*GRSSSAPCPVTCSF
Trigger: AAAGCTGCAAGTAACTGGACACGGTGCAGAACTGGACCTGCCCCACCGGAAGGTCTCCAAGCGCCCACATTCCACACCGTCTCCTCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp ATTCCAGGCCACCTCAACGCTGGATCCGTTTATGCTCTGGGCTCTTaGGGGAGTTGGCACACTCTGCGGAGCTGTGCCCAATGTGCGTCC +
Preference number: 5 (lower is better)
Translates to: IPGHLNAGSVYALGS*GSWHTLRSCAQCAS
Trigger: GGACGCACATTGGGCACAGCTCCGCAGAGTGTGCCAACTCCCTCAAGAGCCCAGAGCATAAACGGATCCAGCGTTGAGGTGGCCTGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CTGGATCCGTTTATGCTCTGGGCTCTTGAGGGAGTTGGCACACTCTaGGGAGCTGTGCCCAATGTGCGTCCCCGACTCCAATCACTGGAC +
Preference number: 5 (lower is better)
Translates to: LDPFMLWALEGVGTL*GAVPNVRPRLQSLD
Trigger: GTCCAGTGATTGGAGTCGGGGACGCACATTGGGCACAGCTCCGCAGAGTGTGCCAACTCCCTCAAGAGCCCAGAGCATAAACGGATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CAAAAGAATGACAAGGAGTTGGGAAGGGCCACGGCGACTGGTGCCTaGACCTCCTGGGGCGCTTCTTGTGGAGTGGAGATGCTCAATGCC +
Preference number: 5 (lower is better)
Translates to: QKNDKELGRATATGA*TSWGASCGVEMLNA
Trigger: GGCATTGAGCATCTCCACTCCACAAGAAGCGCCCCAGGAGGTGCAGGCACCAGTCGCCGTGGCCCTTCCCAACTCCTTGTCATTCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CAGGACAGTCAAACCCGGGGGATCCACTTGCTCTGGCGGCAGCTGTaGTGTGTGCAAGATGACTTGGGAGCTGTTTGTGCACCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: QDSQTRGIHLLWRQL*CVQDDLGAVCAPCL
Trigger: CAAGCAGGGTGCACAAACAGCTCCCAAGTCATCTTGCACACAGCACAGCTGCCGCCAGAGCAAGTGGATCCCCCGGGTTTGACTGTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp AAGGATTCTAGCGTAATGCCCAGAGCAGCACTGGTGGTCTGGCTGTaGCTCCCACATTCGCCCTCCACAGCAAACCCCAGTGGCATTCGG +
Preference number: 5 (lower is better)
Translates to: KDSSVMPRAALVVWL*LPHSPSTANPSGIR
Trigger: CCGAATGCCACTGGGGTTTGCTGTGGAGGGCGAATGTGGGAGGCACAGCCAGACCACCAGTGCTGCTCTGGGCATTACGCTAGAATCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp TGGAATCCCCCTGTAGCTGTCTGCACCTCCAGATGTGGGGCTGGCTaGCTCAGTGGTGGGACCTCTGAGGTTTGGGTAGATGTCCACTCA +
Preference number: 5 (lower is better)
Translates to: WNPPVAVCTSRCGAG*LSGGTSEVWVDVHS
Trigger: TGAGTGGACATCTACCCAAACCTCAGAGGTCCCACCACTGAGGCAGCCAGCCCCACATCTGGAGGTGCAGACAGCTACAGGGGGATTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GGAATGTGGGCGCTTGGAGACCTTCCGGTGGGGCAGGTCCAGTTCTaGACCGTGTCCAGTTACTTGCAGCTTTGCCTGCAGAATTCACCG +
Preference number: 5 (lower is better)
Translates to: GMWALGDLPVGQVQF*TVSSYLQLCLQNSP
Trigger: CGGTGAATTCTGCAGGCAAAGCTGCAAGTAACTGGACACGGTGCAGAACTGGACCTGCCCCACCGGAAGGTCTCCAAGCGCCCACATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GCAGGCTCATTCCAGGCCACCTCAACGCTGGATCCGTTTATGCTCTaGGCTCTTGAGGGAGTTGGCACACTCTGCGGAGCTGTGCCCAAT +
Preference number: 5 (lower is better)
Translates to: AGSFQATSTLDPFML*ALEGVGTLCGAVPN
Trigger: ATTGGGCACAGCTCCGCAGAGTGTGCCAACTCCCTCAAGAGCCCAGAGCATAAACGGATCCAGCGTTGAGGTGGCCTGGAATGAGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CACGCACTGTGGGTGGCTGTACTCCGGAAGGCCGACAGGGTCTTGTaGTCACTTCTACCCAAGCACTGCTGTTTGTGCCCCCATCAAGAG +
Preference number: 5 (lower is better)
Translates to: HALWVAVLRKADRVL*SLLPKHCCLCPHQE
Trigger: CTCTTGATGGGGGCACAAACAGCAGTGCTTGGGTAGAAGTGACCACAAGACCCTGTCGGCCTTCCGGAGTACAGCCACCCACAGTGCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TCCGTTCTGCATAAGTGGGGCTTTCCAAGAGACCTCGACTGTATCTaGTGCCAGCACACGCACTGTGGGTGGCTGTACTCCGGAAGGCCG +
Preference number: 5 (lower is better)
Translates to: SVLHKWGFPRDLDCI*CQHTHCGWLYSGRP
Trigger: CGGCCTTCCGGAGTACAGCCACCCACAGTGCGTGTGCTGGCACCAGATACAGTCGAGGTCTCTTGGAAAGCCCCACTTATGCAGAACGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CACGGACACCCGGTTGTGCCTCTCATCGGGGCAGCATATCTCTCCTaGAAGGATTCTAGCGTAATGCCCAGAGCAGCACTGGTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: HGHPVVPLIGAAYLS*KDSSVMPRAALVVW
Trigger: CCAGACCACCAGTGCTGCTCTGGGCATTACGCTAGAATCCTTCCAGGAGAGATATGCTGCCCCGATGAGAGGCACAACCGGGTGTCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp CTGGGAATCCACACGTGGCGTGGGTTGGCACAGTGGATACCTTCCTaGAAGCACCCACATTCTCCAGCCTTGGGAAAACGCCCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: LGIHTWRGLAQWIPS*KHPHSPALGKRPVR
Trigger: CCTCACAGGGCGTTTTCCCAAGGCTGGAGAATGTGGGTGCTTTCAGGAAGGTATCCACTGTGCCAACCCACGCCACGTGTGGATTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp TGTGCGTCCCCGACTCCAATCACTGGACACCGCTCCTCCTTCGTGTaGGGCTGTGACCCGATACAGGTATTCTGTAAAGGGCTGGAGACC +
Preference number: 5 (lower is better)
Translates to: CASPTPITGHRSSFV*GCDPIQVFCKGLET
Trigger: GGTCTCCAGCCCTTTACAGAATACCTGTATCGGGTCACAGCCTCACACGAAGGAGGAGCGGTGTCCAGTGATTGGAGTCGGGGACGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GCGCTTCTTGTGGAGTGGAGATGCTCAATGCCTGTGAGCTCTCGGTaGAGCCTGCCCGAGAACAAGCAGTCAGGGTTACCGTGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: ALLVEWRCSMPVSSR*SLPENKQSGLPCSC
Trigger: ACAGCTACACGGTAACCCTGACTGCTTGTTCTCGGGCAGGCTGCACCGAGAGCTCACAGGCATTGAGCATCTCCACTCCACAAGAAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GTCAAACCCGGGGGATCCACTTGCTCTGGCGGCAGCTGTGCTGTGTaGAAGATGACTTGGGAGCTGTTTGTGCACCCTGCTTGTGTGCAT +
Preference number: 5 (lower is better)
Translates to: VKPGGSTCSGGSCAV*KMTWELFVHPACVH
Trigger: ATGCACACAAGCAGGGTGCACAAACAGCTCCCAAGTCATCTTGCACACAGCACAGCTGCCGCCAGAGCAAGTGGATCCCCCGGGTTTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp TGGTCACTTCTACCCAAGCACTGCTGTTTGTGCCCCCATCAAGAGTaGTCCCCAGAACCCGGTATTCATAGCGTGTCCAAGGGCGGAGGG +
Preference number: 5 (lower is better)
Translates to: WSLLPKHCCLCPHQE*SPEPGIHSVSKGGG
Trigger: CCCTCCGCCCTTGGACACGCTATGAATACCGGGTTCTGGGGAGCACTCTTGATGGGGGCACAAACAGCAGTGCTTGGGTAGAAGTGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GTTCTGCATAAGTGGGGCTTTCCAAGAGACCTCGACTGTATCTGGTaGCAGCACACGCACTGTGGGTGGCTGTACTCCGGAAGGCCGACA +
Preference number: 5 (lower is better)
Translates to: VLHKWGFPRDLDCIW*QHTHCGWLYSGRPT
Trigger: TGTCGGCCTTCCGGAGTACAGCCACCCACAGTGCGTGTGCTGGCACCAGATACAGTCGAGGTCTCTTGGAAAGCCCCACTTATGCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TCCCATTTGCTTGTCTGGGTAGACTCCAAAAGAATGACAAGGAGTTaGGAAGGGCCACGGCGACTGGTGCCTGCACCTCCTGGGGCGCTT +
Preference number: 5 (lower is better)
Translates to: SHLLVWVDSKRMTRS*EGPRRLVPAPPGAL
Trigger: AAGCGCCCCAGGAGGTGCAGGCACCAGTCGCCGTGGCCCTTCCCAACTCCTTGTCATTCTTTTGGAGTCTACCCAGACAAGCAAATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CTTTCCAAGAGACCTCGACTGTATCTGGTGCCAGCACACGCACTGTaGGTGGCTGTACTCCGGAAGGCCGACAGGGTCTTGTGGTCACTT +
Preference number: 5 (lower is better)
Translates to: LSKRPRLYLVPAHAL*VAVLRKADRVLWSL
Trigger: AAGTGACCACAAGACCCTGTCGGCCTTCCGGAGTACAGCCACCCACAGTGCGTGTGCTGGCACCAGATACAGTCGAGGTCTCTTGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CTGTACACCCTCCGTCCTCCGTCGGTGACCACGTACTCCTTTAGATaGCCGTTCAGGAGAAAAGTGCCACTCCAGTCCACCCACACCATG +
Preference number: 5 (lower is better)
Translates to: LYTLRPPSVTTYSFR*PFRRKVPLQSTHTM
Trigger: CATGGTGTGGGTGGACTGGAGTGGCACTTTTCTCCTGAACGGCCATCTAAAGGAGTACGTGGTCACCGACGGAGGACGGAGGGTGTACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp CACGCTCCCTCTGCTGTTAGAAGCATTCACTTGTACCATGTAGTGTaGGCAAGGAACCAGTCCGTCCACCAGCACCCAGAGCCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: HAPSAVRSIHLYHVV*ARNQSVHQHPEPAS
Trigger: GGAAGCCGGCTCTGGGTGCTGGTGGACGGACTGGTTCCTTGCTCACACTACATGGTACAAGTGAATGCTTCTAACAGCAGAGGGAGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp AGAGTGTGGTGTCTAGGCCACTGTACACCCTCCGTCCTCCGTCGGTaGCCACGTACTCCTTTAGATGGCCGTTCAGGAGAAAAGTGCCAC +
Preference number: 5 (lower is better)
Translates to: RVWCLGHCTPSVLRR*PRTPLDGRSGEKCH
Trigger: GTGGCACTTTTCTCCTGAACGGCCATCTAAAGGAGTACGTGGTCACCGACGGAGGACGGAGGGTGTACAGTGGCCTAGACACCACACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GACAGCACGGCTGGACACAGATGCCAAGTTAACGACAACACCCCGTaGAAATGCAACTTCCTTCACGCAACCACGGAACCCTGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: DSTAGHRCQVNDNTP*KCNFLHATTEPWLQ
Trigger: CTGGAGCCAGGGTTCCGTGGTTGCGTGAAGGAAGTTGCATTTGCACGGGGTGTTGTCGTTAACTTGGCATCTGTGTCCAGCCGTGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp TGGATAGTCCTAGAATCCAGGACAGTCAAACCCGGGGGATCCACTTaGTCTGGCGGCAGCTGTGCTGTGTGCAAGATGACTTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: WIVLESRTVKPGGST*SGGSCAVCKMTWEL
Trigger: CAGCTCCCAAGTCATCTTGCACACAGCACAGCTGCCGCCAGAGCAAGTGGATCCCCCGGGTTTGACTGTCCTGGATTCTAGGACTATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GCCGACAGGGTCTTGTGGTCACTTCTACCCAAGCACTGCTGTTTGTaGCCCCATCAAGAGTGCTCCCCAGAACCCGGTATTCATAGCGTG +
Preference number: 5 (lower is better)
Translates to: ADRVLWSLLPKHCCL*PHQECSPEPGIHSV
Trigger: CACGCTATGAATACCGGGTTCTGGGGAGCACTCTTGATGGGGGCACAAACAGCAGTGCTTGGGTAGAAGTGACCACAAGACCCTGTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GGGCTACGACAAAAAGTGCTAGGGCCTGGGAATCCACACGTGGCGTaGGTTGGCACAGTGGATACCTTCCTGAAAGCACCCACATTCTCC +
Preference number: 5 (lower is better)
Translates to: GLRQKVLGPGNPHVA*VGTVDTFLKAPTFS
Trigger: GGAGAATGTGGGTGCTTTCAGGAAGGTATCCACTGTGCCAACCCACGCCACGTGTGGATTCCCAGGCCCTAGCACTTTTTGTCGTAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GAGGGGTCATGGCAAGAGCACTGTCCCGTGACACTATTACAGATGTaGCTCACAGCACCAGCTGTGTGGCATAAGCATGGCAGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: EGSWQEHCPVTLLQM*LTAPAVWHKHGRQP
Trigger: TGGCTGCCTGCCATGCTTATGCCACACAGCTGGTGCTGTGAGCCACATCTGTAATAGTGTCACGGGACAGTGCTCTTGCCATGACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TTCTTCCCTGTGGGATTGAGAGGCCCTCTCATCACCGTGCAGATATaGGTGGTGGCGTTGAAGTCACACCTCCCACAGTGTGCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: FFPVGLRGPLITVQI*VVALKSHLPQCAVA
Trigger: AGCCACAGCACACTGTGGGAGGTGTGACTTCAACGCCACCACCCATATCTGCACGGTGATGAGAGGGCCTCTCAATCCCACAGGGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TTCTGGGCCTGTGATGTGCAGTGTTGGTGGGTCCATGTTCTCTGGTaGAGCCTCCTTTGTCCAGGCGGATGTGGTCCTACTAGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: FWACDVQCWWVHVLW*SLLCPGGCGPTSSA
Trigger: TGCACTGCTAGTAGGACCACATCCGCCTGGACAAAGGAGGCTCCACCAGAGAACATGGACCCACCAACACTGCACATCACAGGCCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GATGGCCGTTCAGGAGAAAAGTGCCACTCCAGTCCACCCACACCATaGATGCGTTGCTGTCCACTGAGAACAGGGCTTGGTACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: DGRSGEKCHSSPPTP*MRCCPLRTGLGTEA
Trigger: TGCCTCAGTACCAAGCCCTGTTCTCAGTGGACAGCAACGCATCCATGGTGTGGGTGGACTGGAGTGGCACTTTTCTCCTGAACGGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GTCATCATTGATGAAGGAGAGAGGGTGGGCTTCGGGATTCAGCCGTaGCATTCGATGCTCGGGCGTGTCTCCTGCACCATTGGGAATGCA +
Preference number: 5 (lower is better)
Translates to: VIIDEGERVGFGIQP*HSMLGRVSCTIGNA
Trigger: TGCATTCCCAATGGTGCAGGAGACACGCCCGAGCATCGAATGTCACGGCTGAATCCCGAAGCCCACCCTCTCTCCTTCATCAATGATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp AGCTACGCCCAGTGGTTGAGGGGTCATGGCAAGAGCACTGTCCCGTaGCACTATTACAGATGTGGCTCACAGCACCAGCTGTGTGGCATA +
Preference number: 5 (lower is better)
Translates to: SYAQWLRGHGKSTVP*HYYRCGSQHQLCGI
Trigger: TATGCCACACAGCTGGTGCTGTGAGCCACATCTGTAATAGTGTCACGGGACAGTGCTCTTGCCATGACCCCTCAACCACTGGGCGTAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GCCTTCTGGATTTCCTGGGAGTGTCCACACAGTCTCAGACGATGGTaGCTTAGAGCACCCTTGGGAGGTGCAGGCTTCTACCTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: AFWISWECPHSLRRW*LRAPLGGAGFYLEV
Trigger: CACTTCCAGGTAGAAGCCTGCACCTCCCAAGGGTGCTCTAAGTCACCATCGTCTGAGACTGTGTGGACACTCCCAGGAAATCCAGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp AGTGCCACTCCAGTCCACCCACACCATGGATGCGTTGCTGTCCACTaGGAACAGGGCTTGGTACTGAGGCATCTCCTTCTTGGTGCTGAA +
Preference number: 5 (lower is better)
Translates to: SATPVHPHHGCVAVH*EQGLVLRHLLLGAE
Trigger: TTCAGCACCAAGAAGGAGATGCCTCAGTACCAAGCCCTGTTCTCAGTGGACAGCAACGCATCCATGGTGTGGGTGGACTGGAGTGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GGCAGACGACACCCTGCCAGCCATATTCACAGCCAAGACCCTAAATaGATACTCTGTGTGTGGCTCCAAGCCAGAGATGAACGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: GRRHPASHIHSQDPK*ILCVWLQARDERAG
Trigger: GCCAGCACGTTCATCTCTGGCTTGGAGCCACACACAGAGTATGCATTTAGGGTCTTGGCTGTGAATATGGCTGGCAGGGTGTCGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CGTTCCCGTCACCGTGAAAGCATGCACGGTAGAACTGCCGGGTGCTaGCGCATCTGGTCTTTCTTGGTAGATCACATGGTACTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: RSRHRESMHGRTAGC*RIWSFLVDHMVLGD
Trigger: ATCTCCCAGTACCATGTGATCTACCAAGAAAGACCAGATGCGGCAGCACCCGGCAGTTCTACCGTGCATGCTTTCACGGTGACGGGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp ACTCGTTCCCGTCACCGTGAAAGCATGCACGGTAGAACTGCCGGGTaGTGCCGCATCTGGTCTTTCTTGGTAGATCACATGGTACTGGGA +
Preference number: 5 (lower is better)
Translates to: TRSRHRESMHGRTAG*CRIWSFLVDHMVLG
Trigger: TCCCAGTACCATGTGATCTACCAAGAAAGACCAGATGCGGCAGCACCCGGCAGTTCTACCGTGCATGCTTTCACGGTGACGGGAACGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp TTCCCTTGCGTGTTGTATTCTGTGAAAACAGTGTTCCCGTCTGCCTaGCATGTTGTGTTCCCCCAGTCCTCTTCCTCCGAGCGTCTGCGG +
Preference number: 5 (lower is better)
Translates to: FPCVLYSVKTVFPSA*HVVFPQSSSSERLR
Trigger: CCGCAGACGCTCGGAGGAAGAGGACTGGGGGAACACAACATGGCAGGCAGACGGGAACACTGTTTTCACAGAATACAACACGCAAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp ACCTTCCGGTGGGGCAGGTCCAGTTCTGCACCGTGTCCAGTTACTTaGAGCTTTGCCTGCAGAATTCACCGCCCATACCTGGTATTCGTA +
Preference number: 5 (lower is better)
Translates to: TFRWGRSSSAPCPVT*SFACRIHRPYLVFV
Trigger: TACGAATACCAGGTATGGGCGGTGAATTCTGCAGGCAAAGCTGCAAGTAACTGGACACGGTGCAGAACTGGACCTGCCCCACCGGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp ACGACAAAAAGTGCTAGGGCCTGGGAATCCACACGTGGCGTGGGTTaGCACAGTGGATACCTTCCTGAAAGCACCCACATTCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: TTKSARAWESTRGVG*HSGYLPESTHILQP
Trigger: AGGCTGGAGAATGTGGGTGCTTTCAGGAAGGTATCCACTGTGCCAACCCACGCCACGTGTGGATTCCCAGGCCCTAGCACTTTTTGTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp AAATACTGCCAGTCCTCCCAGGGAGAGCTGTCTGCCTTCTTCCTCTaGATCCGAATTGCCACAGGCTGTAGGCTGGAGAACTGGGTGATG +
Preference number: 5 (lower is better)
Translates to: KYCQSSQGELSAFFL*IRIATGCRLENWVM
Trigger: CATCACCCAGTTCTCCAGCCTACAGCCTGTGGCAATTCGGATCCAGAGGAAGAAGGCAGACAGCTCTCCCTGGGAGGACTGGCAGTATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GCCAGCCATATTCACAGCCAAGACCCTAAATGCATACTCTGTGTGTaGCTCCAAGCCAGAGATGAACGTGCTGGCTTGGGGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: ASHIHSQDPKCILCV*LQARDERAGLGLLE
Trigger: CTCCAGCAGCCCCAAGCCAGCACGTTCATCTCTGGCTTGGAGCCACACACAGAGTATGCATTTAGGGTCTTGGCTGTGAATATGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp AGTCCTAGAATCCAGGACAGTCAAACCCGGGGGATCCACTTGCTCTaGCGGCAGCTGTGCTGTGTGCAAGATGACTTGGGAGCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: SPRIQDSQTRGIHLL*RQLCCVQDDLGAVC
Trigger: ACAAACAGCTCCCAAGTCATCTTGCACACAGCACAGCTGCCGCCAGAGCAAGTGGATCCCCCGGGTTTGACTGTCCTGGATTCTAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACCCGGGGGATCCACTaGCTCTGGCGGCAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTRGIH*LWRQLC
Trigger: GCACAGCTGCCGCCAGAGCAAGTGGATCCCCCGGGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp CACAGTCGCACGCCTGACAACCTTGAGGATTGTCCATCGTCAAATTaGACCTGTGAGGCTTGCACTGGTGGCAACGCAGACCAGTTACCC +
Preference number: 5 (lower is better)
Translates to: HSRTPDNLEDCPSSN*TCEACTGGNADQLP
Trigger: GGGTAACTGGTCTGCGTTGCCACCAGTGCAAGCCTCACAGGTTCAATTTGACGATGGACAATCCTCAAGGTTGTCAGGCGTGCGACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GCAACTGACAGCACAACCAGCAGCTGTGCAAGCCTTCAGCTGGTATaGGTATTCCTGGAGTGGCTGAATTCCCTGCGTGTCCGTGAAGCT +
Preference number: 5 (lower is better)
Translates to: ATDSTTSSCASLQLV*VFLEWLNSLRVREA
Trigger: AGCTTCACGGACACGCAGGGAATTCAGCCACTCCAGGAATACTCATACCAGCTGAAGGCTTGCACAGCTGCTGGTTGTGCTGTCAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GCAGTGCACCCTCCACTTGTGCAGGCCACAAGGGAGATATTATACTaGGTGGAAGGCTGCAGGTTAGAGAGCAGAAAGGACAGACCCTGC +
Preference number: 5 (lower is better)
Translates to: AVHPPLVQATREILY*VEGCRLESRKDRPC
Trigger: GCAGGGTCTGTCCTTTCTGCTCTCTAACCTGCAGCCTTCCACTCAGTATAATATCTCCCTTGTGGCCTGCACAAGTGGAGGGTGCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GCGCCTGCAGGTCATAGAATCCATCCTGGCACTGAAGGCACTGTCTaGCAGACACACGTCTCTTACAATCACATTGGCCTCCAATCGGGT +
Preference number: 5 (lower is better)
Translates to: APAGHRIHPGTEGTV*QTHVSYNHIGLQSG
Trigger: ACCCGATTGGAGGCCAATGTGATTGTAAGAGACGTGTGTCTGGCAGACAGTGCCTTCAGTGCCAGGATGGATTCTATGACCTGCAGGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CACTGGTGGCAACGCAGACCAGTTACCCCTAGTTTGCAAGGACACTaGCCGGTTGACTTGTCACACCTTAGAGAGCCATTTACCGTTCCC +
Preference number: 5 (lower is better)
Translates to: HWWQRRPVTPSLQGH*PVDLSHLREPFTVP
Trigger: GGGAACGGTAAATGGCTCTCTAAGGTGTGACAAGTCAACCGGGCAGTGTCCTTGCAAACTAGGGGTAACTGGTCTGCGTTGCCACCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp ACGGCTGGACACAGATGCCAAGTTAACGACAACACCCCGTGCAAATaGAACTTCCTTCACGCAACCACGGAACCCTGGCTCCAGAGTCAA +
Preference number: 5 (lower is better)
Translates to: TAGHRCQVNDNTPCK*NFLHATTEPWLQSQ
Trigger: TTGACTCTGGAGCCAGGGTTCCGTGGTTGCGTGAAGGAAGTTGCATTTGCACGGGGTGTTGTCGTTAACTTGGCATCTGTGTCCAGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GAGTCCGGTTTCCTACCAGTGGGCCCAGAGCACAACCCTTTGCCGTaGATGCTTGAACTTGGAAGGTGTGTAAGCTCCCAGGATCAAATC +
Preference number: 5 (lower is better)
Translates to: ESGFLPVGPEHNPLP*MLELGRCVSSQDQI
Trigger: GATTTGATCCTGGGAGCTTACACACCTTCCAAGTTCAAGCATGCACGGCAAAGGGTTGTGCTCTGGGCCCACTGGTAGGAAACCGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CGTGCAGATATGGGTGGTGGCGTTGAAGTCACACCTCCCACAGTGTaGTGTGGCTTTCATGGTTGCTGGGCAGATAGTCGCACATACTCT +
Preference number: 5 (lower is better)
Translates to: RADMGGGVEVTPPTV*CGFHGCWADSRTYS
Trigger: AGAGTATGTGCGACTATCTGCCCAGCAACCATGAAAGCCACAGCACACTGTGGGAGGTGTGACTTCAACGCCACCACCCATATCTGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp ACTGGCTCTGACCACTGCAGCAGCAAAGCCCGGCCCTTTTCTCTCTaGTCCACTGTGAAGTTCATCAGTCCGCTTGGGGCAGATTCTAAA +
Preference number: 5 (lower is better)
Translates to: TGSDHCSSKARPFSL*STVKFISPLGADSK
Trigger: TTTAGAATCTGCCCCAAGCGGACTGATGAACTTCACAGTGGAGCAGAGAGAAAAGGGCCGGGCTTTGCTGCTGCAGTGGTCAGAGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp TCAGGAGAAAAGTGCCACTCCAGTCCACCCACACCATGGATGCGTTaGTGTCCACTGAGAACAGGGCTTGGTACTGAGGCATCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: SGEKCHSSPPTPWMR*CPLRTGLGTEASPS
Trigger: AGAAGGAGATGCCTCAGTACCAAGCCCTGTTCTCAGTGGACAGCAACGCATCCATGGTGTGGGTGGACTGGAGTGGCACTTTTCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GCATACTCTGTGTGTGGCTCCAAGCCAGAGATGAACGTGCTGGCTTaGGGCTGCTGGAGCAGGTTCTTACTCGGATTGACCGACTGTAAA +
Preference number: 5 (lower is better)
Translates to: AYSVCGSKPEMNVLA*GCWSRFLLGLTDCK
Trigger: TTTACAGTCGGTCAATCCGAGTAAGAACCTGCTCCAGCAGCCCCAAGCCAGCACGTTCATCTCTGGCTTGGAGCCACACACAGAGTATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp ACAGCAGCTGTGGCAGCTGGGAGGGAAGACTTCTTCCTTTCTAGATaGTACAAAGGAGGTGGTCCATTGACTCCTGCAGGAGGAAGCCAC +
Preference number: 5 (lower is better)
Translates to: TAAVAAGREDFFLSR*YKGGGPLTPAGGSH
Trigger: GTGGCTTCCTCCTGCAGGAGTCAATGGACCACCTCCTTTGTACCATCTAGAAAGGAAGAAGTCTTCCCTCCCAGCTGCCACAGCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TTAACGATGCAGAAGGAATGGGGAATAATTCTAGACGGCCATGAGTaGAGGGACCAGGCCTCATCTGGAGCTGGTATCTGGGAGAGCCCG +
Preference number: 5 (lower is better)
Translates to: LTMQKEWGIILDGHE*RDQASSGAGIWESP
Trigger: CGGGCTCTCCCAGATACCAGCTCCAGATGAGGCCTGGTCCCTCCACTCATGGCCGTCTAGAATTATTCCCCATTCCTTCTGCATCGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp ATTTTCTCGGGGACACTCCAGCTGAGGTGTAGAGTCTCTGAGCTCTaGGCTGTGATGTTTGGTGGTGGGACATTCTCCGGGCTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: IFSGTLQLRCRVSEL*AVMFGGGTFSGLLW
Trigger: CCAAAGAAGCCCGGAGAATGTCCCACCACCAAACATCACAGCCCAGAGCTCAGAGACTCTACACCTCAGCTGGAGTGTCCCCGAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp AGCGTTCTGACGTATGTCCCAGGGCTGACTCCACAGCCCCCATTTTaGCAGGCTTGGATCCGTATTTCATACTGTGTGAACGGAGACAGG +
Preference number: 5 (lower is better)
Translates to: SVLTYVPGLTPQPPF*QAWIRISYCVNGDR
Trigger: CCTGTCTCCGTTCACACAGTATGAAATACGGATCCAAGCCTGCCAAAATGGGGGCTGTGGAGTCAGCCCTGGGACATACGTCAGAACGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CACCGTGAAAGCATGCACGGTAGAACTGCCGGGTGCTGCCGCATCTaGTCTTTCTTGGTAGATCACATGGTACTGGGAGATGAGGCCATT +
Preference number: 5 (lower is better)
Translates to: HRESMHGRTAGCCRI*SFLVDHMVLGDEAI
Trigger: AATGGCCTCATCTCCCAGTACCATGTGATCTACCAAGAAAGACCAGATGCGGCAGCACCCGGCAGTTCTACCGTGCATGCTTTCACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GTGGAGAGAGCTCTGGGAGTAGGCGTGGCTCAGTTGGCTTTGACTTaGGATCCGCAGTACAGACACACTTTGGCTGCTCCGAATACTCAT +
Preference number: 5 (lower is better)
Translates to: VERALGVGVAQLALT*DPQYRHTLAAPNTH
Trigger: ATGAGTATTCGGAGCAGCCAAAGTGTGTCTGTACTGCGGATCCCAAGTCAAAGCCAACTGAGCCACGCCTACTCCCAGAGCTCTCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS GCA 90 bp GAAACACTGGCCTGTGACTGCATCACAAGTTCCATTCGAGGCTCCTaGTACATGACAGTGACAAGGCCTGCATCTTCCAGTCAGGGGATC +
Preference number: 5 (lower is better)
Translates to: ETLACDCITSSIRGS*YMTVTRPASSSQGI
Trigger: GATCCCCTGACTGGAAGATGCAGGCCTTGTCACTGTCATGTAGCAGGAGCCTCGAATGGAACTTGTGATGCAGTCACAGGCCAGTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CACCAGCAGAGGCTGGCCTCCAGCCTGGGAGGTGCTCTTCTTAAGTaGATTCACACGGACAGATACCACAGAGCCTTCCTTTTTGATACT +
Preference number: 5 (lower is better)
Translates to: HQQRLASSLGGALLK*IHTDRYHRAFLFDT
Trigger: AGTATCAAAAAGGAAGGCTCTGTGGTATCTGTCCGTGTGAATGCACTTAAGAAGAGCACCTCCCAGGCTGGAGGCCAGCCTCTGCTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GGCGTTGAAGTCACACCTCCCACAGTGTGCTGTGGCTTTCATGGTTaGTGGGCAGATAGTCGCACATACTCTGGTTTCCTTCATCGCCAT +
Preference number: 5 (lower is better)
Translates to: GVEVTPPTVCCGFHG*WADSRTYSGFLHRH
Trigger: ATGGCGATGAAGGAAACCAGAGTATGTGCGACTATCTGCCCAGCAACCATGAAAGCCACAGCACACTGTGGGAGGTGTGACTTCAACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CTGGGGTCCACAGAGGCATCTGGACAAGGTAGTCCTCACTCCAACTaGTACCACCTCCAGTTCTCGCTTCCAACTTGTAAATGTACCTGC +
Preference number: 5 (lower is better)
Translates to: LGSTEASGQGSPHSN*YHLQFSLPTCKCTC
Trigger: GCAGGTACATTTACAAGTTGGAAGCGAGAACTGGAGGTGGTAGCAGTTGGAGTGAGGACTACCTTGTCCAGATGCCTCTGTGGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp TTGTATGCCTTGATCACTCCATTGGTCTTCACTGGCTCTGACCACTaGAGCAGCAAAGCCCGGCCCTTTTCTCTCTGCTCCACTGTGAAG +
Preference number: 5 (lower is better)
Translates to: LYALITPLVFTGSDH*SSKARPFSLCSTVK
Trigger: CTTCACAGTGGAGCAGAGAGAAAAGGGCCGGGCTTTGCTGCTGCAGTGGTCAGAGCCAGTGAAGACCAATGGAGTGATCAAGGCATACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GCTTCCTTCTTGCATGCACACTGCCCAGAAAGCGGATCACAGAGTTaGTTCACTGAGCCGTGGAGGTTACATTGGCAAGGCTCACATCCA +
Preference number: 5 (lower is better)
Translates to: ASFLHAHCPESGSQS*FTEPWRLHWQGSHP
Trigger: TGGATGTGAGCCTTGCCAATGTAACCTCCACGGCTCAGTGAACCAACTCTGTGATCCGCTTTCTGGGCAGTGTGCATGCAAGAAGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp ACGGCTGGAGACCAGTCACTTCGTAGCTTAACGATGCAGAAGGAATaGGGAATAATTCTAGACGGCCATGAGTGGAGGGACCAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: TAGDQSLRSLTMQKE*GIILDGHEWRDQAS
Trigger: TGAGGCCTGGTCCCTCCACTCATGGCCGTCTAGAATTATTCCCCATTCCTTCTGCATCGTTAAGCTACGAAGTGACTGGTCTCCAGCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CACAGAATCAAACACATGGGTTTCCCCTGGTGGGTAGACGCTCAGTaGGGTCATTCGTTTCTGAAGAGGTACCAAGGGAGGTCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: HRIKHMGFPWWVDAQ*GHSFLKRYQGRSLS
Trigger: AGAGAGCGACCTCCCTTGGTACCTCTTCAGAAACGAATGACCCCACTGAGCGTCTACCCACCAGGGGAAACCCATGTGTTTGATTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000127077.2
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGCTGGGACCCAGCCTaGCTGCAGTCACAGACCTCA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGWDPA*LQSQTS
Trigger: TGAGGTCTGTGACTGCAGCAAGGCTGGGTCCCAGCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGGTGGCCCCTGCGTTaGAGGAGGTGCTTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRWPLR*RRCLGC
Trigger: ACAGCCCAAGCACCTCCTCAAACGCAGGGGCCACCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGGCTCTTGAGGGAGTaGGCACACTCTGCGGAGCTG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGLLRE*AHSAEL
Trigger: CAGCTCCGCAGAGTGTGCCAACTCCCTCAAGAGCCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGAGCCCGGAGCGTTGTaGCGAGCTGGTGTAGACCAG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVEPGAL*RAGVDQ
Trigger: CTGGTCTACACCAGCTCGCAACAACGCTCCGGGCTC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGGAGAGCCCGGAGCGTaGTTGCGAGCTGGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVGEPGA*LRAGVD
Trigger: GTCTACACCAGCTCGCAACAACGCTCCGGGCTCTCC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGGGAGATGAGGCCATaGGGGGCCTCTGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVWEMRP*GASGSV
Trigger: GACAGAGCCAGAGGCCCCCAATGGCCTCATCTCCCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCCTTTCTGTGTGGCTaGGAGGGCAGCGTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSFLCG*EGSVGL
Trigger: CAGCCCCACGCTGCCCTCCAAGCCACACAGAAAGGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp CTTCCTGAAAGCACCCACATTCTCCAGCCTTGGGAAAACGCCCTGTaGGGCAGCCAACACCAATACCGAAGCCAAATAGGCAAGGATCAA +
Preference number: 5 (lower is better)
Translates to: LPESTHILQPWENAL*GSQHQYRSQIGKDQ
Trigger: TTGATCCTTGCCTATTTGGCTTCGGTATTGGTGTTGGCTGCCTCACAGGGCGTTTTCCCAAGGCTGGAGAATGTGGGTGCTTTCAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp CTTGCATGCACACTGCCCAGAAAGCGGATCACAGAGTTGGTTCACTaGGCCGTGGAGGTTACATTGGCAAGGCTCACATCCATCACCATT +
Preference number: 5 (lower is better)
Translates to: LACTLPRKRITELVH*AVEVTLARLTSITI
Trigger: AATGGTGATGGATGTGAGCCTTGCCAATGTAACCTCCACGGCTCAGTGAACCAACTCTGTGATCCGCTTTCTGGGCAGTGTGCATGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp CACACCTTCTTCCTTGTCGATGAGGTAGACATAGACACTGGCCACTaGTGGGGTCACACATGCTTCCAGGTAATGTCCCCAACGAGTCAC +
Preference number: 5 (lower is better)
Translates to: HTFFLVDEVDIDTGH*WGHTCFQVMSPTSH
Trigger: GTGACTCGTTGGGGACATTACCTGGAAGCATGTGTGACCCCATCAGTGGCCAGTGTCTATGTCTACCTCATCGACAAGGAAGAAGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp AGGCCGCAGAGTGCCTGTATCATCAGTAAACTCCAGAGCTCCTTCTaGCCAGACAAAGAGCAGAGACTCTTCTTCAGTGTCAGCAGGACG +
Preference number: 5 (lower is better)
Translates to: RPQSACIISKLQSSF*PDKEQRLFFSVSRT
Trigger: CGTCCTGCTGACACTGAAGAAGAGTCTCTGCTCTTTGTCTGGTCAGAAGGAGCTCTGGAGTTTACTGATGATACAGGCACTCTGCGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CAAGAGTCACACTTAAGTCCTTTGGCTTCCTTCTTGCATGCACACTaGCCAGAAAGCGGATCACAGAGTTGGTTCACTGAGCCGTGGAGG +
Preference number: 5 (lower is better)
Translates to: QESHLSPLASFLHAH*PESGSQSWFTEPWR
Trigger: CCTCCACGGCTCAGTGAACCAACTCTGTGATCCGCTTTCTGGGCAGTGTGCATGCAAGAAGGAAGCCAAAGGACTTAAGTGTGACTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp TTCAGGCACCCTTGTCCGGAAGCTGGCCTTGATTCCTATAAAATCTaGGTGAGCTGTTCTGGGAAACCTGCAGTAACCGTGTCCCACGAA +
Preference number: 5 (lower is better)
Translates to: FRHPCPEAGLDSYKI*VSCSGKPAVTVSHE
Trigger: TTCGTGGGACACGGTTACTGCAGGTTTCCCAGAACAGCTCACGCAGATTTTATAGGAATCAAGGCCAGCTTCCGGACAAGGGTGCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp TCCAGGCTTGTCCTCTGTAGTCATGAGCGGAGTCCAAGCACTGTATaGAGTGCCAAAGCCATTGGTGGCAACCAACCGAAACTCATACAC +
Preference number: 5 (lower is better)
Translates to: SRLVLCSHERSPSTV*SAKAIGGNQPKLIH
Trigger: GTGTATGAGTTTCGGTTGGTTGCCACCAATGGCTTTGGCACTGCATACAGTGCTTGGACTCCGCTCATGACTACAGAGGACAAGCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp AATCCTGCCCACAACACAGCATTCCTGGGAGGTAACTGTATACCATaGCCTCTTCTCCTCCACCACAGCACTGGAAATCTTGGCTCACCA +
Preference number: 5 (lower is better)
Translates to: NPAHNTAFLGGNCIP*PLLLHHSTGNLGSP
Trigger: TGGTGAGCCAAGATTTCCAGTGCTGTGGTGGAGGAGAAGAGGGCATGGTATACAGTTACCTCCCAGGAATGCTGTGTTGTGGGCAGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CTCCACGGCTGCAGACCCGTGTCATTATACACCCATGCATTCCCTTaGGTGTTGTATTCTGTGAAAACAGTGTTCCCGTCTGCCTGCCAT +
Preference number: 5 (lower is better)
Translates to: LHGCRPVSLYTHAFP*VLYSVKTVFPSACH
Trigger: ATGGCAGGCAGACGGGAACACTGTTTTCACAGAATACAACACGCAAGGGAATGCATGGGTGTATAATGACACGGGTCTGCAGCCGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CATAGACACATAGGATATCTCTGGTGGAGAGAGGCCATCTGGGGGTaGTTGCAATGTTCTCACCACATTCCAAGAGCTACAGGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: HRHIGYLWWREAIWG*LQCSHHIPRATGVP
Trigger: GGGCACACCTGTAGCTCTTGGAATGTGGTGAGAACATTGCAAGCACCCCCAGATGGCCTCTCTCCACCAGAGATATCCTATGTGTCTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GGAACTGAACTCCTTCTTCTAGGTTGGTGGGACAACCTTCCCAGCTaGGATGAACATTCACCTGCTCCTCAGAGCTCTGCCAATCCAAAG +
Preference number: 5 (lower is better)
Translates to: GTELLLLGWWDNLPS*DEHSPAPQSSANPK
Trigger: CTTTGGATTGGCAGAGCTCTGAGGAGCAGGTGAATGTTCATCCCAGCTGGGAAGGTTGTCCCACCAACCTAGAAGAAGGAGTTCAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CCAGAAATCCTGCTCCTAGGAACTGAACTCCTTCTTCTAGGTTGGTaGGACAACCTTCCCAGCTGGGATGAACATTCACCTGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: PEILLLGTELLLLGW*DNLPSWDEHSPAPQ
Trigger: CTGAGGAGCAGGTGAATGTTCATCCCAGCTGGGAAGGTTGTCCCACCAACCTAGAAGAAGGAGTTCAGTTCCTAGGAGCAGGATTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GCTCCAGAAATCCTGCTCCTAGGAACTGAACTCCTTCTTCTAGGTTaGTGGGACAACCTTCCCAGCTGGGATGAACATTCACCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: APEILLLGTELLLLG*WDNLPSWDEHSPAP
Trigger: AGGAGCAGGTGAATGTTCATCCCAGCTGGGAAGGTTGTCCCACCAACCTAGAAGAAGGAGTTCAGTTCCTAGGAGCAGGATTTCTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GCATCGCTGGCTCTCTGGACTCAGTTCAGTGCCGCAGCATTTCACTaGTGTGGGGTCATCCTTTCTAACATGTGCTTTAGACTCTCCACT +
Preference number: 5 (lower is better)
Translates to: ASLALWTQFSAAAFH*CGVILSNMCFRLST
Trigger: AGTGGAGAGTCTAAAGCACATGTTAGAAAGGATGACCCCACACCAGTGAAATGCTGCGGCACTGAACTGAGTCCAGAGAGCCAGCGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GTTGAAGTCACACCTCCCACAGTGTGCTGTGGCTTTCATGGTTGCTaGGCAGATAGTCGCACATACTCTGGTTTCCTTCATCGCCATTCC +
Preference number: 5 (lower is better)
Translates to: VEVTPPTVCCGFHGC*ADSRTYSGFLHRHS
Trigger: GGAATGGCGATGAAGGAAACCAGAGTATGTGCGACTATCTGCCCAGCAACCATGAAAGCCACAGCACACTGTGGGAGGTGTGACTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GGAAATCAGCAGTTGGAGGGGACTCATAGACACATAGGATATCTCTaGTGGAGAGAGGCCATCTGGGGGTGCTTGCAATGTTCTCACCAC +
Preference number: 5 (lower is better)
Translates to: GNQQLEGTHRHIGYL*WREAIWGCLQCSHH
Trigger: GTGGTGAGAACATTGCAAGCACCCCCAGATGGCCTCTCTCCACCAGAGATATCCTATGTGTCTATGAGTCCCCTCCAACTGCTGATTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TGTCAGCACCAGGCCAGATCCAGTAGCAGCATCATATTGGACCAGTaGAGTCTTAACACTTCCAATGTCGGTCGTGCAGGTGACCTGGAA +
Preference number: 5 (lower is better)
Translates to: CQHQARSSSSIILDQ*SLNTSNVGRAGDLE
Trigger: TTCCAGGTCACCTGCACGACCGACATTGGAAGTGTTAAGACTCCACTGGTCCAATATGATGCTGCTACTGGATCTGGCCTGGTGCTGACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCTCTCCGTACACAGTaGCACATGCTCAGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPLRTQ*HMLSRH
Trigger: GTGGCGGCTGAGCATGTGCAACTGTGTACGGAGAGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCTCCACCGCCTCTGTaGTGTTCCAGGGGAAATGGG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPPPPL*CSRGNG
Trigger: CCCATTTCCCCTGGAACACAACAGAGGCGGTGGAGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGCTACGCCCAGTGGTaGAGGGGTCATGGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSYAQW*RGHGKS
Trigger: GCTCTTGCCATGACCCCTCAACCACTGGGCGTAGCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGATGAACGTGCTGGCTaGGGGCTGCTGGAGCAGGTT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVDERAG*GLLEQV
Trigger: AACCTGCTCCAGCAGCCCCAAGCCAGCACGTTCATC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGAAGCGGGTTCCCTTaGTCACAGCAGCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRSGFP*SQQLWQ
Trigger: CTGCCACAGCTGCTGTGACAAAGGGAACCCGCTTCG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAACCTGAAGACTGGTaGGAGCGGCAGCTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQPEDW*ERQLQA
Trigger: GGCTTGCAGCTGCCGCTCCAACCAGTCTTCAGGTTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAGTGCACCCTCCACTaGTGCAGGCCACAAGGGAGA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQCTLH*CRPQGR
Trigger: TCTCCCTTGTGGCCTGCACAAGTGGAGGGTGCACTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGCGTCCCGCTGGAGTaGGAGAAGACCCTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCVPLE*EKTLKR
Trigger: CCTCTTCAGGGTCTTCTCCAACTCCAGCGGGACGCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GGGAATTGTAAAGAAAGTAAGGACGGCCATTCTTCAACTGCAGGGTaGAATACTCTTCCTGGTCGCCAGGGGACAGTGCCAGGAGGATCA +
Preference number: 5 (lower is better)
Translates to: GNCKESKDGHSSTAG*NTLPGRQGTVPGGS
Trigger: TGATCCTCCTGGCACTGTCCCCTGGCGACCAGGAAGAGTATTTCACCCTGCAGTTGAAGAATGGCCGTCCTTACTTTCTTTACAATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp CAGTGCCAAAGCCATTGGTGGCAACCAACCGAAACTCATACACTGTaGACGGCTGGAGACCAGTCACTTCGTAGCTTAACGATGCAGAAG +
Preference number: 5 (lower is better)
Translates to: QCQSHWWQPTETHTL*TAGDQSLRSLTMQK
Trigger: CTTCTGCATCGTTAAGCTACGAAGTGACTGGTCTCCAGCCGTTCACAGTGTATGAGTTTCGGTTGGTTGCCACCAATGGCTTTGGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp CCACGAGAAGCAAGCTTCCATTACGCCTCAGCTGATATTGAGAAATaGGGCCGTTGGGCCTTTCTGGAGGATTCCAATATAGCTCCACGG +
Preference number: 5 (lower is better)
Translates to: PREASFHYASADIEK*GRWAFLEDSNIAPR
Trigger: CCGTGGAGCTATATTGGAATCCTCCAGAAAGGCCCAACGGCCTCATTTCTCAATATCAGCTGAGGCGTAATGGAAGCTTGCTTCTCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp ATCTGCCCGTCCACTGTCTTTTCTATCACACACATAGTGCCTCCTTaGTCAAGCTTCAACCACACAGCTAAGGTCAATTCGGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: ICPSTVFSITHIVPP*SSFNHTAKVNSAAS
Trigger: GCTGGCAGCCGAATTGACCTTAGCTGTGTGGTTGAAGCTTGAGCAAGGAGGCACTATGTGTGTGATAGAAAAGACAGTGGACGGGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CAGCTGTGCTGTGTGCAAGATGACTTGGGAGCTGTTTGTGCACCCTaGTTGTGTGCATGCACCAACTATAATCTCGTAGGCTGCGAATAC +
Preference number: 5 (lower is better)
Translates to: QLCCVQDDLGAVCAP*LCACTNYNLVGCEY
Trigger: GTATTCGCAGCCTACGAGATTATAGTTGGTGCATGCACACAAGCAGGGTGCACAAACAGCTCCCAAGTCATCTTGCACACAGCACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp AGCATACTGCCTCCACGGCTGCAGACCCGTGTCATTATACACCCATaGATTCCCTTGCGTGTTGTATTCTGTGAAAACAGTGTTCCCGTC +
Preference number: 5 (lower is better)
Translates to: SILPPRLQTRVIIHP*IPLRVVFCENSVPV
Trigger: GACGGGAACACTGTTTTCACAGAATACAACACGCAAGGGAATGCATGGGTGTATAATGACACGGGTCTGCAGCCGTGGAGGCAGTATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GCACACTGCCCAGAAAGCGGATCACAGAGTTGGTTCACTGAGCCGTaGAGGTTACATTGGCAAGGCTCACATCCATCACCATTAAAACTC +
Preference number: 5 (lower is better)
Translates to: AHCPESGSQSWFTEP*RLHWQGSHPSPLKL
Trigger: GAGTTTTAATGGTGATGGATGTGAGCCTTGCCAATGTAACCTCCACGGCTCAGTGAACCAACTCTGTGATCCGCTTTCTGGGCAGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CCTGAACAGAGTGTATGTAAGCCAGTGAGCATTTGGGCACTCGGGTaGACTCCAGGACACATTGATGGTAGAAGAACTCTGAACCCATCC +
Preference number: 5 (lower is better)
Translates to: PEQSVCKPVSIWALG*TPGHIDGRRTLNPS
Trigger: GGATGGGTTCAGAGTTCTTCTACCATCAATGTGTCCTGGAGTCCACCCGAGTGCCCAAATGCTCACTGGCTTACATACACTCTGTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp AGGCTGAGGGTCATACAGAAGTCCGTCACAACATACCTTAGTTCCTaGAGAGTAGCACGTGTGCCCACAGACTTTTCCAGGGTATTGGCA +
Preference number: 5 (lower is better)
Translates to: RLRVIQKSVTTYLSS*RVARVPTDFSRVLA
Trigger: TGCCAATACCCTGGAAAAGTCTGTGGGCACACGTGCTACTCTCCAGGAACTAAGGTATGTTGTGACGGACTTCTGTATGACCCTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TTTCAAAGGATTATATCCAACCCCATCACAGCATCGCTGGCTCTCTaGACTCAGTTCAGTGCCGCAGCATTTCACTGGTGTGGGGTCATC +
Preference number: 5 (lower is better)
Translates to: FQRIISNPITASLAL*TQFSAAAFHWCGVI
Trigger: GATGACCCCACACCAGTGAAATGCTGCGGCACTGAACTGAGTCCAGAGAGCCAGCGATGCTGTGATGGGGTTGGATATAATCCTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TCCTGCACTGTTTACAGCCACCACACCAATGTGGTATGTTGTGAATaGTTCCAAGCCAAAGAGATGGGCTTGACGACTCGTTCCCGTCAC +
Preference number: 5 (lower is better)
Translates to: SCTVYSHHTNVVCCE*FQAKEMGLTTRSRH
Trigger: GTGACGGGAACGAGTCGTCAAGCCCATCTCTTTGGCTTGGAACCATTCACAACATACCACATTGGTGTGGTGGCTGTAAACAGTGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GGGACTCATAGACACATAGGATATCTCTGGTGGAGAGAGGCCATCTaGGGGTGCTTGCAATGTTCTCACCACATTCCAAGAGCTACAGGT +
Preference number: 5 (lower is better)
Translates to: GTHRHIGYLWWREAI*GCLQCSHHIPRATG
Trigger: ACCTGTAGCTCTTGGAATGTGGTGAGAACATTGCAAGCACCCCCAGATGGCCTCTCTCCACCAGAGATATCCTATGTGTCTATGAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCACATTCTCCAGCCTaGGGAAAACGCCCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPHSPA*GKRPVR
Trigger: CCTCACAGGGCGTTTTCCCAAGGCTGGAGAATGTGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTCCTGGGGCGCTTCTaGTGGAGTGGAGATGCTCAA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLLGRF*WSGDAQ
Trigger: TTGAGCATCTCCACTCCACAAGAAGCGCCCCAGGAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCCAAGCACTGCTGTTaGTGCCCCCATCAAGAGTGC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPKHCC*CPHQEC
Trigger: GCACTCTTGATGGGGGCACAAACAGCAGTGCTTGGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTAGGCGTGGCTCAGTaGGCTTTGACTTGGGATCCG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVGVAQ*ALTWDP
Trigger: CGGATCCCAAGTCAAAGCCAACTGAGCCACGCCTAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp ATTGCATCTAAGCCCAATAACATTCGCTTTGCACGAGCACTGGCCTaGATTTTGGTGACAGGTAATGTCTCCATCCACGGTCCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: IASKPNNIRFARALA*ILVTGNVSIHGPRG
Trigger: CCCTCTGGGACCGTGGATGGAGACATTACCTGTCACCAAAATTCAGGCCAGTGCTCGTGCAAAGCGAATGTTATTGGGCTTAGATGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp AACCAAGAGATCCAGGTGTGCCGAGGGTTGCCAAGTTACTATGATTaGTGTTGGAGTGTATGGGAACAACTGTGGGCTTGGGATGCCTTC +
Preference number: 5 (lower is better)
Translates to: NQEIQVCRGLPSYYD*CWSVWEQLWAWDAF
Trigger: GAAGGCATCCCAAGCCCACAGTTGTTCCCATACACTCCAACATCAATCATAGTAACTTGGCAACCCTCGGCACACCTGGATCTCTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp TCTCAACCAAGAGATCCAGGTGTGCCGAGGGTTGCCAAGTTACTATaGTTGATGTTGGAGTGTATGGGAACAACTGTGGGCTTGGGATGC +
Preference number: 5 (lower is better)
Translates to: SQPRDPGVPRVAKLL*LMLECMGTTVGLGC
Trigger: GCATCCCAAGCCCACAGTTGTTCCCATACACTCCAACATCAATCATAGTAACTTGGCAACCCTCGGCACACCTGGATCTCTTGGTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp CCGTGTCATTATACACCCATGCATTCCCTTGCGTGTTGTATTCTGTaGAAACAGTGTTCCCGTCTGCCTGCCATGTTGTGTTCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: PCHYTPMHSLACCIL*KQCSRLPAMLCSPS
Trigger: ACTGGGGGAACACAACATGGCAGGCAGACGGGAACACTGTTTTCACAGAATACAACACGCAAGGGAATGCATGGGTGTATAATGACACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GTCCACATACAGTCCACTGCTGTGGCCCATAATAGTTTCCCACAGTaGGTCTTCCGTAACAACCTTCTTGTCTGCCATGTCCATGAGCTG +
Preference number: 5 (lower is better)
Translates to: VHIQSTAVAHNSFPQ*VFRNNLLVCHVHEL
Trigger: CAGCTCATGGACATGGCAGACAAGAAGGTTGTTACGGAAGACTCACTGTGGGAAACTATTATGGGCCACAGCAGTGGACTGTATGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS GCA 90 bp TCATTGTCCTTCATTCCCCAAACACTGCAATTTCTGGCAAAATACTaGCAGTCCTCCCAGGGAGAGCTGTCTGCCTTCTTCCTCTGGATC +
Preference number: 5 (lower is better)
Translates to: SLSFIPQTLQFLAKY*QSSQGELSAFFLWI
Trigger: GATCCAGAGGAAGAAGGCAGACAGCTCTCCCTGGGAGGACTGGCAGTATTTTGCCAGAAATTGCAGTGTTTGGGGAATGAAGGACAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp ATGGCCGTGGCATTGGCATCTTCCACTGACAATGATCTCATCCACTaGATAGTATTGGTGTCTCCAGTCAACAGTGTGTCCAGCCGGATA +
Preference number: 5 (lower is better)
Translates to: MAVALASSTDNDLIH*IVLVSPVNSVSSRI
Trigger: TATCCGGCTGGACACACTGTTGACTGGAGACACCAATACTATGCAGTGGATGAGATCATTGTCAGTGGAAGATGCCAATGCCACGGCCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GGGACTGATTTTCCATACTGTAGGTGGCCCCTGCGTTTGAGGAGGTaGTTGGGCTGTGGTTACTATAATAGGCAAGCTGTAGAAACAGCT +
Preference number: 5 (lower is better)
Translates to: GTDFPYCRWPLRLRR*LGCGYYNRQAVETA
Trigger: AGCTGTTTCTACAGCTTGCCTATTATAGTAACCACAGCCCAAGCACCTCCTCAAACGCAGGGGCCACCTACAGTATGGAAAATCAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp TGCTTGCAATGTTCTCACCACATTCCAAGAGCTACAGGTGTGCCCTaGAGAATTCCAAGCGCAGATTCTATAAGCATACTGCCTCCACGG +
Preference number: 5 (lower is better)
Translates to: CLQCSHHIPRATGVP*RIPSADSISILPPR
Trigger: CCGTGGAGGCAGTATGCTTATAGAATCTGCGCTTGGAATTCTGCAGGGCACACCTGTAGCTCTTGGAATGTGGTGAGAACATTGCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CTTGGAGGTGTCCATGTAATTTCTATTGATTCTGGGCCTGTGATGTaGAGTGTTGGTGGGTCCATGTTCTCTGGTGGAGCCTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: LGGVHVISIDSGPVM*SVGGSMFSGGASFV
Trigger: GACAAAGGAGGCTCCACCAGAGAACATGGACCCACCAACACTGCACATCACAGGCCCAGAATCAATAGAAATTACATGGACACCTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CTCAGAGCCATTCCTGAACAGAGTGTATGTAAGCCAGTGAGCATTTaGGCACTCGGGTGGACTCCAGGACACATTGATGGTAGAAGAACT +
Preference number: 5 (lower is better)
Translates to: LRAIPEQSVCKPVSI*ALGWTPGHIDGRRT
Trigger: AGTTCTTCTACCATCAATGTGTCCTGGAGTCCACCCGAGTGCCCAAATGCTCACTGGCTTACATACACTCTGTTCAGGAATGGCTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TGGCATTCGTATCTCATAGCTCAGTATATCTCCGTTCTGCATAAGTaGGGCTTTCCAAGAGACCTCGACTGTATCTGGTGCCAGCACACG +
Preference number: 5 (lower is better)
Translates to: WHSYLIAQYISVLHK*GFPRDLDCIWCQHT
Trigger: CGTGTGCTGGCACCAGATACAGTCGAGGTCTCTTGGAAAGCCCCACTTATGCAGAACGGAGATATACTGAGCTATGAGATACGAATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp AATCAGCAGTTGGAGGGGACTCATAGACACATAGGATATCTCTGGTaGAGAGAGGCCATCTGGGGGTGCTTGCAATGTTCTCACCACATT +
Preference number: 5 (lower is better)
Translates to: NQQLEGTHRHIGYLW*REAIWGCLQCSHHI
Trigger: AATGTGGTGAGAACATTGCAAGCACCCCCAGATGGCCTCTCTCCACCAGAGATATCCTATGTGTCTATGAGTCCCCTCCAACTGCTGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCCGTGGAGGTTACATaGGCAAGGCTCACATCCATC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVAVEVT*ARLTSI
Trigger: GATGGATGTGAGCCTTGCCAATGTAACCTCCACGGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCAGTTACCCCTAGTTaGCAAGGACACTGCCCGGTT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPVTPS*QGHCPV
Trigger: AACCGGGCAGTGTCCTTGCAAACTAGGGGTAACTGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAGAATGACAAGGAGTaGGGAAGGGCCACGGCGACT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKNDKE*GRATAT
Trigger: AGTCGCCGTGGCCCTTCCCAACTCCTTGTCATTCTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCAGTGCCAAAGCCATaGGTGGCAACCAACCGAAAC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVAVPKP*VATNRN
Trigger: GTTTCGGTTGGTTGCCACCAATGGCTTTGGCACTGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAGGCCGACAGGGTCTaGTGGTCACTTCTACCCAAG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKADRV*WSLLPK
Trigger: CTTGGGTAGAAGTGACCACAAGACCCTGTCGGCCTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATATGGGTGGTGGCGTaGAAGTCACACCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVIWVVA*KSHLPQ
Trigger: CTGTGGGAGGTGTGACTTCAACGCCACCACCCATAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTCTTCCCTGTGGGATaGAGAGGCCCTCTCATCACC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFFPVG*RGPLIT
Trigger: GGTGATGAGAGGGCCTCTCAATCCCACAGGGAAGAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTGGCAGCGACTACCTaGCAACTGACAGCACAACCA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVAATT*QLTAQP
Trigger: TGGTTGTGCTGTCAGTTGCAAGGTAGTCGCTGCCAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp AGCCCAATAACATTCGCTTTGCACGAGCACTGGCCTGAATTTTGGTaGCAGGTAATGTCTCCATCCACGGTCCCAGAGGGATTACAGTTA +
Preference number: 5 (lower is better)
Translates to: SPITFALHEHWPEFW*QVMSPSTVPEGLQL
Trigger: TAACTGTAATCCCTCTGGGACCGTGGATGGAGACATTACCTGTCACCAAAATTCAGGCCAGTGCTCGTGCAAAGCGAATGTTATTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp AGAAAAACAGTACTGGGTGAATGGAACCAGATTCCAGATGGTAGCTaGGGTTTCTGGACCTTCATAGGAGACACAGGGCTCAGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: RKTVLGEWNQIPDGS*GFWTFIGDTGLSAV
Trigger: GACAGCACTGAGCCCTGTGTCTCCTATGAAGGTCCAGAAACCTCAGCTACCATCTGGAATCTGGTTCCATTCACCCAGTACTGTTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp TTTCCCCCACAGTTAACAGTACTGTCACTTGATAGGCATCCATCCTaGTTGACTCTGACAGCACGGCTGGACACAGATGCCAAGTTAACG +
Preference number: 5 (lower is better)
Translates to: FPPQLTVLSLDRHPS*LTLTARLDTDAKLT
Trigger: CGTTAACTTGGCATCTGTGTCCAGCCGTGCTGTCAGAGTCAATCAGGATGGATGCCTATCAAGTGACAGTACTGTTAACTGTGGGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GTCCAAGGGCGGAGGGCAGGATCATTATCAATAAACTTCATGGCTTaGCTTCTTGCCAGGGTCACCAGGTTCCTAACTTCCTTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: VQGRRAGSLSINFMA*LLARVTRFLTSFFP
Trigger: AGGGAAAAAGGAAGTTAGGAACCTGGTGACCCTGGCAAGAAGTCAAGCCATGAAGTTTATTGATAATGATCCTGCCCTCCGCCCTTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GAGAGTAGCACGTGTGCCCACAGACTTTTCCAGGGTATTGGCACTTaGCTGCTTTGCAAAGCTCATCACGCGGTTTGTCTGTTAACTTCT +
Preference number: 5 (lower is better)
Translates to: ESSTCAHRLFQGIGT*LLCKAHHAVCLLTS
Trigger: AGAAGTTAACAGACAAACCGCGTGATGAGCTTTGCAAAGCAGTCAAGTGCCAATACCCTGGAAAAGTCTGTGGGCACACGTGCTACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GATCAGGCCATGTGGGTTTCTTGGAGGTGTCCATGTAATTTCTATTaGTTCTGGGCCTGTGATGTGCAGTGTTGGTGGGTCCATGTTCTC +
Preference number: 5 (lower is better)
Translates to: DQAMWVSWRCPCNFY*FWACDVQCWWVHVL
Trigger: GAGAACATGGACCCACCAACACTGCACATCACAGGCCCAGAATCAATAGAAATTACATGGACACCTCCAAGAAACCCACATGGCCTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GCAGCTGCTGGCATGGCCATGGCACTGGCAAGGCTTACAGTTGAATaGATTAACATTGTCACCACTGCGGAAAGGCTTGTCATTATAAAG +
Preference number: 5 (lower is better)
Translates to: AAAGMAMALARLTVE*INIVTTAERLVIIK
Trigger: CTTTATAATGACAAGCCTTTCCGCAGTGGTGACAATGTTAATGCATTCAACTGTAAGCCTTGCCAGTGCCATGGCCATGCCAGCAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp CTGGACCTTCATAGGAGACACAGGGCTCAGTGCTGTCCACAGGTGTaGATGATAAAACATATTTTGCCACAGGATCAGAGCTGTTGGAGA +
Preference number: 5 (lower is better)
Translates to: LDLHRRHRAQCCPQV*MIKHILPQDQSCWR
Trigger: TCTCCAACAGCTCTGATCCTGTGGCAAAATATGTTTTATCATGCACACCTGTGGACAGCACTGAGCCCTGTGTCTCCTATGAAGGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GCCATGCAGGTAGATGTTATAATGGGTAATGGCCCCATTGCACTTTaGAGGCTGCCTCCAGATGACCGACAACATCCTAGCTTTCACATT +
Preference number: 5 (lower is better)
Translates to: AMQVDVIMGNGPIAL*RLPPDDRQHPSFHI
Trigger: AATGTGAAAGCTAGGATGTTGTCGGTCATCTGGAGGCAGCCTGCAAAGTGCAATGGGGCCATTACCCATTATAACATCTACCTGCATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GCTAGCTCTCACGGATTGGCTGAATCCTCGCCCGTAGCTGTTCCATaGAGAAATTCTATATTCATACACAGTGCTTGGCTTGAGGTCTCT +
Preference number: 5 (lower is better)
Translates to: ASSHGLAESSPVAVP*RNSIFIHSAWLEVS
Trigger: AGAGACCTCAAGCCAAGCACTGTGTATGAATATAGAATTTCTGCATGGAACAGCTACGGGCGAGGATTCAGCCAATCCGTGAGAGCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GTACAATTCAAAGCATATGATTTTTCCATTTGGCTGAAGTGGTCCTaGCCACCACACGGCTACTATGGGCTGGAATCCCCCTGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: VQFKAYDFSIWLKWS*PPHGYYGLESPCSC
Trigger: ACAGCTACAGGGGGATTCCAGCCCATAGTAGCCGTGTGGTGGGCAGGACCACTTCAGCCAAATGGAAAAATCATATGCTTTGAATTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TCCTCCTCCCACATGGTCACATGCACAACTGTGCTGTTGATTGCGTaGACTCCATTGAAAACCAAGAGGAAAACCTGGTACTCCACGTTT +
Preference number: 5 (lower is better)
Translates to: SSSHMVTCTTVLLIA*TPLKTKRKTWYSTF
Trigger: AAACGTGGAGTACCAGGTTTTCCTCTTGGTTTTCAATGGAGTCCACGCAATCAACAGCACAGTTGTGCATGTGACCATGTGGGAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GATGCTGTACTCGACTGGAATTTTGGGAAGCAGGTTCCCTGGTGTTaGCCATGCTACAAATATGGAATCAGAGCCCAGCACAGTGACATT +
Preference number: 5 (lower is better)
Translates to: DAVLDWNFGKQVPWC*PCYKYGIRAQHSDI
Trigger: AATGTCACTGTGCTGGGCTCTGATTCCATATTTGTAGCATGGCCAACACCAGGGAACCTGCTTCCCAAAATTCCAGTCGAGTACAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGCATGGCCGTGGCATaGGCATCTTCCACTGACAAT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSMAVA*ASSTDN
Trigger: ATTGTCAGTGGAAGATGCCAATGCCACGGCCATGCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCCTCTGGGTGGAGGTaGCTGAGATGGAGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSSGWR*LRWSFA
Trigger: AGCAAAACTCCATCTCAGCAACCTCCACCCAGAGGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTATGCTCTGGGCTCTaGAGGGAGTTGGCACACTCT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLCSGL*RELAHS
Trigger: AGAGTGTGCCAACTCCCTCAAGAGCCCAGAGCATAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGTGTGCAAGATGACTaGGGAGCTGTTTGTGCACCC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVCVQDD*GAVCAP
Trigger: GGGTGCACAAACAGCTCCCAAGTCATCTTGCACACA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCAGAGCACAACCCTTaGCCGTGCATGCTTGAACTT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPEHNP*PCMLEL
Trigger: AAGTTCAAGCATGCACGGCAAAGGGTTGTGCTCTGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGACTTGCGTTCCATaGCTTTTCACGCAGGCGTCT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLTCVP*LFTQAS
Trigger: AGACGCCTGCGTGAAAAGCAATGGAACGCAAGTCAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACGCCTCAGCTGATATaGAGAAATGAGGCCGTTGGG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTPQLI*RNEAVG
Trigger: CCCAACGGCCTCATTTCTCAATATCAGCTGAGGCGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCCATCTGGGGGTGCTaGCAATGTTCTCACCACATT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVAIWGC*QCSHHI
Trigger: AATGTGGTGAGAACATTGCAAGCACCCCCAGATGGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCAGGAAATCAGCAGTaGGAGGGGACTCATAGACAC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPGNQQ*EGTHRH
Trigger: GTGTCTATGAGTCCCCTCCAACTGCTGATTTCCTGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGGCATAACTGTACGTaGAGAAGGGAAGCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVWHNCT*RREAAG
Trigger: GCCAGCTGCTTCCCTTCTCAACGTACAGTTATGCCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCAGGAGTGGTGATGTaGGTGGGTTCACTGGTACAG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSGVVM*VGSLVQ
Trigger: CTGTACCAGTGAACCCACCAACATCACCACTCCTGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCTTTTCTCCAGGAGTaGTCAGCACCAGGCCAGATC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSFLQE*SAPGQI
Trigger: GATCTGGCCTGGTGCTGACAACTCCTGGAGAAAAGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACGGAGCTGAAACCCTaGATGGCGTTCATGAGCTCT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTELKP*MAFMSS
Trigger: AGAGCTCATGAACGCCATCAAGGGTTTCAGCTCCGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GTGGAGGTTGCTGAGATGGAGTTTTGCTGCAGCCTAATAGATTGTTaGCGTCCAAGTGGCTTGCACCAGGAACACAAGTGTCACATTTTG +
Preference number: 5 (lower is better)
Translates to: VEVAEMEFCCSLIDC*RPSGLHQEHKCHIL
Trigger: CAAAATGTGACACTTGTGTTCCTGGTGCAAGCCACTTGGACGTCAACAATCTATTAGGCTGCAGCAAAACTCCATCTCAGCAACCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GTCCGAGCCCACAGGAATGATGTGAGTCAAGTTCAAGTGTCCTTCTaGGACCTCTGGCTTTGTCTCATAAATGACAGGTATGCTCCTTGT +
Preference number: 5 (lower is better)
Translates to: VRAHRNDVSQVQVSF*DLWLCLINDRYAPC
Trigger: ACAAGGAGCATACCTGTCATTTATGAGACAAAGCCAGAGGTCTCAGAAGGACACTTGAACTTGACTCACATCATTCCTGTGGGCTCGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GAGGAGCCTGTGTACTGTCCATCAAGAGTAATCTGGCCAAAAGCCTaGTGTCTGACTGCTATGATTTCATGCCACTCTCCATCCCTGTAT +
Preference number: 5 (lower is better)
Translates to: EEPVYCPSRVIWPKA*CLTAMISCHSPSLY
Trigger: ATACAGGGATGGAGAGTGGCATGAAATCATAGCAGTCAGACATCAGGCTTTTGGCCAGATTACTCTTGATGGACAGTACACAGGCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GCGGAGGGCAGGATCATTATCAATAAACTTCATGGCTTGACTTCTTaGCAGGGTCACCAGGTTCCTAACTTCCTTTTTCCCTTTGACTCG +
Preference number: 5 (lower is better)
Translates to: AEGRIIINKLHGLTS*QGHQVPNFLFPFDS
Trigger: CGAGTCAAAGGGAAAAAGGAAGTTAGGAACCTGGTGACCCTGGCAAGAAGTCAAGCCATGAAGTTTATTGATAATGATCCTGCCCTCCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TTCTTCCTCTGGATCCGAATTGCCACAGGCTGTAGGCTGGAGAACTaGGTGATGACTTTAAGCACCTGGTACTGTCCATTTTCTAAGTCT +
Preference number: 5 (lower is better)
Translates to: FFLWIRIATGCRLEN*VMTLSTWYCPFSKS
Trigger: AGACTTAGAAAATGGACAGTACCAGGTGCTTAAAGTCATCACCCAGTTCTCCAGCCTACAGCCTGTGGCAATTCGGATCCAGAGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CAAGTGTCACATTTTGAGCCAGTGACAAACTCTTTGCAGAAACACTaGCCTGTGACTGCATCACAAGTTCCATTCGAGGCTCCTGCTACA +
Preference number: 5 (lower is better)
Translates to: QVSHFEPVTNSLQKH*PVTASQVPFEAPAT
Trigger: TGTAGCAGGAGCCTCGAATGGAACTTGTGATGCAGTCACAGGCCAGTGTTTCTGCAAAGAGTTTGTCACTGGCTCAAAATGTGACACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CCATTCTATTCTGAGTTCTGTGGGACTGATTTTCCATACTGTAGGTaGCCCCTGCGTTTGAGGAGGTGCTTGGGCTGTGGTTACTATAAT +
Preference number: 5 (lower is better)
Translates to: PFYSEFCGTDFPYCR*PLRLRRCLGCGYYN
Trigger: ATTATAGTAACCACAGCCCAAGCACCTCCTCAAACGCAGGGGCCACCTACAGTATGGAAAATCAGTCCCACAGAACTCAGAATAGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CCTCCAGATGACCGACAACATCCTAGCTTTCACATTGATAAGAATTaGAGCATCTATAGGTCCAGGCTTGTCCTCTGTAGTCATGAGCGG +
Preference number: 5 (lower is better)
Translates to: PPDDRQHPSFHIDKN*SIYRSRLVLCSHER
Trigger: CCGCTCATGACTACAGAGGACAAGCCTGGACCTATAGATGCTCCAATTCTTATCAATGTGAAAGCTAGGATGTTGTCGGTCATCTGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TTGACTGCTTTGCAAAGCTCATCACGCGGTTTGTCTGTTAACTTCTaGGTTTCAGAGCATGGGCGCCATGTTTTCCGCAAAACGTCATAC +
Preference number: 5 (lower is better)
Translates to: LTALQSSSRGLSVNF*VSEHGRHVFRKTSY
Trigger: GTATGACGTTTTGCGGAAAACATGGCGCCCATGCTCTGAAACCCAGAAGTTAACAGACAAACCGCGTGATGAGCTTTGCAAAGCAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CAAACATATTTCAAAGGATTATATCCAACCCCATCACAGCATCGCTaGCTCTCTGGACTCAGTTCAGTGCCGCAGCATTTCACTGGTGTG +
Preference number: 5 (lower is better)
Translates to: QTYFKGLYPTPSQHR*LSGLSSVPQHFTGV
Trigger: CACACCAGTGAAATGCTGCGGCACTGAACTGAGTCCAGAGAGCCAGCGATGCTGTGATGGGGTTGGATATAATCCTTTGAAATATGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TCTTCTGTACAATTCAAAGCATATGATTTTTCCATTTGGCTGAAGTaGTCCTGCCCACCACACGGCTACTATGGGCTGGAATCCCCCTGT +
Preference number: 5 (lower is better)
Translates to: SSVQFKAYDFSIWLK*SCPPHGYYGLESPC
Trigger: ACAGGGGGATTCCAGCCCATAGTAGCCGTGTGGTGGGCAGGACCACTTCAGCCAAATGGAAAAATCATATGCTTTGAATTGTACAGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GTCCAGTTACTTGCAGCTTTGCCTGCAGAATTCACCGCCCATACCTaGTATTCGTATTCCGTGAATGGTAGTAGCTCTGAGTCCATAAAG +
Preference number: 5 (lower is better)
Translates to: VQLLAALPAEFTAHT*YSYSVNGSSSESIK
Trigger: CTTTATGGACTCAGAGCTACTACCATTCACGGAATACGAATACCAGGTATGGGCGGTGAATTCTGCAGGCAAAGCTGCAAGTAACTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCAATAACATTCGCTTaGCACGAGCACTGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPITFA*HEHWPE
Trigger: TTCAGGCCAGTGCTCGTGCAAAGCGAATGTTATTGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCCAGTGACAAACTCTTaGCAGAAACACTGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVPVTNS*QKHWPV
Trigger: CACAGGCCAGTGTTTCTGCAAAGAGTTTGTCACTGG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGGACTGTAGTACTGTaGACTCCTGTCACCATGGGA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVWTVVL*TPVTMG
Trigger: TCCCATGGTGACAGGAGTCAACAGTACTACAGTCCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGTACAGCTGTACTGTaGATGATGACAACCTCTGGG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRTAVL*MMTTSG
Trigger: CCCAGAGGTTGTCATCATCAACAGTACAGCTGTACG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTTCAGGTGTGCAGATaGCCGGTGTCTGACAGAGAA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFQVCR*PVSDRE
Trigger: TTCTCTGTCAGACACCGGCAATCTGCACACCTGAAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTGCTGGCATTGAAATaGAGAGCAGGAAGCACTCCA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVLALK*RAGSTP
Trigger: TGGAGTGCTTCCTGCTCTCAATTTCAATGCCAGCAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGAAGGTGCTGGCATaGAAATTGAGAGCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLKVLA*KLRAGS
Trigger: GCTTCCTGCTCTCAATTTCAATGCCAGCACCTTCAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp ACTTGTCTTCTGTACAATTCAAAGCATATGATTTTTCCATTTGGCTaGAGTGGTCCTGCCCACCACACGGCTACTATGGGCTGGAATCCC +
Preference number: 5 (lower is better)
Translates to: TCLLYNSKHMIFPFG*SGPAHHTATMGWNP
Trigger: GGGATTCCAGCCCATAGTAGCCGTGTGGTGGGCAGGACCACTTCAGCCAAATGGAAAAATCATATGCTTTGAATTGTACAGAAGACAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GTACTGTCCATCAAGAGTAATCTGGCCAAAAGCCTGATGTCTGACTaGTATGATTTCATGCCACTCTCCATCCCTGTATCCTTGACTAGG +
Preference number: 5 (lower is better)
Translates to: VLSIKSNLAKSLMSD*YDFMPLSIPVSLTR
Trigger: CCTAGTCAAGGATACAGGGATGGAGAGTGGCATGAAATCATAGCAGTCAGACATCAGGCTTTTGGCCAGATTACTCTTGATGGACAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp ACAGGTATTGAAATGTCACTTGGAGTATCTTCCGCTGTGCTGACTTaGGTTCCATTGCTTTTCACGCAGGCGTCTTTTGTACAGACTTCC +
Preference number: 5 (lower is better)
Translates to: TGIEMSLGVSSAVLT*VPLLFTQASFVQTS
Trigger: GGAAGTCTGTACAAAAGACGCCTGCGTGAAAAGCAATGGAACGCAAGTCAGCACAGCGGAAGATACTCCAAGTGACATTTCAATACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp GAAAGAGTGTGTGTTTACATCTCCAGAATGAACTATTTCCTCTGCTaGAGAACACAGTCCTTCCACCGCTTTCTTCCCTGTGGGATTGAG +
Preference number: 5 (lower is better)
Translates to: ERVCVYISRMNYFLC*RTQSFHRFLPCGIE
Trigger: CTCAATCCCACAGGGAAGAAAGCGGTGGAAGGACTGTGTTCTGCAGCAGAGGAAATAGTTCATTCTGGAGATGTAAACACACACTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TTTCCAAATCTTCATTGTCCTTCATTCCCCAAACACTGCAATTTCTaGCAAAATACTGCCAGTCCTCCCAGGGAGAGCTGTCTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: FPNLHCPSFPKHCNF*QNTASPPRESCLPS
Trigger: AGAAGGCAGACAGCTCTCCCTGGGAGGACTGGCAGTATTTTGCCAGAAATTGCAGTGTTTGGGGAATGAAGGACAATGAAGATTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp GAAAGCGGATCACAGAGTTGGTTCACTGAGCCGTGGAGGTTACATTaGCAAGGCTCACATCCATCACCATTAAAACTCTGGAGGAATTTA +
Preference number: 5 (lower is better)
Translates to: ESGSQSWFTEPWRLH*QGSHPSPLKLWRNL
Trigger: TAAATTCCTCCAGAGTTTTAATGGTGATGGATGTGAGCCTTGCCAATGTAACCTCCACGGCTCAGTGAACCAACTCTGTGATCCGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCTCTTACAATCACATaGGCCTCCAATCGGGTCACA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSLTIT*ASNRVT
Trigger: TGTGACCCGATTGGAGGCCAATGTGATTGTAAGAGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCAGCCTAATAGATTGTaGACGTCCAAGTGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVQPNRL*TSKWLA
Trigger: TGCAAGCCACTTGGACGTCAACAATCTATTAGGCTG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTGCAGCCTAATAGATaGTTGACGTCCAAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLQPNR*LTSKWL
Trigger: AAGCCACTTGGACGTCAACAATCTATTAGGCTGCAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGTTTGAGGAGGTGCTaGGGCTGTGGTTACTATAAT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRLRRC*GCGYYN
Trigger: ATTATAGTAACCACAGCCCAAGCACCTCCTCAAACG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATGATGAACACATCCTaGAGGCAGCCCACAAAACCT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVMMNTS*RQPTKP
Trigger: AGGTTTTGTGGGCTGCCTCAAGGATGTGTTCATCAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAGACGAGACTGGAATaGAACTTGAAGCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKTRLE*NLKLSS
Trigger: GCTGCTGAGCTTCAAGTTCAATTCCAGTCTCGTCTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTTGGTCCATTTGGTTaGGATGGTGGCTGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFGPFG*DGGCQE
Trigger: TTCTTGGCAGCCACCATCCAAACCAAATGGACCAAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCAAATTTGGTCCATTaGGTTTGGATGGTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSNLVH*VWMVAA
Trigger: GGCAGCCACCATCCAAACCAAATGGACCAAATTTGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGACTTTTCCAGGGTATaGGCACTTGACTGCTTTGCA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVDFSRV*ALDCFA
Trigger: TGCAAAGCAGTCAAGTGCCAATACCCTGGAAAAGTC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGAGAGTGCGATGTATTaGTCCTCACAGCAGCTGTAT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVESAMY*SSQQLY
Trigger: ATACAGCTGCTGTGAGGACAAATACATCGCACTCTC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCGCATCTGGTCTTTCTaGGTAGATCACATGGTACTG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRIWSF*VDHMVL
Trigger: CAGTACCATGTGATCTACCAAGAAAGACCAGATGCG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGTTCATCAGTCCGCTaGGGGCAGATTCTAAAGTCT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSSSVR*GQILKS
Trigger: AGACTTTAGAATCTGCCCCAAGCGGACTGATGAACT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCCAGGACCCCATCATaGAAGATGTTGTATGCCTTG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSRTPS*KMLYAL
Trigger: CAAGGCATACAACATCTTCAATGATGGGGTCCTGGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAAGCACTCCATCTCTTaGAAGTCTGTAGCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVKHSIS*KSVALD
Trigger: ATCCAGGGCTACAGACTTCAAAGAGATGGAGTGCTT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp TCCTTCATAGAGCTGCGTAATGTTTGTAAACACATGAGAGATCCATaGAGTAGCAACGTCGTCATCATTGATGAAGGAGAGAGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: SFIELRNVCKHMRDP*SSNVVIIDEGERVG
Trigger: GCCCACCCTCTCTCCTTCATCAATGATGACGACGTTGCTACTTCATGGATCTCTCATGTGTTTACAAACATTACGCAGCTCTATGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp TCAAGTTCAAGTGTCCTTCTGAGACCTCTGGCTTTGTCTCATAAATaGCAGGTATGCTCCTTGTCGAACTGTGCACATTGGAGGTCTCTA +
Preference number: 5 (lower is better)
Translates to: SSSSVLLRPLALSHK*QVCSLSNCAHWRSL
Trigger: TAGAGACCTCCAATGTGCACAGTTCGACAAGGAGCATACCTGTCATTTATGAGACAAAGCCAGAGGTCTCAGAAGGACACTTGAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GGATTACAGGTATTGAAATGTCACTTGGAGTATCTTCCGCTGTGCTaGCTTGCGTTCCATTGCTTTTCACGCAGGCGTCTTTTGTACAGA +
Preference number: 5 (lower is better)
Translates to: GLQVLKCHLEYLPLC*LAFHCFSRRRLLYR
Trigger: TCTGTACAAAAGACGCCTGCGTGAAAAGCAATGGAACGCAAGTCAGCACAGCGGAAGATACTCCAAGTGACATTTCAATACCTGTAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp CAGAGCATGGGCGCCATGTTTTCCGCAAAACGTCATACCCAAGAATaGTACCATTTGGATTTGCTGGTGTTGTCCAATCTATTTGAAGGG +
Preference number: 5 (lower is better)
Translates to: QSMGAMFSAKRHTQE*YHLDLLVLSNLFEG
Trigger: CCCTTCAAATAGATTGGACAACACCAGCAAATCCAAATGGTATCATTCTTGGGTATGACGTTTTGCGGAAAACATGGCGCCCATGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GTGGGGTCATTCGTTTCTGAAGAGGTACCAAGGGAGGTCGCTCTCTaGTACATGGTTCCTTGTGGATTTTTCTTTGTAGAATCAAGGACA +
Preference number: 5 (lower is better)
Translates to: VGSFVSEEVPREVAL*YMVPCGFFFVESRT
Trigger: TGTCCTTGATTCTACAAAGAAAAATCCACAAGGAACCATGTATCAGAGAGCGACCTCCCTTGGTACCTCTTCAGAAACGAATGACCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS CCA 90 bp TGCTACTTGTCTTCTGTACAATTCAAAGCATATGATTTTTCCATTTaGCTGAAGTGGTCCTGCCCACCACACGGCTACTATGGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: CYLSSVQFKAYDFSI*LKWSCPPHGYYGLE
Trigger: TTCCAGCCCATAGTAGCCGTGTGGTGGGCAGGACCACTTCAGCCAAATGGAAAAATCATATGCTTTGAATTGTACAGAAGACAAGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTGAATGCATTAACATaGTCACCACTGCGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLNALT*SPLRKG
Trigger: GCCTTTCCGCAGTGGTGACAATGTTAATGCATTCAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCACACTTAAGTCCTTaGGCTTCCTTCTTGCATGCA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSHLSP*ASFLHA
Trigger: TGCATGCAAGAAGGAAGCCAAAGGACTTAAGTGTGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATTGCGTGGACTCCATaGAAAACCAAGAGGAAAACC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVIAWTP*KTKRKT
Trigger: GGTTTTCCTCTTGGTTTTCAATGGAGTCCACGCAAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGGCCAGGCTGCTACTaGTCTTCTGTACAATTCAAA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRPGCY*SSVQFK
Trigger: TTTGAATTGTACAGAAGACAAGTAGCAGCCTGGCCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTTTGTCCACCATCCTaGGTATGTAGAGTGTGGTGT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFCPPS*VCRVWC
Trigger: ACACCACACTCTACATACCAAGGATGGTGGACAAAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp GGAAGGTGTGTAAGCTCCCAGGATCAAATCCATAGGCATGGCAGCTaGGTCCTGATGAATTGTGAATCAGAGTGTCATCTAGATATAACT +
Preference number: 5 (lower is better)
Translates to: GRCVSSQDQIHRHGS*VLMNCESECHLDIT
Trigger: AGTTATATCTAGATGACACTCTGATTCACAATTCATCAGGACTCAGCTGCCATGCCTATGGATTTGATCCTGGGAGCTTACACACCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCAGATATTGTAACTTaGAACACAATCTGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSDIVT*NTICPS
Trigger: GGACGGGCAGATTGTGTTCAAAGTTACAATATCTGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTCTAAAGTAACTTTCTaGACACTGGTGACAGCTACG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVSKVTF*TLVTAT
Trigger: CGTAGCTGTCACCAGTGTCAAGAAAGTTACTTTAGA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAGATCTCAAAGTCCTTaGCAGCATGAAACGTATCTG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVRSQSP*QHETYL
Trigger: CAGATACGTTTCATGCTGCAAAGGACTTTGAGATCT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTACAGAGCCTTCCTTTTaGATACTGACTGTATTCCAC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVTEPSF*ILTVFH
Trigger: GTGGAATACAGTCAGTATCAAAAAGGAAGGCTCTGT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATGATGGAGCTCATATaGGTCATTTTGATGAGAGGC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVMMELI*VILMRG
Trigger: GCCTCTCATCAAAATGACCAATATGAGCTCCATCAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGCTCGTATCTCAAATTaGGTCCATTTGGTTTGGATG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVARISN*VHLVWM
Trigger: CATCCAAACCAAATGGACCAAATTTGAGATACGAGC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTGGATTTGCTGGTGTaGTCCAATCTATTTGAAGGG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLDLLV*SNLFEG
Trigger: CCCTTCAAATAGATTGGACAACACCAGCAAATCCAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTACACAGTGCTTGGCTaGAGGTCTCTATCTATGAAA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVYTVLG*RSLSMK
Trigger: TTTCATAGATAGAGACCTCAAGCCAAGCACTGTGTA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp ATTATTTACATAGACAGAAGACTCGGTGACAACGGCATTTGGGTTTaGAGGCGATGTCCAGATGACACGTACAGCTGTACTGTTGATGAT +
Preference number: 5 (lower is better)
Translates to: IIYIDRRLGDNGIWV*RRCPDDTYSCTVDD
Trigger: ATCATCAACAGTACAGCTGTACGTGTCATCTGGACATCGCCTTCAAACCCAAATGCCGTTGTCACCGAGTCTTCTGTCTATGTAAATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp TTGAGGTCTCTATCTATGAAAGAGTGTGTGTTTACATCTCCAGAATaGACTATTTCCTCTGCTGCAGAACACAGTCCTTCCACCGCTTTC +
Preference number: 5 (lower is better)
Translates to: LRSLSMKECVFTSPE*TISSAAEHSPSTAF
Trigger: GAAAGCGGTGGAAGGACTGTGTTCTGCAGCAGAGGAAATAGTTCATTCTGGAGATGTAAACACACACTCTTTCATAGATAGAGACCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp TGGTGTCGGCTAATCCCTCAAAATGCATGGTGTAACTTTTTAGGGTaGCATTGCTGGACACGTCAGATATATCAGCCACAGAATCAAACA +
Preference number: 5 (lower is better)
Translates to: WCRLIPQNAWCNFLG*HCWTRQIYQPQNQT
Trigger: TGTTTGATTCTGTGGCTGATATATCTGACGTGTCCAGCAATGTCACCCTAAAAAGTTACACCATGCATTTTGAGGGATTAGCCGACACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000127077.2
CDS CCA 90 bp TGGAGGTTACATTGGCAAGGCTCACATCCATCACCATTAAAACTCTaGAGGAATTTAAATCCGAAATTGCAGCGATTGCATCTAAGCCCA +
Preference number: 5 (lower is better)
Translates to: WRLHWQGSHPSPLKL*RNLNPKLQRLHLSP
Trigger: TGGGCTTAGATGCAATCGCTGCAATTTCGGATTTAAATTCCTCCAGAGTTTTAATGGTGATGGATGTGAGCCTTGCCAATGTAACCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGGCAAGGCTTACAGTaGAATGCATTAACATTGTCA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVWQGLQ*NALTLS
Trigger: TGACAATGTTAATGCATTCAACTGTAAGCCTTGCCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTAGATCTTGAAATGTaGGTTTCTTCCATCTCACGT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVDLEM*VSSISR
Trigger: ACGTGAGATGGAAGAAACCAACATTTCAAGATCTAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTGGAAGAAGAAAATTTaGTCCACCATCCTTGGTATG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVWKKKI*STILGM
Trigger: CATACCAAGGATGGTGGACAAAATTTTCTTCTTCCA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp AGAAGCTCGTATCTCAAATTTGGTCCATTTGGTTTGGATGGTGGCTaGCAAGAAATCCCAACATCAGATTCACTTAGAAGAATCACAGAC +
Preference number: 5 (lower is better)
Translates to: RSSYLKFGPFGLDGG*QEIPTSDSLRRITD
Trigger: GTCTGTGATTCTTCTAAGTGAATCTGATGTTGGGATTTCTTGGCAGCCACCATCCAAACCAAATGGACCAAATTTGAGATACGAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp ACTCAACATGATGGAGCTCATATTGGTCATTTTGATGAGAGGCTCTaGCATTCGTATCTCATAGCTCAGTATATCTCCGTTCTGCATAAG +
Preference number: 5 (lower is better)
Translates to: TQHDGAHIGHFDERL*HSYLIAQYISVLHK
Trigger: CTTATGCAGAACGGAGATATACTGAGCTATGAGATACGAATGCCAGAGCCTCTCATCAAAATGACCAATATGAGCTCCATCATGTTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp CCCGTAGCTGTTCCATGCAGAAATTCTATATTCATACACAGTGCTTaGCTTGAGGTCTCTATCTATGAAAGAGTGTGTGTTTACATCTCC +
Preference number: 5 (lower is better)
Translates to: PVAVPCRNSIFIHSA*LEVSIYERVCVYIS
Trigger: GGAGATGTAAACACACACTCTTTCATAGATAGAGACCTCAAGCCAAGCACTGTGTATGAATATAGAATTTCTGCATGGAACAGCTACGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTGTCATTACTTTTATaGGAGGCTGCAAACCATTTA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVSLLL*EAANHL
Trigger: TAAATGGTTTGCAGCCTCCAATAAAAGTAATGACAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAATCATGGAGAGTTCTaGTATCAAATGCAGTACTGT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVNHGEF*YQMQYC
Trigger: ACAGTACTGCATTTGATACAAGAACTCTCCATGATT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTGTACAATCGAAAATCTaGCATTCTTCCAACAAACTG +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVVQSKI*HSSNKL
Trigger: CAGTTTGTTGGAAGAATGCAAGATTTTCGATTGTAC...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTTTTTCCAAATCTTCATaGTCCTTCATTCCCCAAACA +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVFSKSS*SFIPQT
Trigger: TGTTTGGGGAATGAAGGACAATGAAGATTTGGAAAA...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTAATTTAAATCCGAAATaGCAGCGATTGCATCTAAGC +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVNLNPK*QRLHLS
Trigger: GCTTAGATGCAATCGCTGCAATTTCGGATTTAAATT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATGATAAAACATATTTaGCCACAGGATCAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVMIKHI*PQDQSC
Trigger: ACAGCTCTGATCCTGTGGCAAAATATGTTTTATCAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTATCCTAGCTTTCACATaGATAAGAATTGGAGCATCT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVILAFT*IRIGAS
Trigger: AGATGCTCCAATTCTTATCAATGTGAAAGCTAGGAT...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS-3UTR CAA 90 bp AAAAACAGTGTGCAGAGCATGCATCCCAGGGTTCCACGCTCTAACTTGATTGTTCTCCTCACCATCGCATaGAAGCAAATATTTAACAAT +
Preference number: 5 (lower is better)
Translates to: KNSVQSMHPRVPRSNLIVLLTIA*KQIFNN
Trigger: ATTGTTAAATATTTGCTTCAATGCGATGGTGAGGAG...AACAATCAAGTTAGAGCGTGGAACCCTGGGATGCATGCTCTGCACACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TGCCACAGATTTAAATCTTCTGGGGGATTTGAAGCAAGTGGCTGCTaGATTTTACATCTCAGAAGCTCGTATCTCAAATTTGGTCCATTT +
Preference number: 5 (lower is better)
Translates to: CHRFKSSGGFEASGC*ILHLRSSYLKFGPF
Trigger: AAATGGACCAAATTTGAGATACGAGCTTCTGAGATGTAAAATCCAGCAGCCACTTGCTTCAAATCCCCCAGAAGATTTAAATCTGTGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp AGTGACACATTGTACAATCGAAAATCTTGCATTCTTCCAACAAACTaGTCTGAACCATTTAAACTCTGTCCTACTTGTATCACGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SDTLYNRKSCILPTN*SEPFKLCPTCITLE
Trigger: CTCCAGCGTGATACAAGTAGGACAGAGTTTAAATGGTTCAGAGCAGTTTGTTGGAAGAATGCAAGATTTTCGATTGTACAATGTGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 90 bp TTTTACATCTCAGAAGCTCGTATCTCAAATTTGGTCCATTTGGTTTaGATGGTGGCTGCCAAGAAATCCCAACATCAGATTCACTTAGAA +
Preference number: 5 (lower is better)
Translates to: FYISEARISNLVHLV*MVAAKKSQHQIHLE
Trigger: TTCTAAGTGAATCTGATGTTGGGATTTCTTGGCAGCCACCATCCAAACCAAATGGACCAAATTTGAGATACGAGCTTCTGAGATGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 90 bp CCAAGAATGATACCATTTGGATTTGCTGGTGTTGTCCAATCTATTTaGAGGGATCTTGAAGTAATACCTCGGATTACAGGTATTGAAATG +
Preference number: 5 (lower is better)
Translates to: PRMIPFGFAGVVQSI*RDLEVIPRITGIEM
Trigger: CATTTCAATACCTGTAATCCGAGGTATTACTTCAAGATCCCTTCAAATAGATTGGACAACACCAGCAAATCCAAATGGTATCATTCTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 90 bp AGAATCTCCCTGTTTGTAAGTGACACATTGTACAATCGAAAATCTTaGATTCTTCCAACAAACTGCTCTGAACCATTTAAACTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: RISLFVSDTLYNRKS*ILPTNCSEPFKLCP
Trigger: AGGACAGAGTTTAAATGGTTCAGAGCAGTTTGTTGGAAGAATGCAAGATTTTCGATTGTACAATGTGTCACTTACAAACAGGGAGATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GGAGGCCTCGAGGTGGGGCTTCCAGGGTCTGTATTGTaGACCACGGGCTGTCCACTGCACCCTGGGAGTTCC +
Preference number: 6 (lower is better)
Translates to: GGLEVGLPGSVL*TTGCPLHPGSS
Trigger: GGAACTCCCAGGGTGCAGTGGACAGCCCGTGGTCCACAATACAGACCCTGGAAGCCCCACCTCGAGGCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GCTCGGGTGGAGGAGACGGTGTGGAATGTGGGCGCTTaGAGACCTTCCGGTGGGGCAGGTCCAGTTCTGCAC +
Preference number: 6 (lower is better)
Translates to: ARVEETVWNVGA*RPSGGAGPVLH
Trigger: GTGCAGAACTGGACCTGCCCCACCGGAAGGTCTCCAAGCGCCCACATTCCACACCGTCTCCTCCACCCGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CTGGGAGGCCTCGAGGTGGGGCTTCCAGGGTCTGTATaGTGGACCACGGGCTGTCCACTGCACCCTGGGAGT +
Preference number: 6 (lower is better)
Translates to: LGGLEVGLPGSV*WTTGCPLHPGS
Trigger: ACTCCCAGGGTGCAGTGGACAGCCCGTGGTCCACAATACAGACCCTGGAAGCCCCACCTCGAGGCCTCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CGCTCGGGTGGAGGAGACGGTGTGGAATGTGGGCGCTaGGAGACCTTCCGGTGGGGCAGGTCCAGTTCTGCA +
Preference number: 6 (lower is better)
Translates to: RSGGGDGVECGR*ETFRWGRSSSA
Trigger: TGCAGAACTGGACCTGCCCCACCGGAAGGTCTCCAAGCGCCCACATTCCACACCGTCTCCTCCACCCGAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GTTGACCACCGCTCGGGTGGAGGAGACGGTGTGGAATGTGGGCGCTaGGAGACCTTCCGGTGGGGCAGGTCCAGTTCTGCACCGTGTCCA +
Preference number: 6 (lower is better)
Translates to: VDHRSGGGDGVECGR*ETFRWGRSSSAPCP
Trigger: TGGACACGGTGCAGAACTGGACCTGCCCCACCGGAAGGTCTCCAAGCGCCCACATTCCACACCGTCTCCTCCACCCGAGCGGTGGTCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GTCTGCTGGGTGGCGGTGCCTTCAGACAGCGTGACGTaGGTCCCGCTGGAGTTGGAGAAGACCCTGAAGAGG +
Preference number: 6 (lower is better)
Translates to: VCWVAVPSDSVT*VPLELEKTLKR
Trigger: CCTCTTCAGGGTCTTCTCCAACTCCAGCGGGACGCACGTCACGCTGTCTGAAGGCACCGCCACCCAGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TTGGGAAGGGCCACGGCGACTGGTGCCTGCACCTCCTaGGGCGCTTCTTGTGGAGTGGAGATGCTCAATGCC +
Preference number: 6 (lower is better)
Translates to: LGRATATGACTS*GASCGVEMLNA
Trigger: GGCATTGAGCATCTCCACTCCACAAGAAGCGCCCCAGGAGGTGCAGGCACCAGTCGCCGTGGCCCTTCCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CTGATGTTGACCACCGCTCGGGTGGAGGAGACGGTGTaGAATGTGGGCGCTTGGAGACCTTCCGGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: LMLTTARVEETV*NVGAWRPSGGA
Trigger: TGCCCCACCGGAAGGTCTCCAAGCGCCCACATTCCACACCGTCTCCTCCACCCGAGCGGTGGTCAACATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GCAGGGTGGGTCCTCAGCTCGGCTGTCGGGCCTCGGCTGCAGCAGTaGAAGCAGGTGCAGGCCTCAACCCCAATGGTGTATGTGGTGAAG +
Preference number: 6 (lower is better)
Translates to: AGWVLSSAVGPRLQQ*KQVQASTPMVYVVK
Trigger: CTTCACCACATACACCATTGGGGTTGAGGCCTGCACCTGCTTCAACTGCTGCAGCCGAGGCCCGACAGCCGAGCTGAGGACCCACCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GCAGGCGCATCCCACCTCACGTGGGCTTCCCGGGATCCCTCAGGTTaGACAAGCACGTTGACCACGCCTTCCGGAGGAGCTTCTAGAGTC +
Preference number: 6 (lower is better)
Translates to: AGASHLTWASRDPSG*TSTLTTPSGGASRV
Trigger: GACTCTAGAAGCTCCTCCGGAAGGCGTGGTCAACGTGCTTGTCAAACCTGAGGGATCCCGGGAAGCCCACGTGAGGTGGGATGCGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GGCGTGTCTCCTGCACCATTGGGAATGCAGTACTGCTaGACGGAGGGGTGGACACGGGGGTGGCTACCTGGA +
Preference number: 6 (lower is better)
Translates to: GVSPAPLGMQYC*TEGWTRGWLPG
Trigger: TCCAGGTAGCCACCCCCGTGTCCACCCCTCCGTTCAGCAGTACTGCATTCCCAATGGTGCAGGAGACACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp AGTCCTATCAACACGCCTGAGTGGGTGCTGGTGTCATaGAGCTCAGTGCTGGCAGAGGGCACGCGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: SPINTPEWVLVS*SSVLAEGTRGW
Trigger: CCAGCCCCGCGTGCCCTCTGCCAGCACTGAGCTTCATGACACCAGCACCCACTCAGGCGTGTTGATAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp AGGGAGTTGGCACACTCTGCGGAGCTGTGCCCAATGTaGGTCCCCGACTCCAATCACTGGACACCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: RELAHSAELCPM*VPDSNHWTPLL
Trigger: GAGGAGCGGTGTCCAGTGATTGGAGTCGGGGACGCACATTGGGCACAGCTCCGCAGAGTGTGCCAACTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp AGCCGCCACCGGGCTACGACAAAAAGTGCTAGGGCCTaGGAATCCACACGTGGCGTGGGTTGGCACAGTGGA +
Preference number: 6 (lower is better)
Translates to: SRHRATTKSARA*ESTRGVGWHSG
Trigger: TCCACTGTGCCAACCCACGCCACGTGTGGATTCCCAGGCCCTAGCACTTTTTGTCGTAGCCCGGTGGCGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CTGCTGAACGGAGGGGTGGACACGGGGGTGGCTACCTaGACATCGGCAATGTGGCTGGATGTGCAAGTGAGG +
Preference number: 6 (lower is better)
Translates to: LLNGGVDTGVAT*TSAMWLDVQVR
Trigger: CCTCACTTGCACATCCAGCCACATTGCCGATGTCCAGGTAGCCACCCCCGTGTCCACCCCTCCGTTCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CTGGTGCCTGCACCTCCTGGGGCGCTTCTTGTGGAGTaGAGATGCTCAATGCCTGTGAGCTCTCGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: LVPAPPGALLVE*RCSMPVSSRCS
Trigger: GCTGCACCGAGAGCTCACAGGCATTGAGCATCTCCACTCCACAAGAAGCGCCCCAGGAGGTGCAGGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GGGGCTGGCTGCCTCAGTGGTGGGACCTCTGAGGTTTaGGTAGATGTCCACTCACTGGAGGTACACCCGAGG +
Preference number: 6 (lower is better)
Translates to: GAGCLSGGTSEV*VDVHSLEVHPR
Trigger: CCTCGGGTGTACCTCCAGTGAGTGGACATCTACCCAAACCTCAGAGGTCCCACCACTGAGGCAGCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TCCCACCTCACGTGGGCTTCCCGGGATCCCTCAGGTTaGACAAGCACGTTGACCACGCCTTCCGGAGGAGCT +
Preference number: 6 (lower is better)
Translates to: SHLTWASRDPSG*TSTLTTPSGGA
Trigger: AGCTCCTCCGGAAGGCGTGGTCAACGTGCTTGTCAAACCTGAGGGATCCCGGGAAGCCCACGTGAGGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp CCACCTCAACGCTGGATCCGTTTATGCTCTGGGCTCTTGAGGGAGTaGGCACACTCTGCGGAGCTGTGCCCAATGTGCGTCCCCGACTCC +
Preference number: 6 (lower is better)
Translates to: PPQRWIRLCSGLLRE*AHSAELCPMCVPDS
Trigger: GGAGTCGGGGACGCACATTGGGCACAGCTCCGCAGAGTGTGCCAACTCCCTCAAGAGCCCAGAGCATAAACGGATCCAGCGTTGAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TTCGATGCTCGGGCGTGTCTCCTGCACCATTGGGAATaGAGTACTGCTGAACGGAGGGGTGGACACGGGGGT +
Preference number: 6 (lower is better)
Translates to: FDARACLLHHWE*STAERRGGHGG
Trigger: ACCCCCGTGTCCACCCCTCCGTTCAGCAGTACTGCATTCCCAATGGTGCAGGAGACACGCCCGAGCATCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CAGGGTGAAATACTCTTCCTGGTCGCCAGGGGACAGTaGCAGGAGGATCAGCCCTTCAGGCACCCTTGTCCG +
Preference number: 6 (lower is better)
Translates to: QGEILFLVARGQ*QEDQPFRHPCP
Trigger: CGGACAAGGGTGCCTGAAGGGCTGATCCTCCTGGCACTGTCCCCTGGCGACCAGGAAGAGTATTTCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GGGCTCTTGAGGGAGTTGGCACACTCTGCGGAGCTGTaGCCAATGTGCGTCCCCGACTCCAATCACTGGACA +
Preference number: 6 (lower is better)
Translates to: GLLRELAHSAEL*PMCVPDSNHWT
Trigger: TGTCCAGTGATTGGAGTCGGGGACGCACATTGGGCACAGCTCCGCAGAGTGTGCCAACTCCCTCAAGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TTCCAGGGTCTGTATTGTGGACCACGGGCTGTCCACTaGACCCTGGGAGTTCCAGGCTCTCACCCGGTACTC +
Preference number: 6 (lower is better)
Translates to: FQGLYCGPRAVH*TLGVPGSHPVL
Trigger: GAGTACCGGGTGAGAGCCTGGAACTCCCAGGGTGCAGTGGACAGCCCGTGGTCCACAATACAGACCCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GAATCGTCTCCTCCATTAGGGCCTGGCTGGGCTCACTaGTTGTGCAGCCCCCACCGGTACACACTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: ESSPPLGPGWAH*LCSPHRYTLSA
Trigger: GGCTGAGAGTGTGTACCGGTGGGGGCTGCACAACAAGTGAGCCCAGCCAGGCCCTAATGGAGGAGACGATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TGGGCTTCCCGGGATCCCTCAGGTTTGACAAGCACGTaGACCACGCCTTCCGGAGGAGCTTCTAGAGTCCGG +
Preference number: 6 (lower is better)
Translates to: WASRDPSGLTST*TTPSGGASRVR
Trigger: CCGGACTCTAGAAGCTCCTCCGGAAGGCGTGGTCAACGTGCTTGTCAAACCTGAGGGATCCCGGGAAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp CACCTCACGTGGGCTTCCCGGGATCCCTCAGGTTTGACAAGCACGTaGACCACGCCTTCCGGAGGAGCTTCTAGAGTCCGGTTTCCTACC +
Preference number: 6 (lower is better)
Translates to: HLTWASRDPSGLTST*TTPSGGASRVRFPT
Trigger: GGTAGGAAACCGGACTCTAGAAGCTCCTCCGGAAGGCGTGGTCAACGTGCTTGTCAAACCTGAGGGATCCCGGGAAGCCCACGTGAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp TGGGTGGCGGTGCCTTCAGACAGCGTGACGTGCGTCCCGCTGGAGTaGGAGAAGACCCTGAAGAGGCTGATGTTCCCATTGGGTCTCGAA +
Preference number: 6 (lower is better)
Translates to: WVAVPSDSVTCVPLE*EKTLKRLMFPLGLE
Trigger: TTCGAGACCCAATGGGAACATCAGCCTCTTCAGGGTCTTCTCCAACTCCAGCGGGACGCACGTCACGCTGTCTGAAGGCACCGCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GGGCGCTTCTTGTGGAGTGGAGATGCTCAATGCCTGTaGGCTCTCGGTGCAGCCTGCCCGAGAACAAGCAGT +
Preference number: 6 (lower is better)
Translates to: GRFLWSGDAQCL*ALGAACPRTSS
Trigger: ACTGCTTGTTCTCGGGCAGGCTGCACCGAGAGCTCACAGGCATTGAGCATCTCCACTCCACAAGAAGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GGAGCGTTGTTGCGAGCTGGTGTAGACCAGACAACCTaGAGACTGGTTGGAGCGGCAGCTGCAAGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: GALLRAGVDQTT*RLVGAAAASLG
Trigger: TCCCAGGCTTGCAGCTGCCGCTCCAACCAGTCTTCAGGTTGTCTGGTCTACACCAGCTCGCAACAACGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp AGAGGGTGGGCTTCGGGATTCAGCCGTGACATTCGATaGTCGGGCGTGTCTCCTGCACCATTGGGAATGCAG +
Preference number: 6 (lower is better)
Translates to: RGWASGFSRDIR*SGVSPAPLGMQ
Trigger: CTGCATTCCCAATGGTGCAGGAGACACGCCCGAGCATCGAATGTCACGGCTGAATCCCGAAGCCCACCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GTGGAGTGGAGATGCTCAATGCCTGTGAGCTCTCGGTaGAGCCTGCCCGAGAACAAGCAGTCAGGGTTACCG +
Preference number: 6 (lower is better)
Translates to: VEWRCSMPVSSR*SLPENKQSGLP
Trigger: CGGTAACCCTGACTGCTTGTTCTCGGGCAGGCTGCACCGAGAGCTCACAGGCATTGAGCATCTCCACTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp AGCCTTCAGAAGAGGGGGCATCAGACCCACGGGTGCTaGTTCAAGCGTTCTGACGTATGTCCCAGGGCTGAC +
Preference number: 6 (lower is better)
Translates to: SLQKRGHQTHGC*FKRSDVCPRAD
Trigger: GTCAGCCCTGGGACATACGTCAGAACGCTTGAAGCAGCACCCGTGGGTCTGATGCCCCCTCTTCTGAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TGTCCAGAGAGGCTGAGGCACCGAGTGAGCACAGCCTaGTGTCGTGCAGGCCTCCAGGATCAAGGTATAGAG +
Preference number: 6 (lower is better)
Translates to: CPERLRHRVSTA*CRAGLQDQGIE
Trigger: CTCTATACCTTGATCCTGGAGGCCTGCACGACAGCAGGCTGTGCTCACTCGGTGCCTCAGCCTCTCTGGACA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CCTGTAGCTGTCTGCACCTCCAGATGTGGGGCTGGCTaGCTCAGTGGTGGGACCTCTGAGGTTTGGGTAGAT +
Preference number: 6 (lower is better)
Translates to: PVAVCTSRCGAG*LSGGTSEVWVD
Trigger: ATCTACCCAAACCTCAGAGGTCCCACCACTGAGGCAGCCAGCCCCACATCTGGAGGTGCAGACAGCTACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GACTCCTCCACCGCCTCTGTTGTGTTCCAGGGGAAATaGGTCCACAGAAGCATCGTAGTGGCAGCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: DSSTASVVFQGK*VHRSIVVAAAG
Trigger: GCCAGCAGCTGCCACTACGATGCTTCTGTGGACCCATTTCCCCTGGAACACAACAGAGGCGGTGGAGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GCTCTGTCCAGTTTAGCATGGCTGAATGAGCACTGGTaGCTTGAACCCGTGGTGCTGGGAGGCCTCGAGGTG +
Preference number: 6 (lower is better)
Translates to: ALSSLAWLNEHW*LEPVVLGGLEV
Trigger: CACCTCGAGGCCTCCCAGCACCACGGGTTCAAGCCACCAGTGCTCATTCAGCCATGCTAAACTGGACAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CTGGCTCTGTCCAGTTTAGCATGGCTGAATGAGCACTaGTGGCTTGAACCCGTGGTGCTGGGAGGCCTCGAG +
Preference number: 6 (lower is better)
Translates to: LALSSLAWLNEH*WLEPVVLGGLE
Trigger: CTCGAGGCCTCCCAGCACCACGGGTTCAAGCCACCAGTGCTCATTCAGCCATGCTAAACTGGACAGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GGCCATTGGGGGCCTCTGGCTCTGTCCAGTTTAGCATaGCTGAATGAGCACTGGTGGCTTGAACCCGTGGTG +
Preference number: 6 (lower is better)
Translates to: GHWGPLALSSLA*LNEHWWLEPVV
Trigger: CACCACGGGTTCAAGCCACCAGTGCTCATTCAGCCATGCTAAACTGGACAGAGCCAGAGGCCCCCAATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CGCTGGATCCGTTTATGCTCTGGGCTCTTGAGGGAGTaGGCACACTCTGCGGAGCTGTGCCCAATGTGCGTC +
Preference number: 6 (lower is better)
Translates to: RWIRLCSGLLRE*AHSAELCPMCV
Trigger: GACGCACATTGGGCACAGCTCCGCAGAGTGTGCCAACTCCCTCAAGAGCCCAGAGCATAAACGGATCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CCACCTCAACGCTGGATCCGTTTATGCTCTGGGCTCTaGAGGGAGTTGGCACACTCTGCGGAGCTGTGCCCA +
Preference number: 6 (lower is better)
Translates to: PPQRWIRLCSGL*RELAHSAELCP
Trigger: TGGGCACAGCTCCGCAGAGTGTGCCAACTCCCTCAAGAGCCCAGAGCATAAACGGATCCAGCGTTGAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp CATTCCAGGCCACCTCAACGCTGGATCCGTTTATGCTCTGGGCTCTaGAGGGAGTTGGCACACTCTGCGGAGCTGTGCCCAATGTGCGTC +
Preference number: 6 (lower is better)
Translates to: HSRPPQRWIRLCSGL*RELAHSAELCPMCV
Trigger: GACGCACATTGGGCACAGCTCCGCAGAGTGTGCCAACTCCCTCAAGAGCCCAGAGCATAAACGGATCCAGCGTTGAGGTGGCCTGGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GCACACGCACTGTGGGTGGCTGTACTCCGGAAGGCCGACAGGGTCTaGTGGTCACTTCTACCCAAGCACTGCTGTTTGTGCCCCCATCAA +
Preference number: 6 (lower is better)
Translates to: AHALWVAVLRKADRV*WSLLPKHCCLCPHQ
Trigger: TTGATGGGGGCACAAACAGCAGTGCTTGGGTAGAAGTGACCACAAGACCCTGTCGGCCTTCCGGAGTACAGCCACCCACAGTGCGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GGTGGGACATTCTCCGGGCTTCTTTGGGTGGTGGCAGCGACTACCTaGCAACTGACAGCACAACCAGCAGCTGTGCAAGCCTTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: GGTFSGLLWVVAATT*QLTAQPAAVQAFSW
Trigger: CCAGCTGAAGGCTTGCACAGCTGCTGGTTGTGCTGTCAGTTGCAAGGTAGTCGCTGCCACCACCCAAAGAAGCCCGGAGAATGTCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp ACTGGAGGGCTGACTTCTGATGGAGGTACCTCAGGAGTGGTGATGTaGGTGGGTTCACTGGTACAGCAGCCACCACCTGTGCAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: TGGLTSDGGTSGVVM*VGSLVQQPPPVQAR
Trigger: CCTGGCCTGCACAGGTGGTGGCTGCTGTACCAGTGAACCCACCAACATCACCACTCCTGAGGTACCTCCATCAGAAGTCAGCCCTCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp CTGAAGAGGCTGATGTTCCCATTGGGTCTCGAAGGCACACTGATGTaGACCACCGCTCGGGTGGAGGAGACGGTGTGGAATGTGGGCGCT +
Preference number: 6 (lower is better)
Translates to: LKRLMFPLGLEGTLM*TTARVEETVWNVGA
Trigger: AGCGCCCACATTCCACACCGTCTCCTCCACCCGAGCGGTGGTCAACATCAGTGTGCCTTCGAGACCCAATGGGAACATCAGCCTCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp AGAGCGGTAGGGGCAATCCTGGATACACAGCCTCTCCGTACACAGTaGCACATGCTCAGCCGCCACCGGGCTACGACAAAAAGTGCTAGG +
Preference number: 6 (lower is better)
Translates to: RAVGAILDTQPLRTQ*HMLSRHRATTKSAR
Trigger: CCTAGCACTTTTTGTCGTAGCCCGGTGGCGGCTGAGCATGTGCAACTGTGTACGGAGAGGCTGTGTATCCAGGATTGCCCCTACCGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp ATCCCATTTGCTTGTCTGGGTAGACTCCAAAAGAATGACAAGGAGTaGGGAAGGGCCACGGCGACTGGTGCCTGCACCTCCTGGGGCGCT +
Preference number: 6 (lower is better)
Translates to: IPFACLGRLQKNDKE*GRATATGACTSWGA
Trigger: AGCGCCCCAGGAGGTGCAGGCACCAGTCGCCGTGGCCCTTCCCAACTCCTTGTCATTCTTTTGGAGTCTACCCAGACAAGCAAATGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp AGCATGCACGGTAGAACTGCCGGGTGCTGCCGCATCTGGTCTTTCTaGGTAGATCACATGGTACTGGGAGATGAGGCCATTGGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: SMHGRTAGCCRIWSF*VDHMVLGDEAIGGL
Trigger: GAGGCCCCCAATGGCCTCATCTCCCAGTACCATGTGATCTACCAAGAAAGACCAGATGCGGCAGCACCCGGCAGTTCTACCGTGCATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GCTGACACTGCGGTGGAGAGAGCTCTGGGAGTAGGCGTGGCTCAGTaGGCTTTGACTTGGGATCCGCAGTACAGACACACTTTGGCTGCT +
Preference number: 6 (lower is better)
Translates to: ADTAVERALGVGVAQ*ALTWDPQYRHTLAA
Trigger: AGCAGCCAAAGTGTGTCTGTACTGCGGATCCCAAGTCAAAGCCAACTGAGCCACGCCTACTCCCAGAGCTCTCTCCACCGCAGTGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS TCA 72 bp CCCGTAGAGACGGGCAGTTCTGGTGACTTCCGAACATaGAGCTCACGGAGCTGCTCCTGGAGTAAGGGTGGA +
Preference number: 6 (lower is better)
Translates to: PVETGSSGDFRT*SSRSCSWSKGG
Trigger: TCCACCCTTACTCCAGGAGCAGCTCCGTGAGCTTCATGTTCGGAAGTCACCAGAACTGCCCGTCTCTACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GATGAAGGAGAGAGGGTGGGCTTCGGGATTCAGCCGTaGCATTCGATGCTCGGGCGTGTCTCCTGCACCATT +
Preference number: 6 (lower is better)
Translates to: DEGERVGFGIQP*HSMLGRVSCTI
Trigger: AATGGTGCAGGAGACACGCCCGAGCATCGAATGTCACGGCTGAATCCCGAAGCCCACCCTCTCTCCTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp CACCTCAACGCTGGATCCGTTTATGCTCTGGGCTCTTaGGGGAGTTGGCACACTCTGCGGAGCTGTGCCCAA +
Preference number: 6 (lower is better)
Translates to: HLNAGSVYALGS*GSWHTLRSCAQ
Trigger: TTGGGCACAGCTCCGCAGAGTGTGCCAACTCCCTCAAGAGCCCAGAGCATAAACGGATCCAGCGTTGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp CAGATGTGGGGCTGGCTGCCTCAGTGGTGGGACCTCTaGGGTTTGGGTAGATGTCCACTCACTGGAGGTACA +
Preference number: 6 (lower is better)
Translates to: QMWGWLPQWWDL*GLGRCPLTGGT
Trigger: TGTACCTCCAGTGAGTGGACATCTACCCAAACCTCAGAGGTCCCACCACTGAGGCAGCCAGCCCCACATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp ACCCCAATGGTGTATGTGGTGAAGGGACTCAGGTCATaGAGGGTCTGCTGGGTGGCGGTGCCTTCAGACAGC +
Preference number: 6 (lower is better)
Translates to: TPMVYVVKGLRS*RVCWVAVPSDS
Trigger: GCTGTCTGAAGGCACCGCCACCCAGCAGACCCTTCATGACCTGAGTCCCTTCACCACATACACCATTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp AGCAGGTGCAGGCCTCAACCCCAATGGTGTATGTGGTaGAGGGACTCAGGTCATGAAGGGTCTGCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: SRCRPQPQWCMW*RDSGHEGSAGW
Trigger: CCACCCAGCAGACCCTTCATGACCTGAGTCCCTTCACCACATACACCATTGGGGTTGAGGCCTGCACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TTTATGCTCTGGGCTCTTGAGGGAGTTGGCACACTCTaGGGAGCTGTGCCCAATGTGCGTCCCCGACTCCAA +
Preference number: 6 (lower is better)
Translates to: FMLWALEGVGTL*GAVPNVRPRLQ
Trigger: TTGGAGTCGGGGACGCACATTGGGCACAGCTCCGCAGAGTGTGCCAACTCCCTCAAGAGCCCAGAGCATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GCTCATTCCAGGCCACCTCAACGCTGGATCCGTTTATaGTCTGGGCTCTTGAGGGAGTTGGCACACTCTGCG +
Preference number: 6 (lower is better)
Translates to: AHSRPPQRWIRL*SGLLRELAHSA
Trigger: CGCAGAGTGTGCCAACTCCCTCAAGAGCCCAGAGCATAAACGGATCCAGCGTTGAGGTGGCCTGGAATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CAAACCCGGGGGATCCACTTGCTCTGGCGGCAGCTGTaGTGTGTGCAAGATGACTTGGGAGCTGTTTGTGCA +
Preference number: 6 (lower is better)
Translates to: QTRGIHLLWRQL*CVQDDLGAVCA
Trigger: TGCACAAACAGCTCCCAAGTCATCTTGCACACAGCACAGCTGCCGCCAGAGCAAGTGGATCCCCCGGGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp AAGTGGGGCTTTCCAAGAGACCTCGACTGTATCTGGTaGCAGCACACGCACTGTGGGTGGCTGTACTCCGGA +
Preference number: 6 (lower is better)
Translates to: KWGFPRDLDCIW*QHTHCGWLYSG
Trigger: TCCGGAGTACAGCCACCCACAGTGCGTGTGCTGGCACCAGATACAGTCGAGGTCTCTTGGAAAGCCCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GACCACTGCAGCAGCAAAGCCCGGCCCTTTTCTCTCTaGTCCACTGTGAAGTTCATCAGTCCGCTTGGGGCA +
Preference number: 6 (lower is better)
Translates to: DHCSSKARPFSL*STVKFISPLGA
Trigger: TGCCCCAAGCGGACTGATGAACTTCACAGTGGAGCAGAGAGAAAAGGGCCGGGCTTTGCTGCTGCAGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GTGACATTCGATGCTCGGGCGTGTCTCCTGCACCATTaGGAATGCAGTACTGCTGAACGGAGGGGTGGACAC +
Preference number: 6 (lower is better)
Translates to: VTFDARACLLHH*ECSTAERRGGH
Trigger: GTGTCCACCCCTCCGTTCAGCAGTACTGCATTCCCAATGGTGCAGGAGACACGCCCGAGCATCGAATGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CAGTCCTCCCAGGGAGAGCTGTCTGCCTTCTTCCTCTaGATCCGAATTGCCACAGGCTGTAGGCTGGAGAAC +
Preference number: 6 (lower is better)
Translates to: QSSQGELSAFFL*IRIATGCRLEN
Trigger: GTTCTCCAGCCTACAGCCTGTGGCAATTCGGATCCAGAGGAAGAAGGCAGACAGCTCTCCCTGGGAGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GTGTGTGGCTCCAAGCCAGAGATGAACGTGCTGGCTTaGGGCTGCTGGAGCAGGTTCTTACTCGGATTGACC +
Preference number: 6 (lower is better)
Translates to: VCGSKPEMNVLA*GCWSRFLLGLT
Trigger: GGTCAATCCGAGTAAGAACCTGCTCCAGCAGCCCCAAGCCAGCACGTTCATCTCTGGCTTGGAGCCACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CGGCCATTCTTCAACTGCAGGGTGAAATACTCTTCCTaGTCGCCAGGGGACAGTGCCAGGAGGATCAGCCCT +
Preference number: 6 (lower is better)
Translates to: RPFFNCRVKYSS*SPGDSARRISP
Trigger: AGGGCTGATCCTCCTGGCACTGTCCCCTGGCGACCAGGAAGAGTATTTCACCCTGCAGTTGAAGAATGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TTCCAGGCCACCTCAACGCTGGATCCGTTTATGCTCTaGGCTCTTGAGGGAGTTGGCACACTCTGCGGAGCT +
Preference number: 6 (lower is better)
Translates to: FQATSTLDPFML*ALEGVGTLCGA
Trigger: AGCTCCGCAGAGTGTGCCAACTCCCTCAAGAGCCCAGAGCATAAACGGATCCAGCGTTGAGGTGGCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp ATCCAGGACAGTCAAACCCGGGGGATCCACTTGCTCTaGCGGCAGCTGTGCTGTGTGCAAGATGACTTGGGA +
Preference number: 6 (lower is better)
Translates to: IQDSQTRGIHLL*RQLCCVQDDLG
Trigger: TCCCAAGTCATCTTGCACACAGCACAGCTGCCGCCAGAGCAAGTGGATCCCCCGGGTTTGACTGTCCTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CTGGTATCTGGGAGAGCCCGGAGCGTTGTTGCGAGCTaGTGTAGACCAGACAACCTGAAGACTGGTTGGAGC +
Preference number: 6 (lower is better)
Translates to: LVSGRARSVVAS*CRPDNLKTGWS
Trigger: GCTCCAACCAGTCTTCAGGTTGTCTGGTCTACACCAGCTCGCAACAACGCTCCGGGCTCTCCCAGATACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GGGCAGCCTGCAGAGTCTGACCTACACAGGGCTCACTaGAAGTGCATCCGACAGATGTACAAACCGCGAGTG +
Preference number: 6 (lower is better)
Translates to: GQPAESDLHRAH*KCIRQMYKPRV
Trigger: CACTCGCGGTTTGTACATCTGTCGGATGCACTTCCAGTGAGCCCTGTGTAGGTCAGACTCTGCAGGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GTCTGTATTGTGGACCACGGGCTGTCCACTGCACCCTaGGAGTTCCAGGCTCTCACCCGGTACTCATACAGT +
Preference number: 6 (lower is better)
Translates to: VCIVDHGLSTAP*EFQALTRYSYS
Trigger: ACTGTATGAGTACCGGGTGAGAGCCTGGAACTCCCAGGGTGCAGTGGACAGCCCGTGGTCCACAATACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CACTGGTACAGCAGCCACCACCTGTGCAGGCCAGGATaGCATAACTGTACGTTGAGAAGGGAAGCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: HWYSSHHLCRPG*HNCTLRREAAG
Trigger: GCCAGCTGCTTCCCTTCTCAACGTACAGTTATGCCATCCTGGCCTGCACAGGTGGTGGCTGCTGTACCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CTCCGTCCTCCGTCGGTGACCACGTACTCCTTTAGATaGCCGTTCAGGAGAAAAGTGCCACTCCAGTCCACC +
Preference number: 6 (lower is better)
Translates to: LRPPSVTTYSFR*PFRRKVPLQST
Trigger: GGTGGACTGGAGTGGCACTTTTCTCCTGAACGGCCATCTAAAGGAGTACGTGGTCACCGACGGAGGACGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GCTCTGGGAGTAGGCGTGGCTCAGTTGGCTTTGACTTaGGATCCGCAGTACAGACACACTTTGGCTGCTCCG +
Preference number: 6 (lower is better)
Translates to: ALGVGVAQLALT*DPQYRHTLAAP
Trigger: CGGAGCAGCCAAAGTGTGTCTGTACTGCGGATCCCAAGTCAAAGCCAACTGAGCCACGCCTACTCCCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS CAA 72 bp GGGGCAATCCTGGATACACAGCCTCTCCGTACACAGTaGCACATGCTCAGCCGCCACCGGGCTACGACAAAA +
Preference number: 6 (lower is better)
Translates to: GAILDTQPLRTQ*HMLSRHRATTK
Trigger: TTTTGTCGTAGCCCGGTGGCGGCTGAGCATGTGCAACTGTGTACGGAGAGGCTGTGTATCCAGGATTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GCTTGTCTGGGTAGACTCCAAAAGAATGACAAGGAGTaGGGAAGGGCCACGGCGACTGGTGCCTGCACCTCC +
Preference number: 6 (lower is better)
Translates to: ACLGRLQKNDKE*GRATATGACTS
Trigger: GGAGGTGCAGGCACCAGTCGCCGTGGCCCTTCCCAACTCCTTGTCATTCTTTTGGAGTCTACCCAGACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CTGTGGGTGGCTGTACTCCGGAAGGCCGACAGGGTCTaGTGGTCACTTCTACCCAAGCACTGCTGTTTGTGC +
Preference number: 6 (lower is better)
Translates to: LWVAVLRKADRV*WSLLPKHCCLC
Trigger: GCACAAACAGCAGTGCTTGGGTAGAAGTGACCACAAGACCCTGTCGGCCTTCCGGAGTACAGCCACCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TTCTCCGGGCTTCTTTGGGTGGTGGCAGCGACTACCTaGCAACTGACAGCACAACCAGCAGCTGTGCAAGCC +
Preference number: 6 (lower is better)
Translates to: FSGLLWVVAATT*QLTAQPAAVQA
Trigger: GGCTTGCACAGCTGCTGGTTGTGCTGTCAGTTGCAAGGTAGTCGCTGCCACCACCCAAAGAAGCCCGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GTGCCTTCAGACAGCGTGACGTGCGTCCCGCTGGAGTaGGAGAAGACCCTGAAGAGGCTGATGTTCCCATTG +
Preference number: 6 (lower is better)
Translates to: VPSDSVTCVPLE*EKTLKRLMFPL
Trigger: CAATGGGAACATCAGCCTCTTCAGGGTCTTCTCCAACTCCAGCGGGACGCACGTCACGCTGTCTGAAGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GCGGTGGAGAGAGCTCTGGGAGTAGGCGTGGCTCAGTaGGCTTTGACTTGGGATCCGCAGTACAGACACACT +
Preference number: 6 (lower is better)
Translates to: AVERALGVGVAQ*ALTWDPQYRHT
Trigger: AGTGTGTCTGTACTGCGGATCCCAAGTCAAAGCCAACTGAGCCACGCCTACTCCCAGAGCTCTCTCCACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS CAA 90 bp GCCAGCCCCAGCCTGAGATCCACGCGTGTAAAGACGAGACTGGAATaGAACTTGAAGCTCAGCAGCCCTCTCTTCAGCTCCACCGCAAGA +
Preference number: 6 (lower is better)
Translates to: ASPSLRSTRVKTRLE*NLKLSSPLFSSTAR
Trigger: TCTTGCGGTGGAGCTGAAGAGAGGGCTGCTGAGCTTCAAGTTCAATTCCAGTCTCGTCTTTACACGCGTGGATCTCAGGCTGGGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GACCTTCCGGTGGGGCAGGTCCAGTTCTGCACCGTGTCCAGTTACTaGCAGCTTTGCCTGCAGAATTCACCGCCCATACCTGGTATTCGT +
Preference number: 6 (lower is better)
Translates to: DLPVGQVQFCTVSSY*QLCLQNSPPIPGIR
Trigger: ACGAATACCAGGTATGGGCGGTGAATTCTGCAGGCAAAGCTGCAAGTAACTGGACACGGTGCAGAACTGGACCTGCCCCACCGGAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp ACTGCGGTGGAGAGAGCTCTGGGAGTAGGCGTGGCTCAGTTGGCTTaGACTTGGGATCCGCAGTACAGACACACTTTGGCTGCTCCGAAT +
Preference number: 6 (lower is better)
Translates to: TAVERALGVGVAQLA*TWDPQYRHTLAAPN
Trigger: ATTCGGAGCAGCCAAAGTGTGTCTGTACTGCGGATCCCAAGTCAAAGCCAACTGAGCCACGCCTACTCCCAGAGCTCTCTCCACCGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS TCA 72 bp AGTATTCCTGGAGTGGCTGAATTCCCTGCGTGTCCGTaGAGCTCAGCGCTGTTCCCTGAAAGCGCTCCCTTC +
Preference number: 6 (lower is better)
Translates to: SIPGVAEFPACP*SSALFPESAPF
Trigger: GAAGGGAGCGCTTTCAGGGAACAGCGCTGAGCTTCACGGACACGCAGGGAATTCAGCCACTCCAGGAATACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GGCTTCTTTGGGTGGTGGCAGCGACTACCTTGCAACTaGCAGCACAACCAGCAGCTGTGCAAGCCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: GFFGWWQRLPCN*QHNQQLCKPSA
Trigger: AGCTGAAGGCTTGCACAGCTGCTGGTTGTGCTGTCAGTTGCAAGGTAGTCGCTGCCACCACCCAAAGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp TGTCTAGGCCACTGTACACCCTCCGTCCTCCGTCGGTaGCCACGTACTCCTTTAGATGGCCGTTCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: CLGHCTPSVLRR*PRTPLDGRSGE
Trigger: TTCTCCTGAACGGCCATCTAAAGGAGTACGTGGTCACCGACGGAGGACGGAGGGTGTACAGTGGCCTAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GGGCAATCCTGGATACACAGCCTCTCCGTACACAGTTaGACATGCTCAGCCGCCACCGGGCTACGACAAAAA +
Preference number: 6 (lower is better)
Translates to: GQSWIHSLSVHS*TCSAATGLRQK
Trigger: TTTTTGTCGTAGCCCGGTGGCGGCTGAGCATGTGCAACTGTGTACGGAGAGGCTGTGTATCCAGGATTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GGCAAAATACTGCCAGTCCTCCCAGGGAGAGCTGTCTaGCTTCTTCCTCTGGATCCGAATTGCCACAGGCTG +
Preference number: 6 (lower is better)
Translates to: GKILPVLPGRAV*LLPLDPNCHRL
Trigger: CAGCCTGTGGCAATTCGGATCCAGAGGAAGAAGGCAGACAGCTCTCCCTGGGAGGACTGGCAGTATTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GGAAGGGATGAAGTCCTATCAACACGCCTGAGTGGGTaGTGGTGTCATGAAGCTCAGTGCTGGCAGAGGGCA +
Preference number: 6 (lower is better)
Translates to: GRDEVLSTRLSG*WCHEAQCWQRA
Trigger: TGCCCTCTGCCAGCACTGAGCTTCATGACACCAGCACCCACTCAGGCGTGTTGATAGGACTTCATCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CTAGAATCCAGGACAGTCAAACCCGGGGGATCCACTTaGTCTGGCGGCAGCTGTGCTGTGTGCAAGATGACT +
Preference number: 6 (lower is better)
Translates to: LESRTVKPGGST*SGGSCAVCKMT
Trigger: AGTCATCTTGCACACAGCACAGCTGCCGCCAGAGCAAGTGGATCCCCCGGGTTTGACTGTCCTGGATTCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CCATCTCACGTCTATGGCTGTGTGATTAAGGATGCTTaGGGTGACCGTGGCTCCTCTCTCTGGAGAGCCTGC +
Preference number: 6 (lower is better)
Translates to: PSHVYGCVIKDA*GDRGSSLWRAC
Trigger: GCAGGCTCTCCAGAGAGAGGAGCCACGGTCACCGCAAGCATCCTTAATCACACAGCCATAGACGTGAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp ATGGGTGGTGGCGTTGAAGTCACACCTCCCACAGTGTaGTGTGGCTTTCATGGTTGCTGGGCAGATAGTCGC +
Preference number: 6 (lower is better)
Translates to: MGGGVEVTPPTV*CGFHGCWADSR
Trigger: GCGACTATCTGCCCAGCAACCATGAAAGCCACAGCACACTGTGGGAGGTGTGACTTCAACGCCACCACCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TGGGGCAGGTCCAGTTCTGCACCGTGTCCAGTTACTTaGAGCTTTGCCTGCAGAATTCACCGCCCATACCTG +
Preference number: 6 (lower is better)
Translates to: WGRSSSAPCPVT*SFACRIHRPYL
Trigger: CAGGTATGGGCGGTGAATTCTGCAGGCAAAGCTGCAAGTAACTGGACACGGTGCAGAACTGGACCTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp AAGTGCCACTCCAGTCCACCCACACCATGGATGCGTTaGTGTCCACTGAGAACAGGGCTTGGTACTGAGGCA +
Preference number: 6 (lower is better)
Translates to: KCHSSPPTPWMR*CPLRTGLGTEA
Trigger: TGCCTCAGTACCAAGCCCTGTTCTCAGTGGACAGCAACGCATCCATGGTGTGGGTGGACTGGAGTGGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CAAAAAGTGCTAGGGCCTGGGAATCCACACGTGGCGTaGGTTGGCACAGTGGATACCTTCCTGAAAGCACCC +
Preference number: 6 (lower is better)
Translates to: QKVLGPGNPHVA*VGTVDTFLKAP
Trigger: GGGTGCTTTCAGGAAGGTATCCACTGTGCCAACCCACGCCACGTGTGGATTCCCAGGCCCTAGCACTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GGCCGTCTGGTCCTGTCACAGGTCTCAGCATGGCCGTaGCATTGGCATCTTCCACTGACAATGATCTCATCC +
Preference number: 6 (lower is better)
Translates to: GRLVLSQVSAWP*HWHLPLTMISS
Trigger: GGATGAGATCATTGTCAGTGGAAGATGCCAATGCCACGGCCATGCTGAGACCTGTGACAGGACCAGACGGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TGCTCTGGCGGCAGCTGTGCTGTGTGCAAGATGACTTaGGAGCTGTTTGTGCACCCTGCTTGTGTGCATGCA +
Preference number: 6 (lower is better)
Translates to: CSGGSCAVCKMT*ELFVHPACVHA
Trigger: TGCATGCACACAAGCAGGGTGCACAAACAGCTCCCAAGTCATCTTGCACACAGCACAGCTGCCGCCAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CATAAGTGGGGCTTTCCAAGAGACCTCGACTGTATCTaGTGCCAGCACACGCACTGTGGGTGGCTGTACTCC +
Preference number: 6 (lower is better)
Translates to: HKWGFPRDLDCI*CQHTHCGWLYS
Trigger: GGAGTACAGCCACCCACAGTGCGTGTGCTGGCACCAGATACAGTCGAGGTCTCTTGGAAAGCCCCACTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CCGGTTGTGCCTCTCATCGGGGCAGCATATCTCTCCTaGAAGGATTCTAGCGTAATGCCCAGAGCAGCACTG +
Preference number: 6 (lower is better)
Translates to: PVVPLIGAAYLS*KDSSVMPRAAL
Trigger: CAGTGCTGCTCTGGGCATTACGCTAGAATCCTTCCAGGAGAGATATGCTGCCCCGATGAGAGGCACAACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GTGGGATTGAGAGGCCCTCTCATCACCGTGCAGATATaGGTGGTGGCGTTGAAGTCACACCTCCCACAGTGT +
Preference number: 6 (lower is better)
Translates to: VGLRGPLITVQI*VVALKSHLPQC
Trigger: ACACTGTGGGAGGTGTGACTTCAACGCCACCACCCATATCTGCACGGTGATGAGAGGGCCTCTCAATCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TCCCACATGGGTTTCCCCTGGTGGGTAGACGCTCAGTaGGGTCATTCGTTTCTGAAGAGGTACCAAGGGAGG +
Preference number: 6 (lower is better)
Translates to: SHMGFPWWVDAQ*GHSFLKRYQGR
Trigger: CCTCCCTTGGTACCTCTTCAGAAACGAATGACCCCACTGAGCGTCTACCCACCAGGGGAAACCCATGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TGTGTGTGGCTCCAAGCCAGAGATGAACGTGCTGGCTaGGGGCTGCTGGAGCAGGTTCTTACTCGGATTGAC +
Preference number: 6 (lower is better)
Translates to: CVWLQARDERAG*GLLEQVLTRID
Trigger: GTCAATCCGAGTAAGAACCTGCTCCAGCAGCCCCAAGCCAGCACGTTCATCTCTGGCTTGGAGCCACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TTGCTCTGGCGGCAGCTGTGCTGTGTGCAAGATGACTaGGGAGCTGTTTGTGCACCCTGCTTGTGTGCATGC +
Preference number: 6 (lower is better)
Translates to: LLWRQLCCVQDD*GAVCAPCLCAC
Trigger: GCATGCACACAAGCAGGGTGCACAAACAGCTCCCAAGTCATCTTGCACACAGCACAGCTGCCGCCAGAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp AGGGTCTTGTGGTCACTTCTACCCAAGCACTGCTGTTaGTGCCCCCATCAAGAGTGCTCCCCAGAACCCGGT +
Preference number: 6 (lower is better)
Translates to: RVLWSLLPKHCC*CPHQECSPEPG
Trigger: ACCGGGTTCTGGGGAGCACTCTTGATGGGGGCACAAACAGCAGTGCTTGGGTAGAAGTGACCACAAGACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GTGGGGCAGGTCCAGTTCTGCACCGTGTCCAGTTACTaGCAGCTTTGCCTGCAGAATTCACCGCCCATACCT +
Preference number: 6 (lower is better)
Translates to: VGQVQFCTVSSY*QLCLQNSPPIP
Trigger: AGGTATGGGCGGTGAATTCTGCAGGCAAAGCTGCAAGTAACTGGACACGGTGCAGAACTGGACCTGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp AGCTCTGGGAGTAGGCGTGGCTCAGTTGGCTTTGACTaGGGATCCGCAGTACAGACACACTTTGGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SSGSRRGSVGFD*GSAVQTHFGCS
Trigger: GGAGCAGCCAAAGTGTGTCTGTACTGCGGATCCCAAGTCAAAGCCAACTGAGCCACGCCTACTCCCAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS CAA 90 bp AAGGCCGACAGGGTCTTGTGGTCACTTCTACCCAAGCACTGCTGTTaGTGCCCCCATCAAGAGTGCTCCCCAGAACCCGGTATTCATAGC +
Preference number: 6 (lower is better)
Translates to: KADRVLWSLLPKHCC*CPHQECSPEPGIHS
Trigger: GCTATGAATACCGGGTTCTGGGGAGCACTCTTGATGGGGGCACAAACAGCAGTGCTTGGGTAGAAGTGACCACAAGACCCTGTCGGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GGTGGGGCAGGTCCAGTTCTGCACCGTGTCCAGTTACTTGCAGCTTaGCCTGCAGAATTCACCGCCCATACCTGGTATTCGTATTCCGTG +
Preference number: 6 (lower is better)
Translates to: GGAGPVLHRVQLLAA*PAEFTAHTWYSYSV
Trigger: CACGGAATACGAATACCAGGTATGGGCGGTGAATTCTGCAGGCAAAGCTGCAAGTAACTGGACACGGTGCAGAACTGGACCTGCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GGTGGAGAGAGCTCTGGGAGTAGGCGTGGCTCAGTTGGCTTTGACTaGGGATCCGCAGTACAGACACACTTTGGCTGCTCCGAATACTCA +
Preference number: 6 (lower is better)
Translates to: GGESSGSRRGSVGFD*GSAVQTHFGCSEYS
Trigger: TGAGTATTCGGAGCAGCCAAAGTGTGTCTGTACTGCGGATCCCAAGTCAAAGCCAACTGAGCCACGCCTACTCCCAGAGCTCTCTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS TCA 72 bp AGCACCCACATTCTCCAGCCTTGGGAAAACGCCCTGTaGGGCAGCCAACACCAATACCGAAGCCAAATAGGC +
Preference number: 6 (lower is better)
Translates to: STHILQPWENAL*GSQHQYRSQIG
Trigger: GCCTATTTGGCTTCGGTATTGGTGTTGGCTGCCTCACAGGGCGTTTTCCCAAGGCTGGAGAATGTGGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp CAGTGGTTGAGGGGTCATGGCAAGAGCACTGTCCCGTaGCACTATTACAGATGTGGCTCACAGCACCAGCTG +
Preference number: 6 (lower is better)
Translates to: QWLRGHGKSTVP*HYYRCGSQHQL
Trigger: CAGCTGGTGCTGTGAGCCACATCTGTAATAGTGTCACGGGACAGTGCTCTTGCCATGACCCCTCAACCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp CCGACTCCAATCACTGGACACCGCTCCTCCTTCGTGTaGGGCTGTGACCCGATACAGGTATTCTGTAAAGGG +
Preference number: 6 (lower is better)
Translates to: PTPITGHRSSFV*GCDPIQVFCKG
Trigger: CCCTTTACAGAATACCTGTATCGGGTCACAGCCTCACACGAAGGAGGAGCGGTGTCCAGTGATTGGAGTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GTAGCTGTGGAAGGGATGAAGTCCTATCAACACGCCTaGGTGGGTGCTGGTGTCATGAAGCTCAGTGCTGGC +
Preference number: 6 (lower is better)
Translates to: VAVEGMKSYQHA*VGAGVMKLSAG
Trigger: GCCAGCACTGAGCTTCATGACACCAGCACCCACTCAGGCGTGTTGATAGGACTTCATCCCTTCCACAGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp AACACAGTCCTTCCACCGCTTTCTTCCCTGTGGGATTaGGAGGCCCTCTCATCACCGTGCAGATATGGGTGG +
Preference number: 6 (lower is better)
Translates to: NTVLPPLSSLWD*EALSSPCRYGW
Trigger: CCACCCATATCTGCACGGTGATGAGAGGGCCTCTCAATCCCACAGGGAAGAAAGCGGTGGAAGGACTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp CCGTATGCTGCCTCCTGTCACTTGTGTCGGTGTAGATaGGCCCTTTCCCATCCAGCCAGAGCTGGTATGCTT +
Preference number: 6 (lower is better)
Translates to: PYAASCHLCRCR*ALSHPARAGML
Trigger: AAGCATACCAGCTCTGGCTGGATGGGAAAGGGCTCATCTACACCGACACAAGTGACAGGAGGCAGCATACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp CCAGTCCACCCACACCATGGATGCGTTGCTGTCCACTaGGAACAGGGCTTGGTACTGAGGCATCTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: PVHPHHGCVAVH*EQGLVLRHLLL
Trigger: AAGAAGGAGATGCCTCAGTACCAAGCCCTGTTCTCAGTGGACAGCAACGCATCCATGGTGTGGGTGGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp AGGCTGGCCTCCAGCCTGGGAGGTGCTCTTCTTAAGTaGATTCACACGGACAGATACCACAGAGCCTTCCTT +
Preference number: 6 (lower is better)
Translates to: RLASSLGGALLK*IHTDRYHRAFL
Trigger: AAGGAAGGCTCTGTGGTATCTGTCCGTGTGAATGCACTTAAGAAGAGCACCTCCCAGGCTGGAGGCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TTCCTACCAGTGGGCCCAGAGCACAACCCTTTGCCGTaGATGCTTGAACTTGGAAGGTGTGTAAGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: FLPVGPEHNPLP*MLELGRCVSSQ
Trigger: CTGGGAGCTTACACACCTTCCAAGTTCAAGCATGCACGGCAAAGGGTTGTGCTCTGGGCCCACTGGTAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CTACCCAAGCACTGCTGTTTGTGCCCCCATCAAGAGTaGTCCCCAGAACCCGGTATTCATAGCGTGTCCAAG +
Preference number: 6 (lower is better)
Translates to: LPKHCCLCPHQE*SPEPGIHSVSK
Trigger: CTTGGACACGCTATGAATACCGGGTTCTGGGGAGCACTCTTGATGGGGGCACAAACAGCAGTGCTTGGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CCCTCCACAGCAAACCCCAGTGGCATTCGGAGAGAGTaGGATGTATTTGTCCTCACAGCAGCTGTATCCAGG +
Preference number: 6 (lower is better)
Translates to: PSTANPSGIRRE*DVFVLTAAVSR
Trigger: CCTGGATACAGCTGCTGTGAGGACAAATACATCGCACTCTCTCCGAATGCCACTGGGGTTTGCTGTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CATCACAGCATCGCTGGCTCTCTGGACTCAGTTCAGTaGCGCAGCATTTCACTGGTGTGGGGTCATCCTTTC +
Preference number: 6 (lower is better)
Translates to: HHSIAGSLDSVQ*RSISLVWGHPF
Trigger: GAAAGGATGACCCCACACCAGTGAAATGCTGCGGCACTGAACTGAGTCCAGAGAGCCAGCGATGCTGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CGTCACCGTGAAAGCATGCACGGTAGAACTGCCGGGTaGTGCCGCATCTGGTCTTTCTTGGTAGATCACATG +
Preference number: 6 (lower is better)
Translates to: RHRESMHGRTAG*CRIWSFLVDHM
Trigger: CATGTGATCTACCAAGAAAGACCAGATGCGGCAGCACCCGGCAGTTCTACCGTGCATGCTTTCACGGTGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TTGATCACTCCATTGGTCTTCACTGGCTCTGACCACTaGAGCAGCAAAGCCCGGCCCTTTTCTCTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: LITPLVFTGSDH*SSKARPFSLCS
Trigger: GGAGCAGAGAGAAAAGGGCCGGGCTTTGCTGCTGCAGTGGTCAGAGCCAGTGAAGACCAATGGAGTGATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CCACGTACTCCTTTAGATGGCCGTTCAGGAGAAAAGTaGCACTCCAGTCCACCCACACCATGGATGCGTTGC +
Preference number: 6 (lower is better)
Translates to: PRTPLDGRSGEK*HSSPPTPWMRC
Trigger: GCAACGCATCCATGGTGTGGGTGGACTGGAGTGGCACTTTTCTCCTGAACGGCCATCTAAAGGAGTACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GTCCCACGAAGCGGGTTCCCTTTGTCACAGCAGCTGTaGCAGCTGGGAGGGAAGACTTCTTCCTTTCTAGAT +
Preference number: 6 (lower is better)
Translates to: VPRSGFPLSQQL*QLGGKTSSFLD
Trigger: ATCTAGAAAGGAAGAAGTCTTCCCTCCCAGCTGCCACAGCTGCTGTGACAAAGGGAACCCGCTTCGTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp ACAGGAGAATTCACCAGCAGAGGCTGGCCTCCAGCCTaGGAGGTGCTCTTCTTAAGTGCATTCACACGGACA +
Preference number: 6 (lower is better)
Translates to: TGEFTSRGWPPA*EVLFLSAFTRT
Trigger: TGTCCGTGTGAATGCACTTAAGAAGAGCACCTCCCAGGCTGGAGGCCAGCCTCTGCTGGTGAATTCTCCTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CTGTATACCATGCCCTCTTCTCCTCCACCACAGCACTaGAAATCTTGGCTCACCATCTCTCCCCCACAGCAC +
Preference number: 6 (lower is better)
Translates to: LYTMPSSPPPQH*KSWLTISPPQH
Trigger: GTGCTGTGGGGGAGAGATGGTGAGCCAAGATTTCCAGTGCTGTGGTGGAGGAGAAGAGGGCATGGTATACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CCAGGGCTGACTCCACAGCCCCCATTTTGGCAGGCTTaGATCCGTATTTCATACTGTGTGAACGGAGACAGG +
Preference number: 6 (lower is better)
Translates to: PGLTPQPPFWQA*IRISYCVNGDR
Trigger: CCTGTCTCCGTTCACACAGTATGAAATACGGATCCAAGCCTGCCAAAATGGGGGCTGTGGAGTCAGCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TCTGTAGCCCTGGATGACACCGTTAGAGTGTCGGGGTaGAAGCCAGGAAATCAGCAGTTGGAGGGGACTCAT +
Preference number: 6 (lower is better)
Translates to: SVALDDTVRVSG*KPGNQQLEGTH
Trigger: ATGAGTCCCCTCCAACTGCTGATTTCCTGGCTTCCACCCCGACACTCTAACGGTGTCATCCAGGGCTACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TGTGATGTGCAGTGTTGGTGGGTCCATGTTCTCTGGTaGAGCCTCCTTTGTCCAGGCGGATGTGGTCCTACT +
Preference number: 6 (lower is better)
Translates to: CDVQCWWVHVLW*SLLCPGGCGPT
Trigger: AGTAGGACCACATCCGCCTGGACAAAGGAGGCTCCACCAGAGAACATGGACCCACCAACACTGCACATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TCAGGAGAAAAGTGCCACTCCAGTCCACCCACACCATaGATGCGTTGCTGTCCACTGAGAACAGGGCTTGGT +
Preference number: 6 (lower is better)
Translates to: SGEKCHSSPPTP*MRCCPLRTGLG
Trigger: ACCAAGCCCTGTTCTCAGTGGACAGCAACGCATCCATGGTGTGGGTGGACTGGAGTGGCACTTTTCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TCCGGTTTCCTACCAGTGGGCCCAGAGCACAACCCTTaGCCGTGCATGCTTGAACTTGGAAGGTGTGTAAGC +
Preference number: 6 (lower is better)
Translates to: SGFLPVGPEHNP*PCMLELGRCVS
Trigger: GCTTACACACCTTCCAAGTTCAAGCATGCACGGCAAAGGGTTGTGCTCTGGGCCCACTGGTAGGAAACCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CCCAGGGCTGACTCCACAGCCCCCATTTTGGCAGGCTaGGATCCGTATTTCATACTGTGTGAACGGAGACAG +
Preference number: 6 (lower is better)
Translates to: PRADSTAPILAG*DPYFILCERRQ
Trigger: CTGTCTCCGTTCACACAGTATGAAATACGGATCCAAGCCTGCCAAAATGGGGGCTGTGGAGTCAGCCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CTGACTTCTGATGGAGGTACCTCAGGAGTGGTGATGTaGGTGGGTTCACTGGTACAGCAGCCACCACCTGTG +
Preference number: 6 (lower is better)
Translates to: LTSDGGTSGVVM*VGSLVQQPPPV
Trigger: CACAGGTGGTGGCTGCTGTACCAGTGAACCCACCAACATCACCACTCCTGAGGTACCTCCATCAGAAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GAGAGAGCTCTGGGAGTAGGCGTGGCTCAGTTGGCTTaGACTTGGGATCCGCAGTACAGACACACTTTGGCT +
Preference number: 6 (lower is better)
Translates to: ERALGVGVAQLA*TWDPQYRHTLA
Trigger: AGCCAAAGTGTGTCTGTACTGCGGATCCCAAGTCAAAGCCAACTGAGCCACGCCTACTCCCAGAGCTCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS CAA 90 bp CTTCTAGAGTCCGGTTTCCTACCAGTGGGCCCAGAGCACAACCCTTaGCCGTGCATGCTTGAACTTGGAAGGTGTGTAAGCTCCCAGGAT +
Preference number: 6 (lower is better)
Translates to: LLESGFLPVGPEHNP*PCMLELGRCVSSQD
Trigger: ATCCTGGGAGCTTACACACCTTCCAAGTTCAAGCATGCACGGCAAAGGGTTGTGCTCTGGGCCCACTGGTAGGAAACCGGACTCTAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp ACTGTATACCATGCCCTCTTCTCCTCCACCACAGCACTGGAAATCTaGGCTCACCATCTCTCCCCCACAGCACTGCTGTCTATAGCCGTC +
Preference number: 6 (lower is better)
Translates to: TVYHALFSSTTALEI*AHHLSPTALLSIAV
Trigger: GACGGCTATAGACAGCAGTGCTGTGGGGGAGAGATGGTGAGCCAAGATTTCCAGTGCTGTGGTGGAGGAGAAGAGGGCATGGTATACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GTGTCGGTAAAGGCGGTGTGCTCCTTGGTCACGGAGCTGAAACCCTaGATGGCGTTCATGAGCTCTTCTTCGTCCACATACAGTCCACTG +
Preference number: 6 (lower is better)
Translates to: VSVKAVCSLVTELKP*MAFMSSSSSTYSPL
Trigger: CAGTGGACTGTATGTGGACGAAGAAGAGCTCATGAACGCCATCAAGGGTTTCAGCTCCGTGACCAAGGAGCACACCGCCTTTACCGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS TCA 72 bp ACACTGCCCAGAAAGCGGATCACAGAGTTGGTTCACTaGGCCGTGGAGGTTACATTGGCAAGGCTCACATCC +
Preference number: 6 (lower is better)
Translates to: TLPRKRITELVH*AVEVTLARLTS
Trigger: GGATGTGAGCCTTGCCAATGTAACCTCCACGGCTCAGTGAACCAACTCTGTGATCCGCTTTCTGGGCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp AGTGTGGTGAGAGTGGAGAGACTGAAGGAGGGGCCATaGATACGGGTACTGATTCCCCCGTTCTTTCTGAGG +
Preference number: 6 (lower is better)
Translates to: SVVRVERLKEGP*IRVLIPPFFLR
Trigger: CCTCAGAAAGAACGGGGGAATCAGTACCCGTATTCATGGCCCCTCCTTCAGTCTCTCCACTCTCACCACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp TCTTCTAGGTTGGTGGGACAACCTTCCCAGCTGGGATaGACATTCACCTGCTCCTCAGAGCTCTGCCAATCC +
Preference number: 6 (lower is better)
Translates to: SSRLVGQPSQLG*TFTCSSELCQS
Trigger: GGATTGGCAGAGCTCTGAGGAGCAGGTGAATGTTCATCCCAGCTGGGAAGGTTGTCCCACCAACCTAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp ATTTCCTGGGAGTGTCCACACAGTCTCAGACGATGGTaGCTTAGAGCACCCTTGGGAGGTGCAGGCTTCTAC +
Preference number: 6 (lower is better)
Translates to: ISWECPHSLRRW*LRAPLGGAGFY
Trigger: GTAGAAGCCTGCACCTCCCAAGGGTGCTCTAAGTCACCATCGTCTGAGACTGTGTGGACACTCCCAGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp AGCACAACCAGCAGCTGTGCAAGCCTTCAGCTGGTATaGGTATTCCTGGAGTGGCTGAATTCCCTGCGTGTC +
Preference number: 6 (lower is better)
Translates to: STTSSCASLQLV*VFLEWLNSLRV
Trigger: GACACGCAGGGAATTCAGCCACTCCAGGAATACTCATACCAGCTGAAGGCTTGCACAGCTGCTGGTTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GTATGCCTTGATCACTCCATTGGTCTTCACTGGCTCTaGCCACTGCAGCAGCAAAGCCCGGCCCTTTTCTCT +
Preference number: 6 (lower is better)
Translates to: VCLDHSIGLHWL*PLQQQSPALFS
Trigger: AGAGAAAAGGGCCGGGCTTTGCTGCTGCAGTGGTCAGAGCCAGTGAAGACCAATGGAGTGATCAAGGCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp ACCACCTGTGCAGGCCAGGATGGCATAACTGTACGTTaGGAAGGGAAGCAGCTGGCTGTCCATGTAGCTGAA +
Preference number: 6 (lower is better)
Translates to: TTCAGQDGITVR*EGKQLAVHVAE
Trigger: TTCAGCTACATGGACAGCCAGCTGCTTCCCTTCTCAACGTACAGTTATGCCATCCTGGCCTGCACAGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GATGCGTTGCTGTCCACTGAGAACAGGGCTTGGTACTaGGGCATCTCCTTCTTGGTGCTGAAGTTGGTCCAC +
Preference number: 6 (lower is better)
Translates to: DALLSTENRAWY*GISFLVLKLVH
Trigger: GTGGACCAACTTCAGCACCAAGAAGGAGATGCCTCAGTACCAAGCCCTGTTCTCAGTGGACAGCAACGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CACAGATGCCAAGTTAACGACAACACCCCGTGCAAATaGAACTTCCTTCACGCAACCACGGAACCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: HRCQVNDNTPCK*NFLHATTEPWL
Trigger: GAGCCAGGGTTCCGTGGTTGCGTGAAGGAAGTTGCATTTGCACGGGGTGTTGTCGTTAACTTGGCATCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GCTGGACACAGATGCCAAGTTAACGACAACACCCCGTaGAAATGCAACTTCCTTCACGCAACCACGGAACCC +
Preference number: 6 (lower is better)
Translates to: AGHRCQVNDNTP*KCNFLHATTEP
Trigger: GGGTTCCGTGGTTGCGTGAAGGAAGTTGCATTTGCACGGGGTGTTGTCGTTAACTTGGCATCTGTGTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GTCTTGTGGTCACTTCTACCCAAGCACTGCTGTTTGTaGCCCCATCAAGAGTGCTCCCCAGAACCCGGTATT +
Preference number: 6 (lower is better)
Translates to: VLWSLLPKHCCL*PHQECSPEPGI
Trigger: AATACCGGGTTCTGGGGAGCACTCTTGATGGGGGCACAAACAGCAGTGCTTGGGTAGAAGTGACCACAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CACCGTGAAAGCATGCACGGTAGAACTGCCGGGTGCTaGCGCATCTGGTCTTTCTTGGTAGATCACATGGTA +
Preference number: 6 (lower is better)
Translates to: HRESMHGRTAGC*RIWSFLVDHMV
Trigger: TACCATGTGATCTACCAAGAAAGACCAGATGCGGCAGCACCCGGCAGTTCTACCGTGCATGCTTTCACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CTGGTCCTGTCACAGGTCTCAGCATGGCCGTGGCATTaGCATCTTCCACTGACAATGATCTCATCCACTGCA +
Preference number: 6 (lower is better)
Translates to: LVLSQVSAWPWH*HLPLTMISSTA
Trigger: TGCAGTGGATGAGATCATTGTCAGTGGAAGATGCCAATGCCACGGCCATGCTGAGACCTGTGACAGGACCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CTCTTACAATCACATTGGCCTCCAATCGGGTCACAGTaGAGGCTGCCATTTCTAGTCCCGGCCCTGTTACAG +
Preference number: 6 (lower is better)
Translates to: LLQSHWPPIGSQ*RLPFLVPALLQ
Trigger: CTGTAACAGGGCCGGGACTAGAAATGGCAGCCTCCACTGTGACCCGATTGGAGGCCAATGTGATTGTAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TTGCATGCACACTGCCCAGAAAGCGGATCACAGAGTTaGTTCACTGAGCCGTGGAGGTTACATTGGCAAGGC +
Preference number: 6 (lower is better)
Translates to: LHAHCPESGSQS*FTEPWRLHWQG
Trigger: GCCTTGCCAATGTAACCTCCACGGCTCAGTGAACCAACTCTGTGATCCGCTTTCTGGGCAGTGTGCATGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TGGCAAGAGCACTGTCCCGTGACACTATTACAGATGTaGCTCACAGCACCAGCTGTGTGGCATAAGCATGGC +
Preference number: 6 (lower is better)
Translates to: WQEHCPVTLLQM*LTAPAVWHKHG
Trigger: GCCATGCTTATGCCACACAGCTGGTGCTGTGAGCCACATCTGTAATAGTGTCACGGGACAGTGCTCTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CAGAAGGAATGGGGAATAATTCTAGACGGCCATGAGTaGAGGGACCAGGCCTCATCTGGAGCTGGTATCTGG +
Preference number: 6 (lower is better)
Translates to: QKEWGIILDGHE*RDQASSGAGIW
Trigger: CCAGATACCAGCTCCAGATGAGGCCTGGTCCCTCCACTCATGGCCGTCTAGAATTATTCCCCATTCCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp AGCATGCACGGTAGAACTGCCGGGTGCTGCCGCATCTaGTCTTTCTTGGTAGATCACATGGTACTGGGAGAT +
Preference number: 6 (lower is better)
Translates to: SMHGRTAGCCRI*SFLVDHMVLGD
Trigger: ATCTCCCAGTACCATGTGATCTACCAAGAAAGACCAGATGCGGCAGCACCCGGCAGTTCTACCGTGCATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TTTGGGATTGATGGCGGGGACCAAGACACATTCATCTaGTGGGCACTGATGTCCCAAAGAACTGGAGGGCTG +
Preference number: 6 (lower is better)
Translates to: FGIDGGDQDTFI*WALMSQRTGGL
Trigger: CAGCCCTCCAGTTCTTTGGGACATCAGTGCCCACCAGATGAATGTGTCTTGGTCCCCGCCATCAATCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp AGGAGCGGAAGCTGCCGTTGTAGATTAGCAGTGAACTaGATGTGCCAGGCCAGGCTGCTACTTGTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: RSGSCRCRLAVN*MCQARLLLVFC
Trigger: ACAGAAGACAAGTAGCAGCCTGGCCTGGCACATCCAGTTCACTGCTAATCTACAACGGCAGCTTCCGCTCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp AAACACATGGGTTTCCCCTGGTGGGTAGACGCTCAGTaGGGTCATTCGTTTCTGAAGAGGTACCAAGGGAGG +
Preference number: 6 (lower is better)
Translates to: KHMGFPWWVDAQ*GHSFLKRYQGR
Trigger: CCTCCCTTGGTACCTCTTCAGAAACGAATGACCCCACTGAGCGTCTACCCACCAGGGGAAACCCATGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000127077.2
CDS CAA 72 bp TCTGGTCCTGTCACAGGTCTCAGCATGGCCGTGGCATaGGCATCTTCCACTGACAATGATCTCATCCACTGC +
Preference number: 6 (lower is better)
Translates to: SGPVTGLSMAVA*ASSTDNDLIHC
Trigger: GCAGTGGATGAGATCATTGTCAGTGGAAGATGCCAATGCCACGGCCATGCTGAGACCTGTGACAGGACCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TCTTCATGTTTGCCCGTCCTGGCCCATCTAGGGGCCTaGACTCCTTCAGGCACATCTTCTCTTGTGCTAGCT +
Preference number: 6 (lower is better)
Translates to: SSCLPVLAHLGA*TPSGTSSLVLA
Trigger: AGCTAGCACAAGAGAAGATGTGCCTGAAGGAGTCAAGGCCCCTAGATGGGCCAGGACGGGCAAACATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp ATTGATGATAATGTGTCGCGGTGTCACCCAAACTCCTaGAGGGGCAGCCTGCAGAGTCTGACCTACACAGGG +
Preference number: 6 (lower is better)
Translates to: IDDNVSRCHPNS*RGSLQSLTYTG
Trigger: CCCTGTGTAGGTCAGACTCTGCAGGCTGCCCCTCAAGGAGTTTGGGTGACACCGCGACACATTATCATCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GGTAGAACTGCCGGGTGCTGCCGCATCTGGTCTTTCTaGGTAGATCACATGGTACTGGGAGATGAGGCCATT +
Preference number: 6 (lower is better)
Translates to: GRTAGCCRIWSF*VDHMVLGDEAI
Trigger: AATGGCCTCATCTCCCAGTACCATGTGATCTACCAAGAAAGACCAGATGCGGCAGCACCCGGCAGTTCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GGTCCAGTTCTGCACCGTGTCCAGTTACTTGCAGCTTaGCCTGCAGAATTCACCGCCCATACCTGGTATTCG +
Preference number: 6 (lower is better)
Translates to: GPVLHRVQLLAA*PAEFTAHTWYS
Trigger: CGAATACCAGGTATGGGCGGTGAATTCTGCAGGCAAAGCTGCAAGTAACTGGACACGGTGCAGAACTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp AAGGCGGTGTGCTCCTTGGTCACGGAGCTGAAACCCTaGATGGCGTTCATGAGCTCTTCTTCGTCCACATAC +
Preference number: 6 (lower is better)
Translates to: KAVCSLVTELKP*MAFMSSSSSTY
Trigger: GTATGTGGACGAAGAAGAGCTCATGAACGCCATCAAGGGTTTCAGCTCCGTGACCAAGGAGCACACCGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS CAA 90 bp CGCAGACCAGTTACCCCTAGTTTGCAAGGACACTGCCCGGTTGACTaGTCACACCTTAGAGAGCCATTTACCGTTCCCATCTTCTCGCAG +
Preference number: 6 (lower is better)
Translates to: RRPVTPSLQGHCPVD*SHLREPFTVPIFSQ
Trigger: CTGCGAGAAGATGGGAACGGTAAATGGCTCTCTAAGGTGTGACAAGTCAACCGGGCAGTGTCCTTGCAAACTAGGGGTAACTGGTCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp CCCAGCCTGAGATCCACGCGTGTAAAGACGAGACTGGAATTGAACTaGAAGCTCAGCAGCCCTCTCTTCAGCTCCACCGCAAGAAAATCC +
Preference number: 6 (lower is better)
Translates to: PSLRSTRVKTRLELN*KLSSPLFSSTARKS
Trigger: GGATTTTCTTGCGGTGGAGCTGAAGAGAGGGCTGCTGAGCTTCAAGTTCAATTCCAGTCTCGTCTTTACACGCGTGGATCTCAGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GGTTGTAGAATTGATGATAATGTGTCGCGGTGTCACCCAAACTCCTaGAGGGGCAGCCTGCAGAGTCTGACCTACACAGGGCTCACTGGA +
Preference number: 6 (lower is better)
Translates to: GCRIDDNVSRCHPNS*RGSLQSLTYTGLTG
Trigger: TCCAGTGAGCCCTGTGTAGGTCAGACTCTGCAGGCTGCCCCTCAAGGAGTTTGGGTGACACCGCGACACATTATCATCAATTCTACAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp AAGCGTTCTGACGTATGTCCCAGGGCTGACTCCACAGCCCCCATTTaGGCAGGCTTGGATCCGTATTTCATACTGTGTGAACGGAGACAG +
Preference number: 6 (lower is better)
Translates to: KRSDVCPRADSTAPI*AGLDPYFILCERRQ
Trigger: CTGTCTCCGTTCACACAGTATGAAATACGGATCCAAGCCTGCCAAAATGGGGGCTGTGGAGTCAGCCCTGGGACATACGTCAGAACGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp CCTCCACGGCTGCAGACCCGTGTCATTATACACCCATGCATTCCCTaGCGTGTTGTATTCTGTGAAAACAGTGTTCCCGTCTGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: PPRLQTRVIIHPCIP*RVVFCENSVPVCLP
Trigger: TGGCAGGCAGACGGGAACACTGTTTTCACAGAATACAACACGCAAGGGAATGCATGGGTGTATAATGACACGGGTCTGCAGCCGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp AGACACATAGGATATCTCTGGTGGAGAGAGGCCATCTGGGGGTGCTaGCAATGTTCTCACCACATTCCAAGAGCTACAGGTGTGCCCTGC +
Preference number: 6 (lower is better)
Translates to: RHIGYLWWREAIWGC*QCSHHIPRATGVPC
Trigger: GCAGGGCACACCTGTAGCTCTTGGAATGTGGTGAGAACATTGCAAGCACCCCCAGATGGCCTCTCTCCACCAGAGATATCCTATGTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GTGGCTCAGTTGGCTTTGACTTGGGATCCGCAGTACAGACACACTTaGGCTGCTCCGAATACTCATAGGTGTCCCAGACCTAGGGAGTCT +
Preference number: 6 (lower is better)
Translates to: VAQLALTWDPQYRHT*AAPNTHRCPRPRES
Trigger: AGACTCCCTAGGTCTGGGACACCTATGAGTATTCGGAGCAGCCAAAGTGTGTCTGTACTGCGGATCCCAAGTCAAAGCCAACTGAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS TCA 72 bp ACATTCGCTTTGCACGAGCACTGGCCTGAATTTTGGTaGCAGGTAATGTCTCCATCCACGGTCCCAGAGGGA +
Preference number: 6 (lower is better)
Translates to: TFALHEHWPEFW*QVMSPSTVPEG
Trigger: TCCCTCTGGGACCGTGGATGGAGACATTACCTGTCACCAAAATTCAGGCCAGTGCTCGTGCAAAGCGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp ACGCCTGACAACCTTGAGGATTGTCCATCGTCAAATTaGACCTGTGAGGCTTGCACTGGTGGCAACGCAGAC +
Preference number: 6 (lower is better)
Translates to: TPDNLEDCPSSN*TCEACTGGNAD
Trigger: GTCTGCGTTGCCACCAGTGCAAGCCTCACAGGTTCAATTTGACGATGGACAATCCTCAAGGTTGTCAGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp TCAGAGCCATTCCTGAACAGAGTGTATGTAAGCCAGTaGGCATTTGGGCACTCGGGTGGACTCCAGGACACA +
Preference number: 6 (lower is better)
Translates to: SEPFLNRVYVSQ*AFGHSGGLQDT
Trigger: TGTGTCCTGGAGTCCACCCGAGTGCCCAAATGCTCACTGGCTTACATACACTCTGTTCAGGAATGGCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp AGTGGGCCCAGAGCACAACCCTTTGCCGTGCATGCTTaGACTTGGAAGGTGTGTAAGCTCCCAGGATCAAAT +
Preference number: 6 (lower is better)
Translates to: SGPRAQPFAVHA*TWKVCKLPGSN
Trigger: ATTTGATCCTGGGAGCTTACACACCTTCCAAGTTCAAGCATGCACGGCAAAGGGTTGTGCTCTGGGCCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GATGCAGAAGGAATGGGGAATAATTCTAGACGGCCATaGGTGGAGGGACCAGGCCTCATCTGGAGCTGGTAT +
Preference number: 6 (lower is better)
Translates to: DAEGMGNNSRRP*VEGPGLIWSWY
Trigger: ATACCAGCTCCAGATGAGGCCTGGTCCCTCCACTCATGGCCGTCTAGAATTATTCCCCATTCCTTCTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GAATCAGAGCCCAGCACAGTGACATTACATGGGGGATaGATGTCTTCTGGGGTCCACAGAGGCATCTGGACA +
Preference number: 6 (lower is better)
Translates to: ESEPSTVTLHGG*MSSGVHRGIWT
Trigger: TGTCCAGATGCCTCTGTGGACCCCAGAAGACATTCATCCCCCATGTAATGTCACTGTGCTGGGCTCTGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp CTGGTCTTTCTTGGTAGATCACATGGTACTGGGAGATaGGGCCATTGGGGGCCTCTGGCTCTGTCCAGTTTA +
Preference number: 6 (lower is better)
Translates to: LVFLGRSHGTGR*GHWGPLALSSL
Trigger: TAAACTGGACAGAGCCAGAGGCCCCCAATGGCCTCATCTCCCAGTACCATGTGATCTACCAAGAAAGACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GCCTGTGACTGCATCACAAGTTCCATTCGAGGCTCCTaGTACATGACAGTGACAAGGCCTGCATCTTCCAGT +
Preference number: 6 (lower is better)
Translates to: ACDCITSSIRGS*YMTVTRPASSS
Trigger: ACTGGAAGATGCAGGCCTTGTCACTGTCATGTAGCAGGAGCCTCGAATGGAACTTGTGATGCAGTCACAGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GTGTTGTATTCTGTGAAAACAGTGTTCCCGTCTGCCTaGCATGTTGTGTTCCCCCAGTCCTCTTCCTCCGAG +
Preference number: 6 (lower is better)
Translates to: VLYSVKTVFPSA*HVVFPQSSSSE
Trigger: CTCGGAGGAAGAGGACTGGGGGAACACAACATGGCAGGCAGACGGGAACACTGTTTTCACAGAATACAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GTCCAGTTCTGCACCGTGTCCAGTTACTTGCAGCTTTaGCTGCAGAATTCACCGCCCATACCTGGTATTCGT +
Preference number: 6 (lower is better)
Translates to: VQFCTVSSYLQL*LQNSPPIPGIR
Trigger: ACGAATACCAGGTATGGGCGGTGAATTCTGCAGGCAAAGCTGCAAGTAACTGGACACGGTGCAGAACTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CCAGAAAGCGGATCACAGAGTTGGTTCACTGAGCCGTaGAGGTTACATTGGCAAGGCTCACATCCATCACCA +
Preference number: 6 (lower is better)
Translates to: PESGSQSWFTEP*RLHWQGSHPSP
Trigger: TGGTGATGGATGTGAGCCTTGCCAATGTAACCTCCACGGCTCAGTGAACCAACTCTGTGATCCGCTTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GGTCCATTGACTCCTGCAGGAGGAAGCCACCTGATATaGACTGTAGTACTGTTGACTCCTGTCACCATGGGA +
Preference number: 6 (lower is better)
Translates to: GPLTPAGGSHLI*TVVLLTPVTMG
Trigger: TCCCATGGTGACAGGAGTCAACAGTACTACAGTCCATATCAGGTGGCTTCCTCCTGCAGGAGTCAATGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp AGTGTATGGGAACAACTGTGGGCTTGGGATGCCTTCTaGATTTCCTGGGAGTGTCCACACAGTCTCAGACGA +
Preference number: 6 (lower is better)
Translates to: SVWEQLWAWDAF*ISWECPHSLRR
Trigger: TCGTCTGAGACTGTGTGGACACTCCCAGGAAATCCAGAAGGCATCCCAAGCCCACAGTTGTTCCCATACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CAGTTGGAGGGGACTCATAGACACATAGGATATCTCTaGTGGAGAGAGGCCATCTGGGGGTGCTTGCAATGT +
Preference number: 6 (lower is better)
Translates to: QLEGTHRHIGYL*WREAIWGCLQC
Trigger: ACATTGCAAGCACCCCCAGATGGCCTCTCTCCACCAGAGATATCCTATGTGTCTATGAGTCCCCTCCAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CTGCTGGCATGGCCATGGCACTGGCAAGGCTTACAGTaGAATGCATTAACATTGTCACCACTGCGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: LLAWPWHWQGLQ*NALTLSPLRKG
Trigger: GCCTTTCCGCAGTGGTGACAATGTTAATGCATTCAACTGTAAGCCTTGCCAGTGCCATGGCCATGCCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp AGATCCACGCGTGTAAAGACGAGACTGGAATTGAACTaGAAGCTCAGCAGCCCTCTCTTCAGCTCCACCGCA +
Preference number: 6 (lower is better)
Translates to: RSTRVKTRLELN*KLSSPLFSSTA
Trigger: TGCGGTGGAGCTGAAGAGAGGGCTGCTGAGCTTCAAGTTCAATTCCAGTCTCGTCTTTACACGCGTGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp AGCCTGAGATCCACGCGTGTAAAGACGAGACTGGAATaGAACTTGAAGCTCAGCAGCCCTCTCTTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SLRSTRVKTRLE*NLKLSSPLFSS
Trigger: GGAGCTGAAGAGAGGGCTGCTGAGCTTCAAGTTCAATTCCAGTCTCGTCTTTACACGCGTGGATCTCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp AGAGTAGCACGTGTGCCCACAGACTTTTCCAGGGTATaGGCACTTGACTGCTTTGCAAAGCTCATCACGCGG +
Preference number: 6 (lower is better)
Translates to: RVARVPTDFSRV*ALDCFAKLITR
Trigger: CCGCGTGATGAGCTTTGCAAAGCAGTCAAGTGCCAATACCCTGGAAAAGTCTGTGGGCACACGTGCTACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TTCAGGCACATCTTCTCTTGTGCTAGCTCTCACGGATaGGCTGAATCCTCGCCCGTAGCTGTTCCATGCAGA +
Preference number: 6 (lower is better)
Translates to: FRHIFSCASSHG*AESSPVAVPCR
Trigger: TCTGCATGGAACAGCTACGGGCGAGGATTCAGCCAATCCGTGAGAGCTAGCACAAGAGAAGATGTGCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CCGCCACTGAGTAAGATGCTGTACTCGACTGGAATTTaGGGAAGCAGGTTCCCTGGTGTTGGCCATGCTACA +
Preference number: 6 (lower is better)
Translates to: PPLSKMLYSTGI*GSRFPGVGHAT
Trigger: TGTAGCATGGCCAACACCAGGGAACCTGCTTCCCAAAATTCCAGTCGAGTACAGCATCTTACTCAGTGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GACGTATGTCCCAGGGCTGACTCCACAGCCCCCATTTaGGCAGGCTTGGATCCGTATTTCATACTGTGTGAA +
Preference number: 6 (lower is better)
Translates to: DVCPRADSTAPI*AGLDPYFILCE
Trigger: TTCACACAGTATGAAATACGGATCCAAGCCTGCCAAAATGGGGGCTGTGGAGTCAGCCCTGGGACATACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GTAAGGCCGTCTGGTCCTGTCACAGGTCTCAGCATGGCCGTGGCATaGGCATCTTCCACTGACAATGATCTCATCCACTGCATAGTATTG +
Preference number: 6 (lower is better)
Translates to: VRPSGPVTGLSMAVA*ASSTDNDLIHCIVL
Trigger: CAATACTATGCAGTGGATGAGATCATTGTCAGTGGAAGATGCCAATGCCACGGCCATGCTGAGACCTGTGACAGGACCAGACGGCCTTAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GGCAACGCAGACCAGTTACCCCTAGTTTGCAAGGACACTGCCCGGTaGACTTGTCACACCTTAGAGAGCCATTTACCGTTCCCATCTTCT +
Preference number: 6 (lower is better)
Translates to: GNADQLPLVCKDTAR*TCHTLESHLPFPSS
Trigger: AGAAGATGGGAACGGTAAATGGCTCTCTAAGGTGTGACAAGTCAACCGGGCAGTGTCCTTGCAAACTAGGGGTAACTGGTCTGCGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GTAGTCATGAGCGGAGTCCAAGCACTGTATGCAGTGCCAAAGCCATaGGTGGCAACCAACCGAAACTCATACACTGTGAACGGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: VVMSGVQALYAVPKP*VATNRNSYTVNGWR
Trigger: TCTCCAGCCGTTCACAGTGTATGAGTTTCGGTTGGTTGCCACCAATGGCTTTGGCACTGCATACAGTGCTTGGACTCCGCTCATGACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GATGACACCGTTAGAGTGTCGGGGTGGAAGCCAGGAAATCAGCAGTaGGAGGGGACTCATAGACACATAGGATATCTCTGGTGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: DDTVRVSGWKPGNQQ*EGTHRHIGYLWWRE
Trigger: CTCTCTCCACCAGAGATATCCTATGTGTCTATGAGTCCCCTCCAACTGCTGATTTCCTGGCTTCCACCCCGACACTCTAACGGTGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GAAGGTGCTGGCATTGAAATTGAGAGCAGGAAGCACTCCATCTCTTaGAAGTCTGTAGCCCTGGATGACACCGTTAGAGTGTCGGGGTGG +
Preference number: 6 (lower is better)
Translates to: EGAGIEIESRKHSIS*KSVALDDTVRVSGW
Trigger: CCACCCCGACACTCTAACGGTGTCATCCAGGGCTACAGACTTCAAAGAGATGGAGTGCTTCCTGCTCTCAATTTCAATGCCAGCACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp TGGCCCATAATAGTTTCCCACAGTGAGTCTTCCGTAACAACCTTCTaGTCTGCCATGTCCATGAGCTGGCTGACACTGCGGTGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: WPIIVSHSESSVTTF*SAMSMSWLTLRWRE
Trigger: CTCTCTCCACCGCAGTGTCAGCCAGCTCATGGACATGGCAGACAAGAAGGTTGTTACGGAAGACTCACTGTGGGAAACTATTATGGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS CAA 90 bp AGTTCCTGGAGAGTAGCACGTGTGCCCACAGACTTTTCCAGGGTATaGGCACTTGACTGCTTTGCAAAGCTCATCACGCGGTTTGTCTGT +
Preference number: 6 (lower is better)
Translates to: SSWRVARVPTDFSRV*ALDCFAKLITRFVC
Trigger: ACAGACAAACCGCGTGATGAGCTTTGCAAAGCAGTCAAGTGCCAATACCCTGGAAAAGTCTGTGGGCACACGTGCTACTCTCCAGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp AAGAGAAACTGCCGACCCAGGCCAGAGTACTCCAGGACCCCATCATaGAAGATGTTGTATGCCTTGATCACTCCATTGGTCTTCACTGGC +
Preference number: 6 (lower is better)
Translates to: KRNCRPRPEYSRTPS*KMLYALITPLVFTG
Trigger: GCCAGTGAAGACCAATGGAGTGATCAAGGCATACAACATCTTCAATGATGGGGTCCTGGAGTACTCTGGCCTGGGTCGGCAGTTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GGCTGCAGACCCGTGTCATTATACACCCATGCATTCCCTTGCGTGTaGTATTCTGTGAAAACAGTGTTCCCGTCTGCCTGCCATGTTGTG +
Preference number: 6 (lower is better)
Translates to: GCRPVSLYTHAFPCV*YSVKTVFPSACHVV
Trigger: CACAACATGGCAGGCAGACGGGAACACTGTTTTCACAGAATACAACACGCAAGGGAATGCATGGGTGTATAATGACACGGGTCTGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp TTCCTTGTCGATGAGGTAGACATAGACACTGGCCACTaGTGGGGTCACACATGCTTCCAGGTAATGTCCCCA +
Preference number: 6 (lower is better)
Translates to: FLVDEVDIDTGH*WGHTCFQVMSP
Trigger: TGGGGACATTACCTGGAAGCATGTGTGACCCCATCAGTGGCCAGTGTCTATGTCTACCTCATCGACAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp AAAGAAAGTAAGGACGGCCATTCTTCAACTGCAGGGTaGAATACTCTTCCTGGTCGCCAGGGGACAGTGCCA +
Preference number: 6 (lower is better)
Translates to: KESKDGHSSTAG*NTLPGRQGTVP
Trigger: TGGCACTGTCCCCTGGCGACCAGGAAGAGTATTTCACCCTGCAGTTGAAGAATGGCCGTCCTTACTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp CTTTGGATTATCTCAAGCCTCTTCTGGAGGACGCTATaGCCTTGTGGCACTCCACCCACAAACAGTCCAGTG +
Preference number: 6 (lower is better)
Translates to: LWIISSLFWRTL*PCGTPPTNSPV
Trigger: CACTGGACTGTTTGTGGGTGGAGTGCCACAAGGTCATAGCGTCCTCCAGAAGAGGCTTGAGATAATCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp AGCCATTGGTGGCAACCAACCGAAACTCATACACTGTaGACGGCTGGAGACCAGTCACTTCGTAGCTTAACG +
Preference number: 6 (lower is better)
Translates to: SHWWQPTETHTL*TAGDQSLRSLT
Trigger: CGTTAAGCTACGAAGTGACTGGTCTCCAGCCGTTCACAGTGTATGAGTTTCGGTTGGTTGCCACCAATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp ACGTGTGCCCACAGACTTTTCCAGGGTATTGGCACTTaGCTGCTTTGCAAAGCTCATCACGCGGTTTGTCTG +
Preference number: 6 (lower is better)
Translates to: TCAHRLFQGIGT*LLCKAHHAVCL
Trigger: CAGACAAACCGCGTGATGAGCTTTGCAAAGCAGTCAAGTGCCAATACCCTGGAAAAGTCTGTGGGCACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp TATGTTGTGAATGGTTCCAAGCCAAAGAGATGGGCTTaGCGACTCGTTCCCGTCACCGTGAAAGCATGCACG +
Preference number: 6 (lower is better)
Translates to: YVVNGSKPKRWA*RLVPVTVKACT
Trigger: CGTGCATGCTTTCACGGTGACGGGAACGAGTCGTCAAGCCCATCTCTTTGGCTTGGAACCATTCACAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GGTCATAGAATCCATCCTGGCACTGAAGGCACTGTCTaGCAGACACACGTCTCTTACAATCACATTGGCCTC +
Preference number: 6 (lower is better)
Translates to: GHRIHPGTEGTV*QTHVSYNHIGL
Trigger: GAGGCCAATGTGATTGTAAGAGACGTGTGTCTGGCAGACAGTGCCTTCAGTGCCAGGATGGATTCTATGACC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CAACGCAGACCAGTTACCCCTAGTTTGCAAGGACACTaGCCGGTTGACTTGTCACACCTTAGAGAGCCATTT +
Preference number: 6 (lower is better)
Translates to: QRRPVTPSLQGH*PVDLSHLREPF
Trigger: AAATGGCTCTCTAAGGTGTGACAAGTCAACCGGGCAGTGTCCTTGCAAACTAGGGGTAACTGGTCTGCGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp ATCCTGATTGACTCTGACAGCACGGCTGGACACAGATaGCAAGTTAACGACAACACCCCGTGCAAATGCAAC +
Preference number: 6 (lower is better)
Translates to: ILIDSDSTAGHR*QVNDNTPCKCN
Trigger: GTTGCATTTGCACGGGGTGTTGTCGTTAACTTGGCATCTGTGTCCAGCCGTGCTGTCAGAGTCAATCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp AGTCTTAATCAGGGTCCAGGGGCTCGACACCTTTCCTaGACTGTTTACAGCCACCACACCAATGTGGTATGT +
Preference number: 6 (lower is better)
Translates to: SLNQGPGARHLS*TVYSHHTNVVC
Trigger: ACATACCACATTGGTGTGGTGGCTGTAAACAGTGCAGGAAAGGTGTCGAGCCCCTGGACCCTGATTAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp ATGTTGTGTTCCCCCAGTCCTCTTCCTCCGAGCGTCTaGGGATCACTTCGTAATGGATTATCTTCCCATTGG +
Preference number: 6 (lower is better)
Translates to: MLCSPSPLPPSV*GSLRNGLSSHW
Trigger: CCAATGGGAAGATAATCCATTACGAAGTGATCCGCAGACGCTCGGAGGAAGAGGACTGGGGGAACACAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CTGCCTTACACTGACTACATTGTCTCCCTCCAACATTaGGCTTACAAACGCACTGCCCTGTCTCAGTGTCAC +
Preference number: 6 (lower is better)
Translates to: LPYTDYIVSLQH*AYKRTALSQCH
Trigger: GTGACACTGAGACAGGGCAGTGCGTTTGTAAGCCCAATGTTGGAGGGAGACAATGTAGTCAGTGTAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp ATTATATCCAACCCCATCACAGCATCGCTGGCTCTCTaGACTCAGTTCAGTGCCGCAGCATTTCACTGGTGT +
Preference number: 6 (lower is better)
Translates to: IISNPITASLAL*TQFSAAAFHWC
Trigger: ACACCAGTGAAATGCTGCGGCACTGAACTGAGTCCAGAGAGCCAGCGATGCTGTGATGGGGTTGGATATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp ACACCTCCCACAGTGTGCTGTGGCTTTCATGGTTGCTaGGCAGATAGTCGCACATACTCTGGTTTCCTTCAT +
Preference number: 6 (lower is better)
Translates to: TPPTVCCGFHGC*ADSRTYSGFLH
Trigger: ATGAAGGAAACCAGAGTATGTGCGACTATCTGCCCAGCAACCATGAAAGCCACAGCACACTGTGGGAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CTCGACTGGAATTTTGGGAAGCAGGTTCCCTGGTGTTaGCCATGCTACAAATATGGAATCAGAGCCCAGCAC +
Preference number: 6 (lower is better)
Translates to: LDWNFGKQVPWC*PCYKYGIRAQH
Trigger: GTGCTGGGCTCTGATTCCATATTTGTAGCATGGCCAACACCAGGGAACCTGCTTCCCAAAATTCCAGTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TTGGAGGGGACTCATAGACACATAGGATATCTCTGGTaGAGAGAGGCCATCTGGGGGTGCTTGCAATGTTCT +
Preference number: 6 (lower is better)
Translates to: LEGTHRHIGYLW*REAIWGCLQCS
Trigger: AGAACATTGCAAGCACCCCCAGATGGCCTCTCTCCACCAGAGATATCCTATGTGTCTATGAGTCCCCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CAGGCCAGATCCAGTAGCAGCATCATATTGGACCAGTaGAGTCTTAACACTTCCAATGTCGGTCGTGCAGGT +
Preference number: 6 (lower is better)
Translates to: QARSSSSIILDQ*SLNTSNVGRAG
Trigger: ACCTGCACGACCGACATTGGAAGTGTTAAGACTCCACTGGTCCAATATGATGCTGCTACTGGATCTGGCCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS CAA 72 bp GTTACCCCTAGTTTGCAAGGACACTGCCCGGTTGACTaGTCACACCTTAGAGAGCCATTTACCGTTCCCATC +
Preference number: 6 (lower is better)
Translates to: VTPSLQGHCPVD*SHLREPFTVPI
Trigger: GATGGGAACGGTAAATGGCTCTCTAAGGTGTGACAAGTCAACCGGGCAGTGTCCTTGCAAACTAGGGGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GACCAGTTACCCCTAGTTTGCAAGGACACTGCCCGGTaGACTTGTCACACCTTAGAGAGCCATTTACCGTTC +
Preference number: 6 (lower is better)
Translates to: DQLPLVCKDTAR*TCHTLESHLPF
Trigger: GAACGGTAAATGGCTCTCTAAGGTGTGACAAGTCAACCGGGCAGTGTCCTTGCAAACTAGGGGTAACTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CCATACTGTAGGTGGCCCCTGCGTTTGAGGAGGTGCTaGGGCTGTGGTTACTATAATAGGCAAGCTGTAGAA +
Preference number: 6 (lower is better)
Translates to: PYCRWPLRLRRC*GCGYYNRQAVE
Trigger: TTCTACAGCTTGCCTATTATAGTAACCACAGCCCAAGCACCTCCTCAAACGCAGGGGCCACCTACAGTATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GGGACTGATTTTCCATACTGTAGGTGGCCCCTGCGTTaGAGGAGGTGCTTGGGCTGTGGTTACTATAATAGG +
Preference number: 6 (lower is better)
Translates to: GTDFPYCRWPLR*RRCLGCGYYNR
Trigger: CCTATTATAGTAACCACAGCCCAAGCACCTCCTCAAACGCAGGGGCCACCTACAGTATGGAAAATCAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TGGCACTTGACTGCTTTGCAAAGCTCATCACGCGGTTaGTCTGTTAACTTCTGGGTTTCAGAGCATGGGCGC +
Preference number: 6 (lower is better)
Translates to: WHLTALQSSSRG*SVNFWVSEHGR
Trigger: GCGCCCATGCTCTGAAACCCAGAAGTTAACAGACAAACCGCGTGATGAGCTTTGCAAAGCAGTCAAGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CACGTGTGCCCACAGACTTTTCCAGGGTATTGGCACTaGACTGCTTTGCAAAGCTCATCACGCGGTTTGTCT +
Preference number: 6 (lower is better)
Translates to: HVCPQTFPGYWH*TALQSSSRGLS
Trigger: AGACAAACCGCGTGATGAGCTTTGCAAAGCAGTCAAGTGCCAATACCCTGGAAAAGTCTGTGGGCACACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GGCTCTTCCCACTGTAAGAAAATAACATCTTCATGTTaGCCCGTCCTGGCCCATCTAGGGGCCTTGACTCCT +
Preference number: 6 (lower is better)
Translates to: GSSHCKKITSSC*PVLAHLGALTP
Trigger: AGGAGTCAAGGCCCCTAGATGGGCCAGGACGGGCAAACATGAAGATGTTATTTTCTTACAGTGGGAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GTATGTTGTGAATGGTTCCAAGCCAAAGAGATGGGCTaGACGACTCGTTCCCGTCACCGTGAAAGCATGCAC +
Preference number: 6 (lower is better)
Translates to: VCCEWFQAKEMG*TTRSRHRESMH
Trigger: GTGCATGCTTTCACGGTGACGGGAACGAGTCGTCAAGCCCATCTCTTTGGCTTGGAACCATTCACAACATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GTTAGAGTGTCGGGGTGGAAGCCAGGAAATCAGCAGTaGGAGGGGACTCATAGACACATAGGATATCTCTGG +
Preference number: 6 (lower is better)
Translates to: VRVSGWKPGNQQ*EGTHRHIGYLW
Trigger: CCAGAGATATCCTATGTGTCTATGAGTCCCCTCCAACTGCTGATTTCCTGGCTTCCACCCCGACACTCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TTGGCTTTGACTTGGGATCCGCAGTACAGACACACTTaGGCTGCTCCGAATACTCATAGGTGTCCCAGACCT +
Preference number: 6 (lower is better)
Translates to: LALTWDPQYRHT*AAPNTHRCPRP
Trigger: AGGTCTGGGACACCTATGAGTATTCGGAGCAGCCAAAGTGTGTCTGTACTGCGGATCCCAAGTCAAAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS CAA 72 bp ATAGTTTCCCACAGTGAGTCTTCCGTAACAACCTTCTaGTCTGCCATGTCCATGAGCTGGCTGACACTGCGG +
Preference number: 6 (lower is better)
Translates to: IVSHSESSVTTF*SAMSMSWLTLR
Trigger: CCGCAGTGTCAGCCAGCTCATGGACATGGCAGACAAGAAGGTTGTTACGGAAGACTCACTGTGGGAAACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS CAA 90 bp GCATTGGCATCTTCCACTGACAATGATCTCATCCACTGCATAGTATaGGTGTCTCCAGTCAACAGTGTGTCCAGCCGGATAGTACTGCCC +
Preference number: 6 (lower is better)
Translates to: ALASSTDNDLIHCIV*VSPVNSVSSRIVLP
Trigger: GGGCAGTACTATCCGGCTGGACACACTGTTGACTGGAGACACCAATACTATGCAGTGGATGAGATCATTGTCAGTGGAAGATGCCAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GAGTTCTGTGGGACTGATTTTCCATACTGTAGGTGGCCCCTGCGTTaGAGGAGGTGCTTGGGCTGTGGTTACTATAATAGGCAAGCTGTA +
Preference number: 6 (lower is better)
Translates to: EFCGTDFPYCRWPLR*RRCLGCGYYNRQAV
Trigger: TACAGCTTGCCTATTATAGTAACCACAGCCCAAGCACCTCCTCAAACGCAGGGGCCACCTACAGTATGGAAAATCAGTCCCACAGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp CTGTGCTGTGTGCAAGATGACTTGGGAGCTGTTTGTGCACCCTGCTaGTGTGCATGCACCAACTATAATCTCGTAGGCTGCGAATACTCT +
Preference number: 6 (lower is better)
Translates to: LCCVQDDLGAVCAPC*CACTNYNLVGCEYS
Trigger: AGAGTATTCGCAGCCTACGAGATTATAGTTGGTGCATGCACACAAGCAGGGTGCACAAACAGCTCCCAAGTCATCTTGCACACAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp AAAATAACATCTTCATGTTTGCCCGTCCTGGCCCATCTAGGGGCCTaGACTCCTTCAGGCACATCTTCTCTTGTGCTAGCTCTCACGGAT +
Preference number: 6 (lower is better)
Translates to: KITSSCLPVLAHLGA*TPSGTSSLVLALTD
Trigger: ATCCGTGAGAGCTAGCACAAGAGAAGATGTGCCTGAAGGAGTCAAGGCCCCTAGATGGGCCAGGACGGGCAAACATGAAGATGTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp CAGTTAACAGTACTGTCACTTGATAGGCATCCATCCTaGTTGACTCTGACAGCACGGCTGGACACAGATGCC +
Preference number: 6 (lower is better)
Translates to: QLTVLSLDRHPS*LTLTARLDTDA
Trigger: GGCATCTGTGTCCAGCCGTGCTGTCAGAGTCAATCAGGATGGATGCCTATCAAGTGACAGTACTGTTAACTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GCCATGCTACAAATATGGAATCAGAGCCCAGCACAGTaGCATTACATGGGGGATGAATGTCTTCTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: AMLQIWNQSPAQ*HYMGDECLLGS
Trigger: GGACCCCAGAAGACATTCATCCCCCATGTAATGTCACTGTGCTGGGCTCTGATTCCATATTTGTAGCATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp ACACAATGGCTCCATCTCTCCGAAGCTCATAACTTCTaGTCAGGCCATGTGGGTTTCTTGGAGGTGTCCATG +
Preference number: 6 (lower is better)
Translates to: TQWLHLSEAHNF*SGHVGFLEVSM
Trigger: CATGGACACCTCCAAGAAACCCACATGGCCTGATCAGAAGTTATGAGCTTCGGAGAGATGGAGCCATTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CACTTAAGTCCTTTGGCTTCCTTCTTGCATGCACACTaGCCAGAAAGCGGATCACAGAGTTGGTTCACTGAG +
Preference number: 6 (lower is better)
Translates to: HLSPLASFLHAH*PESGSQSWFTE
Trigger: CTCAGTGAACCAACTCTGTGATCCGCTTTCTGGGCAGTGTGCATGCAAGAAGGAAGCCAAAGGACTTAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TTTCCATACTGTAGGTGGCCCCTGCGTTTGAGGAGGTaGTTGGGCTGTGGTTACTATAATAGGCAAGCTGTA +
Preference number: 6 (lower is better)
Translates to: FPYCRWPLRLRR*LGCGYYNRQAV
Trigger: TACAGCTTGCCTATTATAGTAACCACAGCCCAAGCACCTCCTCAAACGCAGGGGCCACCTACAGTATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TGTGTGCAAGATGACTTGGGAGCTGTTTGTGCACCCTaGTTGTGTGCATGCACCAACTATAATCTCGTAGGC +
Preference number: 6 (lower is better)
Translates to: CVQDDLGAVCAP*LCACTNYNLVG
Trigger: GCCTACGAGATTATAGTTGGTGCATGCACACAAGCAGGGTGCACAAACAGCTCCCAAGTCATCTTGCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GTAGATGTTATAATGGGTAATGGCCCCATTGCACTTTaGAGGCTGCCTCCAGATGACCGACAACATCCTAGC +
Preference number: 6 (lower is better)
Translates to: VDVIMGNGPIAL*RLPPDDRQHPS
Trigger: GCTAGGATGTTGTCGGTCATCTGGAGGCAGCCTGCAAAGTGCAATGGGGCCATTACCCATTATAACATCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CACAACACAGCATTCCTGGGAGGTAACTGTATACCATaGCCTCTTCTCCTCCACCACAGCACTGGAAATCTT +
Preference number: 6 (lower is better)
Translates to: HNTAFLGGNCIP*PLLLHHSTGNL
Trigger: AAGATTTCCAGTGCTGTGGTGGAGGAGAAGAGGGCATGGTATACAGTTACCTCCCAGGAATGCTGTGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp ACAGAGGCATCTGGACAAGGTAGTCCTCACTCCAACTaGTACCACCTCCAGTTCTCGCTTCCAACTTGTAAA +
Preference number: 6 (lower is better)
Translates to: TEASGQGSPHSN*YHLQFSLPTCK
Trigger: TTTACAAGTTGGAAGCGAGAACTGGAGGTGGTAGCAGTTGGAGTGAGGACTACCTTGTCCAGATGCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TGGAATTTTGGGAAGCAGGTTCCCTGGTGTTGGCCATaGTACAAATATGGAATCAGAGCCCAGCACAGTGAC +
Preference number: 6 (lower is better)
Translates to: WNFGKQVPWCWP*YKYGIRAQHSD
Trigger: GTCACTGTGCTGGGCTCTGATTCCATATTTGTAGCATGGCCAACACCAGGGAACCTGCTTCCCAAAATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TGTGTGAACGGAGACAGGTTTTTCAGGTGTGCAGATTaGCGGTGTCTGACAGAGAAGACTAAGAGCGTCACA +
Preference number: 6 (lower is better)
Translates to: CVNGDRFFRCAD*RCLTEKTKSVT
Trigger: TGTGACGCTCTTAGTCTTCTCTGTCAGACACCGGCAATCTGCACACCTGAAAAACCTGTCTCCGTTCACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp ATAGGATATCTCTGGTGGAGAGAGGCCATCTGGGGGTaGTTGCAATGTTCTCACCACATTCCAAGAGCTACA +
Preference number: 6 (lower is better)
Translates to: IGYLWWREAIWG*LQCSHHIPRAT
Trigger: TGTAGCTCTTGGAATGTGGTGAGAACATTGCAAGCACCCCCAGATGGCCTCTCTCCACCAGAGATATCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GTCCATGTAATTTCTATTGATTCTGGGCCTGTGATGTaGAGTGTTGGTGGGTCCATGTTCTCTGGTGGAGCC +
Preference number: 6 (lower is better)
Translates to: VHVISIDSGPVM*SVGGSMFSGGA
Trigger: GGCTCCACCAGAGAACATGGACCCACCAACACTGCACATCACAGGCCCAGAATCAATAGAAATTACATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GGAAGCTGCCGTTGTAGATTAGCAGTGAACTGGATGTaGCAGGCCAGGCTGCTACTTGTCTTCTGTACAATT +
Preference number: 6 (lower is better)
Translates to: GSCRCRLAVNWM*QARLLLVFCTI
Trigger: AATTGTACAGAAGACAAGTAGCAGCCTGGCCTGGCACATCCAGTTCACTGCTAATCTACAACGGCAGCTTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TGGATCCGAATTGCCACAGGCTGTAGGCTGGAGAACTaGGTGATGACTTTAAGCACCTGGTACTGTCCATTT +
Preference number: 6 (lower is better)
Translates to: WIRIATGCRLEN*VMTLSTWYCPF
Trigger: AAATGGACAGTACCAGGTGCTTAAAGTCATCACCCAGTTCTCCAGCCTACAGCCTGTGGCAATTCGGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp AGTGTATGTAAGCCAGTGAGCATTTGGGCACTCGGGTaGACTCCAGGACACATTGATGGTAGAAGAACTCTG +
Preference number: 6 (lower is better)
Translates to: SVCKPVSIWALG*TPGHIDGRRTL
Trigger: CAGAGTTCTTCTACCATCAATGTGTCCTGGAGTCCACCCGAGTGCCCAAATGCTCACTGGCTTACATACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp ATTCCTGAACAGAGTGTATGTAAGCCAGTGAGCATTTaGGCACTCGGGTGGACTCCAGGACACATTGATGGT +
Preference number: 6 (lower is better)
Translates to: IPEQSVCKPVSI*ALGWTPGHIDG
Trigger: ACCATCAATGTGTCCTGGAGTCCACCCGAGTGCCCAAATGCTCACTGGCTTACATACACTCTGTTCAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp ATCCTGCTCCTAGGAACTGAACTCCTTCTTCTAGGTTaGTGGGACAACCTTCCCAGCTGGGATGAACATTCA +
Preference number: 6 (lower is better)
Translates to: ILLLGTELLLLG*WDNLPSWDEHS
Trigger: TGAATGTTCATCCCAGCTGGGAAGGTTGTCCCACCAACCTAGAAGAAGGAGTTCAGTTCCTAGGAGCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GACCAGTCACTTCGTAGCTTAACGATGCAGAAGGAATaGGGAATAATTCTAGACGGCCATGAGTGGAGGGAC +
Preference number: 6 (lower is better)
Translates to: DQSLRSLTMQKE*GIILDGHEWRD
Trigger: GTCCCTCCACTCATGGCCGTCTAGAATTATTCCCCATTCCTTCTGCATCGTTAAGCTACGAAGTGACTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TTCAAAGGATTATATCCAACCCCATCACAGCATCGCTaGCTCTCTGGACTCAGTTCAGTGCCGCAGCATTTC +
Preference number: 6 (lower is better)
Translates to: FKGLYPTPSQHR*LSGLSSVPQHF
Trigger: GAAATGCTGCGGCACTGAACTGAGTCCAGAGAGCCAGCGATGCTGTGATGGGGTTGGATATAATCCTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp AGACACATAGGATATCTCTGGTGGAGAGAGGCCATCTaGGGGTGCTTGCAATGTTCTCACCACATTCCAAGA +
Preference number: 6 (lower is better)
Translates to: RHIGYLWWREAI*GCLQCSHHIPR
Trigger: TCTTGGAATGTGGTGAGAACATTGCAAGCACCCCCAGATGGCCTCTCTCCACCAGAGATATCCTATGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CTTGCAGCTTTGCCTGCAGAATTCACCGCCCATACCTaGTATTCGTATTCCGTGAATGGTAGTAGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: LAALPAEFTAHT*YSYSVNGSSSE
Trigger: CTCAGAGCTACTACCATTCACGGAATACGAATACCAGGTATGGGCGGTGAATTCTGCAGGCAAAGCTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp AGAAAATTTTGTCCACCATCCTTGGTATGTAGAGTGTaGTGTCTAGGCCACTGTACACCCTCCGTCCTCCGT +
Preference number: 6 (lower is better)
Translates to: RKFCPPSLVCRV*CLGHCTPSVLR
Trigger: ACGGAGGACGGAGGGTGTACAGTGGCCTAGACACCACACTCTACATACCAAGGATGGTGGACAAAATTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CACGAGAAGCAAGCTTCCATTACGCCTCAGCTGATATaGAGAAATGAGGCCGTTGGGCCTTTCTGGAGGATT +
Preference number: 6 (lower is better)
Translates to: HEKQASITPQLI*RNEAVGPFWRI
Trigger: AATCCTCCAGAAAGGCCCAACGGCCTCATTTCTCAATATCAGCTGAGGCGTAATGGAAGCTTGCTTCTCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp ACTCGACTGGAATTTTGGGAAGCAGGTTCCCTGGTGTaGGCCATGCTACAAATATGGAATCAGAGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: TRLEFWEAGSLV*AMLQIWNQSPA
Trigger: TGCTGGGCTCTGATTCCATATTTGTAGCATGGCCAACACCAGGGAACCTGCTTCCCAAAATTCCAGTCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CCCGTGTCATTATACACCCATGCATTCCCTTGCGTGTaGTATTCTGTGAAAACAGTGTTCCCGTCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: PVSLYTHAFPCV*YSVKTVFPSAC
Trigger: GCAGGCAGACGGGAACACTGTTTTCACAGAATACAACACGCAAGGGAATGCATGGGTGTATAATGACACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp AGGGAAGACTTCTTCCTTTCTAGATGGTACAAAGGAGGTGGTCCATaGACTCCTGCAGGAGGAAGCCACCTGATATGGACTGTAGTACTG +
Preference number: 6 (lower is better)
Translates to: REDFFLSRWYKGGGP*TPAGGSHLIWTVVL
Trigger: CAGTACTACAGTCCATATCAGGTGGCTTCCTCCTGCAGGAGTCAATGGACCACCTCCTTTGTACCATCTAGAAAGGAAGAAGTCTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp TGTCCAAGGGCGGAGGGCAGGATCATTATCAATAAACTTCATGGCTaGACTTCTTGCCAGGGTCACCAGGTTCCTAACTTCCTTTTTCCC +
Preference number: 6 (lower is better)
Translates to: CPRAEGRIIINKLHG*TSCQGHQVPNFLFP
Trigger: GGGAAAAAGGAAGTTAGGAACCTGGTGACCCTGGCAAGAAGTCAAGCCATGAAGTTTATTGATAATGATCCTGCCCTCCGCCCTTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp CACGTGTGCCCACAGACTTTTCCAGGGTATTGGCACTTGACTGCTTaGCAAAGCTCATCACGCGGTTTGTCTGTTAACTTCTGGGTTTCA +
Preference number: 6 (lower is better)
Translates to: HVCPQTFPGYWHLTA*QSSSRGLSVNFWVS
Trigger: TGAAACCCAGAAGTTAACAGACAAACCGCGTGATGAGCTTTGCAAAGCAGTCAAGTGCCAATACCCTGGAAAAGTCTGTGGGCACACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp CTTGACTCCTTCAGGCACATCTTCTCTTGTGCTAGCTCTCACGGATaGGCTGAATCCTCGCCCGTAGCTGTTCCATGCAGAAATTCTATA +
Preference number: 6 (lower is better)
Translates to: LDSFRHIFSCASSHG*AESSPVAVPCRNSI
Trigger: TATAGAATTTCTGCATGGAACAGCTACGGGCGAGGATTCAGCCAATCCGTGAGAGCTAGCACAAGAGAAGATGTGCCTGAAGGAGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp AAGCCCAATAACATTCGCTTTGCACGAGCACTGGCCTaGATTTTGGTGACAGGTAATGTCTCCATCCACGGT +
Preference number: 6 (lower is better)
Translates to: KPNNIRFARALA*ILVTGNVSIHG
Trigger: ACCGTGGATGGAGACATTACCTGTCACCAAAATTCAGGCCAGTGCTCGTGCAAAGCGAATGTTATTGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GCTGAGATGGAGTTTTGCTGCAGCCTAATAGATTGTTaGCGTCCAAGTGGCTTGCACCAGGAACACAAGTGT +
Preference number: 6 (lower is better)
Translates to: AEMEFCCSLIDC*RPSGLHQEHKC
Trigger: ACACTTGTGTTCCTGGTGCAAGCCACTTGGACGTCAACAATCTATTAGGCTGCAGCAAAACTCCATCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp CGGAGGGCAGGATCATTATCAATAAACTTCATGGCTTaGCTTCTTGCCAGGGTCACCAGGTTCCTAACTTCC +
Preference number: 6 (lower is better)
Translates to: RRAGSLSINFMA*LLARVTRFLTS
Trigger: GGAAGTTAGGAACCTGGTGACCCTGGCAAGAAGTCAAGCCATGAAGTTTATTGATAATGATCCTGCCCTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GTACCCGTTACCTCCAGAGCAAGCAACGATGGTGACTaGATAGTTTGTGAAAGGGATCAGATGCTTGACCAG +
Preference number: 6 (lower is better)
Translates to: VPVTSRASNDGD*IVCERDQMLDQ
Trigger: CTGGTCAAGCATCTGATCCCTTTCACAAACTATTCAGTCACCATCGTTGCTTGCTCTGGAGGTAACGGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp ATAGACAGAAGACTCGGTGACAACGGCATTTGGGTTTaGAGGCGATGTCCAGATGACACGTACAGCTGTACT +
Preference number: 6 (lower is better)
Translates to: IDRRLGDNGIWV*RRCPDDTYSCT
Trigger: AGTACAGCTGTACGTGTCATCTGGACATCGCCTTCAAACCCAAATGCCGTTGTCACCGAGTCTTCTGTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GCGATGTATTTGTCCTCACAGCAGCTGTATCCAGGCTaGGGGTCATACAGAAGTCCGTCACAACATACCTTA +
Preference number: 6 (lower is better)
Translates to: AMYLSSQQLYPG*GSYRSPSQHTL
Trigger: TAAGGTATGTTGTGACGGACTTCTGTATGACCCTCAGCCTGGATACAGCTGCTGTGAGGACAAATACATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp CACTGTTTACAGCCACCACACCAATGTGGTATGTTGTaGATGGTTCCAAGCCAAAGAGATGGGCTTGACGAC +
Preference number: 6 (lower is better)
Translates to: HCLQPPHQCGML*MVPSQRDGLDD
Trigger: GTCGTCAAGCCCATCTCTTTGGCTTGGAACCATTCACAACATACCACATTGGTGTGGTGGCTGTAAACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp AGAGTCACACTTAAGTCCTTTGGCTTCCTTCTTGCATaGACACTGCCCAGAAAGCGGATCACAGAGTTGGTT +
Preference number: 6 (lower is better)
Translates to: RVTLKSFGFLLA*TLPRKRITELV
Trigger: AACCAACTCTGTGATCCGCTTTCTGGGCAGTGTGCATGCAAGAAGGAAGCCAAAGGACTTAAGTGTGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp AGTGACAAACTCTTTGCAGAAACACTGGCCTGTGACTaGATCACAAGTTCCATTCGAGGCTCCTGCTACATG +
Preference number: 6 (lower is better)
Translates to: SDKLFAETLACD*ITSSIRGSCYM
Trigger: CATGTAGCAGGAGCCTCGAATGGAACTTGTGATGCAGTCACAGGCCAGTGTTTCTGCAAAGAGTTTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CATAGGAGACACAGGGCTCAGTGCTGTCCACAGGTGTaGATGATAAAACATATTTTGCCACAGGATCAGAGC +
Preference number: 6 (lower is better)
Translates to: HRRHRAQCCPQV*MIKHILPQDQS
Trigger: GCTCTGATCCTGTGGCAAAATATGTTTTATCATGCACACCTGTGGACAGCACTGAGCCCTGTGTCTCCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp ACGTTCTCAACCAAGAGATCCAGGTGTGCCGAGGGTTaGCAAGTTACTATGATTGATGTTGGAGTGTATGGG +
Preference number: 6 (lower is better)
Translates to: TFSTKRSRCAEG*QVTMIDVGVYG
Trigger: CCCATACACTCCAACATCAATCATAGTAACTTGGCAACCCTCGGCACACCTGGATCTCTTGGTTGAGAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CTTCATTGTCCTTCATTCCCCAAACACTGCAATTTCTaGCAAAATACTGCCAGTCCTCCCAGGGAGAGCTGT +
Preference number: 6 (lower is better)
Translates to: LHCPSFPKHCNF*QNTASPPRESC
Trigger: ACAGCTCTCCCTGGGAGGACTGGCAGTATTTTGCCAGAAATTGCAGTGTTTGGGGAATGAAGGACAATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TCACAGAGTTGGTTCACTGAGCCGTGGAGGTTACATTaGCAAGGCTCACATCCATCACCATTAAAACTCTGG +
Preference number: 6 (lower is better)
Translates to: SQSWFTEPWRLH*QGSHPSPLKLW
Trigger: CCAGAGTTTTAATGGTGATGGATGTGAGCCTTGCCAATGTAACCTCCACGGCTCAGTGAACCAACTCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TTGCAAAGCTCATCACGCGGTTTGTCTGTTAACTTCTaGGTTTCAGAGCATGGGCGCCATGTTTTCCGCAAA +
Preference number: 6 (lower is better)
Translates to: LQSSSRGLSVNF*VSEHGRHVFRK
Trigger: TTTGCGGAAAACATGGCGCCCATGCTCTGAAACCCAGAAGTTAACAGACAAACCGCGTGATGAGCTTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp AAATATGGAATCAGAGCCCAGCACAGTGACATTACATaGGGGATGAATGTCTTCTGGGGTCCACAGAGGCAT +
Preference number: 6 (lower is better)
Translates to: KYGIRAQHSDIT*GMNVFWGPQRH
Trigger: ATGCCTCTGTGGACCCCAGAAGACATTCATCCCCCATGTAATGTCACTGTGCTGGGCTCTGATTCCATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GTTTACAGCCACCACACCAATGTGGTATGTTGTGAATaGTTCCAAGCCAAAGAGATGGGCTTGACGACTCGT +
Preference number: 6 (lower is better)
Translates to: VYSHHTNVVCCE*FQAKEMGLTTR
Trigger: ACGAGTCGTCAAGCCCATCTCTTTGGCTTGGAACCATTCACAACATACCACATTGGTGTGGTGGCTGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GCCAGGGTCACCAGGTTCCTAACTTCCTTTTTCCCTTaGACTCGTCTCTCGATTGTAACGTTCTCAACCAAG +
Preference number: 6 (lower is better)
Translates to: ARVTRFLTSFFP*TRLSIVTFSTK
Trigger: CTTGGTTGAGAACGTTACAATCGAGAGACGAGTCAAAGGGAAAAAGGAAGTTAGGAACCTGGTGACCCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GCGGAGGGCAGGATCATTATCAATAAACTTCATGGCTaGACTTCTTGCCAGGGTCACCAGGTTCCTAACTTC +
Preference number: 6 (lower is better)
Translates to: AEGRIIINKLHG*TSCQGHQVPNF
Trigger: GAAGTTAGGAACCTGGTGACCCTGGCAAGAAGTCAAGCCATGAAGTTTATTGATAATGATCCTGCCCTCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TCCTCCTCCCACATGGTCACATGCACAACTGTGCTGTaGATTGCGTGGACTCCATTGAAAACCAAGAGGAAA +
Preference number: 6 (lower is better)
Translates to: SSSHMVTCTTVL*IAWTPLKTKRK
Trigger: TTTCCTCTTGGTTTTCAATGGAGTCCACGCAATCAACAGCACAGTTGTGCATGTGACCATGTGGGAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TACTCCAGGACCCCATCATTGAAGATGTTGTATGCCTaGATCACTCCATTGGTCTTCACTGGCTCTGACCAC +
Preference number: 6 (lower is better)
Translates to: YSRTPSLKMLYA*ITPLVFTGSDH
Trigger: GTGGTCAGAGCCAGTGAAGACCAATGGAGTGATCAAGGCATACAACATCTTCAATGATGGGGTCCTGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CTGCAGACCCGTGTCATTATACACCCATGCATTCCCTaGCGTGTTGTATTCTGTGAAAACAGTGTTCCCGTC +
Preference number: 6 (lower is better)
Translates to: LQTRVIIHPCIP*RVVFCENSVPV
Trigger: GACGGGAACACTGTTTTCACAGAATACAACACGCAAGGGAATGCATGGGTGTATAATGACACGGGTCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GGCATTGAAATTGAGAGCAGGAAGCACTCCATCTCTTaGAAGTCTGTAGCCCTGGATGACACCGTTAGAGTG +
Preference number: 6 (lower is better)
Translates to: GIEIESRKHSIS*KSVALDDTVRV
Trigger: CACTCTAACGGTGTCATCCAGGGCTACAGACTTCAAAGAGATGGAGTGCTTCCTGCTCTCAATTTCAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp GCACCAGGAACACAAGTGTCACATTTTGAGCCAGTGACAAACTCTTaGCAGAAACACTGGCCTGTGACTGCATCACAAGTTCCATTCGAG +
Preference number: 6 (lower is better)
Translates to: APGTQVSHFEPVTNS*QKHWPVTASQVPFE
Trigger: CTCGAATGGAACTTGTGATGCAGTCACAGGCCAGTGTTTCTGCAAAGAGTTTGTCACTGGCTCAAAATGTGACACTTGTGTTCCTGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp TTCTTAAGTGCATTCACACGGACAGATACCACAGAGCCTTCCTTTTaGATACTGACTGTATTCCACTTTCCATCACAATCGGCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: FLSAFTRTDTTEPSF*ILTVFHFPSQSASP
Trigger: GGGGCTGGCCGATTGTGATGGAAAGTGGAATACAGTCAGTATCAAAAAGGAAGGCTCTGTGGTATCTGTCCGTGTGAATGCACTTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp CTAGCTTTCACATTGATAAGAATTGGAGCATCTATAGGTCCAGGCTaGTCCTCTGTAGTCATGAGCGGAGTCCAAGCACTGTATGCAGTG +
Preference number: 6 (lower is better)
Translates to: LAFTLIRIGASIGPG*SSVVMSGVQALYAV
Trigger: CACTGCATACAGTGCTTGGACTCCGCTCATGACTACAGAGGACAAGCCTGGACCTATAGATGCTCCAATTCTTATCAATGTGAAAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp AGTGTCCTTCTGAGACCTCTGGCTTTGTCTCATAAATaGCAGGTATGCTCCTTGTCGAACTGTGCACATTGG +
Preference number: 6 (lower is better)
Translates to: SVLLRPLALSHK*QVCSLSNCAHW
Trigger: CCAATGTGCACAGTTCGACAAGGAGCATACCTGTCATTTATGAGACAAAGCCAGAGGTCTCAGAAGGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GCAAGCTTCCATTACGCCTCAGCTGATATTGAGAAATaGGGCCGTTGGGCCTTTCTGGAGGATTCCAATATA +
Preference number: 6 (lower is better)
Translates to: ASFHYASADIEK*GRWAFLEDSNI
Trigger: TATATTGGAATCCTCCAGAAAGGCCCAACGGCCTCATTTCTCAATATCAGCTGAGGCGTAATGGAAGCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp CATTTTGGCAGGCTTGGATCCGTATTTCATACTGTGTaGACGGAGACAGGTTTTTCAGGTGTGCAGATTGCC +
Preference number: 6 (lower is better)
Translates to: HFGRLGSVFHTV*TETGFSGVQIA
Trigger: GGCAATCTGCACACCTGAAAAACCTGTCTCCGTTCACACAGTATGAAATACGGATCCAAGCCTGCCAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp AGTGCCTGTATCATCAGTAAACTCCAGAGCTCCTTCTaGCCAGACAAAGAGCAGAGACTCTTCTTCAGTGTC +
Preference number: 6 (lower is better)
Translates to: SACIISKLQSSF*PDKEQRLFFSV
Trigger: GACACTGAAGAAGAGTCTCTGCTCTTTGTCTGGTCAGAAGGAGCTCTGGAGTTTACTGATGATACAGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp TATACACCCATGCATTCCCTTGCGTGTTGTATTCTGTaGAAACAGTGTTCCCGTCTGCCTGCCATGTTGTGT +
Preference number: 6 (lower is better)
Translates to: YTPMHSLACCIL*KQCSRLPAMLC
Trigger: ACACAACATGGCAGGCAGACGGGAACACTGTTTTCACAGAATACAACACGCAAGGGAATGCATGGGTGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp CTGTACAATTCAAAGCATATGATTTTTCCATTTGGCTaGAGTGGTCCTGCCCACCACACGGCTACTATGGGC +
Preference number: 6 (lower is better)
Translates to: LYNSKHMIFPFG*SGPAHHTATMG
Trigger: GCCCATAGTAGCCGTGTGGTGGGCAGGACCACTTCAGCCAAATGGAAAAATCATATGCTTTGAATTGTACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GCATTGGCATCTTCCACTGACAATGATCTCATCCACTaGATAGTATTGGTGTCTCCAGTCAACAGTGTGTCC +
Preference number: 6 (lower is better)
Translates to: ALASSTDNDLIH*IVLVSPVNSVS
Trigger: GGACACACTGTTGACTGGAGACACCAATACTATGCAGTGGATGAGATCATTGTCAGTGGAAGATGCCAATGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GAAATGTCACTTGGAGTATCTTCCGCTGTGCTGACTTaGGTTCCATTGCTTTTCACGCAGGCGTCTTTTGTA +
Preference number: 6 (lower is better)
Translates to: EMSLGVSSAVLT*VPLLFTQASFV
Trigger: TACAAAAGACGCCTGCGTGAAAAGCAATGGAACGCAAGTCAGCACAGCGGAAGATACTCCAAGTGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GTGTGTGTTTACATCTCCAGAATGAACTATTTCCTCTaGTGCAGAACACAGTCCTTCCACCGCTTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: VCVYISRMNYFL*CRTQSFHRFLP
Trigger: GGGAAGAAAGCGGTGGAAGGACTGTGTTCTGCAGCAGAGGAAATAGTTCATTCTGGAGATGTAAACACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TGCAGACCCGTGTCATTATACACCCATGCATTCCCTTaGGTGTTGTATTCTGTGAAAACAGTGTTCCCGTCT +
Preference number: 6 (lower is better)
Translates to: CRPVSLYTHAFP*VLYSVKTVFPS
Trigger: AGACGGGAACACTGTTTTCACAGAATACAACACGCAAGGGAATGCATGGGTGTATAATGACACGGGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TGTCCAGATGTCAGGAGGTCAAAGGTGACATTACCATaGGAAAACGGGATAAAATCAGGAAGCTGGAGACAG +
Preference number: 6 (lower is better)
Translates to: CPDVRRSKVTLP*ENGIKSGSWRQ
Trigger: CTGTCTCCAGCTTCCTGATTTTATCCCGTTTTCCCATGGTAATGTCACCTTTGACCTCCTGACATCTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TATCTCATAGCTCAGTATATCTCCGTTCTGCATAAGTaGGGCTTTCCAAGAGACCTCGACTGTATCTGGTGC +
Preference number: 6 (lower is better)
Translates to: YLIAQYISVLHK*GFPRDLDCIWC
Trigger: GCACCAGATACAGTCGAGGTCTCTTGGAAAGCCCCACTTATGCAGAACGGAGATATACTGAGCTATGAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp CACATGGTCACATGCACAACTGTGCTGTTGATTGCGTaGACTCCATTGAAAACCAAGAGGAAAACCTGGTAC +
Preference number: 6 (lower is better)
Translates to: HMVTCTTVLLIA*TPLKTKRKTWY
Trigger: GTACCAGGTTTTCCTCTTGGTTTTCAATGGAGTCCACGCAATCAACAGCACAGTTGTGCATGTGACCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp ACCTTTCCTGCACTGTTTACAGCCACCACACCAATGTaGTATGTTGTGAATGGTTCCAAGCCAAAGAGATGG +
Preference number: 6 (lower is better)
Translates to: TFPALFTATTPM*YVVNGSKPKRW
Trigger: CCATCTCTTTGGCTTGGAACCATTCACAACATACCACATTGGTGTGGTGGCTGTAAACAGTGCAGGAAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TCTTCCACTGACAATGATCTCATCCACTGCATAGTATaGGTGTCTCCAGTCAACAGTGTGTCCAGCCGGATA +
Preference number: 6 (lower is better)
Translates to: SSTDNDLIHCIV*VSPVNSVSSRI
Trigger: TATCCGGCTGGACACACTGTTGACTGGAGACACCAATACTATGCAGTGGATGAGATCATTGTCAGTGGAAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp ACATTGATAAGAATTGGAGCATCTATAGGTCCAGGCTaGTCCTCTGTAGTCATGAGCGGAGTCCAAGCACTG +
Preference number: 6 (lower is better)
Translates to: TLIRIGASIGPG*SSVVMSGVQAL
Trigger: CAGTGCTTGGACTCCGCTCATGACTACAGAGGACAAGCCTGGACCTATAGATGCTCCAATTCTTATCAATGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CCACAGACTTTTCCAGGGTATTGGCACTTGACTGCTTaGCAAAGCTCATCACGCGGTTTGTCTGTTAACTTC +
Preference number: 6 (lower is better)
Translates to: PQTFPGYWHLTA*QSSSRGLSVNF
Trigger: GAAGTTAACAGACAAACCGCGTGATGAGCTTTGCAAAGCAGTCAAGTGCCAATACCCTGGAAAAGTCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CCATCATTGAAGATGTTGTATGCCTTGATCACTCCATaGGTCTTCACTGGCTCTGACCACTGCAGCAGCAAA +
Preference number: 6 (lower is better)
Translates to: PSLKMLYALITP*VFTGSDHCSSK
Trigger: TTTGCTGCTGCAGTGGTCAGAGCCAGTGAAGACCAATGGAGTGATCAAGGCATACAACATCTTCAATGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp AAGGTGGTGACTGTCACTTCTCGGCTTGGTGTAAAGCCCACACTGTaGTGTACAAAGAGCTTATATTCGTACGTTGTGAACCTGCTAAGA +
Preference number: 6 (lower is better)
Translates to: KVVTVTSRLGVKPTL*CTKSLYSYVVNLLR
Trigger: TCTTAGCAGGTTCACAACGTACGAATATAAGCTCTTTGTACACAACAGTGTGGGCTTTACACCAAGCCGAGAAGTGACAGTCACCACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GCCCATGGAAGTGCAGCCTTATTTGAGTGGCTCTCATaGATTCTTGAAGCACTGAGCTGTTGTAAAAGTCGT +
Preference number: 6 (lower is better)
Translates to: AHGSAALFEWLS*ILEALSCCKSR
Trigger: ACGACTTTTACAACAGCTCAGTGCTTCAAGAATTCATGAGAGCCACTCAAATAAGGCTGCACTTCCATGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GTGTACTGTCCATCAAGAGTAATCTGGCCAAAAGCCTaGTGTCTGACTGCTATGATTTCATGCCACTCTCCA +
Preference number: 6 (lower is better)
Translates to: VYCPSRVIWPKA*CLTAMISCHSP
Trigger: TGGAGAGTGGCATGAAATCATAGCAGTCAGACATCAGGCTTTTGGCCAGATTACTCTTGATGGACAGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TCCACTGTCTTTTCTATCACACACATAGTGCCTCCTTaGTCAAGCTTCAACCACACAGCTAAGGTCAATTCG +
Preference number: 6 (lower is better)
Translates to: STVFSITHIVPP*SSFNHTAKVNS
Trigger: CGAATTGACCTTAGCTGTGTGGTTGAAGCTTGAGCAAGGAGGCACTATGTGTGTGATAGAAAAGACAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp AGGTTTCTGGACCTTCATAGGAGACACAGGGCTCAGTaGTGTCCACAGGTGTGCATGATAAAACATATTTTG +
Preference number: 6 (lower is better)
Translates to: RFLDLHRRHRAQ*CPQVCMIKHIL
Trigger: CAAAATATGTTTTATCATGCACACCTGTGGACAGCACTGAGCCCTGTGTCTCCTATGAAGGTCCAGAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp ATCAAGAGTAATCTGGCCAAAAGCCTGATGTCTGACTaGTATGATTTCATGCCACTCTCCATCCCTGTATCC +
Preference number: 6 (lower is better)
Translates to: IKSNLAKSLMSD*YDFMPLSIPVS
Trigger: GGATACAGGGATGGAGAGTGGCATGAAATCATAGCAGTCAGACATCAGGCTTTTGGCCAGATTACTCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TGTGTTTACATCTCCAGAATGAACTATTTCCTCTGCTaGAGAACACAGTCCTTCCACCGCTTTCTTCCCTGT +
Preference number: 6 (lower is better)
Translates to: CVYISRMNYFLC*RTQSFHRFLPC
Trigger: ACAGGGAAGAAAGCGGTGGAAGGACTGTGTTCTGCAGCAGAGGAAATAGTTCATTCTGGAGATGTAAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TGCCTCCAGATGACCGACAACATCCTAGCTTTCACATaGATAAGAATTGGAGCATCTATAGGTCCAGGCTTG +
Preference number: 6 (lower is better)
Translates to: CLQMTDNILAFT*IRIGASIGPGL
Trigger: CAAGCCTGGACCTATAGATGCTCCAATTCTTATCAATGTGAAAGCTAGGATGTTGTCGGTCATCTGGAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp ACATGCACAACTGTGCTGTTGATTGCGTGGACTCCATaGAAAACCAAGAGGAAAACCTGGTACTCCACGTTT +
Preference number: 6 (lower is better)
Translates to: TCTTVLLIAWTP*KTKRKTWYSTF
Trigger: AAACGTGGAGTACCAGGTTTTCCTCTTGGTTTTCAATGGAGTCCACGCAATCAACAGCACAGTTGTGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TCTGGAGGATTCCAATATAGCTCCACGGTTGTAGAATaGATGATAATGTGTCGCGGTGTCACCCAAACTCCT +
Preference number: 6 (lower is better)
Translates to: SGGFQYSSTVVE*MIMCRGVTQTP
Trigger: AGGAGTTTGGGTGACACCGCGACACATTATCATCAATTCTACAACCGTGGAGCTATATTGGAATCCTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GAATCAGAGTGTCATCTAGATATAACTCATATGTGGTaGTCACTCCATTCGGATACTCAGGCTCTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: ESECHLDITHMW*SLHSDTQALSR
Trigger: CCTGGACAGAGCCTGAGTATCCGAATGGAGTGATCACCACATATGAGTTATATCTAGATGACACTCTGATTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GGCGCCATGTTTTCCGCAAAACGTCATACCCAAGAATaGTACCATTTGGATTTGCTGGTGTTGTCCAATCTA +
Preference number: 6 (lower is better)
Translates to: GAMFSAKRHTQE*YHLDLLVLSNL
Trigger: TAGATTGGACAACACCAGCAAATCCAAATGGTATCATTCTTGGGTATGACGTTTTGCGGAAAACATGGCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TGTATCACGCTGGAGACTGAGTCTGTGACTGAATCATaGAGAGTTCTTGTATCAAATGCAGTACTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: CITLETESVTES*RVLVSNAVLFS
Trigger: GGAGAACAGTACTGCATTTGATACAAGAACTCTCCATGATTCAGTCACAGACTCAGTCTCCAGCGTGATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp GACCGACAACATCCTAGCTTTCACATTGATAAGAATTaGAGCATCTATAGGTCCAGGCTTGTCCTCTGTAGT +
Preference number: 6 (lower is better)
Translates to: DRQHPSFHIDKN*SIYRSRLVLCS
Trigger: ACTACAGAGGACAAGCCTGGACCTATAGATGCTCCAATTCTTATCAATGTGAAAGCTAGGATGTTGTCGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp ACATCTCAGAAGCTCGTATCTCAAATTTGGTCCATTTaGTTTGGATGGTGGCTGCCAAGAAATCCCAACATC +
Preference number: 6 (lower is better)
Translates to: TSQKLVSQIWSI*FGWWLPRNPNI
Trigger: GATGTTGGGATTTCTTGGCAGCCACCATCCAAACCAAATGGACCAAATTTGAGATACGAGCTTCTGAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CATGATAAAACATATTTTGCCACAGGATCAGAGCTGTaGGAGAGTCCAGTCCAGGTAAGTGTAATGGAGTCC +
Preference number: 6 (lower is better)
Translates to: HDKTYFATGSEL*ESPVQVSVMES
Trigger: GGACTCCATTACACTTACCTGGACTGGACTCTCCAACAGCTCTGATCCTGTGGCAAAATATGTTTTATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GGTCTGTTTGAAACTTCAGGGAGATCTCAAAGTCCTTaGCAGCATGAAACGTATCTGAAGGAAGCTCCAGAA +
Preference number: 6 (lower is better)
Translates to: GLFETSGRSQSP*QHETYLKEAPE
Trigger: TTCTGGAGCTTCCTTCAGATACGTTTCATGCTGCAAAGGACTTTGAGATCTCCCTGAAGTTTCAAACAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp GCATTCACACGGACAGATACCACAGAGCCTTCCTTTTaGATACTGACTGTATTCCACTTTCCATCACAATCG +
Preference number: 6 (lower is better)
Translates to: AFTRTDTTEPSF*ILTVFHFPSQS
Trigger: CGATTGTGATGGAAAGTGGAATACAGTCAGTATCAAAAAGGAAGGCTCTGTGGTATCTGTCCGTGTGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp CTCAGAAGCTCGTATCTCAAATTTGGTCCATTTGGTTaGGATGGTGGCTGCCAAGAAATCCCAACATCAGAT +
Preference number: 6 (lower is better)
Translates to: LRSSYLKFGPFG*DGGCQEIPTSD
Trigger: ATCTGATGTTGGGATTTCTTGGCAGCCACCATCCAAACCAAATGGACCAAATTTGAGATACGAGCTTCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp ACTGTCACTTCTCGGCTTGGTGTAAAGCCCACACTGTaGTGTACAAAGAGCTTATATTCGTACGTTGTGAAC +
Preference number: 6 (lower is better)
Translates to: TVTSRLGVKPTL*CTKSLYSYVVN
Trigger: GTTCACAACGTACGAATATAAGCTCTTTGTACACAACAGTGTGGGCTTTACACCAAGCCGAGAAGTGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp TCACCATTAAAACTCTGGAGGAATTTAAATCCGAAATTGCAGCGATaGCATCTAAGCCCAATAACATTCGCTTTGCACGAGCACTGGCCT +
Preference number: 6 (lower is better)
Translates to: SPLKLWRNLNPKLQR*HLSPITFALHEHWP
Trigger: AGGCCAGTGCTCGTGCAAAGCGAATGTTATTGGGCTTAGATGCAATCGCTGCAATTTCGGATTTAAATTCCTCCAGAGTTTTAATGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp GAGCTGCGTAATGTTTGTAAACACATGAGAGATCCATaGAGTAGCAACGTCGTCATCATTGATGAAGGAGAG +
Preference number: 6 (lower is better)
Translates to: ELRNVCKHMRDP*SSNVVIIDEGE
Trigger: CTCTCCTTCATCAATGATGACGACGTTGCTACTTCATGGATCTCTCATGTGTTTACAAACATTACGCAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp AAGTCAAACAGAGGTGGGAATCATTCTGATATAGGTTaGAGTAGCCTGCCTTACACTGACTACATTGTCTCC +
Preference number: 6 (lower is better)
Translates to: KSNRGGNHSDIG*SSLPYTDYIVS
Trigger: GGAGACAATGTAGTCAGTGTAAGGCAGGCTACTTCAACCTATATCAGAATGATTCCCACCTCTGTTTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp CACAGGAATGATGTGAGTCAAGTTCAAGTGTCCTTCTaGGACCTCTGGCTTTGTCTCATAAATGACAGGTAT +
Preference number: 6 (lower is better)
Translates to: HRNDVSQVQVSF*DLWLCLINDRY
Trigger: ATACCTGTCATTTATGAGACAAAGCCAGAGGTCTCAGAAGGACACTTGAACTTGACTCACATCATTCCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp TGTAGAGCTTATTATTTACATAGACAGAAGACTCGGTaGCAACGGCATTTGGGTTTGAAGGCGATGTCCAGA +
Preference number: 6 (lower is better)
Translates to: CRAYYLHRQKTR*QRHLGLKAMSR
Trigger: TCTGGACATCGCCTTCAAACCCAAATGCCGTTGTCACCGAGTCTTCTGTCTATGTAAATAATAAGCTCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp TTCGTTTCTGAAGAGGTACCAAGGGAGGTCGCTCTCTaGTACATGGTTCCTTGTGGATTTTTCTTTGTAGAA +
Preference number: 6 (lower is better)
Translates to: FVSEEVPREVAL*YMVPCGFFFVE
Trigger: TTCTACAAAGAAAAATCCACAAGGAACCATGTATCAGAGAGCGACCTCCCTTGGTACCTCTTCAGAAACGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000060479.14
ENSMUST00000127077.2
CDS CCA 72 bp GATGGAGCTCATATTGGTCATTTTGATGAGAGGCTCTaGCATTCGTATCTCATAGCTCAGTATATCTCCGTT +
Preference number: 6 (lower is better)
Translates to: DGAHIGHFDERL*HSYLIAQYISV
Trigger: AACGGAGATATACTGAGCTATGAGATACGAATGCCAGAGCCTCTCATCAAAATGACCAATATGAGCTCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp AAGCTCGTATCTCAAATTTGGTCCATTTGGTTTGGATaGTGGCTGCCAAGAAATCCCAACATCAGATTCACT +
Preference number: 6 (lower is better)
Translates to: KLVSQIWSIWFG*WLPRNPNIRFT
Trigger: AGTGAATCTGATGTTGGGATTTCTTGGCAGCCACCATCCAAACCAAATGGACCAAATTTGAGATACGAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TCAGAAGCTCGTATCTCAAATTTGGTCCATTTGGTTTaGATGGTGGCTGCCAAGAAATCCCAACATCAGATT +
Preference number: 6 (lower is better)
Translates to: SEARISNLVHLV*MVAAKKSQHQI
Trigger: AATCTGATGTTGGGATTTCTTGGCAGCCACCATCCAAACCAAATGGACCAAATTTGAGATACGAGCTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TCTTCTGTACAATTCAAAGCATATGATTTTTCCATTTaGCTGAAGTGGTCCTGCCCACCACACGGCTACTAT +
Preference number: 6 (lower is better)
Translates to: SSVQFKAYDFSI*LKWSCPPHGYY
Trigger: ATAGTAGCCGTGTGGTGGGCAGGACCACTTCAGCCAAATGGAAAAATCATATGCTTTGAATTGTACAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TACATCTCAGAAGCTCGTATCTCAAATTTGGTCCATTaGGTTTGGATGGTGGCTGCCAAGAAATCCCAACAT +
Preference number: 6 (lower is better)
Translates to: YISEARISNLVH*VWMVAAKKSQH
Trigger: ATGTTGGGATTTCTTGGCAGCCACCATCCAAACCAAATGGACCAAATTTGAGATACGAGCTTCTGAGATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp CTATCTATGAAAGAGTGTGTGTTTACATCTCCAGAATaGACTATTTCCTCTGCTGCAGAACACAGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: LSMKECVFTSPE*TISSAAEHSPS
Trigger: GGAAGGACTGTGTTCTGCAGCAGAGGAAATAGTTCATTCTGGAGATGTAAACACACACTCTTTCATAGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp AAACTCTGGAGGAATTTAAATCCGAAATTGCAGCGATaGCATCTAAGCCCAATAACATTCGCTTTGCACGAG +
Preference number: 6 (lower is better)
Translates to: KLWRNLNPKLQR*HLSPITFALHE
Trigger: CTCGTGCAAAGCGAATGTTATTGGGCTTAGATGCAATCGCTGCAATTTCGGATTTAAATTCCTCCAGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp TCACATCCATCACCATTAAAACTCTGGAGGAATTTAAATCCGAAATaGCAGCGATTGCATCTAAGCCCAATAACATTCGCTTTGCACGAG +
Preference number: 6 (lower is better)
Translates to: SHPSPLKLWRNLNPK*QRLHLSPITFALHE
Trigger: CTCGTGCAAAGCGAATGTTATTGGGCTTAGATGCAATCGCTGCAATTTCGGATTTAAATTCCTCCAGAGTTTTAATGGTGATGGATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp ACTGGAACATCGTGTAGAGGGAAATGTTCAGAAACCATGCTGATCTaGTACCCTATAATTTCTCCTCTTGTAAAGTTTTCTGCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: TGTSCRGKCSETMLI*YPIISPLVKFSAGF
Trigger: GAAGCCAGCAGAAAACTTTACAAGAGGAGAAATTATAGGGTACAAGATCAGCATGGTTTCTGAACATTTCCCTCTACACGATGTTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp GTCTCTTTCTCAGATATTGTAACTTTGAACACAATCTaGCCGTCCACTGTCTTTTCTATCACACACATAGTG +
Preference number: 6 (lower is better)
Translates to: VSFSDIVTLNTI*PSTVFSITHIV
Trigger: CACTATGTGTGTGATAGAAAAGACAGTGGACGGGCAGATTGTGTTCAAAGTTACAATATCTGAGAAAGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TATCTCAAATTTGGTCCATTTGGTTTGGATGGTGGCTaGCAAGAAATCCCAACATCAGATTCACTTAGAAGA +
Preference number: 6 (lower is better)
Translates to: YLKFGPFGLDGG*QEIPTSDSLRR
Trigger: TCTTCTAAGTGAATCTGATGTTGGGATTTCTTGGCAGCCACCATCCAAACCAAATGGACCAAATTTGAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TTTCCGCAAAACGTCATACCCAAGAATGATACCATTTaGATTTGCTGGTGTTGTCCAATCTATTTGAAGGGA +
Preference number: 6 (lower is better)
Translates to: FPQNVIPKNDTI*ICWCCPIYLKG
Trigger: TCCCTTCAAATAGATTGGACAACACCAGCAAATCCAAATGGTATCATTCTTGGGTATGACGTTTTGCGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp AGACAGTTGACAGAATTGGGATTTTCCAAATCTTCATaGTCCTTCATTCCCCAAACACTGCAATTTCTGGCA +
Preference number: 6 (lower is better)
Translates to: RQLTELGFSKSS*SFIPQTLQFLA
Trigger: TGCCAGAAATTGCAGTGTTTGGGGAATGAAGGACAATGAAGATTTGGAAAATCCCAATTCTGTCAACTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 90 bp TCTCCAGAAAAGACCTCTAGAATCTCCCTGTTTGTAAGTGACACATaGTACAATCGAAAATCTTGCATTCTTCCAACAAACTGCTCTGAA +
Preference number: 6 (lower is better)
Translates to: SPEKTSRISLFVSDT*YNRKSCILPTNCSE
Trigger: TTCAGAGCAGTTTGTTGGAAGAATGCAAGATTTTCGATTGTACAATGTGTCACTTACAAACAGGGAGATTCTAGAGGTCTTTTCTGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS TCA 72 bp ATACCATTTGGATTTGCTGGTGTTGTCCAATCTATTTaGAGGGATCTTGAAGTAATACCTCGGATTACAGGT +
Preference number: 6 (lower is better)
Translates to: IPFGFAGVVQSI*RDLEVIPRITG
Trigger: ACCTGTAATCCGAGGTATTACTTCAAGATCCCTTCAAATAGATTGGACAACACCAGCAAATCCAAATGGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CCA 72 bp TTTAAATCTTCTGGGGGATTTGAAGCAAGTGGCTGCTaGATTTTACATCTCAGAAGCTCGTATCTCAAATTT +
Preference number: 6 (lower is better)
Translates to: FKSSGGFEASGC*ILHLRSSYLKF
Trigger: AAATTTGAGATACGAGCTTCTGAGATGTAAAATCCAGCAGCCACTTGCTTCAAATCCCCCAGAAGATTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS CAA 72 bp TCACCATTAAAACTCTGGAGGAATTTAAATCCGAAATaGCAGCGATTGCATCTAAGCCCAATAACATTCGCT +
Preference number: 6 (lower is better)
Translates to: SPLKLWRNLNPK*QRLHLSPITFA
Trigger: AGCGAATGTTATTGGGCTTAGATGCAATCGCTGCAATTTCGGATTTAAATTCCTCCAGAGTTTTAATGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp TTGTACAATCGAAAATCTTGCATTCTTCCAACAAACTaGTCTGAACCATTTAAACTCTGTCCTACTTGTATC +
Preference number: 6 (lower is better)
Translates to: LYNRKSCILPTN*SEPFKLCPTCI
Trigger: GATACAAGTAGGACAGAGTTTAAATGGTTCAGAGCAGTTTGTTGGAAGAATGCAAGATTTTCGATTGTACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14
CDS GCA 72 bp CTGTTTGTAAGTGACACATTGTACAATCGAAAATCTTaGATTCTTCCAACAAACTGCTCTGAACCATTTAAA +
Preference number: 6 (lower is better)
Translates to: LFVSDTLYNRKS*ILPTNCSEPFK
Trigger: TTTAAATGGTTCAGAGCAGTTTGTTGGAAGAATGCAAGATTTTCGATTGTACAATGTGTCACTTACAAACAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000060479.14