Pregenerated sensors for USH1G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045288Ensembl transcript IDs: ENSMUST00000103037.5
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCAGCGTGCAGACTGGGTTTCAGAGGGAAATGACCCTTGCTCCTaGAGAAGGGACAGCTGGAATGGCGATGGTGGGGGCTGGAATGGC | + |
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Preference number: 1 (lower is better) Translates to: PQRADWVSEGNDPCS*RRDSWNGDGGGWNG Trigger: GCCATTCCAGCCCCCACCATCGCCATTCCAGCTGTCCCTTCTTCAGGAGCAAGGGTCATTTCCCTCTGAAACCCAGTCTGCACGCTGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR GCA 90 bp | CCCTCTGCCCAGTCTAGGGAGTTGAAGGAGGAGCTAGAGGCTCTCTaGTCTCCAAGCAAGAGTCTGGGATGGAGACCCACTGCTGACAGG | + |
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Preference number: 1 (lower is better) Translates to: PSAQSRELKEELEAL*SPSKSLGWRPTADR Trigger: CCTGTCAGCAGTGGGTCTCCATCCCAGACTCTTGCTTGGAGAGCAGAGAGCCTCTAGCTCCTCCTTCAACTCCCTAGACTGGGCAGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR TCA 90 bp | GGCTACACCTCTGCCTCAGCGTGCAGACTGGGTTTCAGAGGGAAATaGCCCTTGCTCCTGAAGAAGGGACAGCTGGAATGGCGATGGTGG | + |
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Preference number: 1 (lower is better) Translates to: GYTSASACRLGFRGK*PLLLKKGQLEWRWW Trigger: CCACCATCGCCATTCCAGCTGTCCCTTCTTCAGGAGCAAGGGTCATTTCCCTCTGAAACCCAGTCTGCACGCTGAGGCAGAGGTGTAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR TCA 90 bp | CACACACACACCCAGAAGGCTGGAGAAGACAGGTGGAGGGAGCAGTaGTGGACCTGTGACTGGTCAAGCTCCCTCCTGCTCTATCTCTAC | + |
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Preference number: 1 (lower is better) Translates to: HTHTQKAGEDRWREQ*WTCDWSSSLLLYLY Trigger: GTAGAGATAGAGCAGGAGGGAGCTTGACCAGTCACAGGTCCATCACTGCTCCCTCCACCTGTCTTCTCCAGCCTTCTGGGTGTGTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR TCA 90 bp | TACATCCACCAAGATCTTCCTCACAGAAGGTTCCCACACTGGGCCTaGCACAAACTGTCAAGCCCCTGCCTGTCTAGGCCTGGGAGACAC | + |
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Preference number: 1 (lower is better) Translates to: YIHQDLPHRRFPHWA*HKLSSPCLSRPGRH Trigger: GTGTCTCCCAGGCCTAGACAGGCAGGGGCTTGACAGTTTGTGTCAGGCCCAGTGTGGGAACCTTCTGTGAGGAAGATCTTGGTGGATGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR CCA 90 bp | AGATGGAGCATTTGGCTGAAGAGTCTGACTGGGGAACCTCCTTCTTaGGTGCATGAGGAGGGGGTACCCAAACTCTTCTGTTATAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: RWSIWLKSLTGEPPS*VHEEGVPKLFCYSK Trigger: CTTACTATAACAGAAGAGTTTGGGTACCCCCTCCTCATGCACCCAAGAAGGAGGTTCCCCAGTCAGACTCTTCAGCCAAATGCTCCATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CCA 90 bp | TACAACGGCGAGGGTCACAGCATCTGGCCCACCCCAGGGCAGGGAGAACCAGGAGTCGGCACTTGGAGGTaGCCCCAGGCTTGGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: YNGEGHSIWPTPGQGEPGVGTWR*PQAWAQ Trigger: CTGGGCCCAAGCCTGGGGCCACCTCCAAGTGCCGAC...TCCTGGTTCTCCCTGCCCTGGGGTGGGCCAGATGCTGTGACCCTCGCCGTTGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR GCA 90 bp | TACAACGGCGAGGGTCACAGCATCTGGCCCACCCCAGGGCAGGGAGAACCAGGAGGGTCAATCAGCCCCTaGTCTCCTTCCAGGGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: YNGEGHSIWPTPGQGEPGGSISP*SPSRAD Trigger: GTCAGCCCTGGAAGGAGAGCAGGGGCTGATTGACCC...TCCTGGTTCTCCCTGCCCTGGGGTGGGCCAGATGCTGTGACCCTCGCCGTTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CCA 90 bp | TACAACGGCGAGGGTCACAGCATCTGGCCCACCCCAGGGCAGGGAGAACCAGGACTGGAATGGCGATGGTaGGGGCTGGAATGGCGATGG | + |
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Preference number: 2 (lower is better) Translates to: YNGEGHSIWPTPGQGEPGLEWRW*GLEWRW Trigger: CCATCGCCATTCCAGCCCCCACCATCGCCATTCCAG...TCCTGGTTCTCCCTGCCCTGGGGTGGGCCAGATGCTGTGACCCTCGCCGTTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CCA 90 bp | TACAACGGCGAGGGTCACAGCATCTGGCCCACCCCAGGGCAGGGAGAACCAGGAGGGGAACCTCCTTCTTaGGTGCATGAGGAGGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: YNGEGHSIWPTPGQGEPGGEPPS*VHEEGV Trigger: TACCCCCTCCTCATGCACCCAAGAAGGAGGTTCCCC...TCCTGGTTCTCCCTGCCCTGGGGTGGGCCAGATGCTGTGACCCTCGCCGTTGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CCA 90 bp | TACAACGGCGAGGGTCACAGCATCTGGCCCACCCCAGGGCAGGGAGAACCAGGACAGCCTACCCCAGCATaGCTTTCCAGCTGTGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: YNGEGHSIWPTPGQGEPGQPTPA*LSSCGH Trigger: ATGGCCACAGCTGGAAAGCCATGCTGGGGTAGGCTG...TCCTGGTTCTCCCTGCCCTGGGGTGGGCCAGATGCTGTGACCCTCGCCGTTGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR CAA 90 bp | TGGAATGGCGATGGTGGGGGCTGGAATGGCGATGGTGAGGACCTCTaGGCCCCACCGCGGGTTGTGGCAACTTGCAATTCATTTGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: WNGDGGGWNGDGEDL*APPRVVATCNSFGL Trigger: CAGACCAAATGAATTGCAAGTTGCCACAACCCGCGGTGGGGCCAAGAGGTCCTCACCATCGCCATTCCAGCCCCCACCATCGCCATTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR CAA 90 bp | CCTGGTCCTCTGAAAGCCCTGGGGAGAGAAGGCTTCGTGGTGGAGTaGGATGAAGTTAAAGGAGACAGCCTGGGCCCCCAGAATGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: PGPLKALGREGFVVE*DEVKGDSLGPQNEL Trigger: CAGCTCATTCTGGGGGCCCAGGCTGTCTCCTTTAACTTCATCCAACTCCACCACGAAGCCTTCTCTCCCCAGGGCTTTCAGAGGACCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR GCA 90 bp | AGGACAGTGCACTTCCAGACAGAACACAGAGGTCTCTGGGGGTCTTCCCTCTGCACCTCTGCCTCAGCGTaGAGACTGGGTTTCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: RTVHFQTEHRGLWGSSLCTSASA*RLGFRG Trigger: CCCTCTGAAACCCAGTCTGCACGCTGAGGCAGAGGT...GCAGAGGGAAGACCCCCAGAGACCTCTGTGTTCTGTCTGGAAGTGCACTGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR GCA 90 bp | TCCCACACTGGGCCTGACACAAACTGTCAAGCCCCTGCCTGTCTAGGCCTGGGAGGTCAAGCTCCCTCCTaGTCTATCTCTACCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SHTGPDTNCQAPACLGLGGQAPS*SISTSA Trigger: AGCTGAGGTAGAGATAGAGCAGGAGGGAGCTTGACC...TCCCAGGCCTAGACAGGCAGGGGCTTGACAGTTTGTGTCAGGCCCAGTGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR GCA 90 bp | GTGCACTTCCAGACAGAACACAGAGGTCTCTGGGGGTCTTCCCTCTGCCCAGTCAACCTCCTTCTTGGGTaGATGAGGAGGGGGTACCCA | + |
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Preference number: 2 (lower is better) Translates to: VHFQTEHRGLWGSSLCPVNLLLG*MRRGYP Trigger: TGGGTACCCCCTCCTCATGCACCCAAGAAGGAGGTT...GACTGGGCAGAGGGAAGACCCCCAGAGACCTCTGTGTTCTGTCTGGAAGTGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CCA 90 bp | ATTTGGCTGAAGAGTCTGACTGGGGAACCTCCTTCTTGGGTGCATGAGGAGGGGCAGCTGGAATGGCGATaGTGGGGGCTGGAATGGCGA | + |
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Preference number: 2 (lower is better) Translates to: IWLKSLTGEPPSWVHEEGQLEWR*WGLEWR Trigger: TCGCCATTCCAGCCCCCACCATCGCCATTCCAGCTG...CCCCTCCTCATGCACCCAAGAAGGAGGTTCCCCAGTCAGACTCTTCAGCCAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR CAA 90 bp | GAGAGAGAAAGAGAGAGAGAGGGCGAGAGAGAGAGAGAGAGCGCCTaGGGAGCCTGGGCACAACCAGGATCTCAGGTTCTCTACATCCAC | + |
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Preference number: 2 (lower is better) Translates to: EREREREGERERESA*GAWAQPGSQVLYIH Trigger: GTGGATGTAGAGAACCTGAGATCCTGGTTGTGCCCAGGCTCCCAAGGCGCTCTCTCTCTCTCTCTCGCCCTCTCTCTCTCTTTCTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR CAA 90 bp | AACACAGAGGTCTCTGGGGGTCTTCCCTCTGCCCAGTCTAGGGAGTaGAAGGAGGAGCTAGAGGCTCTCTGCTCTCCAAGCAAGAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: NTEVSGGLPSAQSRE*KEELEALCSPSKSL Trigger: CAGACTCTTGCTTGGAGAGCAGAGAGCCTCTAGCTCCTCCTTCAACTCCCTAGACTGGGCAGAGGGAAGACCCCCAGAGACCTCTGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR TCA 90 bp | TCCCACACTGGGCCTGACACAAACTGTCAAGCCCCTGCCTGTCTAGGCCTGGGAGGTTTCAGAGGGAAATaGCCCTTGCTCCTGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: SHTGPDTNCQAPACLGLGGFRGK*PLLLKK Trigger: CTTCTTCAGGAGCAAGGGTCATTTCCCTCTGAAACC...TCCCAGGCCTAGACAGGCAGGGGCTTGACAGTTTGTGTCAGGCCCAGTGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CCA 90 bp | TACAACGGCGAGGGTCACAGCATCTGGCCCACCCCAGGGCAGGGAGAACCAGGAGAGAAGGCTTCGTGGTaGAGTTGGATGAAGTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: YNGEGHSIWPTPGQGEPGEKASW*SWMKLK Trigger: CTTTAACTTCATCCAACTCCACCACGAAGCCTTCTC...TCCTGGTTCTCCCTGCCCTGGGGTGGGCCAGATGCTGTGACCCTCGCCGTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGCCCCTTCAGATCCTGAGGGAATCTTCTAACCAGACCCAATACAGAGAGAGAGAGAGAGCGCCTTaGGAGCCTGGGCACAACCAG | + |
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Preference number: 2 (lower is better) Translates to: LGPLQILRESSNQTQYRERERAP*EPGHNQ Trigger: CTGGTTGTGCCCAGGCTCCCAAGGCGCTCTCTCTCT...CTCTCTGTATTGGGTCTGGTTAGAAGATTCCCTCAGGATCTGAAGGGGCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGCTGAAGAGTCTGACTGGGGAACCTCCTTCTTGGGTGCATGAGGAGGGGCTCTCCTTCCAGGGCTaGCCCTTCACCAATCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: IWLKSLTGEPPSWVHEEGLSFQG*PFTNPL Trigger: AAGAGGATTGGTGAAGGGTCAGCCCTGGAAGGAGAG...CCCCTCCTCATGCACCCAAGAAGGAGGTTCCCCAGTCAGACTCTTCAGCCAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGATTTCCAGGCCTGGGGGCCACAATTCTGCTGTGCCTTGCATCTAGATCCCAGCCATCAGAAGTGCTaGTCTGGGGTACTGTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: CDFQAWGPQFCCALHLDPSHQKC*SGVLWS Trigger: GGACCACAGTACCCCAGAGCAGCACTTCTGATGGCT...GGGATCTAGATGCAAGGCACAGCAGAATTGTGGCCCCCAGGCCTGGAAATCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CCA 90 bp | CCACCAAGATCTTCCTCACAGAAGGTTCCCACACTGGGCCTGACACAAACTGTCAAGGGACAGCTGGAATaGCGATGGTGGGGGCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PPRSSSQKVPTLGLTQTVKGQLE*RWWGLE Trigger: TTCCAGCCCCCACCATCGCCATTCCAGCTGTCCCTT...GACAGTTTGTGTCAGGCCCAGTGTGGGAACCTTCTGTGAGGAAGATCTTGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR TCA 90 bp | GAGTTGAAGGAGGAGCTAGAGGCTCTCTGCTCTCCAAGCAAGAGTCTGGGATGGGGCCCCTTCAGATCCTaGGGGAATCTTCTAACCAGA | + |
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Preference number: 2 (lower is better) Translates to: ELKEELEALCSPSKSLGWGPFRS*GNLLTR Trigger: TCTGGTTAGAAGATTCCCTCAGGATCTGAAGGGGCC...CCATCCCAGACTCTTGCTTGGAGAGCAGAGAGCCTCTAGCTCCTCCTTCAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR TCA 90 bp | GAGACAAAAGCCACCTCCTCCACACTCAGAACTGGGTGTACAGGACAGTGCACTATGGAGACCCACTGCTaGCAGGAGGGGCAAATCCAT | + |
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Preference number: 2 (lower is better) Translates to: ETKATSSTLRTGCTGQCTMETHC*QEGQIH Trigger: ATGGATTTGCCCCTCCTGTCAGCAGTGGGTCTCCAT...AGTGCACTGTCCTGTACACCCAGTTCTGAGTGTGGAGGAGGTGGCTTTTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR GCA 90 bp | AGGACAGTGCACTTCCAGACAGAACACAGAGGTCTCTGGGGGTCTTCCCTCTGCGCCACAATTCTGCTGTaGCTTGCATCTAGATCCCCT | + |
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Preference number: 2 (lower is better) Translates to: RTVHFQTEHRGLWGSSLCATILL*LASRSP Trigger: AGGGGATCTAGATGCAAGGCACAGCAGAATTGTGGC...GCAGAGGGAAGACCCCCAGAGACCTCTGTGTTCTGTCTGGAAGTGCACTGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR GCA 90 bp | CTGGGGCCCCTTCAGATCCTGAGGGAATCTTCTAACCAGACCCAATACAGAGAGAAACTGTCAAGCCCCTaGCTGTCTAGGCCTGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LGPLQILRESSNQTQYREKLSSP*LSRPGR Trigger: TCTCCCAGGCCTAGACAGGCAGGGGCTTGACAGTTT...CTCTCTGTATTGGGTCTGGTTAGAAGATTCCCTCAGGATCTGAAGGGGCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCCGAGGCAGTAAACAGTCAGAAGAGGTGAGAAAGAACAGTACCTGGGGGCCTCAGCGTGCAGACTaGGTTTCAGAGGGAAATGAC | + |
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Preference number: 2 (lower is better) Translates to: RGRGSKQSEEVRKNSTWGPQRAD*VSEGND Trigger: GTCATTTCCCTCTGAAACCCAGTCTGCACGCTGAGG...CCCCCAGGTACTGTTCTTTCTCACCTCTTCTGACTGTTTACTGCCTCGGCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CCA 90 bp | CTCAAGGTGGTGGTGAGACAAAAGCCACCTCCTCCACACTCAGAACTGGGTGTAACACACCCAGAAGGCTaGAGAAGACAGGTGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LKVVVRQKPPPPHSELGVTHPEG*RRQVEG Trigger: TCCCTCCACCTGTCTTCTCCAGCCTTCTGGGTGTGT...TACACCCAGTTCTGAGTGTGGAGGAGGTGGCTTTTGTCTCACCACCACCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CCA 90 bp | CCACCAAGATCTTCCTCACAGAAGGTTCCCACACTGGGCCTGACACAAACTGTCTTCCAGCTGTGGCCATaGCCAGTGGAGGAAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PPRSSSQKVPTLGLTQTVFQLWP*PVEEKR Trigger: CCTCTTTTCCTCCACTGGCCATGGCCACAGCTGGAA...GACAGTTTGTGTCAGGCCCAGTGTGGGAACCTTCTGTGAGGAAGATCTTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCCGAGGCAGTAAACAGTCAGAAGAGGTGAGAAAGAACAGTACCTGGGGGGGGTGTACAGGACAGTaGACTTCCAGACAGAACACA | + |
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Preference number: 2 (lower is better) Translates to: RGRGSKQSEEVRKNSTWGGCTGQ*TSRQNT Trigger: TGTGTTCTGTCTGGAAGTGCACTGTCCTGTACACCC...CCCCCAGGTACTGTTCTTTCTCACCTCTTCTGACTGTTTACTGCCTCGGCCCCT 53% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR TCA 90 bp | CTCAAGGTGGTGGTGAGACAAAAGCCACCTCCTCCACACTCAGAACTGGGTGTAAATGACCCTTGCTCCTaGAGAAGGGACAGCTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: LKVVVRQKPPPPHSELGVNDPCS*RRDSWN Trigger: ATTCCAGCTGTCCCTTCTTCAGGAGCAAGGGTCATT...TACACCCAGTTCTGAGTGTGGAGGAGGTGGCTTTTGTCTCACCACCACCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR GCA 90 bp | AGAGAAGGCTTCGTGGTGGAGTTGGATGAAGTTAAAGGAGACAGCCTGGGCCCCCGGGTTGTGGCAACTTaGAATTCATTTGGTCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: REGFVVELDEVKGDSLGPRVVAT*NSFGLR Trigger: CCTCAGACCAAATGAATTGCAAGTTGCCACAACCCG...GGGGCCCAGGCTGTCTCCTTTAACTTCATCCAACTCCACCACGAAGCCTTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCTCTATCTCTACCTCAGCTGTGATGTCATCAAGTCCCTCAGGGTCAATCCCCCACCGCGGGTTGTaGCAACTTGCAATTCATTTG | + |
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Preference number: 2 (lower is better) Translates to: SCSISTSAVMSSSPSGSIPHRGL*QLAIHL Trigger: CAAATGAATTGCAAGTTGCCACAACCCGCGGTGGGG...GATTGACCCTGAGGGACTTGATGACATCACAGCTGAGGTAGAGATAGAGCAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CCA 90 bp | CCACCAAGATCTTCCTCACAGAAGGTTCCCACACTGGGCCTGACACAAACTGTCGCTTCGTGGTGGAGTTaGATGAAGTTAAAGGAGACA | + |
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Preference number: 2 (lower is better) Translates to: PPRSSSQKVPTLGLTQTVASWWS*MKLKET Trigger: TGTCTCCTTTAACTTCATCCAACTCCACCACGAAGC...GACAGTTTGTGTCAGGCCCAGTGTGGGAACCTTCTGTGAGGAAGATCTTGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CCA 90 bp | GGATATGACTCTGCATATGTGTGGCTCCTGAAAGACTTAGCCACACCCATAACCGCCTGGGAGACACCATaGCAGTTAACAGGTGCCATT | + |
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Preference number: 2 (lower is better) Translates to: GYDSAYVWLLKDLATPITAWETP*QLTGAI Trigger: AATGGCACCTGTTAACTGCCATGGTGTCTCCCAGGC...GGTTATGGGTGTGGCTAAGTCTTTCAGGAGCCACACATATGCAGAGTCATATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCTCTATCTCTACCTCAGCTGTGATGTCATCAAGTCCCTCAGGGTCAATCAACTTGCAATTCATTTaGTCTGAGGAGAGGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SCSISTSAVMSSSPSGSINLQFI*SEERSS Trigger: AGAGCTCCTCTCCTCAGACCAAATGAATTGCAAGTT...GATTGACCCTGAGGGACTTGATGACATCACAGCTGAGGTAGAGATAGAGCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR TCA 72 bp | CTGGAATGGCGATGGTGGGGGCTGGAATGGCGATGGTaGGGACCTCTTGGCCCCACCGCGGGTTGTGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: LEWRWWGLEWRW*GPLGPTAGCGN Trigger: GTTGCCACAACCCGCGGTGGGGCCAAGAGGTCCTCACCATCGCCATTCCAGCCCCCACCATCGCCATTCCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CAA 90 bp | TACAACGGCGAGGGTCACAGCATCTGGCCCACCCCAGGGCAGGGAGAACCAGGAGAGAGAGAGAGCGCCTaGGGAGCCTGGGCACAACCA | + |
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Preference number: 3 (lower is better) Translates to: YNGEGHSIWPTPGQGEPGERESA*GAWAQP Trigger: TGGTTGTGCCCAGGCTCCCAAGGCGCTCTCTCTCTC...TCCTGGTTCTCCCTGCCCTGGGGTGGGCCAGATGCTGTGACCCTCGCCGTTGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CAA 90 bp | CCCTCAGGGTCAATCAGCCCCTGCTCTCCTTCCAGGGCTGACCCTTCACCAATCGATGGTGAGGACCTCTaGGCCCCACCGCGGGTTGTG | + |
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Preference number: 3 (lower is better) Translates to: PSGSISPCSPSRADPSPIDGEDL*APPRVV Trigger: CACAACCCGCGGTGGGGCCAAGAGGTCCTCACCATC...GATTGGTGAAGGGTCAGCCCTGGAAGGAGAGCAGGGGCTGATTGACCCTGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CAA 90 bp | TACAACGGCGAGGGTCACAGCATCTGGCCCACCCCAGGGCAGGGAGAACCAGGAAAGAAGAGTCGGCACTaGGAGGTGGCCCCAGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: YNGEGHSIWPTPGQGEPGKKSRH*EVAPGL Trigger: CAAGCCTGGGGCCACCTCCAAGTGCCGACTCTTCTT...TCCTGGTTCTCCCTGCCCTGGGGTGGGCCAGATGCTGTGACCCTCGCCGTTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR-3UTR CAA 90 bp | TACAACGGCGAGGGTCACAGCATCTGGCCCACCCCAGGGCAGGGAGAACCAGGAGCCCAGTCTAGGGAGTaGAAGGAGGAGCTAGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: YNGEGHSIWPTPGQGEPGAQSRE*KEELEA Trigger: AGCCTCTAGCTCCTCCTTCAACTCCCTAGACTGGGC...TCCTGGTTCTCCCTGCCCTGGGGTGGGCCAGATGCTGTGACCCTCGCCGTTGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR GCA 72 bp | AAGGTGACTCGGGGCTCCAACAGCCATCAGAAGTGCTaGTCTGGGGTACTGTGGTCCCTCCGGGTGCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: KVTRGSNSHQKC*SGVLWSLRVPQ Trigger: TTGAGGCACCCGGAGGGACCACAGTACCCCAGAGCAGCACTTCTGATGGCTGTTGGAGCCCCGAGTCACCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| 3UTR CCA 72 bp | TCCAACAGCCATCAGAAGTGCTGCTCTGGGGTACTGTaGTCCCTCCGGGTGCCTCAAGGCTACACCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SNSHQKCCSGVL*SLRVPQGYTSA Trigger: GGCAGAGGTGTAGCCTTGAGGCACCCGGAGGGACCACAGTACCCCAGAGCAGCACTTCTGATGGCTGTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR-3UTR CAA 90 bp | TCCCACACTGGGCCTGACACAAACTGTCAAGCCCCTGCCTGTCTAGGCCTGGGACAATTCTGCTGTGCCTaGCATCTAGATCCCCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SHTGPDTNCQAPACLGLGQFCCA*HLDPLV Trigger: GACCAGGGGATCTAGATGCAAGGCACAGCAGAATTG...TCCCAGGCCTAGACAGGCAGGGGCTTGACAGTTTGTGTCAGGCCCAGTGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTGAAGGAGGAGCTAGAGGCTCTCTGCTCTCCAAGCAAGAGTCTGGGATGGTGGCCCCACCGCGGGTaGTGGCAACTTGCAATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: ELKEELEALCSPSKSLGWWPHRG*WQLAIH Trigger: ATGAATTGCAAGTTGCCACAACCCGCGGTGGGGCCA...CCATCCCAGACTCTTGCTTGGAGAGCAGAGAGCCTCTAGCTCCTCCTTCAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR GCA 72 bp | GTGATGTCATCAAGTCCCTCAGGGTCAATCAGCCCCTaGTCTCCTTCCAGGGCTGACCCTTCACCAATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VMSSSPSGSISP*SPSRADPSPIL Trigger: GAGGATTGGTGAAGGGTCAGCCCTGGAAGGAGAGCAGGGGCTGATTGACCCTGAGGGACTTGATGACATCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR CCA 72 bp | CTAGAGGCTCTCTGCTCTCCAAGCAAGAGTCTGGGATaGAGACCCACTGCTGACAGGAGGGGCAAATCCATG | + |
|
Preference number: 3 (lower is better) Translates to: LEALCSPSKSLG*RPTADRRGKSM Trigger: CATGGATTTGCCCCTCCTGTCAGCAGTGGGTCTCCATCCCAGACTCTTGCTTGGAGAGCAGAGAGCCTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR TCA 72 bp | TCTGCCTCAGCGTGCAGACTGGGTTTCAGAGGGAAATaGCCCTTGCTCCTGAAGAAGGGACAGCTGGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: SASACRLGFRGK*PLLLKKGQLEW Trigger: CCATTCCAGCTGTCCCTTCTTCAGGAGCAAGGGTCATTTCCCTCTGAAACCCAGTCTGCACGCTGAGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR TCA 72 bp | TGGAGAAGACAGGTGGAGGGAGCAGTGATGGACCTGTaGCTGGTCAAGCTCCCTCCTGCTCTATCTCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: WRRQVEGAVMDL*LVKLPPALSLP Trigger: AGGTAGAGATAGAGCAGGAGGGAGCTTGACCAGTCACAGGTCCATCACTGCTCCCTCCACCTGTCTTCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR TCA 72 bp | CAAGATCTTCCTCACAGAAGGTTCCCACACTGGGCCTaGCACAAACTGTCAAGCCCCTGCCTGTCTAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QDLPHRRFPHWA*HKLSSPCLSRP Trigger: AGGCCTAGACAGGCAGGGGCTTGACAGTTTGTGTCAGGCCCAGTGTGGGAACCTTCTGTGAGGAAGATCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR GCA 72 bp | ACCTCCTCCACACTCAGAACTGGGTGTACAGGACAGTaGACTTCCAGACAGAACACAGAGGTCTCTGGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TSSTLRTGCTGQ*TSRQNTEVSGG Trigger: ACCCCCAGAGACCTCTGTGTTCTGTCTGGAAGTGCACTGTCCTGTACACCCAGTTCTGAGTGTGGAGGAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR TCA 72 bp | GTCAAGCTCCCTCCTGCTCTATCTCTACCTCAGCTGTaGTGTCATCAAGTCCCTCAGGGTCAATCAGCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: VKLPPALSLPQL*CHQVPQGQSAP Trigger: AGGGGCTGATTGACCCTGAGGGACTTGATGACATCACAGCTGAGGTAGAGATAGAGCAGGAGGGAGCTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR TCA 72 bp | CTCTCCAAGCAAGAGTCTGGGATGGAGACCCACTGCTaGCAGGAGGGGCAAATCCATGGAAGGATGGATATG | + |
|
Preference number: 3 (lower is better) Translates to: LSKQESGMETHC*QEGQIHGRMDM Trigger: CATATCCATCCTTCCATGGATTTGCCCCTCCTGTCAGCAGTGGGTCTCCATCCCAGACTCTTGCTTGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGCCGAGGCAGTAAACAGTCAGAAGAGGTGAGAAAGAACAGTACCTGGGGGGGAAAGATGGAGCATTaGGCTGAAGAGTCTGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: RGRGSKQSEEVRKNSTWGGKMEH*AEESDW Trigger: CCAGTCAGACTCTTCAGCCAAATGCTCCATCTTTCC...CCCCCAGGTACTGTTCTTTCTCACCTCTTCTGACTGTTTACTGCCTCGGCCCCT 53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR CCA 72 bp | ATTTGGCTGAAGAGTCTGACTGGGGAACCTCCTTCTTaGGTGCATGAGGAGGGGGTACCCAAACTCTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: IWLKSLTGEPPS*VHEEGVPKLFC Trigger: ACAGAAGAGTTTGGGTACCCCCTCCTCATGCACCCAAGAAGGAGGTTCCCCAGTCAGACTCTTCAGCCAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR CCA 72 bp | GTGCCATTCTACAGCCAGATGTGTGATTTCCAGGCCTaGGGGCCACAATTCTGCTGTGCCTTGCATCTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VPFYSQMCDFQA*GPQFCCALHLD Trigger: ATCTAGATGCAAGGCACAGCAGAATTGTGGCCCCCAGGCCTGGAAATCACACATCTGGCTGTAGAATGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR CCA 72 bp | GATGGAGACCCACTGCTGACAGGAGGGGCAAATCCATaGAAGGATGGATATGACTCTGCATATGTGTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: DGDPLLTGGANP*KDGYDSAYVWL Trigger: GAGCCACACATATGCAGAGTCATATCCATCCTTCCATGGATTTGCCCCTCCTGTCAGCAGTGGGTCTCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR CCA 72 bp | CTGTACCAAAAATATAATCAGCCTGAGGGAAGGGTTTaGGGTACAACGGCGAGGGTCACAGCATCTGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LYQKYNQPEGRV*GTTARVTASGP Trigger: TGGGCCAGATGCTGTGACCCTCGCCGTTGTACCCCAAACCCTTCCCTCAGGCTGATTATATTTTTGGTACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAGGTGGTGGTGAGACAAAAGCCACCTCCTCCACACTCAGAACTGGGTGTAGCGGGTTGTGGCAACTaGCAATTCATTTGGTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LKVVVRQKPPPPHSELGVAGCGN*QFIWSE Trigger: CTCAGACCAAATGAATTGCAAGTTGCCACAACCCGC...TACACCCAGTTCTGAGTGTGGAGGAGGTGGCTTTTGTCTCACCACCACCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR-3UTR CAA 90 bp | GGATATGACTCTGCATATGTGTGGCTCCTGAAAGACTTAGCCACACCCATAACCGGCTTCGTGGTGGAGTaGGATGAAGTTAAAGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GYDSAYVWLLKDLATPITGFVVE*DEVKGD Trigger: GTCTCCTTTAACTTCATCCAACTCCACCACGAAGCC...GGTTATGGGTGTGGCTAAGTCTTTCAGGAGCCACACATATGCAGAGTCATATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR TCA 90 bp | TACAACGGCGAGGGTCACAGCATCTGGCCCACCCCAGGGCAGGGAGAACCAGGAGGCCTGAGTCGGTGCTaGCCTCCGAGTGAGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YNGEGHSIWPTPGQGEPGGLSRC*PPSEQA Trigger: AGCCTGCTCACTCGGAGGTCAGCACCGACTCAGGCC...TCCTGGTTCTCCCTGCCCTGGGGTGGGCCAGATGCTGTGACCCTCGCCGTTGTA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | CCCTCAGGGTCAATCAGCCCCTGCTCTCCTTCCAGGGCTGACCCTTCACCAATCACCCCGCGGCGTGCCTaGCCCATCCAAACCCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSGSISPCSPSRADPSPITPRRA*PIQTPV Trigger: GACGGGGGTTTGGATGGGGCAGGCACGCCGCGGGGT...GATTGGTGAAGGGTCAGCCCTGGAAGGAGAGCAGGGGCTGATTGACCCTGAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | TCCCACACTGGGCCTGACACAAACTGTCAAGCCCCTGCCTGTCTAGGCCTGGGAGCGGATGCGCCGCTCTaGCTCGCGGAAGGCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SHTGPDTNCQAPACLGLGADAPL*LAEGLV Trigger: GACAAGGCCTTCCGCGAGGCAGAGCGGCGCATCCGC...TCCCAGGCCTAGACAGGCAGGGGCTTGACAGTTTGTGTCAGGCCCAGTGTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR CCA 90 bp | CCCTCAGGGTCAATCAGCCCCTGCTCTCCTTCCAGGGCTGACCCTTCACCAATCCCGTACCGTGCAGCGTaGCCTGCGAGTAGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSGSISPCSPSRADPSPIPYRAA*PASRAA Trigger: AGCTGCCCTACTCGCAGGCCACGCTGCACGGTACGG...GATTGGTGAAGGGTCAGCCCTGGAAGGAGAGCAGGGGCTGATTGACCCTGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR CCA 90 bp | TCCCACACTGGGCCTGACACAAACTGTCAAGCCCCTGCCTGTCTAGGCCTGGGACCCACTCCTTGGGGTTaGCGTAGGTGCCCTGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHTGPDTNCQAPACLGLGPTPWG*RRCPGA Trigger: TGCGCCAGGGCACCTACGCCAACCCCAAGGAGTGGG...TCCCAGGCCTAGACAGGCAGGGGCTTGACAGTTTGTGTCAGGCCCAGTGTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR TCA 90 bp | CTCGGGGCTCCAACAGCCATCAGAAGTGCTGCTCTGGGGTACTGTGGTCCCTCCCAAAGAGTCGTGGCCTaGGTCGGTGCTGACCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LGAPTAIRSAALGYCGPSQRVVA*VGADLR Trigger: TCGGAGGTCAGCACCGACTCAGGCCACGACTCTTTG...GGAGGGACCACAGTACCCCAGAGCAGCACTTCTGATGGCTGTTGGAGCCCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | CTCGGGGCTCCAACAGCCATCAGAAGTGCTGCTCTGGGGTACTGTGGTCCCTCCTGCGCTCGTGGTGCTTaGGCTGCATCTTGGCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LGAPTAIRSAALGYCGPSCARGA*AASWRT Trigger: AGTGCGCCAAGATGCAGCGCAAGCACCACGAGCGCA...GGAGGGACCACAGTACCCCAGAGCAGCACTTCTGATGGCTGTTGGAGCCCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | GAGACAAAAGCCACCTCCTCCACACTCAGAACTGGGTGTACAGGACAGTGCACTGCCGACCCCGCGGCGTaGCTGCCCCATCCAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: ETKATSSTLRTGCTGQCTADPAA*LPHPNP Trigger: GGGGTTTGGATGGGGCAGGCACGCCGCGGGGTCGGC...AGTGCACTGTCCTGTACACCCAGTTCTGAGTGTGGAGGAGGTGGCTTTTGTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | GAGACAAAAGCCACCTCCTCCACACTCAGAACTGGGTGTACAGGACAGTGCACTTGGCGCACTCGCGGATaGGCCGCTCTGCCTCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ETKATSSTLRTGCTGQCTWRTRG*AALPRG Trigger: TCCGCGAGGCAGAGCGGCGCATCCGCGAGTGCGCCA...AGTGCACTGTCCTGTACACCCAGTTCTGAGTGTGGAGGAGGTGGCTTTTGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR CAA 72 bp | GATGGTGGGGGCTGGAATGGCGATGGTGAGGACCTCTaGGCCCCACCGCGGGTTGTGGCAACTTGCAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: DGGGWNGDGEDL*APPRVVATCNS Trigger: TGAATTGCAAGTTGCCACAACCCGCGGTGGGGCCAAGAGGTCCTCACCATCGCCATTCCAGCCCCCACCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR TCA 90 bp | ATTTGGCTGAAGAGTCTGACTGGGGAACCTCCTTCTTGGGTGCATGAGGAGGGGCCCCGCGGCTCACAATaGGGCGCAGAGACTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IWLKSLTGEPPSWVHEEGPRGSQ*GAETPG Trigger: ACCTGGAGTCTCTGCGCCTCATTGTGAGCCGCGGGG...CCCCTCCTCATGCACCCAAGAAGGAGGTTCCCCAGTCAGACTCTTCAGCCAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | GGGAGAGAAGGCTTCGTGGTGGAGTTGGATGAAGTTAAAGGAGACAGCCTGGGCCCCAGCGTCATGTGCTaGAGCCGTCGGCTCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GREGFVVELDEVKGDSLGPSVMC*SRRLRV Trigger: CACCCTGAGCCGACGGCTGCAGCACATGACGCTGGG...GCCCAGGCTGTCTCCTTTAACTTCATCCAACTCCACCACGAAGCCTTCTCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | CCCTCAGGGTCAATCAGCCCCTGCTCTCCTTCCAGGGCTGACCCTTCACCAATCGCAAGCTGTTGGCACTaGCTAGGCTGTCGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSGSISPCSPSRADPSPIASCWH*LGCRRP Trigger: TGGACGACGACAGCCTAGGCAGTGCCAACAGCTTGC...GATTGGTGAAGGGTCAGCCCTGGAAGGAGAGCAGGGGCTGATTGACCCTGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCGAGGCAGTAAACAGTCAGAAGAGGTGAGAAAGAACAGTACCTGGGGGGCTCGGCAGCCAGTGTaGCACGGGAGACGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGRGSKQSEEVRKNSTWGARQPV*HGRRCP Trigger: AGGACAGCGTCTCCCGTGCCACACTGGCTGCCGAGC...CCCCCAGGTACTGTTCTTTCTCACCTCTTCTGACTGTTTACTGCCTCGGCCCCT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| 3UTR CAA 72 bp | AGAGAGAGAGAGGGCGAGAGAGAGAGAGAGAGCGCCTaGGGAGCCTGGGCACAACCAGGATCTCAGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: REREGERERESA*GAWAQPGSQVL Trigger: GAGAACCTGAGATCCTGGTTGTGCCCAGGCTCCCAAGGCGCTCTCTCTCTCTCTCTCGCCCTCTCTCTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | GTGCACTTCCAGACAGAACACAGAGGTCTCTGGGGGTCTTCCCTCTGCCCAGTCGCAGAGACTCCAGGTTaGCATGGTAGGCAGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VHFQTEHRGLWGSSLCPVAETPG*HGRQPR Trigger: TCTGGGCTGCCTACCATGGCAACCTGGAGTCTCTGC...GACTGGGCAGAGGGAAGACCCCCAGAGACCTCTGTGTTCTGTCTGGAAGTGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | AGGACAGTGCACTTCCAGACAGAACACAGAGGTCTCTGGGGGTCTTCCCTCTGCGGGTTGAGGCTGCTCTaGTTGGCCGCGATGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: RTVHFQTEHRGLWGSSLCGLRLL*LAAMES Trigger: GGATTCCATCGCGGCCAAGCAGAGCAGCCTCAACCC...GCAGAGGGAAGACCCCCAGAGACCTCTGTGTTCTGTCTGGAAGTGCACTGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | GAGACAAAAGCCACCTCCTCCACACTCAGAACTGGGTGTACAGGACAGTGCACTGGTAGCGCCGCTCCATaGGCTCGTGGTGCTTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETKATSSTLRTGCTGQCTGSAAP*ARGACA Trigger: AGCGCAAGCACCACGAGCGCATGGAGCGGCGCTACC...AGTGCACTGTCCTGTACACCCAGTTCTGAGTGTGGAGGAGGTGGCTTTTGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR CCA 90 bp | GAGTTGAAGGAGGAGCTAGAGGCTCTCTGCTCTCCAAGCAAGAGTCTGGGATGGTCTTGGCCTTGCCCTTaGCCGTACCGTGCAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELKEELEALCSPSKSLGWSWPCP*PYRAAW Trigger: CCACGCTGCACGGTACGGCCAAGGGCAAGGCCAAGA...CCATCCCAGACTCTTGCTTGGAGAGCAGAGAGCCTCTAGCTCCTCCTTCAACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR CCA 90 bp | GGGAGAGAAGGCTTCGTGGTGGAGTTGGATGAAGTTAAAGGAGACAGCCTGGGCTCCTTCGAAACACCATaGTACCCAGGCCGGGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GREGFVVELDEVKGDSLGSFETP*YPGRGG Trigger: CCCGCCCCGGCCTGGGTACCATGGTGTTTCGAAGGA...GCCCAGGCTGTCTCCTTTAACTTCATCCAACTCCACCACGAAGCCTTCTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCCCCTTCAGATCCTGAGGGAATCTTCTAACCAGACCCAATACAGAGAGTCGTGGTGCTTGCGCTaGATCTTGGCGCACTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGPLQILRESSNQTQYRESWCLR*ILAHSR Trigger: CCGCGAGTGCGCCAAGATGCAGCGCAAGCACCACGA...CTCTCTGTATTGGGTCTGGTTAGAAGATTCCCTCAGGATCTGAAGGGGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | AGGACAGTGCACTTCCAGACAGAACACAGAGGTCTCTGGGGGTCTTCCCTCTGCTGGGGTTGGCGTAGGTaGCCTGGCGCACAAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: RTVHFQTEHRGLWGSSLCWGWRR*PGAQTS Trigger: TGATGTTTGTGCGCCAGGGCACCTACGCCAACCCCA...GCAGAGGGAAGACCCCCAGAGACCTCTGTGTTCTGTCTGGAAGTGCACTGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR CCA 90 bp | GTGCACTTCCAGACAGAACACAGAGGTCTCTGGGGGTCTTCCCTCTGCCCAGTCGCTTCTTCTGGATCTTaGCCTTGCCCTTGGCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VHFQTEHRGLWGSSLCPVASSGS*PCPWPY Trigger: GTACGGCCAAGGGCAAGGCCAAGATCCAGAAGAAGC...GACTGGGCAGAGGGAAGACCCCCAGAGACCTCTGTGTTCTGTCTGGAAGTGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR TCA 90 bp | GAGTTGAAGGAGGAGCTAGAGGCTCTCTGCTCTCCAAGCAAGAGTCTGGGATGGTCCGGGTGGCCTCCTTaGGGAGTTCCAGATAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ELKEELEALCSPSKSLGWSGWPP*GVPDSH Trigger: ATGGCTATCTGGAACTCCTCAAGGAGGCCACCCGGA...CCATCCCAGACTCTTGCTTGGAGAGCAGAGAGCCTCTAGCTCCTCCTTCAACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | TCCCACACTGGGCCTGACACAAACTGTCAAGCCCCTGCCTGTCTAGGCCTGGGAGTGACCATTGGAAGCTaGCAGATGCAAGGGTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHTGPDTNCQAPACLGLGVTIGS*QMQGCV Trigger: AACACACCCTTGCATCTGGCAGCTTCCAATGGTCAC...TCCCAGGCCTAGACAGGCAGGGGCTTGACAGTTTGTGTCAGGCCCAGTGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | GGATATGACTCTGCATATGTGTGGCTCCTGAAAGACTTAGCCACACCCATAACCAGGCTGGGGGAACTATaGAGCCGACCCCGCGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GYDSAYVWLLKDLATPITRLGEL*SRPRGV Trigger: CACGCCGCGGGGTCGGCTGCATAGTTCCCCCAGCCT...GGTTATGGGTGTGGCTAAGTCTTTCAGGAGCCACACATATGCAGAGTCATATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | GAGACAAAAGCCACCTCCTCCACACTCAGAACTGGGTGTACAGGACAGTGCACTCCGCAACTGCGGTCCTaGAAGCTGTTGGCACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ETKATSSTLRTGCTGQCTPQLRS*KLLALP Trigger: AGGCAGTGCCAACAGCTTGCAGGACCGCAGTTGCGG...AGTGCACTGTCCTGTACACCCAGTTCTGAGTGTGGAGGAGGTGGCTTTTGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR CCA 90 bp | GAGACAAAAGCCACCTCCTCCACACTCAGAACTGGGTGTACAGGACAGTGCACTCGCTCCATGCGCTCGTaGTGCTTGCGCTGCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ETKATSSTLRTGCTGQCTRSMRS*CLRCIL Trigger: CAAGATGCAGCGCAAGCACCACGAGCGCATGGAGCG...AGTGCACTGTCCTGTACACCCAGTTCTGAGTGTGGAGGAGGTGGCTTTTGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR TCA 90 bp | GGATATGACTCTGCATATGTGTGGCTCCTGAAAGACTTAGCCACACCCATAACCCCACCAGCTTGGGGTTaGGGCTGCTCTGCTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GYDSAYVWLLKDLATPITPPAWG*GCSAWP Trigger: CGGCCAAGCAGAGCAGCCTCAACCCCAAGCTGGTGG...GGTTATGGGTGTGGCTAAGTCTTTCAGGAGCCACACATATGCAGAGTCATATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
||
| CDS-3UTR GCA 90 bp | AGGGGCCGAGGCAGTAAACAGTCAGAAGAGGTGAGAAAGAACAGTACCTGGGGGGCAAAGTCTTCCATGTaGAGCGAGGCCAGGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGRGSKQSEEVRKNSTWGAKSSM*SEARKV Trigger: GACCTTCCTGGCCTCGCTGCACATGGAAGACTTTGC...CCCCCAGGTACTGTTCTTTCTCACCTCTTCTGACTGTTTACTGCCTCGGCCCCT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR CCA 90 bp | ATTTGGCTGAAGAGTCTGACTGGGGAACCTCCTTCTTGGGTGCATGAGGAGGGGAGCGGCCATGTCCAGTaGCGTGTGGTAGTCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IWLKSLTGEPPSWVHEEGSGHVQ*RVVVIV Trigger: GACAATGACTACCACACGCCACTGGACATGGCCGCT...CCCCTCCTCATGCACCCAAGAAGGAGGTTCCCCAGTCAGACTCTTCAGCCAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR CCA 90 bp | GGATATGACTCTGCATATGTGTGGCTCCTGAAAGACTTAGCCACACCCATAACCGCTTGCGCTGCATCTTaGCGCACTCGCGGATGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GYDSAYVWLLKDLATPITACAAS*RTRGCA Trigger: GGCGCATCCGCGAGTGCGCCAAGATGCAGCGCAAGC...GGTTATGGGTGTGGCTAAGTCTTTCAGGAGCCACACATATGCAGAGTCATATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR TCA 90 bp | GGATATGACTCTGCATATGTGTGGCTCCTGAAAGACTTAGCCACACCCATAACCAGAGGAACATGTCCCTaGGTGGGGCACGGCCCCACT | + |
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Preference number: 4 (lower is better) Translates to: GYDSAYVWLLKDLATPITRGTCP*VGHGPT Trigger: AGTGGGGCCGTGCCCCACTCAGGGACATGTTCCTCT...GGTTATGGGTGTGGCTAAGTCTTTCAGGAGCCACACATATGCAGAGTCATATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR GCA 90 bp | GATGGTGAGGACCTCTTGGCCCCACCGCGGGTTGTGGCAACTTGCAATTCATTTTTGGAAGCTGCCAGATaGAAGGGTGTGTTTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: DGEDLLAPPRVVATCNSFLEAAR*KGVFPQ Trigger: CTGGGGAAACACACCCTTGCATCTGGCAGCTTCCAA...AAATGAATTGCAAGTTGCCACAACCCGCGGTGGGGCCAAGAGGTCCTCACCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR CCA 90 bp | GAGACAAAAGCCACCTCCTCCACACTCAGAACTGGGTGTACAGGACAGTGCACTTCTGCTTGGCCGCGATaGAATCCAGATAGCGTACGC | + |
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Preference number: 4 (lower is better) Translates to: ETKATSSTLRTGCTGQCTSAWPR*NPDSVR Trigger: GCGTACGCTATCTGGATTCCATCGCGGCCAAGCAGA...AGTGCACTGTCCTGTACACCCAGTTCTGAGTGTGGAGGAGGTGGCTTTTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR CCA 90 bp | CCACCAAGATCTTCCTCACAGAAGGTTCCCACACTGGGCCTGACACAAACTGTCAGTGCAGGTGACCATTaGAAGCTGCCAGATGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPRSSSQKVPTLGLTQTVSAGDH*KLPDAR Trigger: CCTTGCATCTGGCAGCTTCCAATGGTCACCTGCACT...GACAGTTTGTGTCAGGCCCAGTGTGGGAACCTTCTGTGAGGAAGATCTTGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR CCA 90 bp | GGATATGACTCTGCATATGTGTGGCTCCTGAAAGACTTAGCCACACCCATAACCCCAGGCACCAGATGTTaGCCCCGAAGGAGACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GYDSAYVWLLKDLATPITPGTRC*PRRRRG Trigger: TCCTCGTCTCCTTCGGGGCCAACATCTGGTGCCTGG...GGTTATGGGTGTGGCTAAGTCTTTCAGGAGCCACACATATGCAGAGTCATATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR CCA 90 bp | GGATATGACTCTGCATATGTGTGGCTCCTGAAAGACTTAGCCACACCCATAACCTGTCGTCGTCCAGGCTaGGGGAACTATGCAGCCGAC | + |
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Preference number: 4 (lower is better) Translates to: GYDSAYVWLLKDLATPITCRRPG*GNYAAD Trigger: GTCGGCTGCATAGTTCCCCCAGCCTGGACGACGACA...GGTTATGGGTGTGGCTAAGTCTTTCAGGAGCCACACATATGCAGAGTCATATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR CCA 90 bp | GGATATGACTCTGCATATGTGTGGCTCCTGAAAGACTTAGCCACACCCATAACCGTAAACAAAGAGTCGTaGCCTGAGTCGGTGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: GYDSAYVWLLKDLATPITVNKES*PESVLT Trigger: GGTCAGCACCGACTCAGGCCACGACTCTTTGTTTAC...GGTTATGGGTGTGGCTAAGTCTTTCAGGAGCCACACATATGCAGAGTCATATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS GCA 90 bp | CGGCCAGCTCGCGCCGGTAGCGCCGCTCCATGCGCTCGTGGTGCTTaGGCTGCATCTTGGCGCACTCGCGGATGCGCCGCTCTGCCTCGC | + |
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Preference number: 5 (lower is better) Translates to: RPARAGSAAPCARGA*AASWRTRGCAALPR Trigger: GCGAGGCAGAGCGGCGCATCCGCGAGTGCGCCAAGATGCAGCGCAAGCACCACGAGCGCATGGAGCGGCGCTACCGGCGCGAGCTGGCCG 73% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS GCA 90 bp | GAGTGTCGGAGCGCTCGGCCAGCTCGCGCCGGTAGCGCCGCTCCATaGGCTCGTGGTGCTTGCGCTGCATCTTGGCGCACTCGCGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: ECRSARPARAGSAAP*ARGACAASWRTRGC Trigger: GCATCCGCGAGTGCGCCAAGATGCAGCGCAAGCACCACGAGCGCATGGAGCGGCGCTACCGGCGCGAGCTGGCCGAGCGCTCCGACACTC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS GCA 90 bp | CCTTGGCCGTACCGTGCAGCGTGGCCTGCGAGTAGGGCAGCTGGCTaGCCAGCGTCATGTGCTGCAGCCGTCGGCTCAGGGTGCTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: PWPYRAAWPASRAAG*PASCAAAVGSGCWT Trigger: CGTCCAGCACCCTGAGCCGACGGCTGCAGCACATGACGCTGGGCAGCCAGCTGCCCTACTCGCAGGCCACGCTGCACGGTACGGCCAAGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CCA 90 bp | GCCGGTAGCGCCGCTCCATGCGCTCGTGGTGCTTGCGCTGCATCTTaGCGCACTCGCGGATGCGCCGCTCTGCCTCGCGGAAGGCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: AGSAAPCARGACAAS*RTRGCAALPRGRPC Trigger: ACAAGGCCTTCCGCGAGGCAGAGCGGCGCATCCGCGAGTGCGCCAAGATGCAGCGCAAGCACCACGAGCGCATGGAGCGGCGCTACCGGC 70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CCA 90 bp | GGCACGGGAGACGCTGTCCTCGTCCGAGAGGAACATGTCCCTGAGTaGGGCACGGCCCCACTCCTTGGGGTTGGCGTAGGTGCCCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GTGDAVLVREEHVPE*GTAPLLGVGVGALA Trigger: CGCCAGGGCACCTACGCCAACCCCAAGGAGTGGGGCCGTGCCCCACTCAGGGACATGTTCCTCTCGGACGAGGACAGCGTCTCCCGTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS GCA 90 bp | GTGGTGCTTGCGCTGCATCTTGGCGCACTCGCGGATGCGCCGCTCTaGCTCGCGGAAGGCCTTGTCCTTCAGCTTGCCCACCAGCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: VVLALHLGALADAPL*LAEGLVLQLAHQLG Trigger: CCCAAGCTGGTGGGCAAGCTGAAGGACAAGGCCTTCCGCGAGGCAGAGCGGCGCATCCGCGAGTGCGCCAAGATGCAGCGCAAGCACCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS GCA 90 bp | CCATGCGCTCGTGGTGCTTGCGCTGCATCTTGGCGCACTCGCGGATaGGCCGCTCTGCCTCGCGGAAGGCCTTGTCCTTCAGCTTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PCARGACAASWRTRG*AALPRGRPCPSACP Trigger: TGGGCAAGCTGAAGGACAAGGCCTTCCGCGAGGCAGAGCGGCGCATCCGCGAGTGCGCCAAGATGCAGCGCAAGCACCACGAGCGCATGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CCA 90 bp | CCTGCTTGCGCCTCTCCAGCTTCTTCTGGATCTTGGCCTTGCCCTTaGCCGTACCGTGCAGCGTGGCCTGCGAGTAGGGCAGCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PACASPASSGSWPCP*PYRAAWPASRAAGC Trigger: GCAGCCAGCTGCCCTACTCGCAGGCCACGCTGCACGGTACGGCCAAGGGCAAGGCCAAGATCCAGAAGAAGCTGGAGAGGCGCAAGCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS TCA 90 bp | CGGGTAAACAAAGAGTCGTGGCCTGAGTCGGTGCTGACCTCCGAGTaGGCAGGCTCGGCAGCCAGTGTGGCACGGGAGACGCTGTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: RVNKESWPESVLTSE*AGSAASVARETLSS Trigger: CGAGGACAGCGTCTCCCGTGCCACACTGGCTGCCGAGCCTGCTCACTCGGAGGTCAGCACCGACTCAGGCCACGACTCTTTGTTTACCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS TCA 90 bp | CACCATGGTACCCAGGCCGGGGCGGGTAAACAAAGAGTCGTGGCCTaGGTCGGTGCTGACCTCCGAGTGAGCAGGCTCGGCAGCCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: HHGTQAGAGKQRVVA*VGADLRVSRLGSQC Trigger: ACACTGGCTGCCGAGCCTGCTCACTCGGAGGTCAGCACCGACTCAGGCCACGACTCTTTGTTTACCCGCCCCGGCCTGGGTACCATGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CCA 90 bp | GCTTCTTCTGGATCTTGGCCTTGCCCTTGGCCGTACCGTGCAGCGTaGCCTGCGAGTAGGGCAGCTGGCTGCCCAGCGTCATGTGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: ASSGSWPCPWPYRAA*PASRAAGCPASCAA Trigger: TGCAGCACATGACGCTGGGCAGCCAGCTGCCCTACTCGCAGGCCACGCTGCACGGTACGGCCAAGGGCAAGGCCAAGATCCAGAAGAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS GCA 90 bp | AAGTCTAGCTCATCCCAGGGCAGCTCTTCCCCGCAACTGCGGTCCTaGAAGCTGTTGGCACTGCCTAGGCTGTCGTCGTCCAGGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: KSSSSQGSSSPQLRS*KLLALPRLSSSRLG Trigger: CCCCAGCCTGGACGACGACAGCCTAGGCAGTGCCAACAGCTTGCAGGACCGCAGTTGCGGGGAAGAGCTGCCCTGGGATGAGCTAGACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CCA 90 bp | CATCCCAGGGCAGCTCTTCCCCGCAACTGCGGTCCTGCAAGCTGTTaGCACTGCCTAGGCTGTCGTCGTCCAGGCTGGGGGAACTATGCA | + |
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Preference number: 5 (lower is better) Translates to: HPRAALPRNCGPASC*HCLGCRRPGWGNYA Trigger: TGCATAGTTCCCCCAGCCTGGACGACGACAGCCTAGGCAGTGCCAACAGCTTGCAGGACCGCAGTTGCGGGGAAGAGCTGCCCTGGGATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS TCA 90 bp | TGCCATCCTCGTCAGGGGCATTCAGCTCCTTCCGGGTGGCCTCCTTaGGGAGTTCCAGATAGCCATCCCTGGCGGCCCGGTGATACTGGT | + |
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Preference number: 5 (lower is better) Translates to: CHPRQGHSAPSGWPP*GVPDSHPWRPGDTG Trigger: ACCAGTATCACCGGGCCGCCAGGGATGGCTATCTGGAACTCCTCAAGGAGGCCACCCGGAAGGAGCTGAATGCCCCTGACGAGGATGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS GCA 90 bp | AGGTCAATCTTCTCGTGCCGCAGGAGAGAGGCAAAGTCTTCCATGTaGAGCGAGGCCAGGAAGGTCTCCAAGGGGCTGGTCTCGGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: RSIFSCRRREAKSSM*SEARKVSKGLVSGS Trigger: GGAGCCCGAGACCAGCCCCTTGGAGACCTTCCTGGCCTCGCTGCACATGGAAGACTTTGCCTCTCTCCTGCGGCACGAGAAGATTGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR CAA 90 bp | TGTGATTTCCAGGCCTGGGGGCCACAATTCTGCTGTGCCTTGCATCTAGATCCCTGCTTGCGCTGCATCTaGGCGCACTCGCGGATGCGC | + |
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Preference number: 5 (lower is better) Translates to: CDFQAWGPQFCCALHLDPCLRCI*AHSRMR Trigger: GCGCATCCGCGAGTGCGCCAAGATGCAGCGCAAGCA...GGGATCTAGATGCAAGGCACAGCAGAATTGTGGCCCCCAGGCCTGGAAATCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS GCA 90 bp | TCCAGGTCAGAGCACAGCATCAGAGCCTCCAGGTCAATCTTCTCGTaGCGCAGGAGAGAGGCAAAGTCTTCCATGTGCAGCGAGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SRSEHSIRASRSIFS*RRREAKSSMCSEAR Trigger: CCTGGCCTCGCTGCACATGGAAGACTTTGCCTCTCTCCTGCGGCACGAGAAGATTGACCTGGAGGCTCTGATGCTGTGCTCTGACCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CCA 90 bp | CCATGTCCAGTGGCGTGTGGTAGTCATTGTCCAGGCACCAGATGTTaGCCCCGAAGGAGACGAGGAAGGACAGGCAGTGCAGGTGACCAT | + |
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Preference number: 5 (lower is better) Translates to: PCPVACGSHCPGTRC*PRRRRGRTGSAGDH Trigger: ATGGTCACCTGCACTGCCTGTCCTTCCTCGTCTCCTTCGGGGCCAACATCTGGTGCCTGGACAATGACTACCACACGCCACTGGACATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR CAA 90 bp | TGTGATTTCCAGGCCTGGGGGCCACAATTCTGCTGTGCCTTGCATCTAGATCCCTCCAGGCACCAGATGTaGGCCCCGAAGGAGACGAGG | + |
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Preference number: 5 (lower is better) Translates to: CDFQAWGPQFCCALHLDPSRHQM*APKETR Trigger: CCTCGTCTCCTTCGGGGCCAACATCTGGTGCCTGGA...GGGATCTAGATGCAAGGCACAGCAGAATTGTGGCCCCCAGGCCTGGAAATCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR CAA 90 bp | GAGTTGAAGGAGGAGCTAGAGGCTCTCTGCTCTCCAAGCAAGAGTCTGGGATGGATCTTGGCCTTGCCCTaGGCCGTACCGTGCAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: ELKEELEALCSPSKSLGWILALP*AVPCSV Trigger: CACGCTGCACGGTACGGCCAAGGGCAAGGCCAAGAT...CCATCCCAGACTCTTGCTTGGAGAGCAGAGAGCCTCTAGCTCCTCCTTCAACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR CAA 90 bp | AGGGGCCGAGGCAGTAAACAGTCAGAAGAGGTGAGAAAGAACAGTACCTGGGGGCGGTCCTGCAAGCTGTaGGCACTGCCTAGGCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RGRGSKQSEEVRKNSTWGRSCKL*ALPRLS Trigger: CGACAGCCTAGGCAGTGCCAACAGCTTGCAGGACCG...CCCCCAGGTACTGTTCTTTCTCACCTCTTCTGACTGTTTACTGCCTCGGCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CCA 90 bp | ATAGCGTACGCACTCCATGTGGCCCTTCATAGCGGCCATGTCCAGTaGCGTGTGGTAGTCATTGTCCAGGCACCAGATGTTGGCCCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: IAYALHVALHSGHVQ*RVVVIVQAPDVGPE Trigger: TTCGGGGCCAACATCTGGTGCCTGGACAATGACTACCACACGCCACTGGACATGGCCGCTATGAAGGGCCACATGGAGTGCGTACGCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR CAA 90 bp | CTGGGGCCCCTTCAGATCCTGAGGGAATCTTCTAACCAGACCCAATACAGAGAGAGCTTGCCCACCAGCTaGGGGTTGAGGCTGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGPLQILRESSNQTQYRESLPTS*GLRLLC Trigger: GCAGAGCAGCCTCAACCCCAAGCTGGTGGGCAAGCT...CTCTCTGTATTGGGTCTGGTTAGAAGATTCCCTCAGGATCTGAAGGGGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR CAA 90 bp | TCCTGCTCTATCTCTACCTCAGCTGTGATGTCATCAAGTCCCTCAGGGTCAATCGCCTCGCGGAAGGCCTaGTCCTTCAGCTTGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SCSISTSAVMSSSPSGSIASRKA*SFSLPT Trigger: GGTGGGCAAGCTGAAGGACAAGGCCTTCCGCGAGGC...GATTGACCCTGAGGGACTTGATGACATCACAGCTGAGGTAGAGATAGAGCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR CAA 90 bp | AGGACAGTGCACTTCCAGACAGAACACAGAGGTCTCTGGGGGTCTTCCCTCTGCAGCTTCTTCTGGATCTaGGCCTTGCCCTTGGCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: RTVHFQTEHRGLWGSSLCSFFWI*ALPLAV Trigger: TACGGCCAAGGGCAAGGCCAAGATCCAGAAGAAGCT...GCAGAGGGAAGACCCCCAGAGACCTCTGTGTTCTGTCTGGAAGTGCACTGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS-3UTR CAA 90 bp | TCCTGCTCTATCTCTACCTCAGCTGTGATGTCATCAAGTCCCTCAGGGTCAATCTTCTGGATCTTGGCCTaGCCCTTGGCCGTACCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCSISTSAVMSSSPSGSIFWILA*PLAVPC Trigger: GCACGGTACGGCCAAGGGCAAGGCCAAGATCCAGAA...GATTGACCCTGAGGGACTTGATGACATCACAGCTGAGGTAGAGATAGAGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS GCA 72 bp | CGCGCCGGTAGCGCCGCTCCATGCGCTCGTGGTGCTTaGGCTGCATCTTGGCGCACTCGCGGATGCGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RAGSAAPCARGA*AASWRTRGCAA Trigger: AGCGGCGCATCCGCGAGTGCGCCAAGATGCAGCGCAAGCACCACGAGCGCATGGAGCGGCGCTACCGGCGCG 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CAA 72 bp | CGCCGCTCCATGCGCTCGTGGTGCTTGCGCTGCATCTaGGCGCACTCGCGGATGCGCCGCTCTGCCTCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RRSMRSWCLRCI*AHSRMRRSASR Trigger: CCGCGAGGCAGAGCGGCGCATCCGCGAGTGCGCCAAGATGCAGCGCAAGCACCACGAGCGCATGGAGCGGCG 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CCA 72 bp | GCCGCTCCATGCGCTCGTGGTGCTTGCGCTGCATCTTaGCGCACTCGCGGATGCGCCGCTCTGCCTCGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: AAPCARGACAAS*RTRGCAALPRG Trigger: TCCGCGAGGCAGAGCGGCGCATCCGCGAGTGCGCCAAGATGCAGCGCAAGCACCACGAGCGCATGGAGCGGC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS GCA 72 bp | GCGCTGCATCTTGGCGCACTCGCGGATGCGCCGCTCTaGCTCGCGGAAGGCCTTGTCCTTCAGCTTGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ALHLGALADAPL*LAEGLVLQLAH Trigger: GTGGGCAAGCTGAAGGACAAGGCCTTCCGCGAGGCAGAGCGGCGCATCCGCGAGTGCGCCAAGATGCAGCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CCA 72 bp | GGATCTTGGCCTTGCCCTTGGCCGTACCGTGCAGCGTaGCCTGCGAGTAGGGCAGCTGGCTGCCCAGCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GSWPCPWPYRAA*PASRAAGCPAS Trigger: TGACGCTGGGCAGCCAGCTGCCCTACTCGCAGGCCACGCTGCACGGTACGGCCAAGGGCAAGGCCAAGATCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CCA 72 bp | AGCTGTTGGCACTGCCTAGGCTGTCGTCGTCCAGGCTaGGGGAACTATGCAGCCGACCCCGCGGCGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SCWHCLGCRRPG*GNYAADPAACL Trigger: CAGGCACGCCGCGGGGTCGGCTGCATAGTTCCCCCAGCCTGGACGACGACAGCCTAGGCAGTGCCAACAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CAA 90 bp | TCGCGGATGCGCCGCTCTGCCTCGCGGAAGGCCTTGTCCTTCAGCTaGCCCACCAGCTTGGGGTTGAGGCTGCTCTGCTTGGCCGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: SRMRRSASRKALSFS*PTSLGLRLLCLAAM Trigger: CATCGCGGCCAAGCAGAGCAGCCTCAACCCCAAGCTGGTGGGCAAGCTGAAGGACAAGGCCTTCCGCGAGGCAGAGCGGCGCATCCGCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS TCA 72 bp | ACCCAGGCCGGGGCGGGTAAACAAAGAGTCGTGGCCTaGGTCGGTGCTGACCTCCGAGTGAGCAGGCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: TQAGAGKQRVVA*VGADLRVSRLG Trigger: GCCGAGCCTGCTCACTCGGAGGTCAGCACCGACTCAGGCCACGACTCTTTGTTTACCCGCCCCGGCCTGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS GCA 72 bp | CGTGGTGCTTGCGCTGCATCTTGGCGCACTCGCGGATaGGCCGCTCTGCCTCGCGGAAGGCCTTGTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RGACAASWRTRG*AALPRGRPCPS Trigger: TGAAGGACAAGGCCTTCCGCGAGGCAGAGCGGCGCATCCGCGAGTGCGCCAAGATGCAGCGCAAGCACCACG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CCA 72 bp | GCAGCTCTTCCCCGCAACTGCGGTCCTGCAAGCTGTTaGCACTGCCTAGGCTGTCGTCGTCCAGGCTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AALPRNCGPASC*HCLGCRRPGWG Trigger: CCCCCAGCCTGGACGACGACAGCCTAGGCAGTGCCAACAGCTTGCAGGACCGCAGTTGCGGGGAAGAGCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CAA 72 bp | CACTCGCGGATGCGCCGCTCTGCCTCGCGGAAGGCCTaGTCCTTCAGCTTGCCCACCAGCTTGGGGTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HSRMRRSASRKA*SFSLPTSLGLR Trigger: CCTCAACCCCAAGCTGGTGGGCAAGCTGAAGGACAAGGCCTTCCGCGAGGCAGAGCGGCGCATCCGCGAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CAA 90 bp | ATCTTGGCGCACTCGCGGATGCGCCGCTCTGCCTCGCGGAAGGCCTaGTCCTTCAGCTTGCCCACCAGCTTGGGGTTGAGGCTGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ILAHSRMRRSASRKA*SFSLPTSLGLRLLC Trigger: GCAGAGCAGCCTCAACCCCAAGCTGGTGGGCAAGCTGAAGGACAAGGCCTTCCGCGAGGCAGAGCGGCGCATCCGCGAGTGCGCCAAGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS TCA 72 bp | CGTCAGGGGCATTCAGCTCCTTCCGGGTGGCCTCCTTaGGGAGTTCCAGATAGCCATCCCTGGCGGCCCGGT | + |
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Preference number: 6 (lower is better) Translates to: RQGHSAPSGWPP*GVPDSHPWRPG Trigger: ACCGGGCCGCCAGGGATGGCTATCTGGAACTCCTCAAGGAGGCCACCCGGAAGGAGCTGAATGCCCCTGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS TCA 72 bp | AAAGAGTCGTGGCCTGAGTCGGTGCTGACCTCCGAGTaGGCAGGCTCGGCAGCCAGTGTGGCACGGGAGACG | + |
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Preference number: 6 (lower is better) Translates to: KESWPESVLTSE*AGSAASVARET Trigger: CGTCTCCCGTGCCACACTGGCTGCCGAGCCTGCTCACTCGGAGGTCAGCACCGACTCAGGCCACGACTCTTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CAA 72 bp | CGCCGCTCTGCCTCGCGGAAGGCCTTGTCCTTCAGCTaGCCCACCAGCTTGGGGTTGAGGCTGCTCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: RRSASRKALSFS*PTSLGLRLLCL Trigger: CAAGCAGAGCAGCCTCAACCCCAAGCTGGTGGGCAAGCTGAAGGACAAGGCCTTCCGCGAGGCAGAGCGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS GCA 72 bp | TCATCCCAGGGCAGCTCTTCCCCGCAACTGCGGTCCTaGAAGCTGTTGGCACTGCCTAGGCTGTCGTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSQGSSSPQLRS*KLLALPRLSSS Trigger: GGACGACGACAGCCTAGGCAGTGCCAACAGCTTGCAGGACCGCAGTTGCGGGGAAGAGCTGCCCTGGGATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CAA 72 bp | CTACCCAACTGCAGGCCGGAGAGCGATCGGACGCTTTaGCGCCCGTCCTCAGAGACCTTGAAGGTGCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LPNCRPESDRTL*RPSSETLKVPS Trigger: CGAGGGCACCTTCAAGGTCTCTGAGGACGGGCGCAAAAGCGTCCGATCGCTCTCCGGCCTGCAGTTGGGTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CAA 90 bp | TCATCCCAGGGCAGCTCTTCCCCGCAACTGCGGTCCTGCAAGCTGTaGGCACTGCCTAGGCTGTCGTCGTCCAGGCTGGGGGAACTATGC | + |
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Preference number: 6 (lower is better) Translates to: SSQGSSSPQLRSCKL*ALPRLSSSRLGELC Trigger: GCATAGTTCCCCCAGCCTGGACGACGACAGCCTAGGCAGTGCCAACAGCTTGCAGGACCGCAGTTGCGGGGAAGAGCTGCCCTGGGATGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS GCA 72 bp | GTGCCCTGGCGCACAAACATCACATCACTACCCAACTaGAGGCCGGAGAGCGATCGGACGCTTTTGCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: VPWRTNITSLPN*RPESDRTLLRP Trigger: CGGGCGCAAAAGCGTCCGATCGCTCTCCGGCCTGCAGTTGGGTAGTGATGTGATGTTTGTGCGCCAGGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CCA 72 bp | GTGGCGTGTGGTAGTCATTGTCCAGGCACCAGATGTTaGCCCCGAAGGAGACGAGGAAGGACAGGCAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: VACGSHCPGTRC*PRRRRGRTGSA Trigger: TGCACTGCCTGTCCTTCCTCGTCTCCTTCGGGGCCAACATCTGGTGCCTGGACAATGACTACCACACGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS TCA 72 bp | GCCCCGAAGGAGACGAGGAAGGACAGGCAGTGCAGGTaGCCATTGGAAGCTGCCAGATGCAAGGGTGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: APKETRKDRQCR*PLEAARCKGVF Trigger: AAACACACCCTTGCATCTGGCAGCTTCCAATGGTCACCTGCACTGCCTGTCCTTCCTCGTCTCCTTCGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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| CDS CCA 72 bp | GCACTCCATGTGGCCCTTCATAGCGGCCATGTCCAGTaGCGTGTGGTAGTCATTGTCCAGGCACCAGATGTT | + |
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Preference number: 6 (lower is better) Translates to: ALHVALHSGHVQ*RVVVIVQAPDV Trigger: AACATCTGGTGCCTGGACAATGACTACCACACGCCACTGGACATGGCCGCTATGAAGGGCCACATGGAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103037.5 |
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