Pregenerated sensors for USF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058239Ensembl transcript IDs: ENSMUST00000058860.14, ENSMUST00000108119.10, ENSMUST00000162228.9, ENSMUST00000166340.2, ENSMUST00000170442.8, ENSMUST00000170699.8, ENSMUST00000172417.3
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCAAGGGCCACAAGGGTCACAGCACAGGCGCCAGAGCTACAATTTaGGGCGACAGACTGCCGGGCCAAGCCTGGCTTTCTGGCCATCTG | + |
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Preference number: 1 (lower is better) Translates to: AKGHKGHSTGARATI*GDRLPGQAWLSGHL Trigger: CAGATGGCCAGAAAGCCAGGCTTGGCCCGGCAGTCTGTCGCCTCAAATTGTAGCTCTGGCGCCTGTGCTGTGACCCTTGTGGCCCTTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR TCA 90 bp | GAGCCCACTATAAGTGATGGGCTGGTGAGGACCGAGAAGGGAGGCTaGTGGACAGATGGGCAGGTGGGCATCGTTTTCGCATGGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: EPTISDGLVRTEKGG*WTDGQVGIVFAWRR Trigger: CCTCCTCCATGCGAAAACGATGCCCACCTGCCCATCTGTCCATCAGCCTCCCTTCTCGGTCCTCACCAGCCCATCACTTATAGTGGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR GCA 90 bp | TTCTTCAGCTCCTCGATCTGCTGCCTGAGGAGCTCATTGTCCATCTaGAGCCGCTCTGCCTCCTTGAAGGTCTCCTGCATGCGCTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: FFSSSICCLRSSLSI*SRSASLKVSCMRWL Trigger: CAACCAGCGCATGCAGGAGACCTTCAAGGAGGCAGAGCGGCTGCAGATGGACAATGAGCTCCTCAGGCAGCAGATCGAGGAGCTGAAGAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR CCA 90 bp | TGCCGGGTACTCTCGCCCACCATTTCCAGGTTGTGCTGCTGTAGCTaGGCTCGAAGCAGGGCATTCTCATTCTTCAGCTCCTCGATCTGC | + |
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Preference number: 1 (lower is better) Translates to: CRVLSPTISRLCCCS*ARSRAFSFFSSSIC Trigger: GCAGATCGAGGAGCTGAAGAATGAGAATGCCCTGCTTCGAGCCCAGCTACAGCAGCACAACCTGGAAATGGTGGGCGAGAGTACCCGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR CCA 90 bp | TGCGCTGGTTGGTCTGGCGTAGCTCCCGGATGTAATCGCAAGCCTTaGACAGGATGCCCCCTTTACTTGCTCCTGTCTTGCTGTTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: CAGWSGVAPGCNRKP*TGCPLYLLLSCCCL Trigger: CAGACAACAGCAAGACAGGAGCAAGTAAAGGGGGCATCCTGTCCAAGGCTTGCGATTACATCCGGGAGCTACGCCAGACCAACCAGCGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCGCCAGAGCTACAATTTGAGGCGACAGACTGCCGGGCCAAGCCTGGCTTTCCCAGAACAAGAGGGGTaGCGGGCATGGCCTCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: RRQSYNLRRQTAGPSLAFPEQEG*RAWPPC Trigger: GCAGGGAGGCCATGCCCGCCACCCCTCTTGTTCTGG...GAAAGCCAGGCTTGGCCCGGCAGTCTGTCGCCTCAAATTGTAGCTCTGGCGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR CAA 90 bp | TGCTGCCTGAGGAGCTCATTGTCCATCTGCAGCCGCTCTGCCTCCTaGAAGGTCTCCTGCATGCGCTGGTTGGTCTGGCGTAGCTCCCGG | + |
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Preference number: 2 (lower is better) Translates to: CCLRSSLSICSRSAS*KVSCMRWLVWRSSR Trigger: CCGGGAGCTACGCCAGACCAACCAGCGCATGCAGGAGACCTTCAAGGAGGCAGAGCGGCTGCAGATGGACAATGAGCTCCTCAGGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR-3UTR CCA 90 bp | CACCCAGAGGGGAGCAGGGATCCAGAACAAGAGGGGTGGCGGGCATGGCCTCCCAGGCTGATGGACAGATaGGCAGGTGGGCATCGTTTT | + |
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Preference number: 2 (lower is better) Translates to: HPEGSRDPEQEGWRAWPPRLMDR*AGGHRF Trigger: AAAACGATGCCCACCTGCCCATCTGTCCATCAGCCT...GGGAGGCCATGCCCGCCACCCCTCTTGTTCTGGATCCCTGCTCCCCTCTGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR CAA 90 bp | AGCCAAGGGCCACAAGGGTCACAGCACAGGCGCCAGAGCTACAATTaGAGGCGACAGACTGCCGGGCCAAGCCTGGCTTTCTGGCCATCT | + |
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Preference number: 2 (lower is better) Translates to: SQGPQGSQHRRQSYN*RRQTAGPSLAFWPS Trigger: AGATGGCCAGAAAGCCAGGCTTGGCCCGGCAGTCTGTCGCCTCAAATTGTAGCTCTGGCGCCTGTGCTGTGACCCTTGTGGCCCTTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR-3UTR GCA 90 bp | GGGGGCTCAAGGCCAGCCCTCATCATTGGCTGGTACAGAGGGAGGGCTTCAGCCCCCTACCCAACCCCATaGCCAACATGGACACACAGA | + |
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Preference number: 2 (lower is better) Translates to: GGSRPALIIGWYRGRASAPYPTP*PTWTHR Trigger: TCTGTGTGTCCATGTTGGGCATGGGGTTGGGTAGGG...GGCTGAAGCCCTCCCTCTGTACCAGCCAATGATGAGGGCTGGCCTTGAGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR-3UTR GCA 90 bp | TGCCGGGTACTCTCGCCCACCATTTCCAGGTTGTGCTGCTGTAGCTGGGCTCGAGGGGTGTGTCCGGGGTaGAATTGTCCTCTGTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: CRVLSPTISRLCCCSWARGVCPG*NCPLCA Trigger: GGCACACAGAGGACAATTGCACCCCGGACACACCCC...TCGAGCCCAGCTACAGCAGCACAACCTGGAAATGGTGGGCGAGAGTACCCGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCGGGTACTCTCGCCCACCATTTCCAGGTTGTGCTGCTGTAGCTGGGCTCGAGTCTCCTGCATGCGCTaGTTGGTCTGGCGTAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: CRVLSPTISRLCCCSWARVSCMR*LVWRSS Trigger: GGAGCTACGCCAGACCAACCAGCGCATGCAGGAGAC...TCGAGCCCAGCTACAGCAGCACAACCTGGAAATGGTGGGCGAGAGTACCCGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGTATTCCCCGACCCCGCCAACCATCACTGTGGCTTCTCAGGACAGGTTTCAGAGGGGTGGCGGGCATaGCCTCCCTGCAAAGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: MVFPDPANHHCGFSGQVSEGWRA*PPCKGP Trigger: TGGACCTTTGCAGGGAGGCCATGCCCGCCACCCCTC...TGAAACCTGTCCTGAGAAGCCACAGTGATGGTTGGCGGGGTCGGGGAATACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR-3UTR CCA 90 bp | AACCCCATGCCCAACATGGACACACAGACAGACAAGGCGGGGCCACACTGGCCAGGACAGATGGGCAGGTaGGCATCGTTTTCGCATGGA | + |
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Preference number: 2 (lower is better) Translates to: NPMPNMDTQTDKAGPHWPGQMGR*ASFSHG Trigger: TCCATGCGAAAACGATGCCCACCTGCCCATCTGTCC...TGGCCAGTGTGGCCCCGCCTTGTCTGTCTGTGTGTCCATGTTGGGCATGGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGCAGGTGCTCTTAACTGATGAGCCATCTCTCCAGCTCGAGACAGGGTTCGCCAGCCCTCATCATTaGCTGGTACAGAGGGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: EQQVLLTDEPSLQLETGFASPHH*LVQREG Trigger: GCCCTCCCTCTGTACCAGCCAATGATGAGGGCTGGC...GAACCCTGTCTCGAGCTGGAGAGATGGCTCATCAGTTAAGAGCACCTGCTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR-3UTR CCA 90 bp | CCATTTCCAGGTTGTGCTGCTGTAGCTGGGCTCGAAGCAGGGCATTCTCATTCTCCTGCATGCGCTGGTTaGTCTGGCGTAGCTCCCGGA | + |
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Preference number: 2 (lower is better) Translates to: PFPGCAAVAGLEAGHSHSPACAG*SGVAPG Trigger: TCCGGGAGCTACGCCAGACCAACCAGCGCATGCAGG...AGAATGAGAATGCCCTGCTTCGAGCCCAGCTACAGCAGCACAACCTGGAAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCGGGTACTCTCGCCCACCATTTCCAGGTTGTGCTGCTGTAGCTGGGCTCGAGATGCCCCCTTTACTTaGTCCTGTCTTGCTGTTGTC | + |
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Preference number: 2 (lower is better) Translates to: CRVLSPTISRLCCCSWARDAPFT*SCLAVV Trigger: GACAACAGCAAGACAGGAGCAAGTAAAGGGGGCATC...TCGAGCCCAGCTACAGCAGCACAACCTGGAAATGGTGGGCGAGAGTACCCGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAGCTCCTCGATCTGCTGCCTGAGGAGCTCATTGTCCATCTGCAGCCGCTCTTCCTTGAAGGTCTCCTaGATGCGCTGGTTGGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: FSSSICCLRSSLSICSRSSLKVS*MRWLVW Trigger: CCAGACCAACCAGCGCATGCAGGAGACCTTCAAGGA...AGAGCGGCTGCAGATGGACAATGAGCTCCTCAGGCAGCAGATCGAGGAGCTGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGTAGCTGGGCTCGAAGCAGGGCATTCTCATTCTTCAGCTCCTCGATCTGCTCATCTGCAGCCGCTCTaGCTCCTTGAAGGTCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: AVAGLEAGHSHSSAPRSAHLQPL*LLEGLL Trigger: CAGGAGACCTTCAAGGAGGCAGAGCGGCTGCAGATG...AGCAGATCGAGGAGCTGAAGAATGAGAATGCCCTGCTTCGAGCCCAGCTACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR CAA 90 bp | GAGACAGGGTTCTCAAGACACCAGGGGCCAACAGGAGTACTTAGATaGAGGCAAGGTACAAAGTGTAGCAAAGGGAACCTGACGCGCAGG | + |
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Preference number: 2 (lower is better) Translates to: ETGFSRHQGPTGVLR*RQGTKCSKGNLTRR Trigger: CCTGCGCGTCAGGTTCCCTTTGCTACACTTTGTACCTTGCCTCAATCTAAGTACTCCTGTTGGCCCCTGGTGTCTTGAGAACCCTGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR-3UTR GCA 90 bp | CCGGATGTAATCGCAAGCCTTGGACAGGATGCCCCCTTTACTTGCTCCTGTCTTCAATTGTCCTCTGTGTaGCTGTCTGAAGCACATCCT | + |
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Preference number: 2 (lower is better) Translates to: PDVIASLGQDAPFTCSCLQLSSV*LSEAHP Trigger: AGGATGTGCTTCAGACAGGCACACAGAGGACAATTG...AAGACAGGAGCAAGTAAAGGGGGCATCCTGTCCAAGGCTTGCGATTACATCCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR-3UTR TCA 90 bp | GGACAGGATGCCCCCTTTACTTGCTCCTGTCTTGCTGTTGTCTGCATGACAATCTCCACTTCATTGTGCTaGGCTCTTCTTCTCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: GQDAPFTCSCLAVVCMTISTSLC*ALLLSS Trigger: AGATGAGAGAAGAAGAGCTCAGCACAATGAAGTGGA...GATTGTCATGCAGACAACAGCAAGACAGGAGCAAGTAAAGGGGGCATCCTGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166340.2 ENSMUST00000170699.8 |
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| 3UTR CAA 90 bp | GATCCCATTACAGAGGTTTGTGAGCCATCATGTGGTTGCTGGGAATaGAACTCAGGACCTATGGAAGAGCAGCAGGTGCTCTTAACTGAT | + |
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Preference number: 2 (lower is better) Translates to: DPITEVCEPSCGCWE*NSGPMEEQQVLLTD Trigger: ATCAGTTAAGAGCACCTGCTGCTCTTCCATAGGTCCTGAGTTCAATTCCCAGCAACCACATGATGGCTCACAAACCTCTGTAATGGGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR-3UTR GCA 90 bp | AGGGCATTCTCATTCTTCAGCTCCTCGATCTGCTGCCTGAGGAGCTCATTGTCCTGTCTTGCTGTTGTCTaGATGACAATCTGGAATGAT | + |
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Preference number: 2 (lower is better) Translates to: RAFSFFSSSICCLRSSLSCLAVV*MTIWND Trigger: ATCATTCCAGATTGTCATGCAGACAACAGCAAGACA...GGACAATGAGCTCCTCAGGCAGCAGATCGAGGAGCTGAAGAATGAGAATGCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR-3UTR CCA 90 bp | CCGGATGTAATCGCAAGCCTTGGACAGGATGCCCCCTTTACTTGCTCCTGTCTTGTCTGCATGACAATCTaGAATGATTTTGGAAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: PDVIASLGQDAPFTCSCLVCMTI*NDFGKL Trigger: CAGCTTTCCAAAATCATTCCAGATTGTCATGCAGAC...AAGACAGGAGCAAGTAAAGGGGGCATCCTGTCCAAGGCTTGCGATTACATCCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCTGTCTTGCTGTTGTCTGCATGACAATCTGGAATGATTTTGGAAAGCTGTCCACTTCATTGTGCTaGGCTCTTCTTCTCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: CSCLAVVCMTIWNDFGKLSTSLC*ALLLSS Trigger: AGATGAGAGAAGAAGAGCTCAGCACAATGAAGTGGA...CAGCTTTCCAAAATCATTCCAGATTGTCATGCAGACAACAGCAAGACAGGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166340.2 ENSMUST00000170699.8 |
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| 3UTR CCA 72 bp | AGCCTGGCTTTCTGGCCATCTGCCCTCTCTTGGGGGTaGGGGGCTCAAGGCCAGCCCTCATCATTGGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: SLAFWPSALSWG*GAQGQPSSLAG Trigger: ACCAGCCAATGATGAGGGCTGGCCTTGAGCCCCCCACCCCCAAGAGAGGGCAGATGGCCAGAAAGCCAGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR GCA 72 bp | TCCATCTGCAGCCGCTCTGCCTCCTTGAAGGTCTCCTaGATGCGCTGGTTGGTCTGGCGTAGCTCCCGGATG | + |
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Preference number: 3 (lower is better) Translates to: SICSRSASLKVS*MRWLVWRSSRM Trigger: CATCCGGGAGCTACGCCAGACCAACCAGCGCATGCAGGAGACCTTCAAGGAGGCAGAGCGGCTGCAGATGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR CCA 72 bp | GCTGGTGAGGACCGAGAAGGGAGGCTGATGGACAGATaGGCAGGTGGGCATCGTTTTCGCATGGAGGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: AGEDREGRLMDR*AGGHRFRMEEG Trigger: ACCCTCCTCCATGCGAAAACGATGCCCACCTGCCCATCTGTCCATCAGCCTCCCTTCTCGGTCCTCACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR-3UTR CAA 90 bp | GGTATTCCCCGACCCCGCCAACCATCACTGTGGCTTCTCAGGACAGGTTTCATCGGCCAGCCCTCATCATaGGCTGGTACAGAGGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: GIPRPRQPSLWLLRTGFIGQPSS*AGTEGG Trigger: CCCTCCCTCTGTACCAGCCAATGATGAGGGCTGGCC...GATGAAACCTGTCCTGAGAAGCCACAGTGATGGTTGGCGGGGTCGGGGAATACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR GCA 72 bp | CTGCCTGAGGAGCTCATTGTCCATCTGCAGCCGCTCTaGCTCCTTGAAGGTCTCCTGCATGCGCTGGTTGGT | + |
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Preference number: 3 (lower is better) Translates to: LPEELIVHLQPL*LLEGLLHALVG Trigger: ACCAACCAGCGCATGCAGGAGACCTTCAAGGAGGCAGAGCGGCTGCAGATGGACAATGAGCTCCTCAGGCAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR GCA 72 bp | CACTGCCGGGTACTCTCGCCCACCATTTCCAGGTTGTaGTGCTGTAGCTGGGCTCGAAGCAGGGCATTCTCA | + |
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Preference number: 3 (lower is better) Translates to: HCRVLSPTISRL*CCSWARSRAFS Trigger: TGAGAATGCCCTGCTTCGAGCCCAGCTACAGCAGCACAACCTGGAAATGGTGGGCGAGAGTACCCGGCAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCCAGGTTGTGCTGCTGTAGCTGGGCTCGAAGCAGGGCATTCTCATTCTTCATCCTGCATGCGCTGGTaGGTCTGGCGTAGCTCCCGG | + |
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Preference number: 3 (lower is better) Translates to: FPGCAAVAGLEAGHSHSSSCMRW*VWRSSR Trigger: CCGGGAGCTACGCCAGACCAACCAGCGCATGCAGGA...TGAAGAATGAGAATGCCCTGCTTCGAGCCCAGCTACAGCAGCACAACCTGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR GCA 72 bp | TCCTCGATCTGCTGCCTGAGGAGCTCATTGTCCATCTaGAGCCGCTCTGCCTCCTTGAAGGTCTCCTGCATG | + |
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Preference number: 3 (lower is better) Translates to: SSICCLRSSLSI*SRSASLKVSCM Trigger: CATGCAGGAGACCTTCAAGGAGGCAGAGCGGCTGCAGATGGACAATGAGCTCCTCAGGCAGCAGATCGAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR GCA 72 bp | TGCCGGGTACTCTCGCCCACCATTTCCAGGTTGTGCTaGTGTAGCTGGGCTCGAAGCAGGGCATTCTCATTC | + |
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Preference number: 3 (lower is better) Translates to: CRVLSPTISRLC*CSWARSRAFSF Trigger: GAATGAGAATGCCCTGCTTCGAGCCCAGCTACAGCAGCACAACCTGGAAATGGTGGGCGAGAGTACCCGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR TCA 72 bp | ATAAGTGATGGGCTGGTGAGGACCGAGAAGGGAGGCTaGTGGACAGATGGGCAGGTGGGCATCGTTTTCGCA | + |
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Preference number: 3 (lower is better) Translates to: ISDGLVRTEKGG*WTDGQVGIVFA Trigger: TGCGAAAACGATGCCCACCTGCCCATCTGTCCATCAGCCTCCCTTCTCGGTCCTCACCAGCCCATCACTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR CCA 72 bp | TGGTCTGGCGTAGCTCCCGGATGTAATCGCAAGCCTTaGACAGGATGCCCCCTTTACTTGCTCCTGTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: WSGVAPGCNRKP*TGCPLYLLLSC Trigger: GCAAGACAGGAGCAAGTAAAGGGGGCATCCTGTCCAAGGCTTGCGATTACATCCGGGAGCTACGCCAGACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR CCA 72 bp | CTCTCGCCCACCATTTCCAGGTTGTGCTGCTGTAGCTaGGCTCGAAGCAGGGCATTCTCATTCTTCAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: LSPTISRLCCCS*ARSRAFSFFSS Trigger: GGAGCTGAAGAATGAGAATGCCCTGCTTCGAGCCCAGCTACAGCAGCACAACCTGGAAATGGTGGGCGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR-3UTR CAA 90 bp | AGCTGGGCTCGAAGCAGGGCATTCTCATTCTTCAGCTCCTCGATCTGCTGCCTGGGATGCCCCCTTTACTaGCTCCTGTCTTGCTGTTGT | + |
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Preference number: 3 (lower is better) Translates to: SWARSRAFSFFSSSICCLGCPLY*LLSCCC Trigger: ACAACAGCAAGACAGGAGCAAGTAAAGGGGGCATCC...CAGGCAGCAGATCGAGGAGCTGAAGAATGAGAATGCCCTGCTTCGAGCCCAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR-3UTR CAA 90 bp | TTCAGCTCCTCGATCTGCTGCCTGAGGAGCTCATTGTCCATCTGCAGCCGCTCTATCCAGTTGTTGATCTaGTCCCTCCTTCTCCGTTCC | + |
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Preference number: 3 (lower is better) Translates to: FSSSICCLRSSLSICSRSIQLLI*SLLLRS Trigger: GGAACGGAGAAGGAGGGACAAGATCAACAACTGGAT...AGAGCGGCTGCAGATGGACAATGAGCTCCTCAGGCAGCAGATCGAGGAGCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR GCA 72 bp | GTAGCTCCCGGATGTAATCGCAAGCCTTGGACAGGATaGCCCCTTTACTTGCTCCTGTCTTGCTGTTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: VAPGCNRKPWTG*PLYLLLSCCCL Trigger: CAGACAACAGCAAGACAGGAGCAAGTAAAGGGGGCATCCTGTCCAAGGCTTGCGATTACATCCGGGAGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR-3UTR CAA 90 bp | CTACAATTTGAGGCGACAGACTGCCGGGCCAAGCCTGGCTTTCTGGCCATCTGCACACTGGCCAGTTTATaGCAGTTAAATACCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: LQFEATDCRAKPGFLAICTLASL*QLNTSL Trigger: GAGAGAGGTATTTAACTGCAATAAACTGGCCAGTGT...GCAGATGGCCAGAAAGCCAGGCTTGGCCCGGCAGTCTGTCGCCTCAAATTGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR-3UTR CAA 90 bp | CAGGATGCCCCCTTTACTTGCTCCTGTCTTGCTGTTGTCTGCATGACAATCTGGTGGACGATCCAGTTGTaGATCTTGTCCCTCCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: QDAPFTCSCLAVVCMTIWWTIQL*ILSLLL Trigger: GAGAAGGAGGGACAAGATCAACAACTGGATCGTCCA...CCAGATTGTCATGCAGACAACAGCAAGACAGGAGCAAGTAAAGGGGGCATCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166340.2 ENSMUST00000170699.8 |
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| 3UTR TCA 72 bp | CAGAGGTTTGTGAGCCATCATGTGGTTGCTGGGAATTaGACTCAGGACCTATGGAAGAGCAGCAGGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QRFVSHHVVAGN*TQDLWKSSRCS Trigger: AGAGCACCTGCTGCTCTTCCATAGGTCCTGAGTTCAATTCCCAGCAACCACATGATGGCTCACAAACCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
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| 3UTR-3UTR CAA 90 bp | CAGGATGCCCCCTTTACTTGCTCCTGTCTTGCTGTTGTCTGCATGACAATCTGGCAATCTGGAATGATTTaGGAAAGCTGGACGATCCAG | + |
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Preference number: 3 (lower is better) Translates to: QDAPFTCSCLAVVCMTIWQSGMI*ESWTIQ Trigger: CTGGATCGTCCAGCTTTCCAAAATCATTCCAGATTG...CCAGATTGTCATGCAGACAACAGCAAGACAGGAGCAAGTAAAGGGGGCATCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166340.2 ENSMUST00000170699.8 |
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| 3UTR CCA 72 bp | TGTGCTGAGCTCTTCTTCTCTCATCTCGAGGAGTTCTaGTTCCATCAATTTTCGGAGAATAGGGGTGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: CAELFFSHLEEF*FHQFSENRGVS Trigger: GGACACACCCCTATTCTCCGAAAATTGATGGAACCAGAACTCCTCGAGATGAGAGAAGAAGAGCTCAGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
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| 3UTR TCA 72 bp | CCCCCTTTACTTGCTCCTGTCTTGCTGTTGTCTGCATaGCAATCTGGAATGATTTTGGAAAGCTGGACGATC | + |
|
Preference number: 3 (lower is better) Translates to: PPLLAPVLLLSA*QSGMILESWTI Trigger: GATCGTCCAGCTTTCCAAAATCATTCCAGATTGTCATGCAGACAACAGCAAGACAGGAGCAAGTAAAGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166340.2 ENSMUST00000170699.8 |
||
| 3UTR GCA 72 bp | GATGCCCCCTTTACTTGCTCCTGTCTTGCTGTTGTCTaGATGACAATCTGGAATGATTTTGGAAAGCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: DAPFTCSCLAVV*MTIWNDFGKLD Trigger: GTCCAGCTTTCCAAAATCATTCCAGATTGTCATGCAGACAACAGCAAGACAGGAGCAAGTAAAGGGGGCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166340.2 ENSMUST00000170699.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTACACGGTCGATGTCTTCAGACACACTAAAGAGGGCATCGGATCCCATTACAACAGGAGTACTTAGATaGAGGCAAGGTACAAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: STRSMSSDTLKRASDPITTGVLR*RQGTKC Trigger: ACACTTTGTACCTTGCCTCAATCTAAGTACTCCTGT...TGTAATGGGATCCGATGCCCTCTTTAGTGTGTCTGAAGACATCGACCGTGTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | CACACCCACACACCCAGAGGGGAGCAGGGATCCAGAACAAGAGGGGTGGCGGGCCCGCCTGCTGGACACTaGCGATGGCCACCGCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTPRGEQGSRTRGVAGPPAGH*RWPPPS Trigger: AGACGGCGGTGGCCATCGCCAGTGTCCAGCAGGCGG...GCCCGCCACCCCTCTTGTTCTGGATCCCTGCTCCCCTCTGGGTGTGTGGGTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR TCA 90 bp | AACCCCATGCCCAACATGGACACACAGACAGACAAGGCGGGGCCACACTGGCCAATCGTGCCTCCCCGCTaGCAGCTTCGGCCGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NPMPNMDTQTDKAGPHWPIVPPR*QLRPPG Trigger: GCCCGGCGGCCGAAGCTGTCAGCGGGGAGGCACGAT...TGGCCAGTGTGGCCCCGCCTTGTCTGTCTGTGTGTCCATGTTGGGCATGGGGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | CACCCAGAGGGGAGCAGGGATCCAGAACAAGAGGGGTGGCGGGCATGGCCTCCCGTCTCCTGCATGCGCTaGTTGGTCTGGCGTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPEGSRDPEQEGWRAWPPVSCMR*LVWRSS Trigger: GGAGCTACGCCAGACCAACCAGCGCATGCAGGAGAC...GGGAGGCCATGCCCGCCACCCCTCTTGTTCTGGATCCCTGCTCCCCTCTGGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR GCA 90 bp | AACCCCATGCCCAACATGGACACACAGACAGACAAGGCGGGGCCACACTGGCCATCGCCGAACGCCGCCTaGTGGACACTGGCGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NPMPNMDTQTDKAGPHWPSPNAA*WTLAMA Trigger: GGCCATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGA...TGGCCAGTGTGGCCCCGCCTTGTCTGTCTGTGTGTCCATGTTGGGCATGGGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR GCA 90 bp | CACACCCACACACCCAGAGGGGAGCAGGGATCCAGAACAAGAGGGGTGGCGGGCGGGGTGTGTCCGGGGTaGAATTGTCCTCTGTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTPRGEQGSRTRGVAGGVCPG*NCPLCA Trigger: GGCACACAGAGGACAATTGCACCCCGGACACACCCC...GCCCGCCACCCCTCTTGTTCTGGATCCCTGCTCCCCTCTGGGTGTGTGGGTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | CACACCCACACACCCAGAGGGGAGCAGGGATCCAGAACAAGAGGGGTGGCGGGCTGGTACTGGATATTGTaGTCGCCGAACGCCGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTPRGEQGSRTRGVAGWYWIL*SPNAAC Trigger: GCAGGCGGCGTTCGGCGACCACAATATCCAGTACCA...GCCCGCCACCCCTCTTGTTCTGGATCCCTGCTCCCCTCTGGGTGTGTGGGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | CAACCCCATGCCCAACATGGACACACAGACAGACAAGGCGGGGCCACACTGGCCCCTGCATGCGCTGGTTaGTCTGGCGTAGCTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPHAQHGHTDRQGGATLAPACAG*SGVAPG Trigger: TCCGGGAGCTACGCCAGACCAACCAGCGCATGCAGG...GGCCAGTGTGGCCCCGCCTTGTCTGTCTGTGTGTCCATGTTGGGCATGGGGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | ATGGTATTCCCCGACCCCGCCAACCATCACTGTGGCTTCTCAGGACAGGTTTCAGTCCCTTGTCGTGGCTaGCGGCGGCAGCAGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MVFPDPANHHCGFSGQVSVPCRG*RRQQRW Trigger: CCACCGCTGCTGCCGCCGCCAGCCACGACAAGGGAC...TGAAACCTGTCCTGAGAAGCCACAGTGATGGTTGGCGGGGTCGGGGAATACCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | CAGGGATACTCCAGCCTCCCCTCTAACAGCAGGGGTATGTCCTTGACCTCAGCTCCGAACGCCGCCTGCTaGACACTGGCGATGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: QGYSSLPSNSRGMSLTSAPNAAC*TLAMAT Trigger: GGTGGCCATCGCCAGTGTCCAGCAGGCGGCGTTCGG...AGCTGAGGTCAAGGACATACCCCTGCTGTTAGAGGGGAGGCTGGAGTATCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR GCA 90 bp | ACACCCAAACGTACACACACACCCACACACCCAGAGGGGAGCAGGGATCCAGAAAGCCAGCGGGAAGGGTaGTGCGGGACCTGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TPKRTHTPTHPEGSRDPESQREG*CGTCGY Trigger: GTACCCACAGGTCCCGCAGCACCCTTCCCGCTGGCT...TTCTGGATCCCTGCTCCCCTCTGGGTGTGTGGGTGTGTGTGTACGTTTGGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR GCA 90 bp | CCCTGTCTCAATACCTCTAGAGACCAAGGAGGCAGCGGGCAGCGGGGCCTCTGTCATCTGCAGCCGCTCTaGCTCCTTGAAGGTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCLNTSRDQGGSGQRGLCHLQPL*LLEGLL Trigger: CAGGAGACCTTCAAGGAGGCAGAGCGGCTGCAGATG...ACAGAGGCCCCGCTGCCCGCTGCCTCCTTGGTCTCTAGAGGTATTGAGACAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR TCA 90 bp | AACCCCATGCCCAACATGGACACACAGACAGACAAGGCGGGGCCACACTGGCCACCTGGGGTGTCATCATaGCATAGAACTGGCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NPMPNMDTQTDKAGPHWPPGVSS*HRTGLR Trigger: CCGGAGGCCAGTTCTATGTCATGATGACACCCCAGG...TGGCCAGTGTGGCCCCGCCTTGTCTGTCTGTGTGTCCATGTTGGGCATGGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR GCA 90 bp | CCCTGTCTCAATACCTCTAGAGACCAAGGAGGCAGCGGGCAGCGGGGCCTCTGTAGCTCATTGTCCATCTaGAGCCGCTCTGCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PCLNTSRDQGGSGQRGLCSSLSI*SRSASL Trigger: CAAGGAGGCAGAGCGGCTGCAGATGGACAATGAGCT...ACAGAGGCCCCGCTGCCCGCTGCCTCCTTGGTCTCTAGAGGTATTGAGACAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | TATCAGGGAGACCCTAGGAACCCTACCCAACCCCATGCCCAACATGGACACACAGTGCTGCGGGACCTGTaGGTACAGAGGCAGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YQGDPRNPTQPHAQHGHTVLRDL*VQRQRQ Trigger: CTGCCGCTGCCTCTGTACCCACAGGTCCCGCAGCAC...TGTGTGTCCATGTTGGGCATGGGGTTGGGTAGGGTTCCTAGGGTCTCCCTGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | CGCAAGCCTTGGACAGGATGCCCCCTTTACTTGCTCCTGTCTTGCTGTTGTCTGGTGCTGCGGGACCTGTaGGTACAGAGGCAGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKPWTGCPLYLLLSCCCLVLRDL*VQRQRQ Trigger: CTGCCGCTGCCTCTGTACCCACAGGTCCCGCAGCAC...CAGACAACAGCAAGACAGGAGCAAGTAAAGGGGGCATCCTGTCCAAGGCTTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166340.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGTCTCAATACCTCTAGAGACCAAGGAGGCAGCGGGCAGCGGGGCCTCTGTTTGTGCTGCTGTAGCTaGGCTCGAAGCAGGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PCLNTSRDQGGSGQRGLCLCCCS*ARSRAF Trigger: GAATGCCCTGCTTCGAGCCCAGCTACAGCAGCACAA...ACAGAGGCCCCGCTGCCCGCTGCCTCCTTGGTCTCTAGAGGTATTGAGACAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| 3UTR CAA 72 bp | AGGAGCTCATTGTCCATCTGCAGCCGCTCTGCCTCCTaGAAGGTCTCCTGCATGCGCTGGTTGGTCTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RSSLSICSRSAS*KVSCMRWLVWR Trigger: ACGCCAGACCAACCAGCGCATGCAGGAGACCTTCAAGGAGGCAGAGCGGCTGCAGATGGACAATGAGCTCCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
||
| CDS-3UTR TCA 90 bp | CACCCAGAGGGGAGCAGGGATCCAGAACAAGAGGGGTGGCGGGCATGGCCTCCCTCCACTTCATTGTGCTaGGCTCTTCTTCTCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HPEGSRDPEQEGWRAWPPSTSLC*ALLLSS Trigger: AGATGAGAGAAGAAGAGCTCAGCACAATGAAGTGGA...GGGAGGCCATGCCCGCCACCCCTCTTGTTCTGGATCCCTGCTCCCCTCTGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCATCTCGAGGAGTTCTGGTTCCATCAATTTTCGGAGAATAGGGGTGTGATCGTGCCTCCCCGCTaGCAGCTTCGGCCGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSHLEEFWFHQFSENRGVIVPPR*QLRPPG Trigger: GCCCGGCGGCCGAAGCTGTCAGCGGGGAGGCACGAT...CACACCCCTATTCTCCGAAAATTGATGGAACCAGAACTCCTCGAGATGAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
||
| CDS-3UTR GCA 90 bp | TCAATACCTCTAGAGACCAAGGAGGCAGCGGGCAGCGGGGCCTCTGTCCTCCTCGATGCCCCCTTTACTTaGTCCTGTCTTGCTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SIPLETKEAAGSGASVLLDAPFT*SCLAVV Trigger: GACAACAGCAAGACAGGAGCAAGTAAAGGGGGCATC...GAGGAGGACAGAGGCCCCGCTGCCCGCTGCCTCCTTGGTCTCTAGAGGTATTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | TCAATACCTCTAGAGACCAAGGAGGCAGCGGGCAGCGGGGCCTCTGTCCTCCTCACGCGGTATGTCACCTaGCCTCCATTACTCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SIPLETKEAAGSGASVLLTRYVT*PPLLSV Trigger: TACAGAGAGTAATGGAGGCCAGGTGACATACCGCGT...GAGGAGGACAGAGGCCCCGCTGCCCGCTGCCTCCTTGGTCTCTAGAGGTATTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | AACCCCATGCCCAACATGGACACACAGACAGACAAGGCGGGGCCACACTGGCCAGAACAGACACAGCTGTaGTATCGCCCACACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NPMPNMDTQTDKAGPHWPEQTQL*YRPHWM Trigger: CATCCAGTGTGGGCGATACCACAGCTGTGTCTGTTC...TGGCCAGTGTGGCCCCGCCTTGTCTGTCTGTGTGTCCATGTTGGGCATGGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR GCA 90 bp | AGTACACGGTCGATGTCTTCAGACACACTAAAGAGGGCATCGGATCCCATTACACCGTCCCCGCCTTCCTaGAGCTCAACGCCCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: STRSMSSDTLKRASDPITPSPPS*SSTPSS Trigger: CGAGGAGGGCGTTGAGCTGCAGGAAGGCGGGGACGG...TGTAATGGGATCCGATGCCCTCTTTAGTGTGTCTGAAGACATCGACCGTGTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR GCA 90 bp | ATCGTTTTCGCATGGAGGAGGGTAGTGGGCAACGTATCAACAGAAATGCATTATATGGCCACCGCCGTCTaGTCCTCAGCCCCCGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IVFAWRRVVGNVSTEMHYMATAV*SSAPGP Trigger: CGGCCCGGGGGCTGAGGAGCAGACGGCGGTGGCCAT...ATAATGCATTTCTGTTGATACGTTGCCCACTACCCTCCTCCATGCGAAAACGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR GCA 90 bp | CAGGGATACTCCAGCCTCCCCTCTAACAGCAGGGGTATGTCCTTGACCTCAGCTTCCTTGAAGGTCTCCTaGATGCGCTGGTTGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGYSSLPSNSRGMSLTSASLKVS*MRWLVW Trigger: CCAGACCAACCAGCGCATGCAGGAGACCTTCAAGGA...AGCTGAGGTCAAGGACATACCCCTGCTGTTAGAGGGGAGGCTGGAGTATCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | CACACCCACACACCCAGAGGGGAGCAGGGATCCAGAACAAGAGGGGTGGCGGGCGCCACCATTGCTGAATaGATTTTGAATTACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTPRGEQGSRTRGVAGATIAE*ILNYSQ Trigger: CTGGCTGTAATTCAAAATCCATTCAGCAATGGTGGC...GCCCGCCACCCCTCTTGTTCTGGATCCCTGCTCCCCTCTGGGTGTGTGGGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| 3UTR CAA 72 bp | TTCTTCAGCTCCTCGATCTGCTGCCTGAGGAGCTCATaGTCCATCTGCAGCCGCTCTGCCTCCTTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FFSSSICCLRSS*SICSRSASLKV Trigger: GACCTTCAAGGAGGCAGAGCGGCTGCAGATGGACAATGAGCTCCTCAGGCAGCAGATCGAGGAGCTGAAGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
||
| CDS-3UTR TCA 90 bp | CCCTGTCTCAATACCTCTAGAGACCAAGGAGGCAGCGGGCAGCGGGGCCTCTGTGGCTGCCACCATTGCTaGATGGATTTTGAATTACAG | + |
|
Preference number: 4 (lower is better) Translates to: PCLNTSRDQGGSGQRGLCGCHHC*MDFELQ Trigger: CTGTAATTCAAAATCCATTCAGCAATGGTGGCAGCC...ACAGAGGCCCCGCTGCCCGCTGCCTCCTTGGTCTCTAGAGGTATTGAGACAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR TCA 90 bp | TATCAGGGAGACCCTAGGAACCCTACCCAACCCCATGCCCAACATGGACACACACCTCGATCTGCTGCCTaGGGAGCTCATTGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: YQGDPRNPTQPHAQHGHTPRSAA*GAHCPS Trigger: AGATGGACAATGAGCTCCTCAGGCAGCAGATCGAGG...TGTGTGTCCATGTTGGGCATGGGGTTGGGTAGGGTTCCTAGGGTCTCCCTGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR GCA 90 bp | GGATGCCCCCTTTACTTGCTCCTGTCTTGCTGTTGTCTGCATGACAATCTGGAATTCCAGCGGGAAGGGTaGTGCGGGACCTGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GCPLYLLLSCCCLHDNLEFQREG*CGTCGY Trigger: GTACCCACAGGTCCCGCAGCACCCTTCCCGCTGGAA...TTCCAGATTGTCATGCAGACAACAGCAAGACAGGAGCAAGTAAAGGGGGCATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166340.2 |
||
| CDS-3UTR CCA 90 bp | ATCGTTTTCGCATGGAGGAGGGTAGTGGGCAACGTATCAACAGAAATGCATTATTCGGGTCCCTTGTCGTaGCTGGCGGCGGCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IVFAWRRVVGNVSTEMHYSGPLS*LAAAAA Trigger: CGCTGCTGCCGCCGCCAGCCACGACAAGGGACCCGA...ATAATGCATTTCTGTTGATACGTTGCCCACTACCCTCCTCCATGCGAAAACGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | CACACCCACACACCCAGAGGGGAGCAGGGATCCAGAACAAGAGGGGTGGCGGGCGTCTGCATGACAATCTaGAATGATTTTGGAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTPRGEQGSRTRGVAGVCMTI*NDFGKL Trigger: CAGCTTTCCAAAATCATTCCAGATTGTCATGCAGAC...GCCCGCCACCCCTCTTGTTCTGGATCCCTGCTCCCCTCTGGGTGTGTGGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR TCA 90 bp | AGTACACGGTCGATGTCTTCAGACACACTAAAGAGGGCATCGGATCCCATTACACCCTGGCCGTCCAGCTaGCCATCAGTCACCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: STRSMSSDTLKRASDPITPWPSS*PSVTWT Trigger: AGTCCAGGTGACTGATGGTCAGCTGGACGGCCAGGG...TGTAATGGGATCCGATGCCCTCTTTAGTGTGTCTGAAGACATCGACCGTGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | ACACCCAAACGTACACACACACCCACACACCCAGAGGGGAGCAGGGATCCAGAAGTACGGAACTGGTACTaGATATTGTGGTCGCCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TPKRTHTPTHPEGSRDPEVRNWY*ILWSPN Trigger: GTTCGGCGACCACAATATCCAGTACCAGTTCCGTAC...TTCTGGATCCCTGCTCCCCTCTGGGTGTGTGGGTGTGTGTGTACGTTTGGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | AACCCCATGCCCAACATGGACACACAGACAGACAAGGCGGGGCCACACTGGCCATGGTATCGCCCACACTaGATGCTGGAAAATAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NPMPNMDTQTDKAGPHWPWYRPH*MLENKQ Trigger: TTGCTTATTTTCCAGCATCCAGTGTGGGCGATACCA...TGGCCAGTGTGGCCCCGCCTTGTCTGTCTGTGTGTCCATGTTGGGCATGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR TCA 90 bp | CAGGGATACTCCAGCCTCCCCTCTAACAGCAGGGGTATGTCCTTGACCTCAGCTCTCTGGTCTGTAGTTTaGACAGACACAGCTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QGYSSLPSNSRGMSLTSALWSVV*TDTAVV Trigger: TACCACAGCTGTGTCTGTTCAAACTACAGACCAGAG...AGCTGAGGTCAAGGACATACCCCTGCTGTTAGAGGGGAGGCTGGAGTATCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR GCA 90 bp | GGTATTCCCCGACCCCGCCAACCATCACTGTGGCTTCTCAGGACAGGTTTCATCAAAATAAGCAAATCGTaGCTCCCCGCTGACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GIPRPRQPSLWLLRTGFIKISKS*LPADSF Trigger: GAAGCTGTCAGCGGGGAGGCACGATTTGCTTATTTT...GATGAAACCTGTCCTGAGAAGCCACAGTGATGGTTGGCGGGGTCGGGGAATACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR GCA 90 bp | CCCTGTCTCAATACCTCTAGAGACCAAGGAGGCAGCGGGCAGCGGGGCCTCTGTTGTCTTGCTGTTGTCTaGATGACAATCTGGAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: PCLNTSRDQGGSGQRGLCCLAVV*MTIWND Trigger: ATCATTCCAGATTGTCATGCAGACAACAGCAAGACA...ACAGAGGCCCCGCTGCCCGCTGCCTCCTTGGTCTCTAGAGGTATTGAGACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | ATGGTATTCCCCGACCCCGCCAACCATCACTGTGGCTTCTCAGGACAGGTTTCAGCCCACACTGGATGCTaGAAAATAAGCAAATCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MVFPDPANHHCGFSGQVSAHTGC*KISKSC Trigger: GCACGATTTGCTTATTTTCCAGCATCCAGTGTGGGC...TGAAACCTGTCCTGAGAAGCCACAGTGATGGTTGGCGGGGTCGGGGAATACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | TCGCAAGCCTTGGACAGGATGCCCCCTTTACTTGCTCCTGTCTTGCTGTTGTCTGCCCACACTGGATGCTaGAAAATAAGCAAATCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQALDRMPPLLAPVLLLSAHTGC*KISKSC Trigger: GCACGATTTGCTTATTTTCCAGCATCCAGTGTGGGC...AGACAACAGCAAGACAGGAGCAAGTAAAGGGGGCATCCTGTCCAAGGCTTGCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
||
| CDS-3UTR GCA 90 bp | GAATTGAACTCAGGACCTATGGAAGAGCAGCAGGTGCTCTTAACTGATGAGCCAATTTCCAGGTTGTGCTaGTGTAGCTGGGCTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELNSGPMEEQQVLLTDEPISRLC*CSWARS Trigger: GCTTCGAGCCCAGCTACAGCAGCACAACCTGGAAAT...TGGCTCATCAGTTAAGAGCACCTGCTGCTCTTCCATAGGTCCTGAGTTCAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR GCA 90 bp | GAATTGAACTCAGGACCTATGGAAGAGCAGCAGGTGCTCTTAACTGATGAGCCAACCATTTCCAGGTTGTaGTGCTGTAGCTGGGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ELNSGPMEEQQVLLTDEPTISRL*CCSWAR Trigger: TCGAGCCCAGCTACAGCAGCACAACCTGGAAATGGT...TGGCTCATCAGTTAAGAGCACCTGCTGCTCTTCCATAGGTCCTGAGTTCAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CCA 90 bp | GATGCCCCCTTTACTTGCTCCTGTCTTGCTGTTGTCTGCATGACAATCTGGAATGAACAGACACAGCTGTaGTATCGCCCACACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DAPFTCSCLAVVCMTIWNEQTQL*YRPHWM Trigger: CATCCAGTGTGGGCGATACCACAGCTGTGTCTGTTC...ATTCCAGATTGTCATGCAGACAACAGCAAGACAGGAGCAAGTAAAGGGGGCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
||
| CDS-3UTR CCA 90 bp | CAGGATGCCCCCTTTACTTGCTCCTGTCTTGCTGTTGTCTGCATGACAATCTGGTGGTATCGCCCACACTaGATGCTGGAAAATAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QDAPFTCSCLAVVCMTIWWYRPH*MLENKQ Trigger: TTGCTTATTTTCCAGCATCCAGTGTGGGCGATACCA...CCAGATTGTCATGCAGACAACAGCAAGACAGGAGCAAGTAAAGGGGGCATCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170699.8 |
||
| 3UTR CAA 72 bp | TTCTCAAGACACCAGGGGCCAACAGGAGTACTTAGATaGAGGCAAGGTACAAAGTGTAGCAAAGGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSRHQGPTGVLR*RQGTKCSKGNL Trigger: CAGGTTCCCTTTGCTACACTTTGTACCTTGCCTCAATCTAAGTACTCCTGTTGGCCCCTGGTGTCTTGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR TCA 90 bp | AGCTTAGATATCAGGGAGACCCTAGGAACCCTACCCAACCCCATGCCCAACATGTTGCTGTTGTCTGCATaGCAATCTGGAATGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLDIRETLGTLPNPMPNMLLLSA*QSGMIL Trigger: CAAAATCATTCCAGATTGTCATGCAGACAACAGCAA...CATGTTGGGCATGGGGTTGGGTAGGGTTCCTAGGGTCTCCCTGATATCTAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR GCA 90 bp | GAATTGAACTCAGGACCTATGGAAGAGCAGCAGGTGCTCTTAACTGATGAGCCACAATTGTCCTCTGTGTaGCTGTCTGAAGCACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ELNSGPMEEQQVLLTDEPQLSSV*LSEAHP Trigger: AGGATGTGCTTCAGACAGGCACACAGAGGACAATTG...TGGCTCATCAGTTAAGAGCACCTGCTGCTCTTCCATAGGTCCTGAGTTCAATTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS GCA 90 bp | TCGCCGAACGCCGCCTGCTGGACACTGGCGATGGCCACCGCCGTCTaGTCCTCAGCCCCCGGGCCGTCCCCGCCTTCCTGCAGCTCAACG | + |
|
Preference number: 5 (lower is better) Translates to: SPNAACWTLAMATAV*SSAPGPSPPSCSST Trigger: CGTTGAGCTGCAGGAAGGCGGGGACGGCCCGGGGGCTGAGGAGCAGACGGCGGTGGCCATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000172417.3 |
||
| CDS CCA 90 bp | ACTGGATATTGTGGTCGCCGAACGCCGCCTGCTGGACACTGGCGATaGCCACCGCCGTCTGCTCCTCAGCCCCCGGGCCGTCCCCGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TGYCGRRTPPAGHWR*PPPSAPQPPGRPRL Trigger: AAGGCGGGGACGGCCCGGGGGCTGAGGAGCAGACGGCGGTGGCCATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000172417.3 |
||
| CDS TCA 90 bp | GACACGACGCTGACGGCGCCGGCCGCGTCGCCCTGGCCGTCCAGCTaGCCATCAGTCACCTGGACTACGCGGTATGTCACCTGGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DTTLTAPAASPWPSS*PSVTWTTRYVTWPP Trigger: TGGAGGCCAGGTGACATACCGCGTAGTCCAGGTGACTGATGGTCAGCTGGACGGCCAGGGCGACGCGGCCGGCGCCGTCAGCGTCGTGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058860.14 ENSMUST00000162228.9 ENSMUST00000170442.8 |
||
| CDS CCA 90 bp | ACTGGTACTGGATATTGTGGTCGCCGAACGCCGCCTGCTGGACACTaGCGATGGCCACCGCCGTCTGCTCCTCAGCCCCCGGGCCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TGTGYCGRRTPPAGH*RWPPPSAPQPPGRP Trigger: GGGACGGCCCGGGGGCTGAGGAGCAGACGGCGGTGGCCATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000172417.3 |
||
| CDS CCA 90 bp | GTACGGAACTGGTACTGGATATTGTGGTCGCCGAACGCCGCCTGCTaGACACTGGCGATGGCCACCGCCGTCTGCTCCTCAGCCCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VRNWYWILWSPNAAC*TLAMATAVCSSAPG Trigger: CCCGGGGGCTGAGGAGCAGACGGCGGTGGCCATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000172417.3 |
||
| CDS GCA 90 bp | TCTGTACGGAACTGGTACTGGATATTGTGGTCGCCGAACGCCGCCTaGTGGACACTGGCGATGGCCACCGCCGTCTGCTCCTCAGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SVRNWYWILWSPNAA*WTLAMATAVCSSAP Trigger: GGGGGCTGAGGAGCAGACGGCGGTGGCCATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000172417.3 |
||
| CDS-3UTR CAA 90 bp | CCCTGTCTCAATACCTCTAGAGACCAAGGAGGCAGCGGGCAGCGGGGCCTCTGTAGCCGCTCTGCCTCCTaGAAGGTCTCCTGCATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PCLNTSRDQGGSGQRGLCSRSAS*KVSCMR Trigger: GCGCATGCAGGAGACCTTCAAGGAGGCAGAGCGGCT...ACAGAGGCCCCGCTGCCCGCTGCCTCCTTGGTCTCTAGAGGTATTGAGACAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS CCA 90 bp | GCCTGGCCTCCATTACTCTCTGTACGGAACTGGTACTGGATATTGTaGTCGCCGAACGCCGCCTGCTGGACACTGGCGATGGCCACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AWPPLLSVRNWYWIL*SPNAACWTLAMATA Trigger: GGCGGTGGCCATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGGAGGCCAGGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108119.10 |
||
| CDS CCA 90 bp | ACCTGGCCTCCATTACTCTCTGTACGGAACTGGTACTGGATATTGTaGTCGCCGAACGCCGCCTGCTGGACACTGGCGATGGCCACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TWPPLLSVRNWYWIL*SPNAACWTLAMATA Trigger: GGCGGTGGCCATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGGAGGCCAGGT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058860.14 ENSMUST00000162228.9 ENSMUST00000170442.8 |
||
| CDS CCA 90 bp | GTCTGGCCTCCATTACTCTCTGTACGGAACTGGTACTGGATATTGTaGTCGCCGAACGCCGCCTGCTGGACACTGGCGATGGCCACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VWPPLLSVRNWYWIL*SPNAACWTLAMATA Trigger: GGCGGTGGCCATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGGAGGCCAGAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172417.3 |
||
| CDS-3UTR CAA 90 bp | CACACCCACACACCCAGAGGGGAGCAGGGATCCAGAACAAGAGGGGTGGCGGGCGGATGCCCCCTTTACTaGCTCCTGTCTTGCTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HTHTPRGEQGSRTRGVAGGCPLY*LLSCCC Trigger: ACAACAGCAAGACAGGAGCAAGTAAAGGGGGCATCC...GCCCGCCACCCCTCTTGTTCTGGATCCCTGCTCCCCTCTGGGTGTGTGGGTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS GCA 90 bp | AGCTGTGGTATCGCCCACACTGGATGCTGGAAAATAAGCAAATCGTaGCTCCCCGCTGACAGCTTCGGCCGCCGGGCTGCCACCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SCGIAHTGCWKISKS*LPADSFGRRAATIA Trigger: AGCAATGGTGGCAGCCCGGCGGCCGAAGCTGTCAGCGGGGAGGCACGATTTGCTTATTTTCCAGCATCCAGTGTGGGCGATACCACAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000170442.8 |
||
| CDS-3UTR CAA 90 bp | AGGCGCCAGAGCTACAATTTGAGGCGACAGACTGCCGGGCCAAGCCTGGCTTTCGTGTCCGGGGTGCAATaGTCCTCTGTGTGCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRQSYNLRRQTAGPSLAFVSGVQ*SSVCLS Trigger: AGACAGGCACACAGAGGACAATTGCACCCCGGACAC...GAAAGCCAGGCTTGGCCCGGCAGTCTGTCGCCTCAAATTGTAGCTCTGGCGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CAA 90 bp | ATGGTATTCCCCGACCCCGCCAACCATCACTGTGGCTTCTCAGGACAGGTTTCATCCTGCATGCGCTGGTaGGTCTGGCGTAGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: MVFPDPANHHCGFSGQVSSCMRW*VWRSSR Trigger: CCGGGAGCTACGCCAGACCAACCAGCGCATGCAGGA...TGAAACCTGTCCTGAGAAGCCACAGTGATGGTTGGCGGGGTCGGGGAATACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CAA 90 bp | AGTACACGGTCGATGTCTTCAGACACACTAAAGAGGGCATCGGATCCCATTACATCGGCCTCGGGTCCCTaGTCGTGGCTGGCGGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: STRSMSSDTLKRASDPITSASGP*SWLAAA Trigger: TGCCGCCGCCAGCCACGACAAGGGACCCGAGGCCGA...TGTAATGGGATCCGATGCCCTCTTTAGTGTGTCTGAAGACATCGACCGTGTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS CCA 90 bp | CGGTATGTCACCTGGCCTCCATTACTCTCTGTACGGAACTGGTACTaGATATTGTGGTCGCCGAACGCCGCCTGCTGGACACTGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: RYVTWPPLLSVRNWY*ILWSPNAACWTLAM Trigger: CATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGGAGGCCAGGTGACATACCG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058860.14 ENSMUST00000162228.9 ENSMUST00000170442.8 |
||
| CDS CCA 90 bp | TGTGTGCCTGTCTGGCCTCCATTACTCTCTGTACGGAACTGGTACTaGATATTGTGGTCGCCGAACGCCGCCTGCTGGACACTGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: CVPVWPPLLSVRNWY*ILWSPNAACWTLAM Trigger: CATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGGAGGCCAGACAGGCACACA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172417.3 |
||
| CDS CCA 90 bp | GTCCTCTGTGTGCCTGTCTGGCCTCCATTACTCTCTGTACGGAACTaGTACTGGATATTGTGGTCGCCGAACGCCGCCTGCTGGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: VLCVPVWPPLLSVRN*YWILWSPNAACWTL Trigger: CAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGGAGGCCAGACAGGCACACAGAGGAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172417.3 |
||
| CDS-3UTR CAA 90 bp | ACACCCAAACGTACACACACACCCACACACCCAGAGGGGAGCAGGGATCCAGAAAACTGGTACTGGATATaGTGGTCGCCGAACGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPKRTHTPTHPEGSRDPENWYWI*WSPNAA Trigger: GGCGGCGTTCGGCGACCACAATATCCAGTACCAGTT...TTCTGGATCCCTGCTCCCCTCTGGGTGTGTGGGTGTGTGTGTACGTTTGGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS CCA 90 bp | ACTACGCGGTATGTCACCTGGCCTCCATTACTCTCTGTACGGAACTaGTACTGGATATTGTGGTCGCCGAACGCCGCCTGCTGGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: TTRYVTWPPLLSVRN*YWILWSPNAACWTL Trigger: CAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGGAGGCCAGGTGACATACCGCGTAGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058860.14 ENSMUST00000162228.9 ENSMUST00000170442.8 |
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| CDS CCA 90 bp | CTCCCCGCTGACAGCTTCGGCCGCCGGGCTGCCACCATTGCTGAATaGATTTTGAATTACAGCCTGGCCTCCATTACTCTCTGTACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LPADSFGRRAATIAE*ILNYSLASITLCTE Trigger: TTCCGTACAGAGAGTAATGGAGGCCAGGCTGTAATTCAAAATCCATTCAGCAATGGTGGCAGCCCGGCGGCCGAAGCTGTCAGCGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108119.10 |
||
| CDS-3UTR CAA 90 bp | ATGGTATTCCCCGACCCCGCCAACCATCACTGTGGCTTCTCAGGACAGGTTTCATGCCTGAGGAGCTCATaGTCCATCTGCAGCCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MVFPDPANHHCGFSGQVSCLRSS*SICSRS Trigger: AGAGCGGCTGCAGATGGACAATGAGCTCCTCAGGCA...TGAAACCTGTCCTGAGAAGCCACAGTGATGGTTGGCGGGGTCGGGGAATACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CAA 90 bp | GCCATCTCTCCAGCTCGAGACAGGGTTCTCAAGACACCAGGGGCCAACAGGAGTATCCAGTTGTTGATCTaGTCCCTCCTTCTCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AISPARDRVLKTPGANRSIQLLI*SLLLRS Trigger: GGAACGGAGAAGGAGGGACAAGATCAACAACTGGAT...ACTCCTGTTGGCCCCTGGTGTCTTGAGAACCCTGTCTCGAGCTGGAGAGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS CCA 90 bp | TGTAGTTTGAACAGACACAGCTGTGGTATCGCCCACACTGGATGCTaGAAAATAAGCAAATCGTGCCTCCCCGCTGACAGCTTCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CSLNRHSCGIAHTGC*KISKSCLPADSFGR Trigger: GCGGCCGAAGCTGTCAGCGGGGAGGCACGATTTGCTTATTTTCCAGCATCCAGTGTGGGCGATACCACAGCTGTGTCTGTTCAAACTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000170442.8 ENSMUST00000170699.8 |
||
| CDS GCA 90 bp | GTCTGTAGTTTGAACAGACACAGCTGTGGTATCGCCCACACTGGATaGTGGAAAATAAGCAAATCGTGCCTCCCCGCTGACAGCTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VCSLNRHSCGIAHTG*WKISKSCLPADSFG Trigger: GCCGAAGCTGTCAGCGGGGAGGCACGATTTGCTTATTTTCCAGCATCCAGTGTGGGCGATACCACAGCTGTGTCTGTTCAAACTACAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000170442.8 ENSMUST00000170699.8 |
||
| CDS-3UTR CAA 90 bp | TATCAGGGAGACCCTAGGAACCCTACCCAACCCCATGCCCAACATGGACACACATGGACGATCCAGTTGTaGATCTTGTCCCTCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: YQGDPRNPTQPHAQHGHTWTIQL*ILSLLL Trigger: GAGAAGGAGGGACAAGATCAACAACTGGATCGTCCA...TGTGTGTCCATGTTGGGCATGGGGTTGGGTAGGGTTCCTAGGGTCTCCCTGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CAA 90 bp | AGCTTAGATATCAGGGAGACCCTAGGAACCCTACCCAACCCCATGCCCAACATGCAATCTGGAATGATTTaGGAAAGCTGGACGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLDIRETLGTLPNPMPNMQSGMI*ESWTIQ Trigger: CTGGATCGTCCAGCTTTCCAAAATCATTCCAGATTG...CATGTTGGGCATGGGGTTGGGTAGGGTTCCTAGGGTCTCCCTGATATCTAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS-3UTR CAA 90 bp | ATCGTTTTCGCATGGAGGAGGGTAGTGGGCAACGTATCAACAGAAATGCATTATATTGCTGAATGGATTTaGAATTACAGCCAGCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: IVFAWRRVVGNVSTEMHYIAEWI*NYSQRE Trigger: TTCCCGCTGGCTGTAATTCAAAATCCATTCAGCAAT...ATAATGCATTTCTGTTGATACGTTGCCCACTACCCTCCTCCATGCGAAAACGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058860.14 |
||
| CDS GCA 72 bp | GCCGCCTGCTGGACACTGGCGATGGCCACCGCCGTCTaGTCCTCAGCCCCCGGGCCGTCCCCGCCTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AACWTLAMATAV*SSAPGPSPPSC Trigger: GCAGGAAGGCGGGGACGGCCCGGGGGCTGAGGAGCAGACGGCGGTGGCCATCGCCAGTGTCCAGCAGGCGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000172417.3 |
||
| CDS TCA 72 bp | CTGACGGCGCCGGCCGCGTCGCCCTGGCCGTCCAGCTaGCCATCAGTCACCTGGACTACGCGGTATGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: LTAPAASPWPSS*PSVTWTTRYVT Trigger: GGTGACATACCGCGTAGTCCAGGTGACTGATGGTCAGCTGGACGGCCAGGGCGACGCGGCCGGCGCCGTCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058860.14 ENSMUST00000162228.9 ENSMUST00000170442.8 |
||
| CDS CCA 72 bp | GGATATTGTGGTCGCCGAACGCCGCCTGCTGGACACTaGCGATGGCCACCGCCGTCTGCTCCTCAGCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GYCGRRTPPAGH*RWPPPSAPQPP Trigger: CGGGGGCTGAGGAGCAGACGGCGGTGGCCATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000172417.3 |
||
| CDS GCA 72 bp | AACTGGTACTGGATATTGTGGTCGCCGAACGCCGCCTaGTGGACACTGGCGATGGCCACCGCCGTCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NWYWILWSPNAA*WTLAMATAVCS Trigger: GGAGCAGACGGCGGTGGCCATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000172417.3 |
||
| CDS CCA 72 bp | TGGTACTGGATATTGTGGTCGCCGAACGCCGCCTGCTaGACACTGGCGATGGCCACCGCCGTCTGCTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: WYWILWSPNAAC*TLAMATAVCSS Trigger: TGAGGAGCAGACGGCGGTGGCCATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000172417.3 |
||
| CDS GCA 72 bp | ATCGCCCACACTGGATGCTGGAAAATAAGCAAATCGTaGCTCCCCGCTGACAGCTTCGGCCGCCGGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: IAHTGCWKISKS*LPADSFGRRAA Trigger: GGCAGCCCGGCGGCCGAAGCTGTCAGCGGGGAGGCACGATTTGCTTATTTTCCAGCATCCAGTGTGGGCGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000170442.8 ENSMUST00000170699.8 |
||
| CDS TCA 72 bp | TCGGCCGCCGGGCTGCCACCATTGCTGAATGGATTTTaGATTACAGCCAGCGGGAAGGGTGCTGCGGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: SAAGLPPLLNGF*ITASGKGAAGP Trigger: AGGTCCCGCAGCACCCTTCCCGCTGGCTGTAATTCAAAATCCATTCAGCAATGGTGGCAGCCCGGCGGCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058860.14 ENSMUST00000170442.8 |
||
| CDS CAA 72 bp | TTCGGCCGCCGGGCTGCCACCATTGCTGAATGGATTTaGAATTACAGCCAGCGGGAAGGGTGCTGCGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: FGRRAATIAEWI*NYSQREGCCGT Trigger: GGTCCCGCAGCACCCTTCCCGCTGGCTGTAATTCAAAATCCATTCAGCAATGGTGGCAGCCCGGCGGCCGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058860.14 ENSMUST00000170442.8 |
||
| CDS CAA 90 bp | ACAGCCTGGCCTCCATTACTCTCTGTACGGAACTGGTACTGGATATaGTGGTCGCCGAACGCCGCCTGCTGGACACTGGCGATGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: TAWPPLLSVRNWYWI*WSPNAACWTLAMAT Trigger: GGTGGCCATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGGAGGCCAGGCTGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108119.10 |
||
| CDS CAA 90 bp | CCTGTCTGGCCTCCATTACTCTCTGTACGGAACTGGTACTGGATATaGTGGTCGCCGAACGCCGCCTGCTGGACACTGGCGATGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: PVWPPLLSVRNWYWI*WSPNAACWTLAMAT Trigger: GGTGGCCATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGGAGGCCAGACAGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172417.3 |
||
| CDS GCA 72 bp | GCTGAATGGATTTTGAATTACAGCCAGCGGGAAGGGTaGTGCGGGACCTGTGGGTACAGAGGCAGCGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AEWILNYSQREG*CGTCGYRGSGR Trigger: CCTGCCGCTGCCTCTGTACCCACAGGTCCCGCAGCACCCTTCCCGCTGGCTGTAATTCAAAATCCATTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058860.14 ENSMUST00000170442.8 |
||
| CDS CCA 72 bp | GACAGCTTCGGCCGCCGGGCTGCCACCATTGCTGAATaGATTTTGAATTACAGCCAGCGGGAAGGGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DSFGRRAATIAE*ILNYSQREGCC Trigger: GCAGCACCCTTCCCGCTGGCTGTAATTCAAAATCCATTCAGCAATGGTGGCAGCCCGGCGGCCGAAGCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058860.14 ENSMUST00000170442.8 |
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| CDS CCA 72 bp | GCCTGGCCTCCATTACTCTCTGTACGGAACTGGTACTaGATATTGTGGTCGCCGAACGCCGCCTGCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: AWPPLLSVRNWY*ILWSPNAACWT Trigger: TGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGGAGGCCAGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108119.10 |
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| CDS CCA 72 bp | GACAGCTTCGGCCGCCGGGCTGCCACCATTGCTGAATaGATTTTGAATTACAGCCTGGGTCACAGCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: DSFGRRAATIAE*ILNYSLGHSLL Trigger: CAGCAGGCTGTGACCCAGGCTGTAATTCAAAATCCATTCAGCAATGGTGGCAGCCCGGCGGCCGAAGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162228.9 |
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| CDS CCA 72 bp | GTGCCTGTCTGGCCTCCATTACTCTCTGTACGGAACTaGTACTGGATATTGTGGTCGCCGAACGCCGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: VPVWPPLLSVRN*YWILWSPNAAC Trigger: GCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGGAGGCCAGACAGGCAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172417.3 |
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| CDS CAA 72 bp | CCTCCATTACTCTCTGTACGGAACTGGTACTGGATATaGTGGTCGCCGAACGCCGCCTGCTGGACACTGGCG | + |
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Preference number: 6 (lower is better) Translates to: PPLLSVRNWYWI*WSPNAACWTLA Trigger: CGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGGAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000170442.8 ENSMUST00000172417.3 |
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| CDS TCA 72 bp | GTGTGCCTGTCTGAAGCACATCCTGGGGTGTCATCATaGCATAGAACTGGCCTCCGGCCTGTAGGCTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: VCLSEAHPGVSS*HRTGLRPVGSG Trigger: ACCAGAGCCTACAGGCCGGAGGCCAGTTCTATGTCATGATGACACCCCAGGATGTGCTTCAGACAGGCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000170442.8 |
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| CDS CCA 72 bp | CCATTACTCTCTGTACGGAACTGGTACTGGATATTGTaGTCGCCGAACGCCGCCTGCTGGACACTGGCGATG | + |
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Preference number: 6 (lower is better) Translates to: PLLSVRNWYWIL*SPNAACWTLAM Trigger: CATCGCCAGTGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058860.14 ENSMUST00000108119.10 ENSMUST00000162228.9 ENSMUST00000170442.8 ENSMUST00000172417.3 |
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| CDS CCA 72 bp | ACCTGGCCTCCATTACTCTCTGTACGGAACTGGTACTaGATATTGTGGTCGCCGAACGCCGCCTGCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: TWPPLLSVRNWY*ILWSPNAACWT Trigger: TGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGGAGGCCAGGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058860.14 ENSMUST00000162228.9 ENSMUST00000170442.8 |
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| CDS CCA 72 bp | GTCTGGCCTCCATTACTCTCTGTACGGAACTGGTACTaGATATTGTGGTCGCCGAACGCCGCCTGCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: VWPPLLSVRNWY*ILWSPNAACWT Trigger: TGTCCAGCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGGAGGCCAGAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172417.3 |
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| CDS CCA 72 bp | TATGTCACCTGGCCTCCATTACTCTCTGTACGGAACTaGTACTGGATATTGTGGTCGCCGAACGCCGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: YVTWPPLLSVRN*YWILWSPNAAC Trigger: GCAGGCGGCGTTCGGCGACCACAATATCCAGTACCAGTTCCGTACAGAGAGTAATGGAGGCCAGGTGACATA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058860.14 ENSMUST00000162228.9 ENSMUST00000170442.8 |
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| CDS CCA 72 bp | GACAGCTTCGGCCGCCGGGCTGCCACCATTGCTGAATaGATTTTGAATTACAGCCTGGCCTCCATTACTCTC | + |
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Preference number: 6 (lower is better) Translates to: DSFGRRAATIAE*ILNYSLASITL Trigger: GAGAGTAATGGAGGCCAGGCTGTAATTCAAAATCCATTCAGCAATGGTGGCAGCCCGGCGGCCGAAGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108119.10 |
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| CDS GCA 72 bp | AATAGGGGTGTGTCCGGGGTGCAATTGTCCTCTGTGTaGCTGTCTGGCCTCCATTACTCTCTGTACGGAACT | + |
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Preference number: 6 (lower is better) Translates to: NRGVSGVQLSSV*LSGLHYSLYGT Trigger: AGTTCCGTACAGAGAGTAATGGAGGCCAGACAGGCACACAGAGGACAATTGCACCCCGGACACACCCCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172417.3 |
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| CDS GCA 72 bp | GATGTAATCGCAAGCTGCTCCTGTCTTGCTGTTGTCTaGATGACAATCTGGAATGATTTTGGAAAGCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: DVIASCSCLAVV*MTIWNDFGKLD Trigger: GTCCAGCTTTCCAAAATCATTCCAGATTGTCATGCAGACAACAGCAAGACAGGAGCAGCTTGCGATTACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170442.8 |
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