Pregenerated sensors for USF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026641Ensembl transcript IDs: ENSMUST00000001284.13, ENSMUST00000160486.8, ENSMUST00000161241.8, ENSMUST00000167546.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGACAGCACATGCAGTGTGCCGAAGGCGCACCAGACCCGGGGACTaGACAGAGGGAGCAGGCCGGGCTGTCAGTGCACGCCCACACTGT | + |
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Preference number: 1 (lower is better) Translates to: ETAHAVCRRRTRPGD*TEGAGRAVSARPHC Trigger: ACAGTGTGGGCGTGCACTGACAGCCCGGCCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR GCA 90 bp | GATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTGTaGCGAAGGCGCACCAGACCCGGGGACTGCACAGAGGGAGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: DSVCPVSSKETAHAV*RRRTRPGDCTEGAG Trigger: GCCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR GCA 90 bp | AAGCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATaGAGTGTGCCGAAGGCGCACCAGACCCGGGGACTGCACAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: KPRFSVSSVQQGDST*SVPKAHQTRGLHRG Trigger: CCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR CCA 90 bp | ACCCTCCCAGAGCCCAACCAGAGACCGGAACCGGAAGCAAGGGCATaGCCCCTGGAGTATACACACACAGAGTCCAATCGCACCAGTTGG | + |
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Preference number: 1 (lower is better) Translates to: TLPEPNQRPEPEARA*PLEYTHTESNRTSW Trigger: CCAACTGGTGCGATTGGACTCTGTGTGTGTATACTCCAGGGGCCATGCCCTTGCTTCCGGTTCCGGTCTCTGGTTGGGCTCTGGGAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161241.8 |
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| 3UTR GCA 90 bp | CACTGCAGACTGCCACGCCACAGGGCCTCAGTTCAAAAACACACTTaGCAAACTCCCCCGAGTCCCATGCCAGAGGAGGCAGTGAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: HCRLPRHRASVQKHT*QTPPSPMPEEAVKE Trigger: CTCCTTCACTGCCTCCTCTGGCATGGGACTCGGGGGAGTTTGGCAAGTGTGTTTTTGAACTGAGGCCCTGTGGCGTGGCAGTCTGCAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR CCA 90 bp | CAGAGCCCAACCAGAGACCGGAACCGGAAGCAAGGGCATGGCCCCTaGAGTATACACACACAGAGTCCAATCGCACCAGTTGGTGATACC | + |
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Preference number: 1 (lower is better) Translates to: QSPTRDRNRKQGHGP*SIHTQSPIAPVGDT Trigger: GGTATCACCAACTGGTGCGATTGGACTCTGTGTGTGTATACTCCAGGGGCCATGCCCTTGCTTCCGGTTCCGGTCTCTGGTTGGGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161241.8 |
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| 3UTR TCA 90 bp | AGATCTTCCACCTGTTGCCGGAGCACATCGTTGTCCAGCTGCAACTaGTCTAACCCCTGCAGCTCTTCAGACAGCCGGTGGTTGCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: RSSTCCRSTSLSSCN*SNPCSSSDSRWLLC Trigger: GCAGAGCAACCACCGGCTGTCTGAAGAGCTGCAGGGGTTAGATCAGTTGCAGCTGGACAACGATGTGCTCCGGCAACAGGTGGAAGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR GCA 90 bp | CGGGCTGTCAGTGCACGCCCACACTGTTTGTTTCACACCACTCACTaGAGACTGCCACGCCACAGGGCCTCAGTTCAAAAACACACTTGC | + |
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Preference number: 1 (lower is better) Translates to: RAVSARPHCLFHTTH*RLPRHRASVQKHTC Trigger: GCAAGTGTGTTTTTGAACTGAGGCCCTGTGGCGTGGCAGTCTGCAGTGAGTGGTGTGAAACAAACAGTGTGGGCGTGCACTGACAGCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR TCA 90 bp | GAAAGAAATAAAAAGACCCATCCCTGGAGCAGGGAAGGCTCTCAGTaGACCCACCCCTGCCTACAGTTCTCCCTGGCTCCAGAGCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: ERNKKTHPWSREGSQ*THPCLQFSLAPEPS Trigger: GGAAGGCTCTGGAGCCAGGGAGAACTGTAGGCAGGGGTGGGTTCACTGAGAGCCTTCCCTGCTCCAGGGATGGGTCTTTTTATTTCTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR GCA 90 bp | GCTGCAACTGATCTAACCCCTGCAGCTCTTCAGACAGCCGGTGGTTaGTCTGCCGCAGCTCCTGGATATAATCACAGGCTTTGGACAGGA | + |
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Preference number: 1 (lower is better) Translates to: AATDLTPAALQTAGG*SAAAPGYNHRLWTG Trigger: TCCTGTCCAAAGCCTGTGATTATATCCAGGAGCTGCGGCAGAGCAACCACCGGCTGTCTGAAGAGCTGCAGGGGTTAGATCAGTTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR GCA 90 bp | TCAGTGCACGCCCACACTGTTTGTTTCACACCACTCACTGCAGACTaGCACGCCACAGGGCCTCAGTTCAAAAACACACTTGCCAAACTC | + |
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Preference number: 1 (lower is better) Translates to: SVHAHTVCFTPLTAD*HATGPQFKNTLAKL Trigger: GAGTTTGGCAAGTGTGTTTTTGAACTGAGGCCCTGTGGCGTGGCAGTCTGCAGTGAGTGGTGTGAAACAAACAGTGTGGGCGTGCACTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR TCA 90 bp | GTCCGTGGTGCCGAAGCTGAGCTCGCAGGAGCAGGTTCTTGTTCTTaGGATCTTCCACCTGCACGGAGAGGAAATGATGAGGAAAAACAA | + |
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Preference number: 1 (lower is better) Translates to: VRGAEAELAGAGSCS*DLPPARRGNDEEKQ Trigger: TTGTTTTTCCTCATCATTTCCTCTCCGTGCAGGTGGAAGATCTCAAGAACAAGAACCTGCTCCTGCGAGCTCAGCTTCGGCACCACGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160486.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAGGAGACAGCACATGCAGTGTGCCGAAGGCGCACCAGACCCGGGGACTGCATGCTCCTGGGCCGGCTaGAGTCCTTGGCCCAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: ARRQHMQCAEGAPDPGTACSWAG*SPWPKA Trigger: GGCTTTGGGCCAAGGACTGCAGCCGGCCCAGGAGCA...TGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTCCTTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGGCACTCCAAGCGAGCACACGGCAAGCCCAGATTCAGTGTGTCCAGTGTACCAGACCCGGGGACTaGACAGAGGGAGCAGGCCGG | + |
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Preference number: 2 (lower is better) Translates to: SQALQASTRQAQIQCVQCTRPGD*TEGAGR Trigger: CCGGCCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGT...ACACTGGACACACTGAATCTGGGCTTGCCGTGTGCTCGCTTGGAGTGCCTGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR-3UTR CCA 90 bp | CGAAGGCGCACCAGACCCGGGGACTGCACAGAGGGAGCAGGCCGGGCTGTCAGTAGCCAAGAGGGACAATaGCAAGTGTTTTCCAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: RRRTRPGDCTEGAGRAVSSQEGQ*QVFSRD Trigger: GTCCCTGGAAAACACTTGCCATTGTCCCTCTTGGCT...ACTGACAGCCCGGCCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160486.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTCTTCAGACAGCCGGTGGTTGCTCTGCCGCAGCTCCTGGATATAATCACTGGCAGGGTAACCACTaGTGGCGCCAGAGCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: AALQTAGGCSAAAPGYNHWQGNH*WRQSPL Trigger: CAGAGGGCTCTGGCGCCATCAGTGGTTACCCTGCCA...GTGATTATATCCAGGAGCTGCGGCAGAGCAACCACCGGCTGTCTGAAGAGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR-3UTR TCA 90 bp | CTTGATGACGACCTCGAGTCCGTGGTGCCGAAGCTGAGCTCGCAGGAGCAGGTTGTACAATCCAGTTGTTaGTCTTGTCCCGGCGGCGGC | + |
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Preference number: 2 (lower is better) Translates to: LDDDLESVVPKLSSQEQVVQSSC*SCPGGG Trigger: GCCGCCGCCGGGACAAGATCAACAACTGGATTGTAC...AACCTGCTCCTGCGAGCTCAGCTTCGGCACCACGGACTCGAGGTCGTCATCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR-3UTR GCA 90 bp | CTTCGTTATGTTGAGCCCTCCGTTTCTCATCTCGAGTTGTCCTGGGAGCCTCTGCTGGGCGGGGTTGCCTaGCCCAGTAGTGCCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LRYVEPSVSHLELSWEPLLGGVA*PSSASE Trigger: CTCAGAGGCACTACTGGGGCAGGCAACCCCGCCCAG...CAGAGGCTCCCAGGACAACTCGAGATGAGAAACGGAGGGCTCAACATAACGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR-3UTR GCA 90 bp | CAACCAGAGACCGGAACCGGAAGCAAGGGCATGGCCCCTGGAGTATACACACACAGGCCGGGCTGTCAGTaGACGCCCACACTGTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: QPETGTGSKGMAPGVYTHRPGCQ*TPTLFV Trigger: AACAAACAGTGTGGGCGTGCACTGACAGCCCGGCCT...GTGTGTGTATACTCCAGGGGCCATGCCCTTGCTTCCGGTTCCGGTCTCTGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161241.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTCTTCAGACAGCCGGTGGTTGCTCTGCCGCAGCTCCTGGATATAATCACAGAATTGACCTGTGCTaGGCGGGGTTGCCTGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: AALQTAGGCSAAAPGYNHRIDLC*AGLPAP Trigger: TGGGGCAGGCAACCCCGCCCAGCACAGGTCAATTCT...GTGATTATATCCAGGAGCTGCGGCAGAGCAACCACCGGCTGTCTGAAGAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTGTGCCTTAGCCTGTTGCTCCTaGGCCGGCTGCAGTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: AQIQCVQCPARRQHMQCALACCS*AGCSPW Trigger: CCAAGGACTGCAGCCGGCCCAGGAGCAACAGGCTAA...GGCACACTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR CAA 90 bp | GGCGCTCCACTTCGTTATGTTGAGCCCTCCGTTTCTCATCTCGAGTaGTCCTGGGAGCCTCTGACTTCGGGGAATAAGGGTGGGTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GAPLRYVEPSVSHLE*SWEPLTSGNKGGSW Trigger: CCAGGACCCACCCTTATTCCCCGAAGTCAGAGGCTCCCAGGACAACTCGAGATGAGAAACGGAGGGCTCAACATAACGAAGTGGAGCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR CAA 90 bp | TCACTGCAGACTGCCACGCCACAGGGCCTCAGTTCAAAAACACACTaGCCAAACTCCCCCGAGTCCCATGCCAGAGGAGGCAGTGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SLQTATPQGLSSKTH*PNSPESHARGGSEG Trigger: TCCTTCACTGCCTCCTCTGGCATGGGACTCGGGGGAGTTTGGCAAGTGTGTTTTTGAACTGAGGCCCTGTGGCGTGGCAGTCTGCAGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCTTCAGACAGCCGGTGGTTGCTCTGCCGCAGCTCCTGGATATAATCACAGGATGTGTCTCAGCAGCTaGTCCCTCCGTGTCAACGGC | + |
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Preference number: 2 (lower is better) Translates to: ALQTAGGCSAAAPGYNHRMCLSS*SLRVNG Trigger: GCCGTTGACACGGAGGGAGCAGCTGCTGAGACACAT...CCTGTGATTATATCCAGGAGCTGCGGCAGAGCAACCACCGGCTGTCTGAAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR-3UTR GCA 90 bp | ATCCTTTCCCACCTCTTGAGTAAGCCTGCTTCCCAGAGTACTCAGGTACGCATCTGCTCCTGGGCCGGCTaGAGTCCTTGGCCCAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: ILSHLLSKPASQSTQVRICSWAG*SPWPKA Trigger: GGCTTTGGGCCAAGGACTGCAGCCGGCCCAGGAGCA...GATGCGTACCTGAGTACTCTGGGAAGCAGGCTTACTCAAGAGGTGGGAAAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTGTGCCAGGCCGGGCTGTCAGTaGACGCCCACACTGTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: AQIQCVQCPARRQHMQCARPGCQ*TPTLFV Trigger: AACAAACAGTGTGGGCGTGCACTGACAGCCCGGCCT...GGCACACTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCGTTATGTTGAGCCCTCCGTTTCTCATCTCGAGTTGTCCTGGGAGCCTCTGGGGGCAATCGATCGCTaGCTCCCTCCCTGCAATACT | + |
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Preference number: 2 (lower is better) Translates to: LRYVEPSVSHLELSWEPLGAIDR*LPPCNT Trigger: AGTATTGCAGGGAGGGAGCCAGCGATCGATTGCCCC...CAGAGGCTCCCAGGACAACTCGAGATGAGAAACGGAGGGCTCAACATAACGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR-3UTR TCA 90 bp | CGCATCTTAACTTCTGCTCCAGAGAAAGGAAGAGCCAGTGGAAGTACTAGGCCCTTGGCCCAAAGCCCCTaGGTCCCCAGAGTTAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: RILTSAPEKGRASGSTRPLAQSP*VPRVSC Trigger: GCAACTAACTCTGGGGACTCAGGGGCTTTGGGCCAA...GGGCCTAGTACTTCCACTGGCTCTTCCTTTCTCTGGAGCAGAAGTTAAGATGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160486.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGCTCTTCAGACAGCCGGTGGTTGCTCTGCCGCAGCTCCTGGATATAATCATTCCACCTTTACTCTaGCCAGACTTGGTGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LQLFRQPVVALPQLLDIIIPPLL*PDLVLS Trigger: GGAGAGCACCAAGTCTGGCCAGAGTAAAGGTGGAAT...GATTATATCCAGGAGCTGCGGCAGAGCAACCACCGGCTGTCTGAAGAGCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR-3UTR GCA 90 bp | TTAGTTGCTGTCATTCTTGATGACGACCTCGAGTCCGTGGTGCCGAAGCTGAGCAGCTCCCTGGATCACTaGCTGGGTCATAGACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LVAVILDDDLESVVPKLSSSLDH*LGHRLS Trigger: ACTCAGTCTATGACCCAGGCAGTGATCCAGGGAGCT...GCTCAGCTTCGGCACCACGGACTCGAGGTCGTCATCAAGAATGACAGCAACTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR-3UTR CCA 90 bp | CACTTCGTTATGTTGAGCCCTCCGTTTCTCATCTCGAGTTGTCCTGGGAGCCTCCTGGTGAAAGCTCCCTaGATCACTGCCTGGGTCATA | + |
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Preference number: 2 (lower is better) Translates to: HFVMLSPPFLISSCPGSLLVKAP*ITAWVI Trigger: TATGACCCAGGCAGTGATCCAGGGAGCTTTCACCAG...GAGGCTCCCAGGACAACTCGAGATGAGAAACGGAGGGCTCAACATAACGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR-3UTR TCA 90 bp | TTAGTTGCTGTCATTCTTGATGACGACCTCGAGTCCGTGGTGCCGAAGCTGAGCATCATCACAAAGAATTaGCCTGTGCTGGGCGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: LVAVILDDDLESVVPKLSIITKN*PVLGGV Trigger: AACCCCGCCCAGCACAGGTCAATTCTTTGTGATGAT...GCTCAGCTTCGGCACCACGGACTCGAGGTCGTCATCAAGAATGACAGCAACTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR-3UTR TCA 90 bp | TTAGTTGCTGTCATTCTTGATGACGACCTCGAGTCCGTGGTGCCGAAGCTGAGCGCAGGTTCTTGTTCTTaGGATCTTCCACCTGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LVAVILDDDLESVVPKLSAGSCS*DLPPVA Trigger: GGCAACAGGTGGAAGATCTCAAGAACAAGAACCTGC...GCTCAGCTTCGGCACCACGGACTCGAGGTCGTCATCAAGAATGACAGCAACTAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR-3UTR GCA 90 bp | CAGGTACGCATCTTAACTTCTGCTCCAGAGAAAGGAAGAGCCAGTGGAAGTACTGTTCAAAAACACACTTaGCAAACTCCCCCGAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: QVRILTSAPEKGRASGSTVQKHT*QTPPSP Trigger: GGGACTCGGGGGAGTTTGGCAAGTGTGTTTTTGAAC...AGTACTTCCACTGGCTCTTCCTTTCTCTGGAGCAGAAGTTAAGATGCGTACCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR-3UTR GCA 90 bp | CACCTCTTGAGTAAGCCTGCTTCCCAGAGTACTCAGGTACGCATCTTAACTTCTGTTCAAAAACACACTTaGCAAACTCCCCCGAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: HLLSKPASQSTQVRILTSVQKHT*QTPPSP Trigger: GGGACTCGGGGGAGTTTGGCAAGTGTGTTTTTGAAC...AGAAGTTAAGATGCGTACCTGAGTACTCTGGGAAGCAGGCTTACTCAAGAGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR GCA 72 bp | TGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTGTaGCGAAGGCGCACCAGACCCGGGGACTGCACAGAG | + |
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Preference number: 3 (lower is better) Translates to: CPVSSKETAHAV*RRRTRPGDCTE Trigger: CTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTCCTTGCTGGACACTGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR CCA 72 bp | GGGGCCTCGGCTGCTCATTGGGCCCCCTTCTACTCCTaGGATAGCAGCCAGCTAGCATCCTTTCCCACCTCT | + |
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Preference number: 3 (lower is better) Translates to: GASAAHWAPFYS*DSSQLASFPTS Trigger: AGAGGTGGGAAAGGATGCTAGCTGGCTGCTATCCCAGGAGTAGAAGGGGGCCCAATGAGCAGCCGAGGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR-3UTR CAA 90 bp | TCCAAGCGAGCACACGGCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGACATGGGGTTAGCCTGTaGCTCCTGGGCCGGCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: SKRAHGKPRFSVSSVQQGHGVSL*LLGRLQ Trigger: CTGCAGCCGGCCCAGGAGCAACAGGCTAACCCCATG...TCCTTGCTGGACACTGGACACACTGAATCTGGGCTTGCCGTGTGCTCGCTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR GCA 72 bp | TTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATaGAGTGTGCCGAAGGCGCACCAGACCCGGGGACTG | + |
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Preference number: 3 (lower is better) Translates to: FSVSSVQQGDST*SVPKAHQTRGL Trigger: CAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR CCA 72 bp | GAGCCCAACCAGAGACCGGAACCGGAAGCAAGGGCATaGCCCCTGGAGTATACACACACAGAGTCCAATCGC | + |
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Preference number: 3 (lower is better) Translates to: EPNQRPEPEARA*PLEYTHTESNR Trigger: GCGATTGGACTCTGTGTGTGTATACTCCAGGGGCCATGCCCTTGCTTCCGGTTCCGGTCTCTGGTTGGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161241.8 |
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| 3UTR-3UTR CAA 90 bp | CTTGATGACGACCTCGAGTCCGTGGTGCCGAAGCTGAGCTCGCAGGAGCAGGTTTTACTCTGGCCAGACTaGGTGCTCTCCATAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LDDDLESVVPKLSSQEQVLLWPD*VLSIEQ Trigger: CTGCTCTATGGAGAGCACCAAGTCTGGCCAGAGTAA...AACCTGCTCCTGCGAGCTCAGCTTCGGCACCACGGACTCGAGGTCGTCATCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR-3UTR CAA 90 bp | AAGGAGACAGCACATGCAGTGTGCCGAAGGCGCACCAGACCCGGGGACTGCACAAGCAGGTTCTTGTTCTaGAGATCTTCCACCTGCACG | + |
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Preference number: 3 (lower is better) Translates to: KETAHAVCRRRTRPGDCTSRFLF*RSSTCT Trigger: CGTGCAGGTGGAAGATCTCAAGAACAAGAACCTGCT...TGTGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160486.8 |
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| 3UTR TCA 72 bp | ATCTTGTCCCGGCGGCGGCGCTCCACTTCGTTATGTTaGGCCCTCCGTTTCTCATCTCGAGTTGTCCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: ILSRRRRSTSLC*ALRFSSRVVLG Trigger: TCCCAGGACAACTCGAGATGAGAAACGGAGGGCTCAACATAACGAAGTGGAGCGCCGCCGCCGGGACAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR TCA 72 bp | ACCTGTTGCCGGAGCACATCGTTGTCCAGCTGCAACTaGTCTAACCCCTGCAGCTCTTCAGACAGCCGGTGG | + |
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Preference number: 3 (lower is better) Translates to: TCCRSTSLSSCN*SNPCSSSDSRW Trigger: CCACCGGCTGTCTGAAGAGCTGCAGGGGTTAGATCAGTTGCAGCTGGACAACGATGTGCTCCGGCAACAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| 3UTR-3UTR CAA 90 bp | CTGCAGCTCTTCAGACAGCCGGTGGTTGCTCTGCCGCAGCTCCTGGATATAATCTGTACAATCCAGTTGTaGATCTTGTCCCGGCGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: LQLFRQPVVALPQLLDIICTIQL*ILSRRR Trigger: CCGCCGCCGGGACAAGATCAACAACTGGATTGTACA...GATTATATCCAGGAGCTGCGGCAGAGCAACCACCGGCTGTCTGAAGAGCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
||
| 3UTR CCA 72 bp | ACCAGAGACCGGAACCGGAAGCAAGGGCATGGCCCCTaGAGTATACACACACAGAGTCCAATCGCACCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TRDRNRKQGHGP*SIHTQSPIAPV Trigger: AACTGGTGCGATTGGACTCTGTGTGTGTATACTCCAGGGGCCATGCCCTTGCTTCCGGTTCCGGTCTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161241.8 |
||
| 3UTR-3UTR CAA 90 bp | CAACCAGAGACCGGAACCGGAAGCAAGGGCATGGCCCCTGGAGTATACACACACAGTTCAAAAACACACTaGCCAAACTCCCCCGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QPETGTGSKGMAPGVYTHSSKTH*PNSPES Trigger: GGACTCGGGGGAGTTTGGCAAGTGTGTTTTTGAACT...GTGTGTGTATACTCCAGGGGCCATGCCCTTGCTTCCGGTTCCGGTCTCTGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000161241.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTGCACGCCCACACTGTTaGTTTCACACCACTCACTGC | + |
|
Preference number: 3 (lower is better) Translates to: GKPRFSVSSVQQGDSTCSARPHC*FHTTHC Trigger: GCAGTGAGTGGTGTGAAACAAACAGTGTGGGCGTGC...ACTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGGGCTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| 3UTR GCA 72 bp | GATCTAACCCCTGCAGCTCTTCAGACAGCCGGTGGTTaGTCTGCCGCAGCTCCTGGATATAATCACAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: DLTPAALQTAGG*SAAAPGYNHRL Trigger: AAGCCTGTGATTATATCCAGGAGCTGCGGCAGAGCAACCACCGGCTGTCTGAAGAGCTGCAGGGGTTAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
||
| 3UTR CCA 72 bp | TATGTTGAGCCCTCCGTTTCTCATCTCGAGTTGTCCTaGGAGCCTCTGACTTCGGGGAATAAGGGTGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: YVEPSVSHLELS*EPLTSGNKGGS Trigger: GGACCCACCCTTATTCCCCGAAGTCAGAGGCTCCCAGGACAACTCGAGATGAGAAACGGAGGGCTCAACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGGCACTCCAAGCGAGCACACGGCAAGCCCAGATTCAGTGTGTCCAGTGTAGTTCAAAAACACACTaGCCAAACTCCCCCGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SQALQASTRQAQIQCVQCSSKTH*PNSPES Trigger: GGACTCGGGGGAGTTTGGCAAGTGTGTTTTTGAACT...ACACTGGACACACTGAATCTGGGCTTGCCGTGTGCTCGCTTGGAGTGCCTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| 3UTR TCA 72 bp | TTCTTGATGACGACCTCGAGTCCGTGGTGCCGAAGCTaGGCTCGCAGGAGCAGGTTCTTGTTCTTGAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: FLMTTSSPWCRS*ARRSRFLFLRS Trigger: AGATCTCAAGAACAAGAACCTGCTCCTGCGAGCTCAGCTTCGGCACCACGGACTCGAGGTCGTCATCAAGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001284.13 ENSMUST00000160486.8 |
||
| 3UTR TCA 72 bp | TGGGATAGCAGCCAGCTAGCATCCTTTCCCACCTCTTaGGTAAGCCTGCTTCCCAGAGTACTCAGGTACGCA | + |
|
Preference number: 3 (lower is better) Translates to: WDSSQLASFPTS*VSLLPRVLRYA Trigger: TGCGTACCTGAGTACTCTGGGAAGCAGGCTTACTCAAGAGGTGGGAAAGGATGCTAGCTGGCTGCTATCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| 3UTR GCA 72 bp | AGTGCACGCCCACACTGTTTGTTTCACACCACTCACTaGAGACTGCCACGCCACAGGGCCTCAGTTCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SARPHCLFHTTH*RLPRHRASVQK Trigger: TTTTTGAACTGAGGCCCTGTGGCGTGGCAGTCTGCAGTGAGTGGTGTGAAACAAACAGTGTGGGCGTGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| 3UTR GCA 72 bp | GCCCACACTGTTTGTTTCACACCACTCACTGCAGACTaGCACGCCACAGGGCCTCAGTTCAAAAACACACTT | + |
|
Preference number: 3 (lower is better) Translates to: AHTVCFTPLTAD*HATGPQFKNTL Trigger: AAGTGTGTTTTTGAACTGAGGCCCTGTGGCGTGGCAGTCTGCAGTGAGTGGTGTGAAACAAACAGTGTGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTTGGTGCTCTCCATAGAGCAGTCTGGGATGATTTTGGACAGCTGTACAATCCATCATCACAAAGAATaGACCTGTGCTGGGCGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: DLVLSIEQSGMILDSCTIHHHKE*TCAGRG Trigger: ACCCCGCCCAGCACAGGTCAATTCTTTGTGATGATG...GATTGTACAGCTGTCCAAAATCATCCCAGACTGCTCTATGGAGAGCACCAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
||
| 3UTR TCA 72 bp | ATGATGAGGAAAAACAAGATTGACACCGCTAAGCCATaGACTCAGCCCCACAGCCACAGCCAAGAGGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: MMRKNKIDTAKP*TQPHSHSQEGQ Trigger: TTGTCCCTCTTGGCTGTGGCTGTGGGGCTGAGTTCATGGCTTAGCGGTGTCAATCTTGTTTTTCCTCATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160486.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGTGCCGAAGGCGCACCAGACCCGGGGACTGCACAGAGGGAGCAGGCCGGGGGGCAATCGATCGCTaGCTCCCTCCCTGCAATACT | + |
|
Preference number: 4 (lower is better) Translates to: AVCRRRTRPGDCTEGAGRGAIDR*LPPCNT Trigger: AGTATTGCAGGGAGGGAGCCAGCGATCGATTGCCCC...CCGGCCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGC 67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR TCA 90 bp | CGAAGGCGCACCAGACCCGGGGACTGCACAGAGGGAGCAGGCCGGGCTGTCAGTGCCACTGCGCCTTCCTaGATCTGCACTGTTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRRTRPGDCTEGAGRAVSATAPS*ICTVPS Trigger: AGAGGGAACAGTGCAGATTCAGGAAGGCGCAGTGGC...ACTGACAGCCCGGCCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCTTCCGTAGGGGCCTCGGCTGCTCATTGGGCCCCCTTCTACTCCTGGGATCTGGGCGGGGTTGCCTaGCCCAGTAGTGCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EPSVGASAAHWAPFYSWDLGGVA*PSSASE Trigger: CTCAGAGGCACTACTGGGGCAGGCAACCCCGCCCAG...ATCCCAGGAGTAGAAGGGGGCCCAATGAGCAGCCGAGGCCCCTACGGAAGGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR GCA 90 bp | CGAAGGCGCACCAGACCCGGGGACTGCACAGAGGGAGCAGGCCGGGCTGTCAGTCTCTCCAGTAGCCACTaGGCCTTCCTGAATCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRRTRPGDCTEGAGRAVSLSSSH*AFLNLH Trigger: GTGCAGATTCAGGAAGGCGCAGTGGCTACTGGAGAG...ACTGACAGCCCGGCCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR CCA 90 bp | CGAAGGCGCACCAGACCCGGGGACTGCACAGAGGGAGCAGGCCGGGCTGTCAGTTGCCCCTCTGACACCTaGATCACCCTGTACATCACC | + |
|
Preference number: 4 (lower is better) Translates to: RRRTRPGDCTEGAGRAVSCPSDT*ITLYIT Trigger: GGTGATGTACAGGGTGATCCAGGTGTCAGAGGGGCA...ACTGACAGCCCGGCCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGTGCCGAAGGCGCACCAGACCCGGGGACTGCACAGAGGGAGCAGGCCGGATCATCACAAAGAATTaGCCTGTGCTGGGCGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AVCRRRTRPGDCTEGAGRIITKN*PVLGGV Trigger: AACCCCGCCCAGCACAGGTCAATTCTTTGTGATGAT...CCGGCCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAGCCTTCCGTAGGGGCCTCGGCTGCTCATTGGGCCCCCTTCTACTCCTGGTGTCCTGGGAGCCTCTaGCTTCGGGGAATAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PEPSVGASAAHWAPFYSWCPGSL*LRGIRV Trigger: CACCCTTATTCCCCGAAGTCAGAGGCTCCCAGGACA...CCAGGAGTAGAAGGGGGCCCAATGAGCAGCCGAGGCCCCTACGGAAGGCTCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR TCA 90 bp | ACATGCAGTGTGCCGAAGGCGCACCAGACCCGGGGACTGCACAGAGGGAGCAGGTGTCCTGGGAGCCTCTaGCTTCGGGGAATAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TCSVPKAHQTRGLHRGSRCPGSL*LRGIRV Trigger: CACCCTTATTCCCCGAAGTCAGAGGCTCCCAGGACA...CCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGCATGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR TCA 90 bp | GGCACTCCAAGCGAGCACACGGCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCTGGCAGGGTAACCACTaGTGGCGCCAGAGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTPSEHTASPDSVCPVSSWQGNH*WRQSPL Trigger: CAGAGGGCTCTGGCGCCATCAGTGGTTACCCTGCCA...GCTGGACACTGGACACACTGAATCTGGGCTTGCCGTGTGCTCGCTTGGAGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR TCA 90 bp | CGAAGGCGCACCAGACCCGGGGACTGCACAGAGGGAGCAGGCCGGGCTGTCAGTATCATCACAAAGAATTaGCCTGTGCTGGGCGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRRTRPGDCTEGAGRAVSIITKN*PVLGGV Trigger: AACCCCGCCCAGCACAGGTCAATTCTTTGTGATGAT...ACTGACAGCCCGGCCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCATGGTTCCTGCAGCCGCACTTGTGTGACTGTGACGCAGAACTGCAAGCCCTGGGCGGGGTTGCCTaGCCCAGTAGTGCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPWFLQPHLCDCDAELQALGGVA*PSSASE Trigger: CTCAGAGGCACTACTGGGGCAGGCAACCCCGCCCAG...GGCTTGCAGTTCTGCGTCACAGTCACACAAGTGCGGCTGCAGGAACCATGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161241.8 |
||
| CDS-3UTR CCA 90 bp | CGAAGGCGCACCAGACCCGGGGACTGCACAGAGGGAGCAGGCCGGGCTGTCAGTGATAGCTACACTAGTTaGGTCCTCTCCAGTAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRRTRPGDCTEGAGRAVSDSYTS*VLSSSH Trigger: GTGGCTACTGGAGAGGACCCAACTAGTGTAGCTATC...ACTGACAGCCCGGCCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR CCA 90 bp | ACATGCAGTGTGCCGAAGGCGCACCAGACCCGGGGACTGCACAGAGGGAGCAGGTGCCCCTCTGACACCTaGATCACCCTGTACATCACC | + |
|
Preference number: 4 (lower is better) Translates to: TCSVPKAHQTRGLHRGSRCPSDT*ITLYIT Trigger: GGTGATGTACAGGGTGATCCAGGTGTCAGAGGGGCA...CCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGCATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR CCA 90 bp | CATGCAGTGTGCCGAAGGCGCACCAGACCCGGGGACTGCACAGAGGGAGCAGGCCTGGTGAAAGCTCCCTaGATCACTGCCTGGGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: HAVCRRRTRPGDCTEGAGLVKAP*ITAWVI Trigger: TATGACCCAGGCAGTGATCCAGGGAGCTTTCACCAG...GCCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTCCAGCAAGGAGACAGCACATGCAGTGTGCCGAAGGCGCACCAGACCCGGGCCACTGCGCCTTCCTaGATCTGCACTGTTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVQQGDSTCSVPKAHQTRATAPS*ICTVPS Trigger: AGAGGGAACAGTGCAGATTCAGGAAGGCGCAGTGGC...CCGGGTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTCCTTGCTGGACACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTCCAGCAAGGAGACAGCACATGCAGTGTGCCGAAGGCGCACCAGACCCGGGTACAATCCAGTTGTTaGTCTTGTCCCGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVQQGDSTCSVPKAHQTRVQSSC*SCPGGG Trigger: GCCGCCGCCGGGACAAGATCAACAACTGGATTGTAC...CCGGGTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTCCTTGCTGGACACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGGCCGGGCTGTCAGTGCACGCCCACACTGTTTGTTTCACACCACTCAAGAATTGACCTGTGCTaGGCGGGGTTGCCTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRPGCQCTPTLFVSHHSRIDLC*AGLPAP Trigger: TGGGGCAGGCAACCCCGCCCAGCACAGGTCAATTCT...TGAGTGGTGTGAAACAAACAGTGTGGGCGTGCACTGACAGCCCGGCCTGCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR TCA 90 bp | TCCAAGCGAGCACACGGCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGATGGCAGGGTAACCACTaGTGGCGCCAGAGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKRAHGKPRFSVSSVQQGWQGNH*WRQSPL Trigger: CAGAGGGCTCTGGCGCCATCAGTGGTTACCCTGCCA...TCCTTGCTGGACACTGGACACACTGAATCTGGGCTTGCCGTGTGCTCGCTTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTCCAGCAAGGAGACAGCACATGCAGTGTGCCGAAGGCGCACCAGACCCGGACCCTGTACATCACCTaGCCCCCATTCTCAGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SVQQGDSTCSVPKAHQTRTLYIT*PPFSVR Trigger: CCGAACTGAGAATGGGGGCCAGGTGATGTACAGGGT...CCGGGTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTCCTTGCTGGACACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTCCAGCAAGGAGACAGCACATGCAGTGTGCCGAAGGCGCACCAGACCCGGTGCCCCTCTGACACCTaGATCACCCTGTACATCACC | + |
|
Preference number: 4 (lower is better) Translates to: SVQQGDSTCSVPKAHQTRCPSDT*ITLYIT Trigger: GGTGATGTACAGGGTGATCCAGGTGTCAGAGGGGCA...CCGGGTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTCCTTGCTGGACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGGAGACAGCACATGCAGTGTGCCGAAGGCGCACCAGACCCGGGGACTGCACTGGTGAAAGCTCCCTaGATCACTGCCTGGGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: ARRQHMQCAEGAPDPGTALVKAP*ITAWVI Trigger: TATGACCCAGGCAGTGATCCAGGGAGCTTTCACCAG...TGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTCCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| 3UTR CAA 72 bp | GATCTTGTCCCGGCGGCGGCGCTCCACTTCGTTATGTaGAGCCCTCCGTTTCTCATCTCGAGTTGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DLVPAAALHFVM*SPPFLISSCPG Trigger: CCCAGGACAACTCGAGATGAGAAACGGAGGGCTCAACATAACGAAGTGGAGCGCCGCCGCCGGGACAAGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
||
| CDS-3UTR TCA 90 bp | GTCCCTCTCTCAGGCACTCCAAGCGAGCACACGGCAAGCCCAGATTCAGTGTGTGCCACTGCGCCTTCCTaGATCTGCACTGTTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPLSGTPSEHTASPDSVCATAPS*ICTVPS Trigger: AGAGGGAACAGTGCAGATTCAGGAAGGCGCAGTGGC...ACACACTGAATCTGGGCTTGCCGTGTGCTCGCTTGGAGTGCCTGAGAGAGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR TCA 90 bp | GCACTCCAAGCGAGCACACGGCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCATGTCCTGGGAGCCTCTaGCTTCGGGGAATAAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALQASTRQAQIQCVQCPACPGSL*LRGIRV Trigger: CACCCTTATTCCCCGAAGTCAGAGGCTCCCAGGACA...TGCTGGACACTGGACACACTGAATCTGGGCTTGCCGTGTGCTCGCTTGGAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR GCA 90 bp | GGCACTCCAAGCGAGCACACGGCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCCTCTCCAGTAGCCACTaGGCCTTCCTGAATCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTPSEHTASPDSVCPVSSLSSSH*AFLNLH Trigger: GTGCAGATTCAGGAAGGCGCAGTGGCTACTGGAGAG...GCTGGACACTGGACACACTGAATCTGGGCTTGCCGTGTGCTCGCTTGGAGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGACCGGAACCGGAAGCAAGGGCATGGCCCCTGGAGTATACACACACAGAGATGTGTCTCAGCAGCTaGTCCCTCCGTGTCAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: QRPEPEARAWPLEYTHTEMCLSS*SLRVNG Trigger: GCCGTTGACACGGAGGGAGCAGCTGCTGAGACACAT...CTCTGTGTGTGTATACTCCAGGGGCCATGCCCTTGCTTCCGGTTCCGGTCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161241.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCTTCCGTAGGGGCCTCGGCTGCTCATTGGGCCCCCTTCTACTCCTGGGATGATAGCTACACTAGTTaGGTCCTCTCCAGTAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EPSVGASAAHWAPFYSWDDSYTS*VLSSSH Trigger: GTGGCTACTGGAGAGGACCCAACTAGTGTAGCTATC...ATCCCAGGAGTAGAAGGGGGCCCAATGAGCAGCCGAGGCCCCTACGGAAGGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR TCA 90 bp | AGCACACGGCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACGTACAATCCAGTTGTTaGTCTTGTCCCGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: STRQAQIQCVQCPARRQHVQSSC*SCPGGG Trigger: GCCGCCGCCGGGACAAGATCAACAACTGGATTGTAC...GTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGGGCTTGCCGTGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCAGGCACTCCAAGCGAGCACACGGCAAGCCCAGATTCAGTGTGTCCAGTGCTCTCCAGTAGCCACTaGGCCTTCCTGAATCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSGTPSEHTASPDSVCPVLSSSH*AFLNLH Trigger: GTGCAGATTCAGGAAGGCGCAGTGGCTACTGGAGAG...CACTGGACACACTGAATCTGGGCTTGCCGTGTGCTCGCTTGGAGTGCCTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTGACTTCGGGGAATAAGGGTGGGTCCTGGGGGCAATCGATCGCTGGCTCCGATAGCTACACTAGTTaGGTCCTCTCCAGTAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLTSGNKGGSWGQSIAGSDSYTS*VLSSSH Trigger: GTGGCTACTGGAGAGGACCCAACTAGTGTAGCTATC...GGAGCCAGCGATCGATTGCCCCCAGGACCCACCCTTATTCCCCGAAGTCAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
||
| CDS-3UTR CCA 90 bp | CTTGATGACGACCTCGAGTCCGTGGTGCCGAAGCTGAGCTCGCAGGAGCAGGTTCTGGTGAAAGCTCCCTaGATCACTGCCTGGGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LDDDLESVVPKLSSQEQVLVKAP*ITAWVI Trigger: TATGACCCAGGCAGTGATCCAGGGAGCTTTCACCAG...AACCTGCTCCTGCGAGCTCAGCTTCGGCACCACGGACTCGAGGTCGTCATCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160486.8 |
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| CDS-3UTR CCA 90 bp | CCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTGTGCCGAAGAATTGACCTGTGCTaGGCGGGGTTGCCTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PDSVCPVSSKETAHAVCRRIDLC*AGLPAP Trigger: TGGGGCAGGCAACCCCGCCCAGCACAGGTCAATTCT...TCGGCACACTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CCA 90 bp | GAGCCTTCCGTAGGGGCCTCGGCTGCTCATTGGGCCCCCTTCTACTCCTGGGATCTCCATAGAGCAGTCTaGGATGATTTTGGACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPSVGASAAHWAPFYSWDLHRAV*DDFGQL Trigger: CAGCTGTCCAAAATCATCCCAGACTGCTCTATGGAG...ATCCCAGGAGTAGAAGGGGGCCCAATGAGCAGCCGAGGCCCCTACGGAAGGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CCA 90 bp | GCAAGGAGACAGCACATGCAGTGTGCCGAAGGCGCACCAGACCCGGGGACTGCACTCCATAGAGCAGTCTaGGATGATTTTGGACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARRQHMQCAEGAPDPGTALHRAV*DDFGQL Trigger: CAGCTGTCCAAAATCATCCCAGACTGCTCTATGGAG...TGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTCCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CCA 90 bp | GCAGGGAAGGCTCTCAGTGAACCCACCCCTGCCTACAGTTCTCCCTGGCTCCAGATTCCACCTTTACTCTaGCCAGACTTGGTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGKALSEPTPAYSSPWLQIPPLL*PDLVLS Trigger: GGAGAGCACCAAGTCTGGCCAGAGTAAAGGTGGAAT...CTGGAGCCAGGGAGAACTGTAGGCAGGGGTGGGTTCACTGAGAGCCTTCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR TCA 90 bp | ACTTCTGCTCCAGAGAAAGGAAGAGCCAGTGGAAGTACTAGGCCCGCAGTCCCTGTACAATCCAGTTGTTaGTCTTGTCCCGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSAPEKGRASGSTRPAVPVQSSC*SCPGGG Trigger: GCCGCCGCCGGGACAAGATCAACAACTGGATTGTAC...AGGGACTGCGGGCCTAGTACTTCCACTGGCTCTTCCTTTCTCTGGAGCAGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR TCA 90 bp | GGGAGCAGGCCGGGCTGTCAGTGCACGCCCACACTGTTTGTTTCACACCACTCAGCAGGTTCTTGTTCTTaGGATCTTCCACCTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRPGCQCTPTLFVSHHSAGSCS*DLPPVA Trigger: GGCAACAGGTGGAAGATCTCAAGAACAAGAACCTGC...TGAGTGGTGTGAAACAAACAGTGTGGGCGTGCACTGACAGCCCGGCCTGCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR GCA 90 bp | CTCCAAGCGAGCACACGGCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGGTTAGTCTGACCTGTTaGCGGAGCACATCGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQASTRQAQIQCVQCPARVSLTC*RSTSLS Trigger: GGACAACGATGTGCTCCGGCAACAGGTCAGACTAAC...CCTTGCTGGACACTGGACACACTGAATCTGGGCTTGCCGTGTGCTCGCTTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160486.8 |
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| CDS-3UTR CCA 90 bp | GCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTGGGGGCAATCGATCGCTaGCTCCCTCCCTGCAATACT | + |
|
Preference number: 4 (lower is better) Translates to: ASPDSVCPVSSKETAHAVGAIDR*LPPCNT Trigger: AGTATTGCAGGGAGGGAGCCAGCGATCGATTGCCCC...CACTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGGGCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR GCA 90 bp | CAGGTACGCATCTTAACTTCTGCTCCAGAGAAAGGAAGAGCCAGTGGAAGTACTCTGGGCGGGGTTGCCTaGCCCAGTAGTGCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVRILTSAPEKGRASGSTLGGVA*PSSASE Trigger: CTCAGAGGCACTACTGGGGCAGGCAACCCCGCCCAG...AGTACTTCCACTGGCTCTTCCTTTCTCTGGAGCAGAAGTTAAGATGCGTACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CCA 90 bp | AGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTGTGCCGAAGGGGGCAATCGATCGCTaGCTCCCTCCCTGCAATACT | + |
|
Preference number: 4 (lower is better) Translates to: RFSVSSVQQGDSTCSVPKGAIDR*LPPCNT Trigger: AGTATTGCAGGGAGGGAGCCAGCGATCGATTGCCCC...CTTCGGCACACTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR TCA 90 bp | TTGAGTAAGCCTGCTTCCCAGAGTACTCAGGTACGCATCTTAACTTCTGCTCCATGGCAGGGTAACCACTaGTGGCGCCAGAGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSKPASQSTQVRILTSAPWQGNH*WRQSPL Trigger: CAGAGGGCTCTGGCGCCATCAGTGGTTACCCTGCCA...TGGAGCAGAAGTTAAGATGCGTACCTGAGTACTCTGGGAAGCAGGCTTACTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR GCA 90 bp | CGCATCTTAACTTCTGCTCCAGAGAAAGGAAGAGCCAGTGGAAGTACTAGGCCCATGTGTCTCAGCAGCTaGTCCCTCCGTGTCAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: RILTSAPEKGRASGSTRPMCLSS*SLRVNG Trigger: GCCGTTGACACGGAGGGAGCAGCTGCTGAGACACAT...GGGCCTAGTACTTCCACTGGCTCTTCCTTTCTCTGGAGCAGAAGTTAAGATGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CCA 90 bp | ACCGGAAGCAAGGGCATGGCCCCTGGAGTATACACACACAGAGTCCAATCGCACATTCCACCTTTACTCTaGCCAGACTTGGTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGSKGMAPGVYTHRVQSHIPPLL*PDLVLS Trigger: GGAGAGCACCAAGTCTGGCCAGAGTAAAGGTGGAAT...GTGCGATTGGACTCTGTGTGTGTATACTCCAGGGGCCATGCCCTTGCTTCCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161241.8 |
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| CDS-3UTR TCA 90 bp | ACTTCTGCTCCAGAGAAAGGAAGAGCCAGTGGAAGTACTAGGCCCGCAGTCCCTATCATCACAAAGAATTaGCCTGTGCTGGGCGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSAPEKGRASGSTRPAVPIITKN*PVLGGV Trigger: AACCCCGCCCAGCACAGGTCAATTCTTTGTGATGAT...AGGGACTGCGGGCCTAGTACTTCCACTGGCTCTTCCTTTCTCTGGAGCAGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR GCA 90 bp | ACAGCCACAGCCAAGAGGGACAATGGCAAGTGTTTTCCAGGGACTCCAAACTGGAGCTCCCTGGATCACTaGCTGGGTCATAGACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TATAKRDNGKCFPGTPNWSSLDH*LGHRLS Trigger: ACTCAGTCTATGACCCAGGCAGTGATCCAGGGAGCT...CCAGTTTGGAGTCCCTGGAAAACACTTGCCATTGTCCCTCTTGGCTGTGGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160486.8 |
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| CDS-3UTR CCA 90 bp | TTGAGTAAGCCTGCTTCCCAGAGTACTCAGGTACGCATCTTAACTTCTGCTCCAAGAATTGACCTGTGCTaGGCGGGGTTGCCTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSKPASQSTQVRILTSAPRIDLC*AGLPAP Trigger: TGGGGCAGGCAACCCCGCCCAGCACAGGTCAATTCT...TGGAGCAGAAGTTAAGATGCGTACCTGAGTACTCTGGGAAGCAGGCTTACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| 3UTR CAA 72 bp | AGACTGCCCAGGTTAGGCCGGAAATTTCACCCAGGTTaGGCACAGGCACCAGGACTCTGGGTAATGAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: RLPRLGRKFHPG*AQAPGLWVMSI Trigger: TATACTCATTACCCAGAGTCCTGGTGCCTGTGCCAAACCTGGGTGAAATTTCCGGCCTAACCTGGGCAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161241.8 |
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| CDS-3UTR TCA 90 bp | GACTTGGTGCTCTCCATAGAGCAGTCTGGGATGATTTTGGACAGCTGTACAATCGCCACTGCGCCTTCCTaGATCTGCACTGTTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DLVLSIEQSGMILDSCTIATAPS*ICTVPS Trigger: AGAGGGAACAGTGCAGATTCAGGAAGGCGCAGTGGC...GATTGTACAGCTGTCCAAAATCATCCCAGACTGCTCTATGGAGAGCACCAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| CDS-3UTR CCA 90 bp | TTAGTTGCTGTCATTCTTGATGACGACCTCGAGTCCGTGGTGCCGAAGCTGAGCGATAGCTACACTAGTTaGGTCCTCTCCAGTAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVAVILDDDLESVVPKLSDSYTS*VLSSSH Trigger: GTGGCTACTGGAGAGGACCCAACTAGTGTAGCTATC...GCTCAGCTTCGGCACCACGGACTCGAGGTCGTCATCAAGAATGACAGCAACTAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001284.13 ENSMUST00000160486.8 |
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| CDS-3UTR GCA 90 bp | GACTTGGTGCTCTCCATAGAGCAGTCTGGGATGATTTTGGACAGCTGTACAATCCTCTCCAGTAGCCACTaGGCCTTCCTGAATCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DLVLSIEQSGMILDSCTILSSSH*AFLNLH Trigger: GTGCAGATTCAGGAAGGCGCAGTGGCTACTGGAGAG...GATTGTACAGCTGTCCAAAATCATCCCAGACTGCTCTATGGAGAGCACCAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001284.13 |
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| CDS-3UTR CCA 90 bp | ATCCTTTCCCACCTCTTGAGTAAGCCTGCTTCCCAGAGTACTCAGGTACGCATCATTCCACCTTTACTCTaGCCAGACTTGGTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILSHLLSKPASQSTQVRIIPPLL*PDLVLS Trigger: GGAGAGCACCAAGTCTGGCCAGAGTAAAGGTGGAAT...GATGCGTACCTGAGTACTCTGGGAAGCAGGCTTACTCAAGAGGTGGGAAAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CCA 90 bp | CGCATCTTAACTTCTGCTCCAGAGAAAGGAAGAGCCAGTGGAAGTACTAGGCCCCTCCATAGAGCAGTCTaGGATGATTTTGGACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RILTSAPEKGRASGSTRPLHRAV*DDFGQL Trigger: CAGCTGTCCAAAATCATCCCAGACTGCTCTATGGAG...GGGCCTAGTACTTCCACTGGCTCTTCCTTTCTCTGGAGCAGAAGTTAAGATGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR TCA 90 bp | CAGGTACGCATCTTAACTTCTGCTCCAGAGAAAGGAAGAGCCAGTGGAAGTACTTTCGGAAGACGTACTTaGCGTTGGGGTCAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVRILTSAPEKGRASGSTFGRRT*RWGQEK Trigger: CTTTTCCTGACCCCAACGTCAAGTACGTCTTCCGAA...AGTACTTCCACTGGCTCTTCCTTTCTCTGGAGCAGAAGTTAAGATGCGTACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR TCA 90 bp | CACCTCTTGAGTAAGCCTGCTTCCCAGAGTACTCAGGTACGCATCTTAACTTCTGCAGGTTCTTGTTCTTaGGATCTTCCACCTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLLSKPASQSTQVRILTSAGSCS*DLPPVA Trigger: GGCAACAGGTGGAAGATCTCAAGAACAAGAACCTGC...AGAAGTTAAGATGCGTACCTGAGTACTCTGGGAAGCAGGCTTACTCAAGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CCA 90 bp | GCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTGTATAATCACAGGCTTTaGACAGGATTCCACCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ASPDSVCPVSSKETAHAVYNHRL*TGFHLY Trigger: GTAAAGGTGGAATCCTGTCCAAAGCCTGTGATTATA...CACTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGGGCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CCA 90 bp | TTGAGTAAGCCTGCTTCCCAGAGTACTCAGGTACGCATCTTAACTTCTGCTCCATATAATCACAGGCTTTaGACAGGATTCCACCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSKPASQSTQVRILTSAPYNHRL*TGFHLY Trigger: GTAAAGGTGGAATCCTGTCCAAAGCCTGTGATTATA...TGGAGCAGAAGTTAAGATGCGTACCTGAGTACTCTGGGAAGCAGGCTTACTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CCA 90 bp | AAGCCTGCTTCCCAGAGTACTCAGGTACGCATCTTAACTTCTGCTCCAGAGAAATATAATCACAGGCTTTaGACAGGATTCCACCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KPASQSTQVRILTSAPEKYNHRL*TGFHLY Trigger: GTAAAGGTGGAATCCTGTCCAAAGCCTGTGATTATA...TTTCTCTGGAGCAGAAGTTAAGATGCGTACCTGAGTACTCTGGGAAGCAGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | GAAGGCGCACCAGACCCGGGGACTGCACAGAGGGAGCAGGCCGGGCTGTCAGTGGTTTCTCATCTCGAGTaGTCCTGGGAGCCTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: EGAPDPGTAQREQAGLSVVSHLE*SWEPLT Trigger: AGTCAGAGGCTCCCAGGACAACTCGAGATGAGAAAC...CACTGACAGCCCGGCCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | CATGCAGTGTGCCGAAGGCGCACCAGACCCGGGGACTGCACAGAGGGAGCAGGCAAGACGTACTTGACGTaGGGGTCAGGAAAAGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HAVCRRRTRPGDCTEGAGKTYLT*GSGKVA Trigger: TGCCACTTTTCCTGACCCCAACGTCAAGTACGTCTT...GCCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | GAGCCTTCCGTAGGGGCCTCGGCTGCTCATTGGGCCCCCTTCTACTCCTGGGATTGTACAATCCAGTTGTaGATCTTGTCCCGGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: EPSVGASAAHWAPFYSWDCTIQL*ILSRRR Trigger: CCGCCGCCGGGACAAGATCAACAACTGGATTGTACA...ATCCCAGGAGTAGAAGGGGGCCCAATGAGCAGCCGAGGCCCCTACGGAAGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | CGAAGGCGCACCAGACCCGGGGACTGCACAGAGGGAGCAGGCCGGGCTGTCAGTCAGTCTGGGATGATTTaGGACAGCTGTACAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRRTRPGDCTEGAGRAVSQSGMI*DSCTIQ Trigger: CTGGATTGTACAGCTGTCCAAAATCATCCCAGACTG...ACTGACAGCCCGGCCTGCTCCCTCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | GAGCCTTCCGTAGGGGCCTCGGCTGCTCATTGGGCCCCCTTCTACTCCTGGGATGTTTCTCATCTCGAGTaGTCCTGGGAGCCTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: EPSVGASAAHWAPFYSWDVSHLE*SWEPLT Trigger: AGTCAGAGGCTCCCAGGACAACTCGAGATGAGAAAC...ATCCCAGGAGTAGAAGGGGGCCCAATGAGCAGCCGAGGCCCCTACGGAAGGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | GGAGACAGCACATGCAGTGTGCCGAAGGCGCACCAGACCCGGGGACTGCACAGAGTTCGGAAGACGTACTaGACGTTGGGGTCAGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GDSTCSVPKAHQTRGLHRVRKTY*TLGSGK Trigger: TTTTCCTGACCCCAACGTCAAGTACGTCTTCCGAAC...TCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | GAGCAGGGAAGGCTCTCAGTGAACCCACCCCTGCCTACAGTTCTCCCTGGCTCCGTTTCTCATCTCGAGTaGTCCTGGGAGCCTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: EQGRLSVNPPLPTVLPGSVSHLE*SWEPLT Trigger: AGTCAGAGGCTCCCAGGACAACTCGAGATGAGAAAC...GGAGCCAGGGAGAACTGTAGGCAGGGGTGGGTTCACTGAGAGCCTTCCCTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | GGAGACAGCACATGCAGTGTGCCGAAGGCGCACCAGACCCGGGGACTGCACAGAAGCAGGTTCTTGTTCTaGAGATCTTCCACCTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GDSTCSVPKAHQTRGLHRSRFLF*RSSTCC Trigger: GCAACAGGTGGAAGATCTCAAGAACAAGAACCTGCT...TCTGTGCAGTCCCCGGGTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS TCA 90 bp | GTTAGTCTGACCTGTTGCCGGAGCACATCGTTGTCCAGCTGCAACTaGTCTAACCCCTGCAGCTCTTCAGACAGCCGGTGGTTGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSLTCCRSTSLSSCN*SNPCSSSDSRWLLC Trigger: GCAGAGCAACCACCGGCTGTCTGAAGAGCTGCAGGGGTTAGATCAGTTGCAGCTGGACAACGATGTGCTCCGGCAACAGGTCAGACTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160486.8 |
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| CDS-3UTR CAA 90 bp | GTCCCTCTCTCAGGCACTCCAAGCGAGCACACGGCAAGCCCAGATTCAGTGTGTCATCATCACAAAGAATaGACCTGTGCTGGGCGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VPLSGTPSEHTASPDSVCHHHKE*TCAGRG Trigger: ACCCCGCCCAGCACAGGTCAATTCTTTGTGATGATG...ACACACTGAATCTGGGCTTGCCGTGTGCTCGCTTGGAGTGCCTGAGAGAGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | CGGCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTGTACAATCCAGTTGTaGATCTTGTCCCGGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RQAQIQCVQCPARRQHMQCTIQL*ILSRRR Trigger: CCGCCGCCGGGACAAGATCAACAACTGGATTGTACA...CTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGGGCTTGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | CTCTCAGGCACTCCAAGCGAGCACACGGCAAGCCCAGATTCAGTGTGTCCAGTGTTACTCTGGCCAGACTaGGTGCTCTCCATAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSGTPSEHTASPDSVCPVLLWPD*VLSIEQ Trigger: CTGCTCTATGGAGAGCACCAAGTCTGGCCAGAGTAA...CACTGGACACACTGAATCTGGGCTTGCCGTGTGCTCGCTTGGAGTGCCTGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | CAGCCATGGTTCCTGCAGCCGCACTTGTGTGACTGTGACGCAGAACTGCAAGCCCGCAGGAGCAGGTTCTaGTTCTTGAGATCTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: QPWFLQPHLCDCDAELQARRSRF*FLRSST Trigger: GGTGGAAGATCTCAAGAACAAGAACCTGCTCCTGCG...GGCTTGCAGTTCTGCGTCACAGTCACACAAGTGCGGCTGCAGGAACCATGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161241.8 |
||
| CDS-3UTR CAA 90 bp | ACGGCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCATGTACAATCCAGTTGTaGATCTTGTCCCGGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TASPDSVCPVSSKETAHACTIQL*ILSRRR Trigger: CCGCCGCCGGGACAAGATCAACAACTGGATTGTACA...TGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGGGCTTGCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | GTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTGTGCCGAAGGCGCACCAGACAGCAGGTTCTTGTTCTaGAGATCTTCCACCTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: VQCPARRQHMQCAEGAPDSRFLF*RSSTCC Trigger: GCAACAGGTGGAAGATCTCAAGAACAAGAACCTGCT...GTCTGGTGCGCCTTCGGCACACTGCATGTGCTGTCTCCTTGCTGGACACTGGAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | ACTCCAAGCGAGCACACGGCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGCGCAGGAGCAGGTTCTaGTTCTTGAGATCTTCCACC | + |
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Preference number: 5 (lower is better) Translates to: TPSEHTASPDSVCPVSSKRRSRF*FLRSST Trigger: GGTGGAAGATCTCAAGAACAAGAACCTGCTCCTGCG...CTTGCTGGACACTGGACACACTGAATCTGGGCTTGCCGTGTGCTCGCTTGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | GCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTGTGCCAAGACGTACTTGACGTaGGGGTCAGGAAAAGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: AQIQCVQCPARRQHMQCAKTYLT*GSGKVA Trigger: TGCCACTTTTCCTGACCCCAACGTCAAGTACGTCTT...GGCACACTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | GCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTGTGCCGTTCGGAAGACGTACTaGACGTTGGGGTCAGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: AQIQCVQCPARRQHMQCAVRKTY*TLGSGK Trigger: TTTTCCTGACCCCAACGTCAAGTACGTCTTCCGAAC...GGCACACTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | GCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTGCATCATCACAAAGAATaGACCTGTGCTGGGCGGGGT | + |
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Preference number: 5 (lower is better) Translates to: ASPDSVCPVSSKETAHAVHHHKE*TCAGRG Trigger: ACCCCGCCCAGCACAGGTCAATTCTTTGTGATGATG...CACTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGGGCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | CTCTCAGGCACTCCAAGCGAGCACACGGCAAGCCCAGATTCAGTGTGTCCAGTGCAGTCTGGGATGATTTaGGACAGCTGTACAATCCAG | + |
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Preference number: 5 (lower is better) Translates to: LSGTPSEHTASPDSVCPVQSGMI*DSCTIQ Trigger: CTGGATTGTACAGCTGTCCAAAATCATCCCAGACTG...CACTGGACACACTGAATCTGGGCTTGCCGTGTGCTCGCTTGGAGTGCCTGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | ACTTCTGCTCCAGAGAAAGGAAGAGCCAGTGGAAGTACTAGGCCCGCAGTCCCTTTACTCTGGCCAGACTaGGTGCTCTCCATAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: TSAPEKGRASGSTRPAVPLLWPD*VLSIEQ Trigger: CTGCTCTATGGAGAGCACCAAGTCTGGCCAGAGTAA...AGGGACTGCGGGCCTAGTACTTCCACTGGCTCTTCCTTTCTCTGGAGCAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | GAAGCAAGGGCATGGCCCCTGGAGTATACACACACAGAGTCCAATCGCACCAGTTTACTCTGGCCAGACTaGGTGCTCTCCATAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: EARAWPLEYTHTESNRTSLLWPD*VLSIEQ Trigger: CTGCTCTATGGAGAGCACCAAGTCTGGCCAGAGTAA...ACTGGTGCGATTGGACTCTGTGTGTGTATACTCCAGGGGCCATGCCCTTGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161241.8 |
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| CDS-3UTR CAA 90 bp | GGCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTAAGACGTACTTGACGTaGGGGTCAGGAAAAGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: GKPRFSVSSVQQGDSTCSKTYLT*GSGKVA Trigger: TGCCACTTTTCCTGACCCCAACGTCAAGTACGTCTT...ACTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGGGCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | GGCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGTCTCCACTTCGTTATGTaGAGCCCTCCGTTTCTCATC | + |
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Preference number: 5 (lower is better) Translates to: GKPRFSVSSVQQGDSTCSLHFVM*SPPFLI Trigger: GATGAGAAACGGAGGGCTCAACATAACGAAGTGGAG...ACTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGGGCTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | ACTTCTGCTCCAGAGAAAGGAAGAGCCAGTGGAAGTACTAGGCCCGCAGTCCCTCTCCACTTCGTTATGTaGAGCCCTCCGTTTCTCATC | + |
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Preference number: 5 (lower is better) Translates to: TSAPEKGRASGSTRPAVPLHFVM*SPPFLI Trigger: GATGAGAAACGGAGGGCTCAACATAACGAAGTGGAG...AGGGACTGCGGGCCTAGTACTTCCACTGGCTCTTCCTTTCTCTGGAGCAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | CGGCAAGCCCAGATTCAGTGTGTCCAGTGTCCAGCAAGGAGACAGCACATGCAGCAGTCTGGGATGATTTaGGACAGCTGTACAATCCAG | + |
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Preference number: 5 (lower is better) Translates to: RQAQIQCVQCPARRQHMQQSGMI*DSCTIQ Trigger: CTGGATTGTACAGCTGTCCAAAATCATCCCAGACTG...CTGCATGTGCTGTCTCCTTGCTGGACACTGGACACACTGAATCTGGGCTTGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | CACCTCTTGAGTAAGCCTGCTTCCCAGAGTACTCAGGTACGCATCTTAACTTCTCATCATCACAAAGAATaGACCTGTGCTGGGCGGGGT | + |
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Preference number: 5 (lower is better) Translates to: HLLSKPASQSTQVRILTSHHHKE*TCAGRG Trigger: ACCCCGCCCAGCACAGGTCAATTCTTTGTGATGATG...AGAAGTTAAGATGCGTACCTGAGTACTCTGGGAAGCAGGCTTACTCAAGAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS-3UTR CAA 90 bp | CACCTCTTGAGTAAGCCTGCTTCCCAGAGTACTCAGGTACGCATCTTAACTTCTCTCCACTTCGTTATGTaGAGCCCTCCGTTTCTCATC | + |
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Preference number: 5 (lower is better) Translates to: HLLSKPASQSTQVRILTSLHFVM*SPPFLI Trigger: GATGAGAAACGGAGGGCTCAACATAACGAAGTGGAG...AGAAGTTAAGATGCGTACCTGAGTACTCTGGGAAGCAGGCTTACTCAAGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160486.8 ENSMUST00000161241.8 ENSMUST00000167546.2 |
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| CDS TCA 72 bp | TACGGGGCTGCCAAGGGGGCCATCCTGGAGTTAGTCTaGCCTGTTGCCGGAGCACATCGTTGTCCAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: YGAAKGAILELV*PVAGAHRCPAA Trigger: TGCAGCTGGACAACGATGTGCTCCGGCAACAGGTCAGACTAACTCCAGGATGGCCCCCTTGGCAGCCCCGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160486.8 |
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