Pregenerated sensors for UROS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030979Ensembl transcript IDs: ENSMUST00000033276.11, ENSMUST00000106144.8, ENSMUST00000106145.10, ENSMUST00000106146.8, ENSMUST00000209636.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGAGGGGATCTGCCACCCTTACTTTGCTTCTCCAGGCACTGGCTATaGACAGGGCACACAGATGTACATGCAGACAAGACACCGATAAAC | + |
|
Preference number: 1 (lower is better) Translates to: RGDLPPLLCFSRHWL*TGHTDVHADKTPIN Trigger: GTTTATCGGTGTCTTGTCTGCATGTACATCTGTGTGCCCTGTGCATAGCCAGTGCCTGGAGAAGCAAAGTAAGGGTGGCAGATCCCCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR GCA 90 bp | CAGATGTCTCTAACTCTAGTTCGAGGGGATCTGCCACCCTTACTTTaGTTCTCCAGGCACTGGCTATGCACAGGGCACACAGATGTACAT | + |
|
Preference number: 1 (lower is better) Translates to: QMSLTLVRGDLPPLL*FSRHWLCTGHTDVH Trigger: ATGTACATCTGTGTGCCCTGTGCATAGCCAGTGCCTGGAGAAGCAAAGTAAGGGTGGCAGATCCCCTCGAACTAGAGTTAGAGACATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR CCA 90 bp | TACTTATTCTTTCAGAGGACCTGGGTTCAATTCCCAGTACCTGGATaGCAGCTCACAGATGTCTCTAACTCTAGTTCGAGGGGATCTGCC | + |
|
Preference number: 1 (lower is better) Translates to: YLFFQRTWVQFPVPG*QLTDVSNSSSRGSA Trigger: GGCAGATCCCCTCGAACTAGAGTTAGAGACATCTGTGAGCTGCCATCCAGGTACTGGGAATTGAACCCAGGTCCTCTGAAAGAATAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR TCA 90 bp | CAGAGAGCCTATGATGTTCTGTTGTCCCAGAACACCACTTTGCACTaGGAACCACAGATGATAATAGTAGGCTGGAGTTATGGCTCAGTG | + |
|
Preference number: 1 (lower is better) Translates to: QRAYDVLLSQNTTLH*EPQMIIVGWSYGSV Trigger: CACTGAGCCATAACTCCAGCCTACTATTATCATCTGTGGTTCTCAGTGCAAAGTGGTGTTCTGGGACAACAGAACATCATAGGCTCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR TCA 90 bp | AGAACCACAGATGATAATAGTAGGCTGGAGTTATGGCTCAGTGGTTaGGAGTACTTATTCTTTCAGAGGACCTGGGTTCAATTCCCAGTA | + |
|
Preference number: 1 (lower is better) Translates to: RTTDDNSRLELWLSG*EYLFFQRTWVQFPV Trigger: TACTGGGAATTGAACCCAGGTCCTCTGAAAGAATAAGTACTCTCAACCACTGAGCCATAACTCCAGCCTACTATTATCATCTGTGGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR GCA 90 bp | TTGCTTCTCCAGGCACTGGCTATGCACAGGGCACACAGATGTACATaGAGACAAGACACCGATAAACATAAAAGAAATACAGTTTGTAAA | + |
|
Preference number: 1 (lower is better) Translates to: LLLQALAMHRAHRCT*RQDTDKHKRNTVCK Trigger: TTTACAAACTGTATTTCTTTTATGTTTATCGGTGTCTTGTCTGCATGTACATCTGTGTGCCCTGTGCATAGCCAGTGCCTGGAGAAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTCAGCATCAGAGAGCCTATGATGTTCTGTTGTCCCAGAACACCACTTTGCACTGCTTCTCCAGGCACTaGCTATGCACAGGGCACACA | + |
|
Preference number: 2 (lower is better) Translates to: GQHQRAYDVLLSQNTTLHCFSRH*LCTGHT Trigger: TGTGTGCCCTGTGCATAGCCAGTGCCTGGAGAAGCA...GTGCAAAGTGGTGTTCTGGGACAACAGAACATCATAGGCTCTCTGATGCTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR CAA 90 bp | ACAGATGTCTCTAACTCTAGTTCGAGGGGATCTGCCACCCTTACTTaGCTTCTCCAGGCACTGGCTATGCACAGGGCACACAGATGTACA | + |
|
Preference number: 2 (lower is better) Translates to: TDVSNSSSRGSATLT*LLQALAMHRAHRCT Trigger: TGTACATCTGTGTGCCCTGTGCATAGCCAGTGCCTGGAGAAGCAAAGTAAGGGTGGCAGATCCCCTCGAACTAGAGTTAGAGACATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTCTTTCAGAGGACCTGGGTTCAATTCCCAGTACCTGGATGGCAGCTCACAGACAGTTTGTAAAAGAGTaGGCACAAGTCACCACATGG | + |
|
Preference number: 2 (lower is better) Translates to: ILSEDLGSIPSTWMAAHRQFVKE*AQVTTW Trigger: CCATGTGGTGACTTGTGCCCACTCTTTTACAAACTG...TCTGTGAGCTGCCATCCAGGTACTGGGAATTGAACCCAGGTCCTCTGAAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCCCAGAACACCACTTTGCACTGAGAACCACAGATGATAATAGTAGGCTGGAGTCAATTCCCAGTACCTaGATGGCAGCTCACAGATGT | + |
|
Preference number: 2 (lower is better) Translates to: VPEHHFALRTTDDNSRLESIPST*MAAHRC Trigger: ACATCTGTGAGCTGCCATCCAGGTACTGGGAATTGA...CTCCAGCCTACTATTATCATCTGTGGTTCTCAGTGCAAAGTGGTGTTCTGGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGTACTTATTCTTTCAGAGGACCTGGGTTCAATTCCCAGTACCTGGATGGCGCACACAGATGTACATaGAGACAAGACACCGATAAA | + |
|
Preference number: 2 (lower is better) Translates to: ESTYSFRGPGFNSQYLDGAHRCT*RQDTDK Trigger: TTTATCGGTGTCTTGTCTGCATGTACATCTGTGTGC...GCCATCCAGGTACTGGGAATTGAACCCAGGTCCTCTGAAAGAATAAGTACTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTTATCATTCTTATCAGGTCAGCATCAGAGAGCCTATGATGTTCTGTTGTCCCCTGCCACCCTTACTTTaGTTCTCCAGGCACTGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: IYHSYQVSIREPMMFCCPLPPLL*FSRHWL Trigger: TAGCCAGTGCCTGGAGAAGCAAAGTAAGGGTGGCAG...GGGACAACAGAACATCATAGGCTCTCTGATGCTGACCTGATAAGAATGATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR TCA 72 bp | TGGCGTAGGCTCCAAGCTGGACTCCATGGAGGACGGTaGCATGCTCACAGGCAGCTTCTCCAGATCTCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: WRRLQAGLHGGR*HAHRQLLQISP Trigger: CGGAGAGATCTGGAGAAGCTGCCTGTGAGCATGTCACCGTCCTCCATGGAGTCCAGCTTGGAGCCTACGCCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR CCA 72 bp | GGGGATCTGCCACCCTTACTTTGCTTCTCCAGGCACTaGCTATGCACAGGGCACACAGATGTACATGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GDLPPLLCFSRH*LCTGHTDVHAD Trigger: GTCTGCATGTACATCTGTGTGCCCTGTGCATAGCCAGTGCCTGGAGAAGCAAAGTAAGGGTGGCAGATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR GCA 72 bp | CTAACTCTAGTTCGAGGGGATCTGCCACCCTTACTTTaGTTCTCCAGGCACTGGCTATGCACAGGGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: LTLVRGDLPPLL*FSRHWLCTGHT Trigger: TGTGTGCCCTGTGCATAGCCAGTGCCTGGAGAAGCAAAGTAAGGGTGGCAGATCCCCTCGAACTAGAGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR GCA 72 bp | CTGCCACCCTTACTTTGCTTCTCCAGGCACTGGCTATaGACAGGGCACACAGATGTACATGCAGACAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LPPLLCFSRHWL*TGHTDVHADKT Trigger: TGTCTTGTCTGCATGTACATCTGTGTGCCCTGTGCATAGCCAGTGCCTGGAGAAGCAAAGTAAGGGTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGAGAGCCTATGATGTTCTGTTGTCCCAGAACACCACTTTGCACTGAGAACTCTGCCACCCTTACTTaGCTTCTCCAGGCACTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: IREPMMFCCPRTPLCTENSATLT*LLQALA Trigger: AGCCAGTGCCTGGAGAAGCAAAGTAAGGGTGGCAGA...GTTCTCAGTGCAAAGTGGTGTTCTGGGACAACAGAACATCATAGGCTCTCTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR TCA 72 bp | TGGGGGATGATTAACTATAGATCACAGGGTACCTGCTaGGTTCTCTTTCTAGTGAAGTGCTGCAGGTATCAC | + |
|
Preference number: 3 (lower is better) Translates to: WGMINYRSQGTC*VLFLVKCCRYH Trigger: GTGATACCTGCAGCACTTCACTAGAAAGAGAACTCAGCAGGTACCCTGTGATCTATAGTTAATCATCCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106144.8 |
||
| 3UTR TCA 72 bp | ATTGGTACCAACATGAAGAGCGAACAGACTGGGGGATaGTTAACTATAGATCACAGGGTACCTGCTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: IGTNMKSEQTGG*LTIDHRVPAEF Trigger: GAACTCAGCAGGTACCCTGTGATCTATAGTTAATCATCCCCCAGTCTGTTCGCTCTTCATGTTGGTACCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106144.8 |
||
| 3UTR GCA 72 bp | CAGGCACTGGCTATGCACAGGGCACACAGATGTACATaGAGACAAGACACCGATAAACATAAAAGAAATACA | + |
|
Preference number: 3 (lower is better) Translates to: QALAMHRAHRCT*RQDTDKHKRNT Trigger: TGTATTTCTTTTATGTTTATCGGTGTCTTGTCTGCATGTACATCTGTGTGCCCTGTGCATAGCCAGTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR CCA 72 bp | TGTAAATATTGGTACCAACATGAAGAGCGAACAGACTaGGGGATGATTAACTATAGATCACAGGGTACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CKYWYQHEERTD*GMINYRSQGTC Trigger: GCAGGTACCCTGTGATCTATAGTTAATCATCCCCCAGTCTGTTCGCTCTTCATGTTGGTACCAATATTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106144.8 |
||
| 3UTR CCA 72 bp | CTGGTGGATGTTTTATTCAAACTGCTCTGTAAATATTaGTACCAACATGAAGAGCGAACAGACTGGGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LVDVLFKLLCKY*YQHEERTDWGM Trigger: CATCCCCCAGTCTGTTCGCTCTTCATGTTGGTACCAATATTTACAGAGCAGTTTGAATAAAACATCCACCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106144.8 |
||
| 3UTR TCA 72 bp | TATGATGTTCTGTTGTCCCAGAACACCACTTTGCACTaGGAACCACAGATGATAATAGTAGGCTGGAGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: YDVLLSQNTTLH*EPQMIIVGWSY Trigger: ATAACTCCAGCCTACTATTATCATCTGTGGTTCTCAGTGCAAAGTGGTGTTCTGGGACAACAGAACATCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR GCA 90 bp | CCCCCTGTGTCGAATGGCAGTGACCTAATGGCCAGTGAACCTGGCGTAGGCTCCTGGGGCTCTCTGCAGTaGAGCTCACAGGCAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPVSNGSDLMASEPGVGSWGSLQ*SSQAGP Trigger: AGGGCCTGCCTGTGAGCTGCACTGCAGAGAGCCCCA...GGAGCCTACGCCAGGTTCACTGGCCATTAGGTCACTGCCATTCGACACAGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | CTGGACTCCATGGAGGACGGTGACATGCTCACAGGCAGCTTCTCCAGATCTCTCCCAGGGCTTGTGGTGTaGGGCTCTCTGCAGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDSMEDGDMLTGSFSRSLPGLVV*GSLQCS Trigger: GCTGCACTGCAGAGAGCCCCACACCACAAGCCCTGG...GAGAGATCTGGAGAAGCTGCCTGTGAGCATGTCACCGTCCTCCATGGAGTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | CGAGGGGATCTGCCACCCTTACTTTGCTTCTCCAGGCACTGGCTATGCACAGGGTGCAGCCAGGGCTTGTaGTGTGGGGCTCTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGDLPPLLCFSRHWLCTGCSQGL*CGALCS Trigger: ACTGCAGAGAGCCCCACACCACAAGCCCTGGCTGCA...CCCTGTGCATAGCCAGTGCCTGGAGAAGCAAAGTAAGGGTGGCAGATCCCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR GCA 90 bp | AGGACGGTGACATGCTCACAGGCAGCTTCTCCAGATCTCTCCGAATCTGCGTTCTGGTGTGGGGCTCTCTaGAGTGCAGCTCACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTVTCSQAASPDLSESAFWCGAL*SAAHRQ Trigger: CTGCCTGTGAGCTGCACTGCAGAGAGCCCCACACCA...GAACGCAGATTCGGAGAGATCTGGAGAAGCTGCCTGTGAGCATGTCACCGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCTTTCTAGACCCAGGAAGCTTTCTCTCCCCCTGTGTCGAATGGCAGTGCCAGGGCTTGTGGTGTaGGGCTCTCTGCAGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLLSRPRKLSLPLCRMAVPGLVV*GSLQCS Trigger: GCTGCACTGCAGAGAGCCCCACACCACAAGCCCTGG...CACTGCCATTCGACACAGGGGGAGAGAAAGCTTCCTGGGTCTAGAAAGAAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | GTGACATGCTCACAGGCAGCTTCTCCAGATCTCTCCGAATCTGCGTTCCATCCTTGCAGCCAGGGCTTGTaGTGTGGGGCTCTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTCSQAASPDLSESAFHPCSQGL*CGALCS Trigger: ACTGCAGAGAGCCCCACACCACAAGCCCTGGCTGCA...AGGATGGAACGCAGATTCGGAGAGATCTGGAGAAGCTGCCTGTGAGCATGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTCTTTCTAGACCCAGGAAGCTTTCTCTCCCCCTGTGTCGAATGGCAGTGTGGTGTGGGGCTCTCTaGAGTGCAGCTCACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLSRPRKLSLPLCRMAVWCGAL*SAAHRQ Trigger: CTGCCTGTGAGCTGCACTGCAGAGAGCCCCACACCA...CACTGCCATTCGACACAGGGGGAGAGAAAGCTTCCTGGGTCTAGAAAGAAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCAGAACACCACTTTGCACTGAGAACCACAGATGATAATAGTAGGCTGGAGTGGGGCTCTCTGCAGTaGAGCTCACAGGCAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPEHHFALRTTDDNSRLEWGSLQ*SSQAGP Trigger: AGGGCCTGCCTGTGAGCTGCACTGCAGAGAGCCCCA...CTCCAGCCTACTATTATCATCTGTGGTTCTCAGTGCAAAGTGGTGTTCTGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| 3UTR CAA 72 bp | TCTAACTCTAGTTCGAGGGGATCTGCCACCCTTACTTaGCTTCTCCAGGCACTGGCTATGCACAGGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SNSSSRGSATLT*LLQALAMHRAH Trigger: GTGTGCCCTGTGCATAGCCAGTGCCTGGAGAAGCAAAGTAAGGGTGGCAGATCCCCTCGAACTAGAGTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGTACTTATTCTTTCAGAGGACCTGGGTTCAATTCCCAGTACCTGGATGGCTGGTGTGGGGCTCTCTaGAGTGCAGCTCACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESTYSFRGPGFNSQYLDGWCGAL*SAAHRQ Trigger: CTGCCTGTGAGCTGCACTGCAGAGAGCCCCACACCA...GCCATCCAGGTACTGGGAATTGAACCCAGGTCCTCTGAAAGAATAAGTACTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | GTGACATGCTCACAGGCAGCTTCTCCAGATCTCTCCGAATCTGCGTTCCATCCTCACAATCGCAGCTCCTaGATATATGGATCCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VTCSQAASPDLSESAFHPHNRSS*IYGSRP Trigger: CGGCCTGGATCCATATATCCAGGAGCTGCGATTGTG...AGGATGGAACGCAGATTCGGAGAGATCTGGAGAAGCTGCCTGTGAGCATGTCAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGAGAGCCTATGATGTTCTGTTGTCCCAGAACACCACTTTGCACTGAGAACCCAGGGCTTGTGGTGTaGGGCTCTCTGCAGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IREPMMFCCPRTPLCTENPGLVV*GSLQCS Trigger: GCTGCACTGCAGAGAGCCCCACACCACAAGCCCTGG...GTTCTCAGTGCAAAGTGGTGTTCTGGGACAACAGAACATCATAGGCTCTCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR TCA 90 bp | GCTAGAGCTCTTCCTACAGGAAGCCAAACAGCTCAACTTCCCAGCAATCTTCGTGGAAGAGGAGGGACCTaGGGAAGTCTCCACAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: ARALPTGSQTAQLPSNLRGRGGT*GSLHRQ Trigger: TTGTCTGTGGAGACTTCCTCAGGTCCCTCCTCTTCC...ACGAAGATTGCTGGGAAGTTGAGCTGTTTGGCTTCCTGTAGGAAGAGCTCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106144.8 |
||
| CDS-3UTR TCA 90 bp | AACTTCCCAGCAATCTTCGTCCCAAAGGCAGCCAAAGAGCGTCTGGATGATTCAACTGCCAGGGAAGACTaGGTGCAGGAGTTGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NFPAIFVPKAAKERLDDSTARED*VQELEE Trigger: CTCTTCCAACTCCTGCACTCAGTCTTCCCTGGCAGT...TGAATCATCCAGACGCTCTTTGGCTGCCTTTGGGACGAAGATTGCTGGGAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106144.8 |
||
| CDS-3UTR CCA 90 bp | ATGGAGGACGGTGACATGCTCACAGGCAGCTTCTCCAGATCTCTCCGAATCTGCTTGGATCCCAGGGTGTaGAACTGTCTGATAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: MEDGDMLTGSFSRSLRICLDPRV*NCLIDM Trigger: CATGTCTATCAGACAGTTCCACACCCTGGGATCCAA...GCAGATTCGGAGAGATCTGGAGAAGCTGCCTGTGAGCATGTCACCGTCCTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR TCA 90 bp | TACAGGAAGCCAAACAGCTCAACTTCCCAGCAATCTTCGTCCCAAAGGCAGCCAGATGTAGGTAAGAACTaGGATGCGCACTTCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YRKPNSSTSQQSSSQRQPDVGKN*DAHFCL Trigger: GAGGCAGAAGTGCGCATCTCAGTTCTTACCTACATC...TGGCTGCCTTTGGGACGAAGATTGCTGGGAAGTTGAGCTGTTTGGCTTCCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106144.8 |
||
| CDS-3UTR CCA 90 bp | ATGGAGGACGGTGACATGCTCACAGGCAGCTTCTCCAGATCTCTCCGAATCTGCTCAGCAACAGTGGTTTaGCTTCAGCACATTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: MEDGDMLTGSFSRSLRICSATVV*LQHIPD Trigger: ATCAGGAATGTGCTGAAGCCAAACCACTGTTGCTGA...GCAGATTCGGAGAGATCTGGAGAAGCTGCCTGTGAGCATGTCACCGTCCTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCAGAACACCACTTTGCACTGAGAACCACAGATGATAATAGTAGGCTGGAGCACAATCGCAGCTCCTaGATATATGGATCCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VPEHHFALRTTDDNSRLEHNRSS*IYGSRP Trigger: CGGCCTGGATCCATATATCCAGGAGCTGCGATTGTG...CTCCAGCCTACTATTATCATCTGTGGTTCTCAGTGCAAAGTGGTGTTCTGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTTCGAGGGGATCTGCCACCCTTACTTTGCTTCTCCAGGCACTGGCTATGCCACGTACACAGACTTaGCATTCCATCTGTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSRGSATLTLLLQALAMPRTQT*HSICLS Trigger: TGAAAGACAGATGGAATGCCAAGTCTGTGTACGTGG...CATAGCCAGTGCCTGGAGAAGCAAAGTAAGGGTGGCAGATCCCCTCGAACTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCTTTCTAGACCCAGGAAGCTTTCTCTCCCCCTGTGTCGAATGGCAGTGTTGGATCCCAGGGTGTaGAACTGTCTGATAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: FLLSRPRKLSLPLCRMAVLDPRV*NCLIDM Trigger: CATGTCTATCAGACAGTTCCACACCCTGGGATCCAA...CACTGCCATTCGACACAGGGGGAGAGAAAGCTTCCTGGGTCTAGAAAGAAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAACTGCTCTGTAAATATTGGTACCAACATGAAGAGCGAACAGACTGGGGGCACTTCTGCCTCAACTaGAGGCTACCTGGAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: FKLLCKYWYQHEERTDWGHFCLN*RLPGAW Trigger: CCATGCTCCAGGTAGCCTTCAGTTGAGGCAGAAGTG...CCCCCAGTCTGTTCGCTCTTCATGTTGGTACCAATATTTACAGAGCAGTTTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106144.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGTCACCACATGGTCGATTTCAGTTCCTTCTTTCTAGACCCAGGAAGCTTCACAATCGCAGCTCCTaGATATATGGATCCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HKSPHGRFQFLLSRPRKLHNRSS*IYGSRP Trigger: CGGCCTGGATCCATATATCCAGGAGCTGCGATTGTG...AAGCTTCCTGGGTCTAGAAAGAAGGAACTGAAATCGACCATGTGGTGACTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCAGTGGTTGAGAGTACTTATTCTTTCAGAGGACCTGGGTTCAATTCCCAGGCACAGGAATCAGTGTaGCTTCTAGGCCACACAATC | + |
|
Preference number: 4 (lower is better) Translates to: GSVVESTYSFRGPGFNSQAQESV*LLGHTI Trigger: GATTGTGTGGCCTAGAAGCCACACTGATTCCTGTGC...CTGGGAATTGAACCCAGGTCCTCTGAAAGAATAAGTACTCTCAACCACTGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | GGGTACCTGCTGAGTTCTCTTTCTAGTGAAGTGCTGCAGGTATCACTCCTAGGCCCACGTACACAGACTTaGCATTCCATCTGTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GYLLSSLSSEVLQVSLLGPRTQT*HSICLS Trigger: TGAAAGACAGATGGAATGCCAAGTCTGTGTACGTGG...GCCTAGGAGTGATACCTGCAGCACTTCACTAGAAAGAGAACTCAGCAGGTACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106144.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTGTAAATATTGGTACCAACATGAAGAGCGAACAGACTGGGGGATGATTCACAATCGCAGCTCCTaGATATATGGATCCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLCKYWYQHEERTDWGMIHNRSS*IYGSRP Trigger: CGGCCTGGATCCATATATCCAGGAGCTGCGATTGTG...AATCATCCCCCAGTCTGTTCGCTCTTCATGTTGGTACCAATATTTACAGAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106144.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGTACTTATTCTTTCAGAGGACCTGGGTTCAATTCCCAGTACCTGGATGGCACTGCCCGCTCCTTCTaGATCCAGACCAATTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: ESTYSFRGPGFNSQYLDGTARSF*IQTNFI Trigger: AATAAAATTGGTCTGGATGCAGAAGGAGCGGGCAGT...GCCATCCAGGTACTGGGAATTGAACCCAGGTCCTCTGAAAGAATAAGTACTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCAGTGGTTGAGAGTACTTATTCTTTCAGAGGACCTGGGTTCAATTCCCAGACTGCCCGCTCCTTCTaGATCCAGACCAATTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: GSVVESTYSFRGPGFNSQTARSF*IQTNFI Trigger: AATAAAATTGGTCTGGATGCAGAAGGAGCGGGCAGT...CTGGGAATTGAACCCAGGTCCTCTGAAAGAATAAGTACTCTCAACCACTGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCAGAACACCACTTTGCACTGAGAACCACAGATGATAATAGTAGGCTGGAGCCACGTACACAGACTTaGCATTCCATCTGTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPEHHFALRTTDDNSRLEPRTQT*HSICLS Trigger: TGAAAGACAGATGGAATGCCAAGTCTGTGTACGTGG...CTCCAGCCTACTATTATCATCTGTGGTTCTCAGTGCAAAGTGGTGTTCTGGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | GTGACATGCTCACAGGCAGCTTCTCCAGATCTCTCCGAATCTGCGTTCCATCCTGTCCTTGAGCATTTTTaGAAGAGTATCTCCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VTCSQAASPDLSESAFHPVLEHF*KSISFD Trigger: ATCAAAGGAGATACTCTTCCAAAAATGCTCAAGGAC...AGGATGGAACGCAGATTCGGAGAGATCTGGAGAAGCTGCCTGTGAGCATGTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGTACTTATTCTTTCAGAGGACCTGGGTTCAATTCCCAGTACCTGGATGGCGGATCCCTTTGTCCTTaGGCATTTTTGGAAGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ESTYSFRGPGFNSQYLDGGSLCP*AFLEEY Trigger: ATACTCTTCCAAAAATGCTCAAGGACAAAGGGATCC...GCCATCCAGGTACTGGGAATTGAACCCAGGTCCTCTGAAAGAATAAGTACTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGAGAGCCTATGATGTTCTGTTGTCCCAGAACACCACTTTGCACTGAGAACCCACGTACACAGACTTaGCATTCCATCTGTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IREPMMFCCPRTPLCTENPRTQT*HSICLS Trigger: TGAAAGACAGATGGAATGCCAAGTCTGTGTACGTGG...GTTCTCAGTGCAAAGTGGTGTTCTGGGACAACAGAACATCATAGGCTCTCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | CACAGATGTACATGCAGACAAGACACCGATAAACATAAAAGAAATACAGTTTGTTGCAGCCAGGGCTTGTaGTGTGGGGCTCTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HRCTCRQDTDKHKRNTVCCSQGL*CGALCS Trigger: ACTGCAGAGAGCCCCACACCACAAGCCCTGGCTGCA...ACAAACTGTATTTCTTTTATGTTTATCGGTGTCTTGTCTGCATGTACATCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGTCACCACATGGTCGATTTCAGTTCCTTCTTTCTAGACCCAGGAAGCTTTCAGCAACAGTGGTTTaGCTTCAGCACATTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HKSPHGRFQFLLSRPRKLSATVV*LQHIPD Trigger: ATCAGGAATGTGCTGAAGCCAAACCACTGTTGCTGA...AAGCTTCCTGGGTCTAGAAAGAAGGAACTGAAATCGACCATGTGGTGACTTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGAGAGCCTATGATGTTCTGTTGTCCCAGAACACCACTTTGCACTGAGAACGGATCCCTTTGTCCTTaGGCATTTTTGGAAGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IREPMMFCCPRTPLCTENGSLCP*AFLEEY Trigger: ATACTCTTCCAAAAATGCTCAAGGACAAAGGGATCC...GTTCTCAGTGCAAAGTGGTGTTCTGGGACAACAGAACATCATAGGCTCTCTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR TCA 90 bp | AAACTGCTCTGTAAATATTGGTACCAACATGAAGAGCGAACAGACTGGGGGATGACCCAGGAGGCCATTTaGGCAAATATATTCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLLCKYWYQHEERTDWGMTQEAI*ANIFSK Trigger: CTTGCTGAATATATTTGCTCAAATGGCCTCCTGGGT...CATCCCCCAGTCTGTTCGCTCTTCATGTTGGTACCAATATTTACAGAGCAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106144.8 |
||
| CDS-3UTR GCA 90 bp | AAACTGCTCTGTAAATATTGGTACCAACATGAAGAGCGAACAGACTGGGGGATGACTGCCCGCTCCTTCTaGATCCAGACCAATTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: KLLCKYWYQHEERTDWGMTARSF*IQTNFI Trigger: AATAAAATTGGTCTGGATGCAGAAGGAGCGGGCAGT...CATCCCCCAGTCTGTTCGCTCTTCATGTTGGTACCAATATTTACAGAGCAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106144.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCAGAACACCACTTTGCACTGAGAACCACAGATGATAATAGTAGGCTGGAGGTCCTTGAGCATTTTTaGAAGAGTATCTCCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VPEHHFALRTTDDNSRLEVLEHF*KSISFD Trigger: ATCAAAGGAGATACTCTTCCAAAAATGCTCAAGGAC...CTCCAGCCTACTATTATCATCTGTGGTTCTCAGTGCAAAGTGGTGTTCTGGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGAGTACTTATTCTTTCAGAGGACCTGGGTTCAATTCCCAGTACCTGGATGGTCCTTGAGCATTTTTaGAAGAGTATCTCCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRVLILSEDLGSIPSTWMVLEHF*KSISFD Trigger: ATCAAAGGAGATACTCTTCCAAAAATGCTCAAGGAC...CATCCAGGTACTGGGAATTGAACCCAGGTCCTCTGAAAGAATAAGTACTCTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAATACAGTTTGTAAAAGAGTGGGCACAAGTCACCACATGGTCGATTTCGGATCCCTTTGTCCTTaGGCATTTTTGGAAGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KRNTVCKRVGTSHHMVDFGSLCP*AFLEEY Trigger: ATACTCTTCCAAAAATGCTCAAGGACAAAGGGATCC...GAAATCGACCATGTGGTGACTTGTGCCCACTCTTTTACAAACTGTATTTCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CCA 90 bp | CACAGATGTACATGCAGACAAGACACCGATAAACATAAAAGAAATACAGTTTGTTTGGATCCCAGGGTGTaGAACTGTCTGATAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: HRCTCRQDTDKHKRNTVCLDPRV*NCLIDM Trigger: CATGTCTATCAGACAGTTCCACACCCTGGGATCCAA...ACAAACTGTATTTCTTTTATGTTTATCGGTGTCTTGTCTGCATGTACATCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CCA 90 bp | GTGGTTTGGCTTCAGCACATTCCTGATGCCTGCAGCCAGGGCTTGTaGTGTGGGGCTCTCTGCAGTGCAGCTCACAGGCAGGCCCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVWLQHIPDACSQGL*CGALCSAAHRQALS Trigger: GCTAAGGGCCTGCCTGTGAGCTGCACTGCAGAGAGCCCCACACCACAAGCCCTGGCTGCAGGCATCAGGAATGTGCTGAAGCCAAACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCTGTGTCGAATGGCAGTGACCTAATGGCCAGTGAACCTGGCGTAGGCTCCGCTCTTCAGGCTCCCTaGGATCCCAGGGTGTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PPVSNGSDLMASEPGVGSALQAP*DPRVWN Trigger: GTTCCACACCCTGGGATCCAAGGGAGCCTGAAGAGC...GGAGCCTACGCCAGGTTCACTGGCCATTAGGTCACTGCCATTCGACACAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CAA 90 bp | GTGACATGCTCACAGGCAGCTTCTCCAGATCTCTCCGAATCTGCGTTCCATCCTGCCTGCAGCCAGGGCTaGTGGTGTGGGGCTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VTCSQAASPDLSESAFHPACSQG*WCGALC Trigger: GCAGAGAGCCCCACACCACAAGCCCTGGCTGCAGGC...AGGATGGAACGCAGATTCGGAGAGATCTGGAGAAGCTGCCTGTGAGCATGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTTCTTTCTAGACCCAGGAAGCTTTCTCTCCCCCTGTGTCGAATGGCAGTGGCCTGCAGCCAGGGCTaGTGGTGTGGGGCTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLLSRPRKLSLPLCRMAVACSQG*WCGALC Trigger: GCAGAGAGCCCCACACCACAAGCCCTGGCTGCAGGC...CACTGCCATTCGACACAGGGGGAGAGAAAGCTTCCTGGGTCTAGAAAGAAGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS TCA 90 bp | ACTGCCCTGGGGCTGGTGAAAATGAGTCCTCCAAAGCCTTCAGGATaGGACAGCTGGATATATGGATCCAGGCCGCTGTCATCCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TALGLVKMSPPKPSG*DSWIYGSRPLSSSL Trigger: CAAGGAGGATGACAGCGGCCTGGATCCATATATCCAGCTGTCTCATCCTGAAGGCTTTGGAGGACTCATTTTCACCAGCCCCAGGGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209636.2 |
||
| CDS-3UTR CAA 90 bp | GGTCAGCATCAGAGAGCCTATGATGTTCTGTTGTCCCAGAACACCACTTTGCACGCTCTTCAGGCTCCCTaGGATCCCAGGGTGTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GQHQRAYDVLLSQNTTLHALQAP*DPRVWN Trigger: GTTCCACACCCTGGGATCCAAGGGAGCCTGAAGAGC...GTGCAAAGTGGTGTTCTGGGACAACAGAACATCATAGGCTCTCTGATGCTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CAA 90 bp | TGTAAAAGAGTGGGCACAAGTCACCACATGGTCGATTTCAGTTCCTTCTTTCTAGCCTGCAGCCAGGGCTaGTGGTGTGGGGCTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CKRVGTSHHMVDFSSFFLACSQG*WCGALC Trigger: GCAGAGAGCCCCACACCACAAGCCCTGGCTGCAGGC...TAGAAAGAAGGAACTGAAATCGACCATGTGGTGACTTGTGCCCACTCTTTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CAA 90 bp | CCATGGAGGACGGTGACATGCTCACAGGCAGCTTCTCCAGATCTCTCCGAATCTTCCATGGGGATCCCTTaGTCCTTGAGCATTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PWRTVTCSQAASPDLSESSMGIP*SLSIFG Trigger: TCCAAAAATGCTCAAGGACAAAGGGATCCCCATGGA...AGATTCGGAGAGATCTGGAGAAGCTGCCTGTGAGCATGTCACCGTCCTCCATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CCA 90 bp | GAGGCTGTATTTAAGGCCGGAGGGACTGAAAAACGTGATGCTGGCTaGGATACCCTGATCTTCATAGTAGCTCTTCAGGCTCCCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: EAVFKAGGTEKRDAG*DTLIFIVALQAPLD Trigger: ATCCAAGGGAGCCTGAAGAGCTACTATGAAGATCAGGGTATCCCAGCCAGCATCACGTTTTTCAGTCCCTCCGGCCTTAAATACAGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CCA 90 bp | CTGATCTTCATAGTAGCTCTTCAGGCTCCCTTGGATCCCAGGGTGTaGAACTGTCTGATAGACATGCATGCTTTCCATGGGGATCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LIFIVALQAPLDPRV*NCLIDMHAFHGDPF Trigger: AAAGGGATCCCCATGGAAAGCATGCATGTCTATCAGACAGTTCCACACCCTGGGATCCAAGGGAGCCTGAAGAGCTACTATGAAGATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CAA 90 bp | GTGACATGCTCACAGGCAGCTTCTCCAGATCTCTCCGAATCTGCGTTCCATCCTGGGATCCCTTTGTCCTaGAGCATTTTTGGAAGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VTCSQAASPDLSESAFHPGIPLS*SIFGRV Trigger: TACTCTTCCAAAAATGCTCAAGGACAAAGGGATCCC...AGGATGGAACGCAGATTCGGAGAGATCTGGAGAAGCTGCCTGTGAGCATGTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CCA 90 bp | CCGCTCCTTCTGCATCCAGACCAATTTTATTCACTAGAGAAGCGGTaGCACTTCCAACCACGTACACAGACTTGGCATTCCATCTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLLLHPDQFYSLEKR*HFQPRTQTWHSICL Trigger: AAGACAGATGGAATGCCAAGTCTGTGTACGTGGTTGGAAGTGCCACCGCTTCTCTAGTGAATAAAATTGGTCTGGATGCAGAAGGAGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033276.11 ENSMUST00000106144.8 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCAGTGGTTGAGAGTACTTATTCTTTCAGAGGACCTGGGTTCAATTCCCAGGGGATCCCTTTGTCCTaGAGCATTTTTGGAAGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GSVVESTYSFRGPGFNSQGIPLS*SIFGRV Trigger: TACTCTTCCAAAAATGCTCAAGGACAAAGGGATCCC...CTGGGAATTGAACCCAGGTCCTCTGAAAGAATAAGTACTCTCAACCACTGAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CAA 90 bp | GAGTACTTATTCTTTCAGAGGACCTGGGTTCAATTCCCAGTACCTGGATGGCAGGGGATCCCTTTGTCCTaGAGCATTTTTGGAAGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: EYLFFQRTWVQFPVPGWQGIPLS*SIFGRV Trigger: TACTCTTCCAAAAATGCTCAAGGACAAAGGGATCCC...CTGCCATCCAGGTACTGGGAATTGAACCCAGGTCCTCTGAAAGAATAAGTACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGAGAGCCTATGATGTTCTGTTGTCCCAGAACACCACTTTGCACTGAGAACTCCATGGGGATCCCTTaGTCCTTGAGCATTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: IREPMMFCCPRTPLCTENSMGIP*SLSIFG Trigger: TCCAAAAATGCTCAAGGACAAAGGGATCCCCATGGA...GTTCTCAGTGCAAAGTGGTGTTCTGGGACAACAGAACATCATAGGCTCTCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CCA 90 bp | GACATGCATGCTTTCCATGGGGATCCCTTTGTCCTTGAGCATTTTTaGAAGAGTATCTCCTTTGATAGTTCCACACGGAAAGAGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DMHAFHGDPFVLEHF*KSISFDSSTRKEKR Trigger: CCTCTTCTCTTTCCGTGTGGAACTATCAAAGGAGATACTCTTCCAAAAATGCTCAAGGACAAAGGGATCCCCATGGAAAGCATGCATGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CCA 72 bp | CTTCAGCACATTCCTGATGCCTGCAGCCAGGGCTTGTaGTGTGGGGCTCTCTGCAGTGCAGCTCACAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LQHIPDACSQGL*CGALCSAAHRQ Trigger: CTGCCTGTGAGCTGCACTGCAGAGAGCCCCACACCACAAGCCCTGGCTGCAGGCATCAGGAATGTGCTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CCA 72 bp | GAGAAGCGGTGGCACTTCCAACCACGTACACAGACTTaGCATTCCATCTGTCTTTCAGAGACTTCTCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: EKRWHFQPRTQT*HSICLSETSPR Trigger: CCTGGGAGAAGTCTCTGAAAGACAGATGGAATGCCAAGTCTGTGTACGTGGTTGGAAGTGCCACCGCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033276.11 ENSMUST00000106144.8 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CAA 90 bp | GCTGGCTGGGATACCCTGATCTTCATAGTAGCTCTTCAGGCTCCCTaGGATCCCAGGGTGTGGAACTGTCTGATAGACATGCATGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AGWDTLIFIVALQAP*DPRVWNCLIDMHAF Trigger: GAAAGCATGCATGTCTATCAGACAGTTCCACACCCTGGGATCCAAGGGAGCCTGAAGAGCTACTATGAAGATCAGGGTATCCCAGCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CAA 90 bp | TACCTGGAGCATGGGAGCGGGATCGCTGTTCACCCAGGAGGCCATTaGAGCAAATATATTCAGCAAGCTTTTCTGCATTTCCACTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: YLEHGSGIAVHPGGH*SKYIQQAFLHFHCP Trigger: CGGGCAGTGGAAATGCAGAAAAGCTTGCTGAATATATTTGCTCAAATGGCCTCCTGGGTGAACAGCGATCCCGCTCCCATGCTCCAGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106144.8 |
||
| CDS CCA 72 bp | ATAGTAGCTCTTCAGGCTCCCTTGGATCCCAGGGTGTaGAACTGTCTGATAGACATGCATGCTTTCCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: IVALQAPLDPRV*NCLIDMHAFHG Trigger: CCCATGGAAAGCATGCATGTCTATCAGACAGTTCCACACCCTGGGATCCAAGGGAGCCTGAAGAGCTACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CAA 72 bp | AGAGAAGCGGTGGCACTTCCAACCACGTACACAGACTaGGCATTCCATCTGTCTTTCAGAGACTTCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: REAVALPTTYTD*AFHLSFRDFSQ Trigger: CTGGGAGAAGTCTCTGAAAGACAGATGGAATGCCAAGTCTGTGTACGTGGTTGGAAGTGCCACCGCTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033276.11 ENSMUST00000106144.8 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CCA 72 bp | TTTAAGGCCGGAGGGACTGAAAAACGTGATGCTGGCTaGGATACCCTGATCTTCATAGTAGCTCTTCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FKAGGTEKRDAG*DTLIFIVALQA Trigger: AGCCTGAAGAGCTACTATGAAGATCAGGGTATCCCAGCCAGCATCACGTTTTTCAGTCCCTCCGGCCTTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CAA 72 bp | GATACCCTGATCTTCATAGTAGCTCTTCAGGCTCCCTaGGATCCCAGGGTGTGGAACTGTCTGATAGACATG | + |
|
Preference number: 6 (lower is better) Translates to: DTLIFIVALQAP*DPRVWNCLIDM Trigger: CATGTCTATCAGACAGTTCCACACCCTGGGATCCAAGGGAGCCTGAAGAGCTACTATGAAGATCAGGGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CCA 72 bp | CTGCATCCAGACCAATTTTATTCACTAGAGAAGCGGTaGCACTTCCAACCACGTACACAGACTTGGCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: LHPDQFYSLEKR*HFQPRTQTWHS Trigger: GGAATGCCAAGTCTGTGTACGTGGTTGGAAGTGCCACCGCTTCTCTAGTGAATAAAATTGGTCTGGATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033276.11 ENSMUST00000106144.8 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CAA 72 bp | CATGGGAGCGGGATCGCTGTTCACCCAGGAGGCCATTaGAGCAAATATATTCAGCAAGCTTTTCTGCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: HGSGIAVHPGGH*SKYIQQAFLHF Trigger: GAAATGCAGAAAAGCTTGCTGAATATATTTGCTCAAATGGCCTCCTGGGTGAACAGCGATCCCGCTCCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106144.8 |
||
| CDS CAA 90 bp | ATGGGGATCCCTTTGTCCTTGAGCATTTTTGGAAGAGTATCTCCTTaGATAGTTCCACACGGAAAGAGAAGAGGCAGCTCTGAAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: MGIPLSLSIFGRVSP*IVPHGKRRGSSEDG Trigger: GCCATCTTCAGAGCTGCCTCTTCTCTTTCCGTGTGGAACTATCAAAGGAGATACTCTTCCAAAAATGCTCAAGGACAAAGGGATCCCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CCA 72 bp | GCTTTCCATGGGGATCCCTTTGTCCTTGAGCATTTTTaGAAGAGTATCTCCTTTGATAGTTCCACACGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: AFHGDPFVLEHF*KSISFDSSTRK Trigger: TTTCCGTGTGGAACTATCAAAGGAGATACTCTTCCAAAAATGCTCAAGGACAAAGGGATCCCCATGGAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||
| CDS CAA 72 bp | CCTTTGTCCTTGAGCATTTTTGGAAGAGTATCTCCTTaGATAGTTCCACACGGAAAGAGAAGAGGCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLSLSIFGRVSP*IVPHGKRRGSS Trigger: AGAGCTGCCTCTTCTCTTTCCGTGTGGAACTATCAAAGGAGATACTCTTCCAAAAATGCTCAAGGACAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033276.11 ENSMUST00000106145.10 ENSMUST00000106146.8 |
||