Pregenerated sensors for UROD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028684Ensembl transcript IDs: ENSMUST00000030446.15, ENSMUST00000130273.8
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCAGGTAGGTGGATCTTTGTGAGTTTGAGGTCGTGTGTGTGTGTGTGTGTGTGTGCTAGACTCCAACTCTaGAAGTTTTATTCTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: AGRWIFVSLRSCVCVCVCARLQL*KFYSPG Trigger: TCCAGGAGAATAAAACTTCCAGAGTTGGAGTCTAGC...ACACACACACACACACACACACGACCTCAAACTCACAAAGATCCACCTACCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTAGGTGGATCTTTGTGAGTTTGAGGTCGTGTGTGTGTGTGTGTGTGTGTGAAGTTTTATTCTCCTaGAAACAATCTCTGTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: AGRWIFVSLRSCVCVCVCEVLFS*KQSLLV Trigger: CACCAACAGAGATTGTTTCCAGGAGAATAAAACTTC...ACACACACACACACACACACACGACCTCAAACTCACAAAGATCCACCTACCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| 3UTR-3UTR CAA 90 bp | GCAGGTAGGTGGATCTTTGTGAGTTTGAGGTCGTGTGTGTGTGTGTGTGTGTGTTGGAAACAATCTCTGTaGGTGGCACTTGAGCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: AGRWIFVSLRSCVCVCVCWKQSL*VALEQK Trigger: TTTCTGCTCAAGTGCCACCAACAGAGATTGTTTCCA...ACACACACACACACACACACACGACCTCAAACTCACAAAGATCCACCTACCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR GCA 90 bp | GCAGGTAGGTGGATCTTTGTGAGTTTGAGGTCGTGTGTGTGTGTGTGTGTGTGTGGATCCAGGTTCCCCTaGAGGGTCACTGCCTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: AGRWIFVSLRSCVCVCVCGSRFP*RVTAFP Trigger: CGGGAAGGCAGTGACCCTGCAGGGGAACCTGGATCC...ACACACACACACACACACACACGACCTCAAACTCACAAAGATCCACCTACCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CCA 90 bp | GCAGGTAGGTGGATCTTTGTGAGTTTGAGGTCGTGTGTGTGTGTGTGTGTGTGTGATGATCATGGGCACTaGTGCCAGGCCTGCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: AGRWIFVSLRSCVCVCVCDDHGH*CQACLL Trigger: CAGAAGGCAGGCCTGGCACCAGTGCCCATGATCATC...ACACACACACACACACACACACGACCTCAAACTCACAAAGATCCACCTACCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR TCA 90 bp | GCAGGAAAGGAGGGGGCTTCAGAAAGAACTGAGGATCAGGACATAAGCCTTTACAGCCATCGTTTGGCCTaGGCCATGGTGCTTGAACTG | + |
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Preference number: 4 (lower is better) Translates to: AGKEGASERTEDQDISLYSHRLA*AMVLEL Trigger: CAGTTCAAGCACCATGGCTCAGGCCAAACGATGGCT...GTAAAGGCTTATGTCCTGATCCTCAGTTCTTTCTGAAGCCCCCTCCTTTCCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CCA 90 bp | GCAGGAAAGGAGGGGGCTTCAGAAAGAACTGAGGATCAGGACATAAGCCTTTACGTTTGGCCTGAGCCATaGTGCTTGAACTGCCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: AGKEGASERTEDQDISLYVWPEP*CLNCRL Trigger: AAGGCGGCAGTTCAAGCACCATGGCTCAGGCCAAAC...GTAAAGGCTTATGTCCTGATCCTCAGTTCTTTCTGAAGCCCCCTCCTTTCCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR TCA 90 bp | GCAGGAAAGGAGGGGGCTTCAGAAAGAACTGAGGATCAGGACATAAGCCTTTACGCAGTGCAAACTTGCTaGAGAGCTCGGTGCCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: AGKEGASERTEDQDISLYAVQTC*RARCQD Trigger: ATCTTGGCACCGAGCTCTTCAGCAAGTTTGCACTGC...GTAAAGGCTTATGTCCTGATCCTCAGTTCTTTCTGAAGCCCCCTCCTTTCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR GCA 90 bp | GCAGGAAAGGAGGGGGCTTCAGAAAGAACTGAGGATCAGGACATAAGCCTTTACGGCCTGCCTGTCTCATaGACCAAACGGGAGTATAGT | + |
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Preference number: 4 (lower is better) Translates to: AGKEGASERTEDQDISLYGLPVS*TKREYS Trigger: ACTATACTCCCGTTTGGTGCATGAGACAGGCAGGCC...GTAAAGGCTTATGTCCTGATCCTCAGTTCTTTCTGAAGCCCCCTCCTTTCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CCA 90 bp | GCAGGAAAGGAGGGGGCTTCAGAAAGAACTGAGGATCAGGACATAAGCCTTTACTCCATGCCCAATGCCTaGGGTACAACAAGGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: AGKEGASERTEDQDISLYSMPNA*GTTRMS Trigger: TGACATCCTTGTTGTACCCCAGGCATTGGGCATGGA...GTAAAGGCTTATGTCCTGATCCTCAGTTCTTTCTGAAGCCCCCTCCTTTCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR TCA 90 bp | AAGCCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTCTCCTGGAGATCGGCAGGTGCTaGAGAAGTCCTGGGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: KPLQKNMLDSNSGSFILLEIGRC*RSPGQP Trigger: GGGCTGCCCAGGACTTCTTCAGCACCTGCCGATCTC...CAGGAGAATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR GCA 90 bp | GCAGGTAGGTGGATCTTTGTGAGTTTGAGGTCGTGTGTGTGTGTGTGTGTGTGTACGAATGTAGGGCAGTaGAAACTTGCTGAAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: AGRWIFVSLRSCVCVCVCTNVGQ*KLAEEL Trigger: GAGCTCTTCAGCAAGTTTGCACTGCCCTACATTCGT...ACACACACACACACACACACACGACCTCAAACTCACAAAGATCCACCTACCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR GCA 90 bp | TCAGGACATAAGCCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTGCCAGGCCTGCCTTCTaGAACCCAGCCTTCACTCGC | + |
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Preference number: 4 (lower is better) Translates to: SGHKPLQKNMLDSNSGSFARPAF*NPAFTR Trigger: GCGAGTGAAGGCTGGGTTGCAGAAGGCAGGCCTGGC...AAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGGCTTATGTCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR GCA 90 bp | AAGCCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTCTCCTGCACTGGTGCCAGGCCTaGCTTCTGCAACCCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KPLQKNMLDSNSGSFILLHWCQA*LLQPSL Trigger: AAGGCTGGGTTGCAGAAGGCAGGCCTGGCACCAGTG...CAGGAGAATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR GCA 90 bp | CAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTCTCCTGGAAACAATCGATCATGGGCACTGGTaGCAGGCCTGCCTTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: QKNMLDSNSGSFILLETIDHGHW*QACLLQ Trigger: TTGCAGAAGGCAGGCCTGGCACCAGTGCCCATGATC...GATTGTTTCCAGGAGAATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CCA 90 bp | TCAGGACATAAGCCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTGCCCATGCCCTAGGTTaGCAATGTAGCGTTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SGHKPLQKNMLDSNSGSFAHALG*QCSVEA Trigger: GGCCTCAACGCTACATTGCCAACCTAGGGCATGGGC...AAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGGCTTATGTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR GCA 90 bp | AAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTCTCCTGGAAACAATCTCCTCAAAGAGCTGCAATaGCTGAGCACCAGCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KEHARLQLWKFYSPGNNLLKELQ*LSTSSH Trigger: GTGGCTGCTGGTGCTCAGGCATTGCAGCTCTTTGAG...GAGATTGTTTCCAGGAGAATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CCA 90 bp | CAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTCTCCTGGAAACAATCGGTAGAGCCATCGTTTaGCCTGAGCCATGGTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: QKNMLDSNSGSFILLETIGRAIV*PEPWCL Trigger: CAAGCACCATGGCTCAGGCCAAACGATGGCTCTACC...GATTGTTTCCAGGAGAATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR GCA 90 bp | GGACATAAGCCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTCCATGGTCACCTCCATaGCCAATGCCTGGGGTACAA | + |
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Preference number: 4 (lower is better) Translates to: GHKPLQKNMLDSNSGSFIPWSPP*PMPGVQ Trigger: TTGTACCCCAGGCATTGGGCATGGAGGTGACCATGG...AATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGGCTTATGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR GCA 90 bp | CAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTCTCCTGGAAACAATCGAAAGCTGGGTCCTTTaGCAGGTACCATGGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: QKNMLDSNSGSFILLETIESWVL*QVPWSP Trigger: AGGTGACCATGGTACCTGGCAAAGGACCCAGCTTTC...GATTGTTTCCAGGAGAATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR GCA 90 bp | GGACATAAGCCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTGGTGCCAAGATGTCCTaGGTGGGACTCAAAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GHKPLQKNMLDSNSGSFIGAKMS*VGLKEL Trigger: CAGCTCTTTGAGTCCCACGCAGGACATCTTGGCACC...AATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGGCTTATGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR GCA 90 bp | AAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTCTCCTGGAAACAATCTCTCATCCAGCATTTGCTaGACCAGCCGACCGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: KEHARLQLWKFYSPGNNLSSSIC*TSRPIS Trigger: AGAGATCGGTCGGCTGGTGCAGCAAATGCTGGATGA...GAGATTGTTTCCAGGAGAATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CCA 90 bp | CCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTCTCCTGGAACTTTGCCAGGTACCATaGTCACCTCCATGCCCAATG | + |
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Preference number: 4 (lower is better) Translates to: PLQKNMLDSNSGSFILLELCQVP*SPPCPM Trigger: CATTGGGCATGGAGGTGACCATGGTACCTGGCAAAG...TTCCAGGAGAATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CCA 90 bp | AAGCCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTCTCCTGCAGCCTTCACTCGCTTaGCCACATCACGAATGTAGG | + |
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Preference number: 4 (lower is better) Translates to: KPLQKNMLDSNSGSFILLQPSLA*PHHECR Trigger: CCTACATTCGTGATGTGGCCAAGCGAGTGAAGGCTG...CAGGAGAATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR TCA 90 bp | CCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTCTCCTGGAACTGTCGAAGCAGGCGTaGATGTTTGTGTACAGCATC | + |
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Preference number: 4 (lower is better) Translates to: PLQKNMLDSNSGSFILLELSKQA*MFVYSI Trigger: GATGCTGTACACAAACATTCACGCCTGCTTCGACAG...TTCCAGGAGAATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR GCA 90 bp | GGACATAAGCCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTTTCCTCTCCCCAGGCTaGTCTCAGGAACGTGTCATT | + |
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Preference number: 4 (lower is better) Translates to: GHKPLQKNMLDSNSGSFIFLSPG*SQERVI Trigger: AATGACACGTTCCTGAGAGCAGCCTGGGGAGAGGAA...AATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGGCTTATGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CCA 90 bp | GGACATAAGCCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTGGCTCCTACACGTTCTaGGTCCATGTCAGGGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: GHKPLQKNMLDSNSGSFIGSYTF*VHVRVK Trigger: CTTTACCCTGACATGGACCCAGAACGTGTAGGAGCC...AATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGGCTTATGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR GCA 90 bp | GGACATAAGCCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTCCATGGTGCTTGAACTaGCGCCTTCAACCATGTATG | + |
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Preference number: 4 (lower is better) Translates to: GHKPLQKNMLDSNSGSFIPWCLN*RLQPCM Trigger: CATACATGGTTGAAGGCGGCAGTTCAAGCACCATGG...AATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGGCTTATGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR GCA 90 bp | CAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTCTCCTGGAAACAATCGATCTCTTCCTCAGATaGATACAAGGCACAGGGATC | + |
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Preference number: 4 (lower is better) Translates to: QKNMLDSNSGSFILLETIDLFLR*IQGTGI Trigger: GATCCCTGTGCCTTGTATGCATCTGAGGAAGAGATC...GATTGTTTCCAGGAGAATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CCA 90 bp | TCAGGACATAAGCCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTTGTCAGAGAAAATTATaGCAGCATCCAGAGGAAACC | + |
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Preference number: 4 (lower is better) Translates to: SGHKPLQKNMLDSNSGSFCQRKL*QHPEET Trigger: GGTTTCCTCTGGATGCTGCCATAATTTTCTCTGACA...AAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGGCTTATGTCCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CCA 90 bp | CCCCTGCAGGGTCACTGCCTTCCCGACACGTTCCCGGGCTTTCTTTaGAGCCACTGTCCAGTCAAGTCCAACTACCTCATAGCCAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: PLQGHCLPDTFPGFL*SHCPVKSNYLIASL Trigger: CAGGCTGGCTATGAGGTAGTTGGACTTGACTGGACAGTGGCTCCAAAGAAAGCCCGGGAACGTGTCGGGAAGGCAGTGACCCTGCAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS GCA 90 bp | GTAGGGCAGTGCAAACTTGCTGAAGAGCTCGGTGCCAAGATGTCCTaGGTGGGACTCAAAGAGCTGCAATGCCGGAGCACCAGCAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: VGQCKLAEELGAKMS*VGLKELQCRSTSKA Trigger: GGCTTTGCTGGTGCTCCGGCATTGCAGCTCTTTGAGTCCCACGCAGGACATCTTGGCACCGAGCTCTTCAGCAAGTTTGCACTGCCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130273.8 |
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| CDS GCA 90 bp | CAACCCAGCCTTCACTCGCTTGGCCACATCACGAATGTAGGGCAGTaGAAACTTGCTGAAGAGCTCGGTGCCAAGATGTCCTGCGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: QPSLHSLGHITNVGQ*KLAEELGAKMSCVG Trigger: TCCCACGCAGGACATCTTGGCACCGAGCTCTTCAGCAAGTTTGCACTGCCCTACATTCGTGATGTGGCCAAGCGAGTGAAGGCTGGGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030446.15 ENSMUST00000130273.8 |
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| CDS GCA 90 bp | ATCTCTTCCTCAGATGCATACAAGGCACAGGGATCCAGGTTCCCCTaGAGGGTCACTGCCTTCCCGACACGTTCCCGGGCTTTCTTTGGA | + |
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Preference number: 5 (lower is better) Translates to: ISSSDAYKAQGSRFP*RVTAFPTRSRAFFG Trigger: TCCAAAGAAAGCCCGGGAACGTGTCGGGAAGGCAGTGACCCTGCAGGGGAACCTGGATCCCTGTGCCTTGTATGCATCTGAGGAAGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS GCA 90 bp | GCCTTTGGTAGAGCCATCGTTTGGCCTGAGCCATGGTGCTTGAACTaGCGCCTTCAACCATGTATGTCATTAGGGTCCACGGAGCACCAG | + |
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Preference number: 5 (lower is better) Translates to: AFGRAIVWPEPWCLN*RLQPCMSLGSTEHQ Trigger: CTGGTGCTCCGTGGACCCTAATGACATACATGGTTGAAGGCGGCAGTTCAAGCACCATGGCTCAGGCCAAACGATGGCTCTACCAAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS GCA 90 bp | TGGCCTGTGGCCTTTGGTAGAGCCATCGTTTGGCCTGAGCCATGGTaGTTGAACTGCCGCCTTCAACCATGTATGTCATTAGGGTCCACG | + |
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Preference number: 5 (lower is better) Translates to: WPVAFGRAIVWPEPW*LNCRLQPCMSLGST Trigger: CGTGGACCCTAATGACATACATGGTTGAAGGCGGCAGTTCAAGCACCATGGCTCAGGCCAAACGATGGCTCTACCAAAGGCCACAGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CCA 90 bp | GACTGGCCTGTGGCCTTTGGTAGAGCCATCGTTTGGCCTGAGCCATaGTGCTTGAACTGCCGCCTTCAACCATGTATGTCATTAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: DWPVAFGRAIVWPEP*CLNCRLQPCMSLGS Trigger: GGACCCTAATGACATACATGGTTGAAGGCGGCAGTTCAAGCACCATGGCTCAGGCCAAACGATGGCTCTACCAAAGGCCACAGGCCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CCA 90 bp | GGCAGTGCAAACTTGCTGAAGAGCTCGGTGCCAAGATGTCCTGCGTaGGACTCAAAGAGCTGCAATGCCGGAGCACCAGCAAAGCCAATT | + |
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Preference number: 5 (lower is better) Translates to: GSANLLKSSVPRCPA*DSKSCNAGAPAKPI Trigger: AATTGGCTTTGCTGGTGCTCCGGCATTGCAGCTCTTTGAGTCCCACGCAGGACATCTTGGCACCGAGCTCTTCAGCAAGTTTGCACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130273.8 |
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| CDS TCA 90 bp | TCACTCGCTTGGCCACATCACGAATGTAGGGCAGTGCAAACTTGCTaGAGAGCTCGGTGCCAAGATGTCCTGCGTGGGACTCAAAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: SLAWPHHECRAVQTC*RARCQDVLRGTQRA Trigger: AGCTCTTTGAGTCCCACGCAGGACATCTTGGCACCGAGCTCTTCAGCAAGTTTGCACTGCCCTACATTCGTGATGTGGCCAAGCGAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030446.15 ENSMUST00000130273.8 |
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| CDS GCA 90 bp | CTAAGTCCCGCTCTTCTCTTAATGGCTCTGGAAAGCTGGGTCCTTTaGCAGGTACCATGGTCACCTCCATGCCCAATGCCTGGGGTACAA | + |
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Preference number: 5 (lower is better) Translates to: LSPALLLMALESWVL*QVPWSPPCPMPGVQ Trigger: TTGTACCCCAGGCATTGGGCATGGAGGTGACCATGGTACCTGGCAAAGGACCCAGCTTTCCAGAGCCATTAAGAGAAGAGCGGGACTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CCA 90 bp | GTAGACGCTCTAAGTCCCGCTCTTCTCTTAATGGCTCTGGAAAGCTaGGTCCTTTGCCAGGTACCATGGTCACCTCCATGCCCAATGCCT | + |
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Preference number: 5 (lower is better) Translates to: VDALSPALLLMALES*VLCQVPWSPPCPMP Trigger: AGGCATTGGGCATGGAGGTGACCATGGTACCTGGCAAAGGACCCAGCTTTCCAGAGCCATTAAGAGAAGAGCGGGACTTAGAGCGTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CCA 90 bp | CTACACGTTCTGGGTCCATGTCAGGGTAAAGCCCATGCCCTAGGTTaGCAATGTAGCGTTGAGGCCCAAAGTCATCCAGCATTTGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: LHVLGPCQGKAHALG*QCSVEAQSHPAFAA Trigger: TGCAGCAAATGCTGGATGACTTTGGGCCTCAACGCTACATTGCCAACCTAGGGCATGGGCTTTACCCTGACATGGACCCAGAACGTGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CAA 90 bp | GCAGGTAGGTGGATCTTTGTGAGTTTGAGGTCGTGTGTGTGTGTGTGTGTGTGTCCTGAGCCATGGTGCTaGAACTGCCGCCTTCAACCA | + |
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Preference number: 5 (lower is better) Translates to: AGRWIFVSLRSCVCVCVCPEPWC*NCRLQP Trigger: TGGTTGAAGGCGGCAGTTCAAGCACCATGGCTCAGG...ACACACACACACACACACACACGACCTCAAACTCACAAAGATCCACCTACCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS GCA 90 bp | TCTCATGCACCAAACGGGAGTATAGTCTGTTTCCTCTCCCCAGGCTaGTCTCAGGAACGTGTCATTCTTCAGCTCCGGGAAATTCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SHAPNGSIVCFLSPG*SQERVILQLREILE Trigger: CTCCAGAATTTCCCGGAGCTGAAGAATGACACGTTCCTGAGAGCAGCCTGGGGAGAGGAAACAGACTATACTCCCGTTTGGTGCATGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CAA 90 bp | GCAGGAAAGGAGGGGGCTTCAGAAAGAACTGAGGATCAGGACATAAGCCTTTACGTTGGCAATGTAGCGTaGAGGCCCAAAGTCATCCAG | + |
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Preference number: 5 (lower is better) Translates to: AGKEGASERTEDQDISLYVGNVA*RPKVIQ Trigger: CTGGATGACTTTGGGCCTCAACGCTACATTGCCAAC...GTAAAGGCTTATGTCCTGATCCTCAGTTCTTTCTGAAGCCCCCTCCTTTCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CCA 90 bp | CCATGCCCAATGCCTGGGGTACAACAAGGATGTCAGAGAAAATTATaGCAGCATCCAGAGGAAACCTTCGTAGTGGCTGTAGAGTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: PCPMPGVQQGCQRKL*QHPEETFVVAVESV Trigger: AACTGACTCTACAGCCACTACGAAGGTTTCCTCTGGATGCTGCCATAATTTTCTCTGACATCCTTGTTGTACCCCAGGCATTGGGCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CAA 90 bp | CAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTCTCCTGGAAACAATCACGTCCGGCCAGCCGTaGTCGAGTAAGGGTGATGGC | + |
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Preference number: 5 (lower is better) Translates to: QKNMLDSNSGSFILLETITSGQP*SSKGDG Trigger: GCCATCACCCTTACTCGACAACGGCTGGCCGGACGT...GATTGTTTCCAGGAGAATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CAA 90 bp | GCAGGAAAGGAGGGGGCTTCAGAAAGAACTGAGGATCAGGACATAAGCCTTTACAGCAGGCGTGAATGTTaGTGTACAGCATCCACAAAG | + |
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Preference number: 5 (lower is better) Translates to: AGKEGASERTEDQDISLYSRREC*CTASTK Trigger: CTTTGTGGATGCTGTACACAAACATTCACGCCTGCT...GTAAAGGCTTATGTCCTGATCCTCAGTTCTTTCTGAAGCCCCCTCCTTTCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CAA 90 bp | TCAGGACATAAGCCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTGGAAAGCTGGGTCCTTaGCCAGGTACCATGGTCACC | + |
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Preference number: 5 (lower is better) Translates to: SGHKPLQKNMLDSNSGSFGKLGP*PGTMVT Trigger: GGTGACCATGGTACCTGGCAAAGGACCCAGCTTTCC...AAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGGCTTATGTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CAA 90 bp | AAGCCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTATTCTCCTGGTTCCCGGGCTTTCTTaGGAGCCACTGTCCAGTCAA | + |
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Preference number: 5 (lower is better) Translates to: KPLQKNMLDSNSGSFILLVPGLS*EPLSSQ Trigger: TTGACTGGACAGTGGCTCCAAAGAAAGCCCGGGAAC...CAGGAGAATAAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS-3UTR CAA 90 bp | TCAGGACATAAGCCTTTACAAAAGAACATGCTAGACTCCAACTCTGGAAGTTTTAAAGTCATCCAGCATTaGCTGCACCAGCCGACCGAT | + |
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Preference number: 5 (lower is better) Translates to: SGHKPLQKNMLDSNSGSFKVIQH*LHQPTD Trigger: ATCGGTCGGCTGGTGCAGCAAATGCTGGATGACTTT...AAAACTTCCAGAGTTGGAGTCTAGCATGTTCTTTTGTAAAGGCTTATGTCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CAA 90 bp | TCCCCTGCAGGGTCACTGCCTTCCCGACACGTTCCCGGGCTTTCTTaGGAGCCACTGTCCAGTCAAGTCCAACTACCTCATAGCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SPAGSLPSRHVPGLS*EPLSSQVQLPHSQP Trigger: AGGCTGGCTATGAGGTAGTTGGACTTGACTGGACAGTGGCTCCAAAGAAAGCCCGGGAACGTGTCGGGAAGGCAGTGACCCTGCAGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS GCA 72 bp | CATTTGCTGCACCAGCCGACCGATCTCTTCCTCAGATaGATACAAGGCACAGGGATCCAGGTTCCCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: HLLHQPTDLFLR*IQGTGIQVPLQ Trigger: CTGCAGGGGAACCTGGATCCCTGTGCCTTGTATGCATCTGAGGAAGAGATCGGTCGGCTGGTGCAGCAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS GCA 72 bp | TCGGTGCCAAGATGTCCTGCGTGGGACTCAAAGAGCTaGAATGCCGGAGCACCAGCAAAGCCAATTAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SVPRCPAWDSKS*NAGAPAKPISG Trigger: GCCACTAATTGGCTTTGCTGGTGCTCCGGCATTGCAGCTCTTTGAGTCCCACGCAGGACATCTTGGCACCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130273.8 |
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| CDS GCA 72 bp | TGCAAACTTGCTGAAGAGCTCGGTGCCAAGATGTCCTaGGTGGGACTCAAAGAGCTGCAATGCCGGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: CKLAEELGAKMS*VGLKELQCRST Trigger: GGTGCTCCGGCATTGCAGCTCTTTGAGTCCCACGCAGGACATCTTGGCACCGAGCTCTTCAGCAAGTTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130273.8 |
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| CDS CCA 72 bp | TGTGACTGGCCTGTGGCCTTTGGTAGAGCCATCGTTTaGCCTGAGCCATGGTGCTTGAACTGCCGCCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: CDWPVAFGRAIV*PEPWCLNCRLQ Trigger: TTGAAGGCGGCAGTTCAAGCACCATGGCTCAGGCCAAACGATGGCTCTACCAAAGGCCACAGGCCAGTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CCA 72 bp | AACTTGCTGAAGAGCTCGGTGCCAAGATGTCCTGCGTaGGACTCAAAGAGCTGCAATGCCGGAGCACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: NLLKSSVPRCPA*DSKSCNAGAPA Trigger: TGCTGGTGCTCCGGCATTGCAGCTCTTTGAGTCCCACGCAGGACATCTTGGCACCGAGCTCTTCAGCAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130273.8 |
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| CDS CAA 72 bp | GAGTATGCCAAGCAGCTTGTGACTGGCCTGTGGCCTTaGGTAGAGCCATCGTTTGGCCTGAGCCATGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: EYAKQLVTGLWP*VEPSFGLSHGA Trigger: AGCACCATGGCTCAGGCCAAACGATGGCTCTACCAAAGGCCACAGGCCAGTCACAAGCTGCTTGGCATACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CAA 72 bp | GGGTCACTGCCTTCCCGACACGTTCCCGGGCTTTCTTaGGAGCCACTGTCCAGTCAAGTCCAACTACCTCAT | + |
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Preference number: 6 (lower is better) Translates to: GSLPSRHVPGLS*EPLSSQVQLPH Trigger: ATGAGGTAGTTGGACTTGACTGGACAGTGGCTCCAAAGAAAGCCCGGGAACGTGTCGGGAAGGCAGTGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CAA 90 bp | CCTGTGGCCTTTGGTAGAGCCATCGTTTGGCCTGAGCCATGGTGCTaGAACTGCCGCCTTCAACCATGTATGTCATTAGGGTCCACGGAG | + |
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Preference number: 6 (lower is better) Translates to: PVAFGRAIVWPEPWC*NCRLQPCMSLGSTE Trigger: CTCCGTGGACCCTAATGACATACATGGTTGAAGGCGGCAGTTCAAGCACCATGGCTCAGGCCAAACGATGGCTCTACCAAAGGCCACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS TCA 72 bp | TGGCCACATCACGAATGTAGGGCAGTGCAAACTTGCTaGAGAGCTCGGTGCCAAGATGTCCTGCGTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: WPHHECRAVQTC*RARCQDVLRGT Trigger: AGTCCCACGCAGGACATCTTGGCACCGAGCTCTTCAGCAAGTTTGCACTGCCCTACATTCGTGATGTGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030446.15 ENSMUST00000130273.8 |
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| CDS GCA 72 bp | TGCAAACTTGCTGAAGAGCTCGGTGCCAAGATGTCCTaGGTGGGACTCAAAGAGCTGCAATGCCTGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: CKLAEELGAKMS*VGLKELQCLST Trigger: GGTGCTCAGGCATTGCAGCTCTTTGAGTCCCACGCAGGACATCTTGGCACCGAGCTCTTCAGCAAGTTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CCA 72 bp | GGTCACTGCCTTCCCGACACGTTCCCGGGCTTTCTTTaGAGCCACTGTCCAGTCAAGTCCAACTACCTCATA | + |
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Preference number: 6 (lower is better) Translates to: GHCLPDTFPGFL*SHCPVKSNYLI Trigger: TATGAGGTAGTTGGACTTGACTGGACAGTGGCTCCAAAGAAAGCCCGGGAACGTGTCGGGAAGGCAGTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CAA 72 bp | CGCTCTTCTCTTAATGGCTCTGGAAAGCTGGGTCCTTaGCCAGGTACCATGGTCACCTCCATGCCCAATGCC | + |
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Preference number: 6 (lower is better) Translates to: RSSLNGSGKLGP*PGTMVTSMPNA Trigger: GGCATTGGGCATGGAGGTGACCATGGTACCTGGCAAAGGACCCAGCTTTCCAGAGCCATTAAGAGAAGAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CAA 72 bp | GGCAATGTAGCGTTGAGGCCCAAAGTCATCCAGCATTaGCTGCACCAGCCGACCGATCTCTTCCTCAGATGC | + |
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Preference number: 6 (lower is better) Translates to: GNVALRPKVIQH*LHQPTDLFLRC Trigger: GCATCTGAGGAAGAGATCGGTCGGCTGGTGCAGCAAATGCTGGATGACTTTGGGCCTCAACGCTACATTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CAA 90 bp | TCTAAGTCCCGCTCTTCTCTTAATGGCTCTGGAAAGCTGGGTCCTTaGCCAGGTACCATGGTCACCTCCATGCCCAATGCCTGGGGTACA | + |
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Preference number: 6 (lower is better) Translates to: SKSRSSLNGSGKLGP*PGTMVTSMPNAWGT Trigger: TGTACCCCAGGCATTGGGCATGGAGGTGACCATGGTACCTGGCAAAGGACCCAGCTTTCCAGAGCCATTAAGAGAAGAGCGGGACTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS GCA 72 bp | CCAAACGGGAGTATAGTCTGTTTCCTCTCCCCAGGCTaGTCTCAGGAACGTGTCATTCTTCAGCTCCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: PNGSIVCFLSPG*SQERVILQLRE Trigger: TTCCCGGAGCTGAAGAATGACACGTTCCTGAGAGCAGCCTGGGGAGAGGAAACAGACTATACTCCCGTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS GCA 72 bp | GCTCTTCTCTTAATGGCTCTGGAAAGCTGGGTCCTTTaGCAGGTACCATGGTCACCTCCATGCCCAATGCCT | + |
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Preference number: 6 (lower is better) Translates to: ALLLMALESWVL*QVPWSPPCPMP Trigger: AGGCATTGGGCATGGAGGTGACCATGGTACCTGGCAAAGGACCCAGCTTTCCAGAGCCATTAAGAGAAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS GCA 72 bp | AGAGCCATCGTTTGGCCTGAGCCATGGTGCTTGAACTaGCGCCTTCAACCATGTATGTCATTAGGGTCCACG | + |
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Preference number: 6 (lower is better) Translates to: RAIVWPEPWCLN*RLQPCMSLGST Trigger: CGTGGACCCTAATGACATACATGGTTGAAGGCGGCAGTTCAAGCACCATGGCTCAGGCCAAACGATGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS GCA 72 bp | CTTCACTCGCTTGGCCACATCACGAATGTAGGGCAGTaGAAACTTGCTGAAGAGCTCGGTGCCAAGATGTCC | + |
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Preference number: 6 (lower is better) Translates to: LHSLGHITNVGQ*KLAEELGAKMS Trigger: GGACATCTTGGCACCGAGCTCTTCAGCAAGTTTGCACTGCCCTACATTCGTGATGTGGCCAAGCGAGTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030446.15 ENSMUST00000130273.8 |
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| CDS CCA 72 bp | GTGGCCTTTGGTAGAGCCATCGTTTGGCCTGAGCCATaGTGCTTGAACTGCCGCCTTCAACCATGTATGTCA | + |
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Preference number: 6 (lower is better) Translates to: VAFGRAIVWPEP*CLNCRLQPCMS Trigger: TGACATACATGGTTGAAGGCGGCAGTTCAAGCACCATGGCTCAGGCCAAACGATGGCTCTACCAAAGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CCA 72 bp | ATCAGTGAGTATGCCAAGCAGCTTGTGACTGGCCTGTaGCCTTTGGTAGAGCCATCGTTTGGCCTGAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: ISEYAKQLVTGL*PLVEPSFGLSH Trigger: ATGGCTCAGGCCAAACGATGGCTCTACCAAAGGCCACAGGCCAGTCACAAGCTGCTTGGCATACTCACTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS GCA 72 bp | GCCTTTGGTAGAGCCATCGTTTGGCCTGAGCCATGGTaGTTGAACTGCCGCCTTCAACCATGTATGTCATTA | + |
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Preference number: 6 (lower is better) Translates to: AFGRAIVWPEPW*LNCRLQPCMSL Trigger: TAATGACATACATGGTTGAAGGCGGCAGTTCAAGCACCATGGCTCAGGCCAAACGATGGCTCTACCAAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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| CDS CAA 72 bp | TTTGGTAGAGCCATCGTTTGGCCTGAGCCATGGTGCTaGAACTGCCGCCTTCAACCATGTATGTCATTAGGG | + |
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Preference number: 6 (lower is better) Translates to: FGRAIVWPEPWC*NCRLQPCMSLG Trigger: CCCTAATGACATACATGGTTGAAGGCGGCAGTTCAAGCACCATGGCTCAGGCCAAACGATGGCTCTACCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030446.15 |
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