Pregenerated sensors for UROC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034456Ensembl transcript IDs: ENSMUST00000046128.12, ENSMUST00000164761.6
Found 291 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TACTCCTCAGCACCAAGGACTTGGTGTGAGCACTTTGTGAACCCATaGGAGAATGCCAGGTTCTCTGAGGAACCGGAAGTGATGGATGAC | + |
Preference number: 1 (lower is better) Translates to: YSSAPRTWCEHFVNP*ENARFSEEPEVMDD Trigger: GTCATCCATCACTTCCGGTTCCTCAGAGAACCTGGCATTCTCTCATGGGTTCACAAAGTGCTCACACCAAGTCCTTGGTGCTGAGGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR GCA 90 bp | CCAAGCGTCTCTTCTTTCTTCCTGGCTCATAGTGTAATTTTGCTCTaGCATGTGCTCCCTGCCATTGCCACTTGGCATTGTTGCCAGAGG | + |
Preference number: 1 (lower is better) Translates to: PSVSSFFLAHSVILL*HVLPAIATWHCCQR Trigger: CCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACATGGCAGAGCAAAATTACACTATGAGCCAGGAAGAAAGAAGAGACGCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR TCA 90 bp | GATAGGAGACTGAACAGCACATTTAGAAGGTCACAGAGAATCTTGTaGGGCGGGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATC | + |
Preference number: 1 (lower is better) Translates to: DRRLNSTFRRSQRIL*GGCQLGQHSRFLPI Trigger: GATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACCCGCCTCACAAGATTCTCTGTGACCTTCTAAATGTGCTGTTCAGTCTCCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR CCA 90 bp | CATAGTGTAATTTTGCTCTGCCATGTGCTCCCTGCCATTGCCACTTaGCATTGTTGCCAGAGGCCCAAAGCAACACGACTTCCTTATCTT | + |
Preference number: 1 (lower is better) Translates to: HSVILLCHVLPAIAT*HCCQRPKATRLPYL Trigger: AAGATAAGGAAGTCGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACATGGCAGAGCAAAATTACACTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR GCA 90 bp | TGCAAGAAACATAGACCAAAATGCCAGAAAGCCGATTTTGACCTCTaGTATGGCTGCAGATGGGCTAAAGGCTTATTCCAAAGCTGTGCA | + |
Preference number: 1 (lower is better) Translates to: CKKHRPKCQKADFDL*YGCRWAKGLFQSCA Trigger: TGCACAGCTTTGGAATAAGCCTTTAGCCCATCTGCAGCCATAGCAGAGGTCAAAATCGGCTTTCTGGCATTTTGGTCTATGTTTCTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR CCA 90 bp | AGACTCTGTTATCCACTCTTGCTAGCCCAGTCTGTGCCATGTGTTTaGCTCTACTCTAGTCTTTATTTCCTGTCTATCTTCCCCCATACT | + |
Preference number: 1 (lower is better) Translates to: RLCYPLLLAQSVPCV*LYSSLYFLSIFPHT Trigger: AGTATGGGGGAAGATAGACAGGAAATAAAGACTAGAGTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR TCA 90 bp | TGTGCTCCCTGCCATTGCCACTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGGGTGGGGGAGGGTCATaGGCTGCGAGGGGAGGGCAG | + |
Preference number: 2 (lower is better) Translates to: CAPCHCHLALLPEAQSNTGGGGS*AARGGQ Trigger: CTGCCCTCCCCTCGCAGCTCATGACCCTCCCCCACC...CGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR TCA 90 bp | GGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTGGTGGGGGAGGGTCATaGGCTGCGAGGGGAGGGCAG | + |
Preference number: 2 (lower is better) Translates to: GASLASIQGSFLSKLESTGGGGS*AARGGQ Trigger: CTGCCCTCCCCTCGCAGCTCATGACCCTCCCCCACC...AGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CCA 90 bp | TGTGCTCCCTGCCATTGCCACTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGGCGAGGGGAGGGCAGTaGGAAGGAGGGGATCAAGAG | + |
Preference number: 2 (lower is better) Translates to: CAPCHCHLALLPEAQSNTARGGQ*EGGDQE Trigger: CTCTTGATCCCCTCCTTCCCACTGCCCTCCCCTCGC...CGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CCA 90 bp | CTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGACTTCCTTATCTTGCGTGGGAGGGATGCAGTGGGGTaGGGGAGGGTCATGAGCTGC | + |
Preference number: 2 (lower is better) Translates to: LGIVARGPKQHDFLILRGRDAVG*GRVMSC Trigger: GCAGCTCATGACCCTCCCCCACCCCACTGCATCCCT...CCCACGCAAGATAAGGAAGTCGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR GCA 90 bp | CTCTGTTATCCACTCTTGCTAGCCCAGTCTGTGCCATGTGTTTGGCTCTACTCTGGGAGGGTCATGAGCTaGGAGGGGAGGGCAGTGGGA | + |
Preference number: 2 (lower is better) Translates to: LCYPLLLAQSVPCVWLYSGRVMS*EGRAVG Trigger: TCCCACTGCCCTCCCCTCGCAGCTCATGACCCTCCC...AGAGTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR GCA 90 bp | GCTCATAGTGTAATTTTGCTCTGCCATGTGCTCCCTGCCATTGCCACTTGGCATGGGAGGGTCATGAGCTaGGAGGGGAGGGCAGTGGGA | + |
Preference number: 2 (lower is better) Translates to: AHSVILLCHVLPAIATWHGRVMS*EGRAVG Trigger: TCCCACTGCCCTCCCCTCGCAGCTCATGACCCTCCC...ATGCCAAGTGGCAATGGCAGGGAGCACATGGCAGAGCAAAATTACACTATGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CCA 90 bp | GCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGGCGAGGGGAGGGCAGTaGGAAGGAGGGGATCAAGAG | + |
Preference number: 2 (lower is better) Translates to: ASIQGSFLSKLESTLTGLARGGQ*EGGDQE Trigger: CTCTTGATCCCCTCCTTCCCACTGCCCTCCCCTCGC...CAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CCA 90 bp | GCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGAGGGATGCAGTGGGGTaGGGGAGGGTCATGAGCTGC | + |
Preference number: 2 (lower is better) Translates to: ASIQGSFLSKLESTLTGLRDAVG*GRVMSC Trigger: GCAGCTCATGACCCTCCCCCACCCCACTGCATCCCT...CAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR TCA 90 bp | TGTGCTCCCTGCCATTGCCACTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGTGGCCTGGTGAAGATTaGAAAGAGGGCACAGGACAT | + |
Preference number: 2 (lower is better) Translates to: CAPCHCHLALLPEAQSNTWPGED*KEGTGH Trigger: ATGTCCTGTGCCCTCTTTTCAATCTTCACCAGGCCA...CGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CCA 90 bp | CTCTGCTATGGCTGCAGATGGGCTAAAGGCTTATTCCAAAGCTGTGCAGGGAGGCCACCCAGGGACCTCTaGAAGTGGTTGGTTCTGTTT | + |
Preference number: 2 (lower is better) Translates to: LCYGCRWAKGLFQSCAGRPPRDL*KWLVLF Trigger: AAACAGAACCAACCACTTCCAGAGGTCCCTGGGTGG...CCTCCCTGCACAGCTTTGGAATAAGCCTTTAGCCCATCTGCAGCCATAGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR CAA 90 bp | CAGCAGCACCTGGCCACTTTGCCTCAGAGACTCTGTTATCCACTCTaGCTAGCCCAGTCTGTGCCATGTGTTTGGCTCTACTCTAGTCTT | + |
Preference number: 2 (lower is better) Translates to: QQHLATLPQRLCYPL*LAQSVPCVWLYSSL Trigger: AAGACTAGAGTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAGTCTCTGAGGCAAAGTGGCCAGGTGCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR TCA 90 bp | CTCTGCTATGGCTGCAGATGGGCTAAAGGCTTATTCCAAAGCTGTGCAGGGAGGGGTGTGAGCACTTTGTaGACCCATGAGAGAATGCCA | + |
Preference number: 2 (lower is better) Translates to: LCYGCRWAKGLFQSCAGRGVSTL*THERMP Trigger: TGGCATTCTCTCATGGGTTCACAAAGTGCTCACACC...CCTCCCTGCACAGCTTTGGAATAAGCCTTTAGCCCATCTGCAGCCATAGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR TCA 90 bp | AGGCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGAGATCTGGCCTGGTaGAGATTGAAAAGAGGGCAC | + |
Preference number: 2 (lower is better) Translates to: RLIPKLCREVRGPLEVELGDLAW*RLKRGH Trigger: GTGCCCTCTTTTCAATCTTCACCAGGCCAGATCTCC...TAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR GCA 90 bp | AGGCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGCCACTTGGCATTGTTaGCAGAGGCCCAAAGCAACA | + |
Preference number: 2 (lower is better) Translates to: RLIPKLCREVRGPLEVELATWHC*QRPKAT Trigger: TGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGC...TAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CCA 90 bp | AGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTTGGGTCCAACTGCCCTCAAACCAGTaGTCAAAGACTAGCGCCTTC | + |
Preference number: 2 (lower is better) Translates to: RALGYWNTPLKDWRTWVQLPSNQ*SKTSAF Trigger: GAAGGCGCTAGTCTTTGACCACTGGTTTGAGGGCAG...TTGGACCCAAGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CCA 90 bp | AGGCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTACCACCCAGGGACCTCTaGAAGTGGTTGGTTCTGTTT | + |
Preference number: 2 (lower is better) Translates to: RLIPKLCREVRGPLEVELPPRDL*KWLVLF Trigger: AAACAGAACCAACCACTTCCAGAGGTCCCTGGGTGG...TAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CCA 90 bp | AGGCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAACACCCTTGAAGGATTaGAGGACTTGGGTCCAAGCG | + |
Preference number: 2 (lower is better) Translates to: RLIPKLCREVRGPLEVELTPLKD*RTWVQA Trigger: CGCTTGGACCCAAGTCCTCCAATCCTTCAAGGGTGT...TAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR TCA 90 bp | GCTCATAGTGTAATTTTGCTCTGCCATGTGCTCCCTGCCATTGCCACTTGGCATGGAGATCTGGCCTGGTaGAGATTGAAAAGAGGGCAC | + |
Preference number: 2 (lower is better) Translates to: AHSVILLCHVLPAIATWHGDLAW*RLKRGH Trigger: GTGCCCTCTTTTCAATCTTCACCAGGCCAGATCTCC...ATGCCAAGTGGCAATGGCAGGGAGCACATGGCAGAGCAAAATTACACTATGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CCA 90 bp | GCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGTCAGCACCAAGGACTTaGTGTGAGCACTTTGTGAAC | + |
Preference number: 2 (lower is better) Translates to: AYSKAVQGGEGTFRSGARSAPRT*CEHFVN Trigger: GTTCACAAAGTGCTCACACCAAGTCCTTGGTGCTGA...CCTAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR CAA 90 bp | AGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATaGCCTTTTCTCCACATGTTGCAGCAGCACCTGGCCACTTTGCCT | + |
Preference number: 2 (lower is better) Translates to: RDLWKWLVLFFMVTQ*PFLHMLQQHLATLP Trigger: AGGCAAAGTGGCCAGGTGCTGCTGCAACATGTGGAGAAAAGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR CAA 90 bp | TTGGGTCCAAGCGTCTCTTCTTTCTTCCTGGCTCATAGTGTAATTTaGCTCTGCCATGTGCTCCCTGCCATTGCCACTTGGCATTGTTGC | + |
Preference number: 2 (lower is better) Translates to: LGPSVSSFFLAHSVI*LCHVLPAIATWHCC Trigger: GCAACAATGCCAAGTGGCAATGGCAGGGAGCACATGGCAGAGCAAAATTACACTATGAGCCAGGAAGAAAGAAGAGACGCTTGGACCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR TCA 90 bp | GCTAGGGAAAGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTCACTTTGTGAACCCATaGGAGAATGCCAGGTTCTCT | + |
Preference number: 2 (lower is better) Translates to: ARERALGYWNTPLKDWRTHFVNP*ENARFS Trigger: AGAGAACCTGGCATTCTCTCATGGGTTCACAAAGTG...AGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCTTTCCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR GCA 90 bp | GCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGCTTCAGAGGTTGGATTaGAGGCCATGGGAAAGATAT | + |
Preference number: 2 (lower is better) Translates to: AYSKAVQGGEGTFRSGARLQRLD*RPWERY Trigger: ATATCTTTCCCATGGCCTGCAATCCAACCTCTGAAG...CCTAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR TCA 90 bp | CTCTGTTATCCACTCTTGCTAGCCCAGTCTGTGCCATGTGTTTGGCTCTACTCTCACTTTGTGAACCCATaGGAGAATGCCAGGTTCTCT | + |
Preference number: 2 (lower is better) Translates to: LCYPLLLAQSVPCVWLYSHFVNP*ENARFS Trigger: AGAGAACCTGGCATTCTCTCATGGGTTCACAAAGTG...AGAGTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR GCA 90 bp | AGGCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTACTTCAGAGGTTGGATTaGAGGCCATGGGAAAGATAT | + |
Preference number: 2 (lower is better) Translates to: RLIPKLCREVRGPLEVELLQRLD*RPWERY Trigger: ATATCTTTCCCATGGCCTGCAATCCAACCTCTGAAG...TAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR GCA 90 bp | AGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTTGGGTCCAAAGTGTAATTTTGCTCTaGCATGTGCTCCCTGCCATT | + |
Preference number: 2 (lower is better) Translates to: RALGYWNTPLKDWRTWVQSVILL*HVLPAI Trigger: AATGGCAGGGAGCACATGGCAGAGCAAAATTACACT...TTGGACCCAAGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR GCA 90 bp | AGGCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTATCATGGTCACACAATTaGCTTTTCTCCACATGTTGC | + |
Preference number: 2 (lower is better) Translates to: RLIPKLCREVRGPLEVELSWSHN*LFSTCC Trigger: GCAACATGTGGAGAAAAGGCAATTGTGTGACCATGA...TAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CCA 90 bp | CTCTGCTATGGCTGCAGATGGGCTAAAGGCTTATTCCAAAGCTGTGCAGGGAGGTCTGTGCCATGTGTTTaGCTCTACTCTAGTCTTTAT | + |
Preference number: 2 (lower is better) Translates to: LCYGCRWAKGLFQSCAGRSVPCV*LYSSLY Trigger: ATAAAGACTAGAGTAGAGCCAAACACATGGCACAGA...CCTCCCTGCACAGCTTTGGAATAAGCCTTTAGCCCATCTGCAGCCATAGCAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CCA 90 bp | CTCTGCTATGGCTGCAGATGGGCTAAAGGCTTATTCCAAAGCTGTGCAGGGAGGCTAAAAGATGGGTATTaGGGGTTAGGAGGCATTATA | + |
Preference number: 2 (lower is better) Translates to: LCYGCRWAKGLFQSCAGRLKDGY*GLGGII Trigger: TATAATGCCTCCTAACCCCCAATACCCATCTTTTAG...CCTCCCTGCACAGCTTTGGAATAAGCCTTTAGCCCATCTGCAGCCATAGCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CCA 90 bp | AGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTTGGGTCCAATCTGTGCCATGTGTTTaGCTCTACTCTAGTCTTTAT | + |
Preference number: 2 (lower is better) Translates to: RALGYWNTPLKDWRTWVQSVPCV*LYSSLY Trigger: ATAAAGACTAGAGTAGAGCCAAACACATGGCACAGA...TTGGACCCAAGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CAA 90 bp | TGTGCTCCCTGCCATTGCCACTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGCTCTGTTATCCACTCTaGCTAGCCCAGTCTGTGCCA | + |
Preference number: 3 (lower is better) Translates to: CAPCHCHLALLPEAQSNTLCYPL*LAQSVP Trigger: TGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAG...CGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR TCA 72 bp | GGGATCACACAGCAGGAGATCTGGCCTGGTGAAGATTaGAAAGAGGGCACAGGACATGGTAGTGGGAAGGGG | + |
Preference number: 3 (lower is better) Translates to: GITQQEIWPGED*KEGTGHGSGKG Trigger: CCCCTTCCCACTACCATGTCCTGTGCCCTCTTTTCAATCTTCACCAGGCCAGATCTCCTGCTGTGTGATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CAA 90 bp | CTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGACTTCCTTATCTTGCGTGGGCAGCACCTGGCCACTTaGCCTCAGAGACTCTGTTAT | + |
Preference number: 3 (lower is better) Translates to: LGIVARGPKQHDFLILRGQHLAT*PQRLCY Trigger: ATAACAGAGTCTCTGAGGCAAAGTGGCCAGGTGCTG...CCCACGCAAGATAAGGAAGTCGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CAA 90 bp | AGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTTGGGTCCAATGCCACTTGGCATTGTaGCCAGAGGCCCAAAGCAAC | + |
Preference number: 3 (lower is better) Translates to: RALGYWNTPLKDWRTWVQCHLAL*PEAQSN Trigger: GTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCA...TTGGACCCAAGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR TCA 72 bp | GCACCAAGGACTTGGTGTGAGCACTTTGTGAACCCATaGGAGAATGCCAGGTTCTCTGAGGAACCGGAAGTG | + |
Preference number: 3 (lower is better) Translates to: APRTWCEHFVNP*ENARFSEEPEV Trigger: CACTTCCGGTTCCTCAGAGAACCTGGCATTCTCTCATGGGTTCACAAAGTGCTCACACCAAGTCCTTGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR-3UTR CAA 90 bp | CTCTGCTATGGCTGCAGATGGGCTAAAGGCTTATTCCAAAGCTGTGCAGGGAGGAGCTACCCAACTTTCTaGCTAGGTCTCCTGCTTCAG | + |
Preference number: 3 (lower is better) Translates to: LCYGCRWAKGLFQSCAGRSYPTF*LGLLLQ Trigger: CTGAAGCAGGAGACCTAGCAAGAAAGTTGGGTAGCT...CCTCCCTGCACAGCTTTGGAATAAGCCTTTAGCCCATCTGCAGCCATAGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR TCA 72 bp | CTGAACAGCACATTTAGAAGGTCACAGAGAATCTTGTaGGGCGGGTGCCAGCTTGGCCAGCATTCAAGGTTC | + |
Preference number: 3 (lower is better) Translates to: LNSTFRRSQRIL*GGCQLGQHSRF Trigger: GAACCTTGAATGCTGGCCAAGCTGGCACCCGCCTCACAAGATTCTCTGTGACCTTCTAAATGTGCTGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR TCA 72 bp | ACTCCTCAGCACCAAGGACTTGGTGTGAGCACTTTGTaGACCCATGAGAGAATGCCAGGTTCTCTGAGGAAC | + |
Preference number: 3 (lower is better) Translates to: TPQHQGLGVSTL*THERMPGSLRN Trigger: GTTCCTCAGAGAACCTGGCATTCTCTCATGGGTTCACAAAGTGCTCACACCAAGTCCTTGGTGCTGAGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR TCA 72 bp | TCTTCCCCCATACTCCTCAGCACCAAGGACTTGGTGTaGGCACTTTGTGAACCCATGAGAGAATGCCAGGTT | + |
Preference number: 3 (lower is better) Translates to: SSPILLSTKDLV*ALCEPMRECQV Trigger: AACCTGGCATTCTCTCATGGGTTCACAAAGTGCTCACACCAAGTCCTTGGTGCTGAGGAGTATGGGGGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR CCA 72 bp | GGCTACTGGAACACACCCTTGAAGGATTGGAGGACTTaGGTCCAAGCGTCTCTTCTTTCTTCCTGGCTCATA | + |
Preference number: 3 (lower is better) Translates to: GYWNTPLKDWRT*VQASLLSSWLI Trigger: TATGAGCCAGGAAGAAAGAAGAGACGCTTGGACCCAAGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
3UTR CCA 72 bp | CACAATTGCCTTTTCTCCACATGTTGCAGCAGCACCTaGCCACTTTGCCTCAGAGACTCTGTTATCCACTCT | + |
Preference number: 3 (lower is better) Translates to: HNCLFSTCCSST*PLCLRDSVIHS Trigger: AGAGTGGATAACAGAGTCTCTGAGGCAAAGTGGCCAGGTGCTGCTGCAACATGTGGAGAAAAGGCAATTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
3UTR CCA 72 bp | TGCAGGATTCCAGATCCACCCAGGGACCTCTGGAAGTaGTTGGTTCTGTTTTTCATGGTCACACAATTGCCT | + |
Preference number: 3 (lower is better) Translates to: CRIPDPPRDLWK*LVLFFMVTQLP Trigger: AGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCTGGGTGGATCTGGAATCCTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
3UTR CCA 72 bp | AACTCCTGCAGGATTCCAGATCCACCCAGGGACCTCTaGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAA | + |
Preference number: 3 (lower is better) Translates to: NSCRIPDPPRDL*KWLVLFFMVTQ Trigger: TTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCTGGGTGGATCTGGAATCCTGCAGGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
3UTR CCA 72 bp | TTTAGAAGTGGAGCTAGGGAAAGGGCTTTAGGCTACTaGAACACACCCTTGAAGGATTGGAGGACTTGGGTC | + |
Preference number: 3 (lower is better) Translates to: FRSGARERALGY*NTPLKDWRTWV Trigger: GACCCAAGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCTTTCCCTAGCTCCACTTCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
3UTR-3UTR CAA 90 bp | GCTCATAGTGTAATTTTGCTCTGCCATGTGCTCCCTGCCATTGCCACTTGGCATGACCTCTGGAAGTGGTaGGTTCTGTTTTTCATGGTC | + |
Preference number: 3 (lower is better) Translates to: AHSVILLCHVLPAIATWHDLWKW*VLFFMV Trigger: GACCATGAAAAACAGAACCAACCACTTCCAGAGGTC...ATGCCAAGTGGCAATGGCAGGGAGCACATGGCAGAGCAAAATTACACTATGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
3UTR-3UTR CAA 90 bp | AGGCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTACCTAAAAGATGGGTATaGGGGGTTAGGAGGCATTAT | + |
Preference number: 3 (lower is better) Translates to: RLIPKLCREVRGPLEVELPKRWV*GVRRHY Trigger: ATAATGCCTCCTAACCCCCAATACCCATCTTTTAGG...TAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
3UTR-3UTR CAA 90 bp | AGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTTGGGTCCAATTCATGGTCACACAATaGCCTTTTCTCCACATGTTG | + |
Preference number: 3 (lower is better) Translates to: RALGYWNTPLKDWRTWVQFMVTQ*PFLHML Trigger: CAACATGTGGAGAAAAGGCAATTGTGTGACCATGAA...TTGGACCCAAGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
3UTR GCA 72 bp | TCTTCTTTCTTCCTGGCTCATAGTGTAATTTTGCTCTaGCATGTGCTCCCTGCCATTGCCACTTGGCATTGT | + |
Preference number: 3 (lower is better) Translates to: SSFFLAHSVILL*HVLPAIATWHC Trigger: ACAATGCCAAGTGGCAATGGCAGGGAGCACATGGCAGAGCAAAATTACACTATGAGCCAGGAAGAAAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
3UTR GCA 72 bp | AAATGCCAGAAAGCCGATTTTGACCTCTGCTATGGCTaGAGATGGGCTAAAGGCTTATTCCAAAGCTGTGCA | + |
Preference number: 3 (lower is better) Translates to: KCQKADFDLCYG*RWAKGLFQSCA Trigger: TGCACAGCTTTGGAATAAGCCTTTAGCCCATCTGCAGCCATAGCAGAGGTCAAAATCGGCTTTCTGGCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
3UTR GCA 72 bp | ACTTTCTTGCTAGGTCTCCTGCTTCAGAGGTTGGATTaGAGGCCATGGGAAAGATATAAGAACCCAGCTTAT | + |
Preference number: 3 (lower is better) Translates to: TFLLGLLLQRLD*RPWERYKNPAY Trigger: ATAAGCTGGGTTCTTATATCTTTCCCATGGCCTGCAATCCAACCTCTGAAGCAGGAGACCTAGCAAGAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
3UTR GCA 72 bp | CATAGACCAAAATGCCAGAAAGCCGATTTTGACCTCTaGTATGGCTGCAGATGGGCTAAAGGCTTATTCCAA | + |
Preference number: 3 (lower is better) Translates to: HRPKCQKADFDL*YGCRWAKGLFQ Trigger: TTGGAATAAGCCTTTAGCCCATCTGCAGCCATAGCAGAGGTCAAAATCGGCTTTCTGGCATTTTGGTCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
3UTR CCA 72 bp | TATCCACTCTTGCTAGCCCAGTCTGTGCCATGTGTTTaGCTCTACTCTAGTCTTTATTTCCTGTCTATCTTC | + |
Preference number: 3 (lower is better) Translates to: YPLLLAQSVPCV*LYSSLYFLSIF Trigger: GAAGATAGACAGGAAATAAAGACTAGAGTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR TCA 90 bp | TGTGCTCCCTGCCATTGCCACTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGGAGCCCACCACCAGCTaGTGCTTGGCAGCCTCTCGG | + |
Preference number: 4 (lower is better) Translates to: CAPCHCHLALLPEAQSNTEPTTS*CLAASR Trigger: CCGAGAGGCTGCCAAGCATCAGCTGGTGGTGGGCTC...CGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR TCA 90 bp | GGCGGGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCGGGCCTCTGAGAAGCTaGGCTGCACAGGGTAGTAGC | + |
Preference number: 4 (lower is better) Translates to: GGCQLGQHSRFLPIQAGVGPLRS*AAQGSS Trigger: GCTACTACCCTGTGCAGCTCAGCTTCTCAGAGGCCC...GACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACCCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR TCA 90 bp | GGCGGGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCCTTGGGCCAACCTGTTaGTGGCTGCGACATGCCTCC | + |
Preference number: 4 (lower is better) Translates to: GGCQLGQHSRFLPIQAGVLGPTC*WLRHAS Trigger: GGAGGCATGTCGCAGCCATCAACAGGTTGGCCCAAG...GACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACCCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR TCA 90 bp | CTCTGCTATGGCTGCAGATGGGCTAAAGGCTTATTCCAAAGCTGTGCAGGGAGGGCTGCTGCCTTGGCTTaGGCCCCACTCATCCCGCCA | + |
Preference number: 4 (lower is better) Translates to: LCYGCRWAKGLFQSCAGRAAALA*APLIPP Trigger: TGGCGGGATGAGTGGGGCTCAAGCCAAGGCAGCAGC...CCTCCCTGCACAGCTTTGGAATAAGCCTTTAGCCCATCTGCAGCCATAGCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | TGTGCTCCCTGCCATTGCCACTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGGGGCCTCTGAGAAGCTaGGCTGCACAGGGTAGTAGC | + |
Preference number: 4 (lower is better) Translates to: CAPCHCHLALLPEAQSNTGPLRS*AAQGSS Trigger: GCTACTACCCTGTGCAGCTCAGCTTCTCAGAGGCCC...CGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR GCA 90 bp | GGCGGGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTTCCTCAGGGCCAGCTaGTCTTCTTCAGGGCTGAGG | + |
Preference number: 4 (lower is better) Translates to: GGCQLGQHSRFLPIQAGVFLRAS*SSSGLR Trigger: CCTCAGCCCTGAAGAAGAGCAGCTGGCCCTGAGGAA...GACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACCCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR GCA 90 bp | GGCGGGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTCTCCCACGAAGTTCTaGACGGCCATGTCTGCGCAG | + |
Preference number: 4 (lower is better) Translates to: GGCQLGQHSRFLPIQAGVSPTKF*TAMSAQ Trigger: CTGCGCAGACATGGCCGTGCAGAACTTCGTGGGAGA...GACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACCCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR CCA 90 bp | GAATCTTGTGAGGCGGGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCTCTAACCGGAGCATGTaGCACCCCAGCCCAGCGACC | + |
Preference number: 4 (lower is better) Translates to: ESCEAGASLASIQGSFLSSNRSM*HPSPAT Trigger: GGTCGCTGGGCTGGGGTGCCACATGCTCCGGTTAGA...GGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACCCGCCTCACAAGATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR CCA 90 bp | GGCGGGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCGTGAGCACTGTGCCATaGACGATTCCCTGGGGACCA | + |
Preference number: 4 (lower is better) Translates to: GGCQLGQHSRFLPIQAGVVSTVP*TIPWGP Trigger: TGGTCCCCAGGGAATCGTCCATGGCACAGTGCTCAC...GACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACCCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | TGTGCTCCCTGCCATTGCCACTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGGTGACAGCCAGGTCCTaGGGGTCCCCTGATGTGCAT | + |
Preference number: 4 (lower is better) Translates to: CAPCHCHLALLPEAQSNTVTARS*GSPDVH Trigger: ATGCACATCAGGGGACCCCCAGGACCTGGCTGTCAC...CGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | GGCGGGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCGGTAGTAGCCGCCATTaGACGGGTTGTGACAGGATG | + |
Preference number: 4 (lower is better) Translates to: GGCQLGQHSRFLPIQAGVGSSRH*TGCDRM Trigger: CATCCTGTCACAACCCGTTCAATGGCGGCTACTACC...GACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | TGTGCTCCCTGCCATTGCCACTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGTCTGCTCCTGCTCTCTaGGCCTCCAAGAGGAAGGCA | + |
Preference number: 4 (lower is better) Translates to: CAPCHCHLALLPEAQSNTSAPAL*ASKRKA Trigger: TGCCTTCCTCTTGGAGGCTCAGAGAGCAGGAGCAGA...CGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | GCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGGAGCCCACCACCAGCTaGTGCTTGGCAGCCTCTCGG | + |
Preference number: 4 (lower is better) Translates to: ASIQGSFLSKLESTLTGLEPTTS*CLAASR Trigger: CCGAGAGGCTGCCAAGCATCAGCTGGTGGTGGGCTC...CAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | CCTGTCTATCTTCCCCCATACTCCTCAGCACCAAGGACTTGGTGTGAGCACTTTGGGGGTCCCCTGATGTaGATACCCAGCGGAAGGGCC | + |
Preference number: 4 (lower is better) Translates to: PVYLPPYSSAPRTWCEHFGGPLM*IPSGRA Trigger: GGCCCTTCCGCTGGGTATGCACATCAGGGGACCCCC...AAAGTGCTCACACCAAGTCCTTGGTGCTGAGGAGTATGGGGGAAGATAGACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | TGTGCTCCCTGCCATTGCCACTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGAGCTCCTGTGGAAACTaGGCCACAGCAGGGTCCAAG | + |
Preference number: 4 (lower is better) Translates to: CAPCHCHLALLPEAQSNTSSCGN*ATAGSK Trigger: CTTGGACCCTGCTGTGGCCCAGTTTCCACAGGAGCT...CGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | TGTGCTCCCTGCCATTGCCACTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGCAGCATTCAGCACAGTaGGCACTGTGCCATGGACGA | + |
Preference number: 4 (lower is better) Translates to: CAPCHCHLALLPEAQSNTQHSAQ*ALCHGR Trigger: TCGTCCATGGCACAGTGCTCACTGTGCTGAATGCTG...CGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | CTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGACTTCCTTATCTTGCGTGGGCGCCAAGCCCAGAGGTaGCAAAGACCTTCCCTGCCA | + |
Preference number: 4 (lower is better) Translates to: LGIVARGPKQHDFLILRGRQAQR*QRPSLP Trigger: TGGCAGGGAAGGTCTTTGTCACCTCTGGGCTTGGCG...CCCACGCAAGATAAGGAAGTCGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | CTCTGCTATGGCTGCAGATGGGCTAAAGGCTTATTCCAAAGCTGTGCAGGGAGGCGCCAAGCCCAGAGGTaGCAAAGACCTTCCCTGCCA | + |
Preference number: 4 (lower is better) Translates to: LCYGCRWAKGLFQSCAGRRQAQR*QRPSLP Trigger: TGGCAGGGAAGGTCTTTGTCACCTCTGGGCTTGGCG...CCTCCCTGCACAGCTTTGGAATAAGCCTTTAGCCCATCTGCAGCCATAGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | CCCAGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTGCTGCTGCCTTGGCTTaGGCCCCACTCATCCCGCCA | + |
Preference number: 4 (lower is better) Translates to: PRDLWKWLVLFFMVTQLPAAALA*APLIPP Trigger: TGGCGGGATGAGTGGGGCTCAAGCCAAGGCAGCAGC...AGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | CCTGTCTATCTTCCCCCATACTCCTCAGCACCAAGGACTTGGTGTGAGCACTTTGAGGCTCTGGGCCTCTaGGAAGCTGAGCTGCACAGG | + |
Preference number: 4 (lower is better) Translates to: PVYLPPYSSAPRTWCEHFEALGL*EAELHR Trigger: CCTGTGCAGCTCAGCTTCTCAGAGGCCCAGAGCCTC...AAAGTGCTCACACCAAGTCCTTGGTGCTGAGGAGTATGGGGGAAGATAGACAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | GCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGCAGGGTTGGAGGACATaGGGCTCTGGGCCTCTGAGA | + |
Preference number: 4 (lower is better) Translates to: AYSKAVQGGEGTFRSGARQGWRT*GSGPLR Trigger: TCTCAGAGGCCCAGAGCCTCATGTCCTCCAACCCTG...CCTAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | TGTGCTCCCTGCCATTGCCACTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGTATTCGAAGTCTCCCTaGAGGGGCTGTCAGTGCCAC | + |
Preference number: 4 (lower is better) Translates to: CAPCHCHLALLPEAQSNTYSKSP*RGCQCH Trigger: GTGGCACTGACAGCCCCTTCAGGGAGACTTCGAATA...CGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | CTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGACTTCCTTATCTTGCGTGGGGCATCCAACGATGGCTaGTGCCTTGGCTTGAGCCCC | + |
Preference number: 4 (lower is better) Translates to: LGIVARGPKQHDFLILRGASNDG*CLGLSP Trigger: GGGGCTCAAGCCAAGGCAGCAGCCATCGTTGGATGC...CCCACGCAAGATAAGGAAGTCGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | GGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTGCATCCAACGATGGCTaGTGCCTTGGCTTGAGCCCC | + |
Preference number: 4 (lower is better) Translates to: GASLASIQGSFLSKLESTASNDG*CLGLSP Trigger: GGGGCTCAAGCCAAGGCAGCAGCCATCGTTGGATGC...AGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | CCTGTCTATCTTCCCCCATACTCCTCAGCACCAAGGACTTGGTGTGAGCACTTTTCTAACCGGAGCATGTaGCACCCCAGCCCAGCGACC | + |
Preference number: 4 (lower is better) Translates to: PVYLPPYSSAPRTWCEHFSNRSM*HPSPAT Trigger: GGTCGCTGGGCTGGGGTGCCACATGCTCCGGTTAGA...AAAGTGCTCACACCAAGTCCTTGGTGCTGAGGAGTATGGGGGAAGATAGACAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | CTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGACTTCCTTATCTTGCGTGGGTCGACAGGTAGGACATaGTCAGCCGGAACTGGGCCC | + |
Preference number: 4 (lower is better) Translates to: LGIVARGPKQHDFLILRGSTGRT*SAGTGP Trigger: GGGCCCAGTTCCGGCTGACCATGTCCTACCTGTCGA...CCCACGCAAGATAAGGAAGTCGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGCTGCCCGCTGTCATCTaGCCATACATGGTCACCCCC | + |
Preference number: 4 (lower is better) Translates to: AYSKAVQGGEGTFRSGARLPAVI*PYMVTP Trigger: GGGGGTGACCATGTATGGCCAGATGACAGCGGGCAG...CCTAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | CCTGTCTATCTTCCCCCATACTCCTCAGCACCAAGGACTTGGTGTGAGCACTTTACTGGGCCCAGTTGCTaGACACTTGCCCGTTGCCTC | + |
Preference number: 4 (lower is better) Translates to: PVYLPPYSSAPRTWCEHFTGPSC*TLARCL Trigger: GAGGCAACGGGCAAGTGTTCAGCAACTGGGCCCAGT...AAAGTGCTCACACCAAGTCCTTGGTGCTGAGGAGTATGGGGGAAGATAGACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR TCA 90 bp | GCTAGGGAAAGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTACTGGGCCCAGTTGCTaGACACTTGCCCGTTGCCTC | + |
Preference number: 4 (lower is better) Translates to: ARERALGYWNTPLKDWRTTGPSC*TLARCL Trigger: GAGGCAACGGGCAAGTGTTCAGCAACTGGGCCCAGT...AGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCTTTCCCTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR TCA 90 bp | GCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGCTTGGGCCAACCTGTTaGTGGCTGCGACATGCCTCC | + |
Preference number: 4 (lower is better) Translates to: ASIQGSFLSKLESTLTGLLGPTC*WLRHAS Trigger: GGAGGCATGTCGCAGCCATCAACAGGTTGGCCCAAG...CAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | GCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGTCTGCTCCTGCTCTCTaGGCCTCCAAGAGGAAGGCA | + |
Preference number: 4 (lower is better) Translates to: AYSKAVQGGEGTFRSGARSAPAL*ASKRKA Trigger: TGCCTTCCTCTTGGAGGCTCAGAGAGCAGGAGCAGA...CCTAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | CTCTGTTATCCACTCTTGCTAGCCCAGTCTGTGCCATGTGTTTGGCTCTACTCTGTCCTGGGGGTCCCCTaGTGTGCATACCCAGCGGAA | + |
Preference number: 4 (lower is better) Translates to: LCYPLLLAQSVPCVWLYSVLGVP*CAYPAE Trigger: TTCCGCTGGGTATGCACATCAGGGGACCCCCAGGAC...AGAGTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR TCA 90 bp | GCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGACACCCCCTCCATTGTaGAGTGCAACCCAGGTGGCA | + |
Preference number: 4 (lower is better) Translates to: AYSKAVQGGEGTFRSGARTPPPL*SATQVA Trigger: TGCCACCTGGGTTGCACTTCACAATGGAGGGGGTGT...CCTAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | CTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGACTTCCTTATCTTGCGTGGGTTCCTCAGGGCCAGCTaGTCTTCTTCAGGGCTGAGG | + |
Preference number: 4 (lower is better) Translates to: LGIVARGPKQHDFLILRGFLRAS*SSSGLR Trigger: CCTCAGCCCTGAAGAAGAGCAGCTGGCCCTGAGGAA...CCCACGCAAGATAAGGAAGTCGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | GGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTGCCAAGTTCTCGATaGCCAGGTACCGACGACCAG | + |
Preference number: 4 (lower is better) Translates to: GASLASIQGSFLSKLESTLPSSR*PGTDDQ Trigger: CTGGTCGTCGGTACCTGGGCATCGAGAACTTGGCAG...AGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR GCA 90 bp | CCAGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTTGGGGGTCCCCTGATGTaGATACCCAGCGGAAGGGCC | + |
Preference number: 4 (lower is better) Translates to: PGTSGSGWFCFSWSHNCLGGPLM*IPSGRA Trigger: GGCCCTTCCGCTGGGTATGCACATCAGGGGACCCCC...AAGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTAGCTCCTGTGGAAACTaGGCCACAGCAGGGTCCAAG | + |
Preference number: 4 (lower is better) Translates to: GASLASIQGSFLSKLESTSSCGN*ATAGSK Trigger: CTTGGACCCTGCTGTGGCCCAGTTTCCACAGGAGCT...AGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGGGTCACCAGCTCCTGTaGAAACTGGGCCACAGCAGG | + |
Preference number: 4 (lower is better) Translates to: ASIQGSFLSKLESTLTGLGHQLL*KLGHSR Trigger: CCTGCTGTGGCCCAGTTTCCACAGGAGCTGGTGACC...CAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCTAGGGAAAGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTCTGCCCGCTGTCATCTaGCCATACATGGTCACCCCC | + |
Preference number: 4 (lower is better) Translates to: ARERALGYWNTPLKDWRTLPAVI*PYMVTP Trigger: GGGGGTGACCATGTATGGCCAGATGACAGCGGGCAG...AGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCTTTCCCTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCTAGGGAAAGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTGTGACAGCCAGGTCCTaGGGGTCCCCTGATGTGCAT | + |
Preference number: 4 (lower is better) Translates to: ARERALGYWNTPLKDWRTVTARS*GSPDVH Trigger: ATGCACATCAGGGGACCCCCAGGACCTGGCTGTCAC...AGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCTTTCCCTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGGTGCCACTCACATCATaGTGGTCACGGCTCAGGACC | + |
Preference number: 4 (lower is better) Translates to: AYSKAVQGGEGTFRSGARVPLTS*WSRLRT Trigger: GGTCCTGAGCCGTGACCACCATGATGTGAGTGGCAC...CCTAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | CAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGTTGAGGCTCTGGGCCTCTaGGAAGCTGAGCTGCACAGG | + |
Preference number: 4 (lower is better) Translates to: QHSRFLPIQAGVYSYRPVEALGL*EAELHR Trigger: CCTGTGCAGCTCAGCTTCTCAGAGGCCCAGAGCCTC...AACAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | CAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGTTGTCCTGGGGGTCCCCTaGTGTGCATACCCAGCGGAA | + |
Preference number: 4 (lower is better) Translates to: QHSRFLPIQAGVYSYRPVVLGVP*CAYPAE Trigger: TTCCGCTGGGTATGCACATCAGGGGACCCCCAGGAC...AACAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | GCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGACGGCCTTTCTGGTCTaGGTACAGGATCCTTGCCTG | + |
Preference number: 4 (lower is better) Translates to: AYSKAVQGGEGTFRSGARTAFLV*VQDPCL Trigger: CAGGCAAGGATCCTGTACTCAGACCAGAAAGGCCGT...CCTAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | AGGCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAACACCCCCTCCATTGTaGAGTGCAACCCAGGTGGCA | + |
Preference number: 4 (lower is better) Translates to: RLIPKLCREVRGPLEVELTPPPL*SATQVA Trigger: TGCCACCTGGGTTGCACTTCACAATGGAGGGGGTGT...TAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | GAATCTTGTGAGGCGGGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCGCATTGTCTGGCAGATaGTCTCATAGGCCTTGGGGT | + |
Preference number: 4 (lower is better) Translates to: ESCEAGASLASIQGSFLSALSGR*SHRPWG Trigger: ACCCCAAGGCCTATGAGATCATCTGCCAGACAATGC...GGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACCCGCCTCACAAGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | GAATCTTGTGAGGCGGGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCCAATGTAGCAGTAGCTaGCCGCTGTCATCTGGCCAT | + |
Preference number: 4 (lower is better) Translates to: ESCEAGASLASIQGSFLSQCSSS*PLSSGH Trigger: ATGGCCAGATGACAGCGGGCAGCTACTGCTACATTG...GGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACCCGCCTCACAAGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | AGGCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTATCCAACGATGGCTGCTaGCTTGGCTTGAGCCCCACT | + |
Preference number: 4 (lower is better) Translates to: RLIPKLCREVRGPLEVELSNDGC*LGLSPT Trigger: AGTGGGGCTCAAGCCAAGGCAGCAGCCATCGTTGGA...TAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | TGTGCTCCCTGCCATTGCCACTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGGTGGCGTTTTACAAGTaGAGCTTTATCCACCTCCGC | + |
Preference number: 4 (lower is better) Translates to: CAPCHCHLALLPEAQSNTVAFYK*SFIHLR Trigger: GCGGAGGTGGATAAAGCTGCACTTGTAAAACGCCAC...CGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | GAATCTTGTGAGGCGGGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCTCCATCAGCCAGCCTTaGCGGTGGCGTTTTACAAGT | + |
Preference number: 4 (lower is better) Translates to: ESCEAGASLASIQGSFLSSISQP*RWRFTS Trigger: ACTTGTAAAACGCCACCGGCAAGGCTGGCTGATGGA...GGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACCCGCCTCACAAGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | CTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGACTTCCTTATCTTGCGTGGGCTCCTCAGGCTTTCCTaGACCAGGTGCTTGAAGGCA | + |
Preference number: 4 (lower is better) Translates to: LGIVARGPKQHDFLILRGLLRLS*TRCLKA Trigger: TGCCTTCAAGCACCTGGTGCAGGAAAGCCTGAGGAG...CCCACGCAAGATAAGGAAGTCGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | GGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTTTGATGGCTGCGACATaGCTCCTCAGGCTTTCCTGC | + |
Preference number: 4 (lower is better) Translates to: GASLASIQGSFLSKLESTLMAAT*LLRLSC Trigger: GCAGGAAAGCCTGAGGAGGCATGTCGCAGCCATCAA...AGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | GCTAGGGAAAGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTTCTCCCACGAAGTTCTaGACGGCCATGTCTGCGCAG | + |
Preference number: 4 (lower is better) Translates to: ARERALGYWNTPLKDWRTSPTKF*TAMSAQ Trigger: CTGCGCAGACATGGCCGTGCAGAACTTCGTGGGAGA...AGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCTTTCCCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | TGTGCTCCCTGCCATTGCCACTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGATCATCCTGGCTTTCTaGTCAGCCTCTGCAGTTCCA | + |
Preference number: 4 (lower is better) Translates to: CAPCHCHLALLPEAQSNTIILAF*SASAVP Trigger: TGGAACTGCAGAGGCTGAGCAGAAAGCCAGGATGAT...CGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | CTCTGCTATGGCTGCAGATGGGCTAAAGGCTTATTCCAAAGCTGTGCAGGGAGGCTCCCCTGCTTCCAGTaGTCAGGGTCAAGTGTTCTG | + |
Preference number: 4 (lower is better) Translates to: LCYGCRWAKGLFQSCAGRLPCFQ*SGSSVL Trigger: CAGAACACTTGACCCTGAGCACTGGAAGCAGGGGAG...CCTCCCTGCACAGCTTTGGAATAAGCCTTTAGCCCATCTGCAGCCATAGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | CTCTGTTATCCACTCTTGCTAGCCCAGTCTGTGCCATGTGTTTGGCTCTACTCTGGTCACCAGCTCCTGTaGAAACTGGGCCACAGCAGG | + |
Preference number: 4 (lower is better) Translates to: LCYPLLLAQSVPCVWLYSGHQLL*KLGHSR Trigger: CCTGCTGTGGCCCAGTTTCCACAGGAGCTGGTGACC...AGAGTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | CTCTGTTATCCACTCTTGCTAGCCCAGTCTGTGCCATGTGTTTGGCTCTACTCTTCGACAGGTAGGACATaGTCAGCCGGAACTGGGCCC | + |
Preference number: 4 (lower is better) Translates to: LCYPLLLAQSVPCVWLYSSTGRT*SAGTGP Trigger: GGGCCCAGTTCCGGCTGACCATGTCCTACCTGTCGA...AGAGTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | CCTGTCTATCTTCCCCCATACTCCTCAGCACCAAGGACTTGGTGTGAGCACTTTGTGAGCACTGTGCCATaGACGATTCCCTGGGGACCA | + |
Preference number: 4 (lower is better) Translates to: PVYLPPYSSAPRTWCEHFVSTVP*TIPWGP Trigger: TGGTCCCCAGGGAATCGTCCATGGCACAGTGCTCAC...AAAGTGCTCACACCAAGTCCTTGGTGCTGAGGAGTATGGGGGAAGATAGACAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGGAGGACATGAGGCTCTaGGCCTCTGAGAAGCTGAGC | + |
Preference number: 4 (lower is better) Translates to: ASIQGSFLSKLESTLTGLEDMRL*ASEKLS Trigger: GCTCAGCTTCTCAGAGGCCCAGAGCCTCATGTCCTC...CAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCTAGGGAAAGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTGAGGACATGAGGCTCTaGGCCTCTGAGAAGCTGAGC | + |
Preference number: 4 (lower is better) Translates to: ARERALGYWNTPLKDWRTEDMRL*ASEKLS Trigger: GCTCAGCTTCTCAGAGGCCCAGAGCCTCATGTCCTC...AGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCTTTCCCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGCCACTCACATCATGGTaGTCACGGCTCAGGACCACT | + |
Preference number: 4 (lower is better) Translates to: AYSKAVQGGEGTFRSGARPLTSW*SRLRTT Trigger: AGTGGTCCTGAGCCGTGACCACCATGATGTGAGTGG...CCTAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | AGGCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGTGCCACTCACATCATaGTGGTCACGGCTCAGGACC | + |
Preference number: 4 (lower is better) Translates to: RLIPKLCREVRGPLEVELVPLTS*WSRLRT Trigger: GGTCCTGAGCCGTGACCACCATGATGTGAGTGGCAC...TAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCTAGGGAAAGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTGAAGTGCAACCCAGGTaGCACCACGACAGGCATCTC | + |
Preference number: 4 (lower is better) Translates to: ARERALGYWNTPLKDWRTEVQPR*HHDRHL Trigger: GAGATGCCTGTCGTGGTGCCACCTGGGTTGCACTTC...AGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCTTTCCCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | GGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTGGTGTCCACTGTACATaGCCAGAGTCTGTTCCTCAG | + |
Preference number: 4 (lower is better) Translates to: GASLASIQGSFLSKLESTGVHCT*PESVPQ Trigger: CTGAGGAACAGACTCTGGTCATGTACAGTGGACACC...AGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | GCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGGGTGTCCACTGTACATaGCCAGAGTCTGTTCCTCAG | + |
Preference number: 4 (lower is better) Translates to: AYSKAVQGGEGTFRSGARGVHCT*PESVPQ Trigger: CTGAGGAACAGACTCTGGTCATGTACAGTGGACACC...CCTAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | GCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGCCATTGAACGGGTTGTaGCAGGATGTCTGGTCTGAC | + |
Preference number: 4 (lower is better) Translates to: AYSKAVQGGEGTFRSGARPLNGL*QDVWSD Trigger: GTCAGACCAGACATCCTGTCACAACCCGTTCAATGG...CCTAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | CCAGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTTCAGGGTTGGAGGACATaGGGCTCTGGGCCTCTGAGA | + |
Preference number: 4 (lower is better) Translates to: PGTSGSGWFCFSWSHNCLQGWRT*GSGPLR Trigger: TCTCAGAGGCCCAGAGCCTCATGTCCTCCAACCCTG...AAGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | AGGCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAACAGATGTGGCCAGATaGTCAGTGACAGCCAGGTCC | + |
Preference number: 4 (lower is better) Translates to: RLIPKLCREVRGPLEVELTDVAR*SVTARS Trigger: GGACCTGGCTGTCACTGATCATCTGGCCACATCTGT...TAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | CCTGTCTATCTTCCCCCATACTCCTCAGCACCAAGGACTTGGTGTGAGCACTTTACAGATGTGGCCAGATaGTCAGTGACAGCCAGGTCC | + |
Preference number: 4 (lower is better) Translates to: PVYLPPYSSAPRTWCEHFTDVAR*SVTARS Trigger: GGACCTGGCTGTCACTGATCATCTGGCCACATCTGT...AAAGTGCTCACACCAAGTCCTTGGTGCTGAGGAGTATGGGGGAAGATAGACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | GCTCATAGTGTAATTTTGCTCTGCCATGTGCTCCCTGCCATTGCCACTTGGCATCTGCCAAGTTCTCGATaGCCAGGTACCGACGACCAG | + |
Preference number: 4 (lower is better) Translates to: AHSVILLCHVLPAIATWHLPSSR*PGTDDQ Trigger: CTGGTCGTCGGTACCTGGGCATCGAGAACTTGGCAG...ATGCCAAGTGGCAATGGCAGGGAGCACATGGCAGAGCAAAATTACACTATGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | CCCAGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTTCCAACGATGGCTGCTaGCTTGGCTTGAGCCCCACT | + |
Preference number: 4 (lower is better) Translates to: PRDLWKWLVLFFMVTQLPSNDGC*LGLSPT Trigger: AGTGGGGCTCAAGCCAAGGCAGCAGCCATCGTTGGA...AGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | AGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTTGGGTCCAATCATGCTCTCTCCCCTaGTTCCAGTGCTCAGGGTCA | + |
Preference number: 4 (lower is better) Translates to: RALGYWNTPLKDWRTWVQSCSLP*FQCSGS Trigger: TGACCCTGAGCACTGGAAGCAGGGGAGAGAGCATGA...TTGGACCCAAGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGTGCCCGTGTCCGGCATaGGTACTGATCAATTGGGTA | + |
Preference number: 4 (lower is better) Translates to: AYSKAVQGGEGTFRSGARCPCPA*VLINWV Trigger: TACCCAATTGATCAGTACCCATGCCGGACACGGGCA...CCTAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGGCCACACGGCCTTTCTaGTCTGAGTACAGGATCCTT | + |
Preference number: 4 (lower is better) Translates to: AYSKAVQGGEGTFRSGARATRPF*SEYRIL Trigger: AAGGATCCTGTACTCAGACCAGAAAGGCCGTGTGGC...CCTAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | CCTGTCTATCTTCCCCCATACTCCTCAGCACCAAGGACTTGGTGTGAGCACTTTCCACTCACATCATGGTaGTCACGGCTCAGGACCACT | + |
Preference number: 4 (lower is better) Translates to: PVYLPPYSSAPRTWCEHFPLTSW*SRLRTT Trigger: AGTGGTCCTGAGCCGTGACCACCATGATGTGAGTGG...AAAGTGCTCACACCAAGTCCTTGGTGCTGAGGAGTATGGGGGAAGATAGACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR CAA 72 bp | CTGGCCACTTTGCCTCAGAGACTCTGTTATCCACTCTaGCTAGCCCAGTCTGTGCCATGTGTTTGGCTCTAC | + |
Preference number: 4 (lower is better) Translates to: LATLPQRLCYPL*LAQSVPCVWLY Trigger: GTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAGTCTCTGAGGCAAAGTGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR CAA 72 bp | AATTTTGCTCTGCCATGTGCTCCCTGCCATTGCCACTaGGCATTGTTGCCAGAGGCCCAAAGCAACACGACT | + |
Preference number: 4 (lower is better) Translates to: NFALPCAPCHCH*ALLPEAQSNTT Trigger: AGTCGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACATGGCAGAGCAAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR TCA 90 bp | CTCTGTTATCCACTCTTGCTAGCCCAGTCTGTGCCATGTGTTTGGCTCTACTCTGGTAGTAGCCGCCATTaGACGGGTTGTGACAGGATG | + |
Preference number: 4 (lower is better) Translates to: LCYPLLLAQSVPCVWLYSGSSRH*TGCDRM Trigger: CATCCTGTCACAACCCGTTCAATGGCGGCTACTACC...AGAGTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | CCCAGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTTATTCGAAGTCTCCCTaGAGGGGCTGTCAGTGCCAC | + |
Preference number: 4 (lower is better) Translates to: PRDLWKWLVLFFMVTQLPYSKSP*RGCQCH Trigger: GTGGCACTGACAGCCCCTTCAGGGAGACTTCGAATA...AGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | AGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTTGGGTCCAATGGAGACATCCCAGCTaGGCATCATCCTGGCTTTCT | + |
Preference number: 4 (lower is better) Translates to: RALGYWNTPLKDWRTWVQWRHPS*ASSWLS Trigger: AGAAAGCCAGGATGATGCTCAGCTGGGATGTCTCCA...TTGGACCCAAGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR TCA 90 bp | GCTAGGGAAAGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTTGGAGACATCCCAGCTaGGCATCATCCTGGCTTTCT | + |
Preference number: 4 (lower is better) Translates to: ARERALGYWNTPLKDWRTWRHPS*ASSWLS Trigger: AGAAAGCCAGGATGATGCTCAGCTGGGATGTCTCCA...AGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCTTTCCCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | GCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGAGGCTCTCATCTCAATaGTGGGGCAGAACCGGTACA | + |
Preference number: 4 (lower is better) Translates to: ASIQGSFLSKLESTLTGLRLSSQ*WGRTGT Trigger: TGTACCGGTTCTGCCCCAGCATTGAGATGAGAGCCT...CAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | AGGCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTACAATGTAGCAGTAGCTaGCCGCTGTCATCTGGCCAT | + |
Preference number: 4 (lower is better) Translates to: RLIPKLCREVRGPLEVELQCSSS*PLSSGH Trigger: ATGGCCAGATGACAGCGGGCAGCTACTGCTACATTG...TAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | GCTAGGGAAAGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTTCCATCAGCCAGCCTTaGCGGTGGCGTTTTACAAGT | + |
Preference number: 4 (lower is better) Translates to: ARERALGYWNTPLKDWRTSISQP*RWRFTS Trigger: ACTTGTAAAACGCCACCGGCAAGGCTGGCTGATGGA...AGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCTTTCCCTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR GCA 90 bp | CCCAGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTTTGATGGCTGCGACATaGCTCCTCAGGCTTTCCTGC | + |
Preference number: 4 (lower is better) Translates to: PRDLWKWLVLFFMVTQLPLMAAT*LLRLSC Trigger: GCAGGAAAGCCTGAGGAGGCATGTCGCAGCCATCAA...AGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | CCCAGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTGAATGGCCCAAGTCATaGTCTCTCCCCTGCTTCCAG | + |
Preference number: 4 (lower is better) Translates to: PRDLWKWLVLFFMVTQLPEWPKS*SLPCFQ Trigger: CTGGAAGCAGGGGAGAGAGCATGACTTGGGCCATTC...AGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGAACTGTCTTAGCTCCTaGGCAAACTCCAGGGCCAAC | + |
Preference number: 4 (lower is better) Translates to: ASIQGSFLSKLESTLTGLNCLSS*ANSRAN Trigger: GTTGGCCCTGGAGTTTGCCCAGGAGCTAAGACAGTT...CAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR CCA 90 bp | CTCTGTTATCCACTCTTGCTAGCCCAGTCTGTGCCATGTGTTTGGCTCTACTCTCCACTGGCGATGGCCTaGTTAATGGCCACAGCAATG | + |
Preference number: 4 (lower is better) Translates to: LCYPLLLAQSVPCVWLYSPLAMA*LMATAM Trigger: CATTGCTGTGGCCATTAACCAGGCCATCGCCAGTGG...AGAGTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | CCAGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTTGAAGTGCAACCCAGGTaGCACCACGACAGGCATCTC | + |
Preference number: 4 (lower is better) Translates to: PGTSGSGWFCFSWSHNCLEVQPR*HHDRHL Trigger: GAGATGCCTGTCGTGGTGCCACCTGGGTTGCACTTC...AAGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
||
CDS-3UTR TCA 90 bp | AGGCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTATTTTCCTTGCTTCCCTaGGTCTTGCAATGCAGCGGT | + |
Preference number: 4 (lower is better) Translates to: RLIPKLCREVRGPLEVELFSLLP*VLQCSG Trigger: ACCGCTGCATTGCAAGACTCAGGGAAGCAAGGAAAA...TAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046128.12 |
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CDS-3UTR TCA 90 bp | GCTCATAGTGTAATTTTGCTCTGCCATGTGCTCCCTGCCATTGCCACTTGGCATCCATTGAACGGGTTGTaGCAGGATGTCTGGTCTGAC | + |
Preference number: 4 (lower is better) Translates to: AHSVILLCHVLPAIATWHPLNGL*QDVWSD Trigger: GTCAGACCAGACATCCTGTCACAACCCGTTCAATGG...ATGCCAAGTGGCAATGGCAGGGAGCACATGGCAGAGCAAAATTACACTATGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | CTCTGTTATCCACTCTTGCTAGCCCAGTCTGTGCCATGTGTTTGGCTCTACTCTGCATTGTCTGGCAGATaGTCTCATAGGCCTTGGGGT | + |
Preference number: 4 (lower is better) Translates to: LCYPLLLAQSVPCVWLYSALSGR*SHRPWG Trigger: ACCCCAAGGCCTATGAGATCATCTGCCAGACAATGC...AGAGTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | CAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGTTCTCCTCAGGCTTTCCTaGACCAGGTGCTTGAAGGCA | + |
Preference number: 4 (lower is better) Translates to: QHSRFLPIQAGVYSYRPVLLRLS*TRCLKA Trigger: TGCCTTCAAGCACCTGGTGCAGGAAAGCCTGAGGAG...AACAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | GCTAGGGAAAGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTATCATCCTGGCTTTCTaGTCAGCCTCTGCAGTTCCA | + |
Preference number: 4 (lower is better) Translates to: ARERALGYWNTPLKDWRTIILAF*SASAVP Trigger: TGGAACTGCAGAGGCTGAGCAGAAAGCCAGGATGAT...AGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCTTTCCCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | GCTCATAGTGTAATTTTGCTCTGCCATGTGCTCCCTGCCATTGCCACTTGGCATACCGTACCTGAGTCTTaGAATGCAGCGGTCCAAGCT | + |
Preference number: 4 (lower is better) Translates to: AHSVILLCHVLPAIATWHTVPES*NAAVQA Trigger: AGCTTGGACCGCTGCATTGCAAGACTCAGGTACGGT...ATGCCAAGTGGCAATGGCAGGGAGCACATGGCAGAGCAAAATTACACTATGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | CTCTGTTATCCACTCTTGCTAGCCCAGTCTGTGCCATGTGTTTGGCTCTACTCTAACTGTCTTAGCTCCTaGGCAAACTCCAGGGCCAAC | + |
Preference number: 4 (lower is better) Translates to: LCYPLLLAQSVPCVWLYSNCLSS*ANSRAN Trigger: GTTGGCCCTGGAGTTTGCCCAGGAGCTAAGACAGTT...AGAGTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCTCATAGTGTAATTTTGCTCTGCCATGTGCTCCCTGCCATTGCCACTTGGCATTGCCCGTGTCCGGCATaGGTACTGATCAATTGGGTA | + |
Preference number: 4 (lower is better) Translates to: AHSVILLCHVLPAIATWHCPCPA*VLINWV Trigger: TACCCAATTGATCAGTACCCATGCCGGACACGGGCA...ATGCCAAGTGGCAATGGCAGGGAGCACATGGCAGAGCAAAATTACACTATGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | CAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGTTCCACTGGCGATGGCCTaGTTAATGGCCACAGCAATG | + |
Preference number: 4 (lower is better) Translates to: QHSRFLPIQAGVYSYRPVPLAMA*LMATAM Trigger: CATTGCTGTGGCCATTAACCAGGCCATCGCCAGTGG...AACAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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3UTR CAA 72 bp | AGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTaGGGTCCAAGCGTCTCTTCTTTCTTCCTGGCTCAT | + |
Preference number: 4 (lower is better) Translates to: RLLEHTLEGLED*GPSVSSFFLAH Trigger: ATGAGCCAGGAAGAAAGAAGAGACGCTTGGACCCAAGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | CAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGTTGACAAAGACCTTCCCTaGCAAGTTCTCGATGCCCAG | + |
Preference number: 4 (lower is better) Translates to: QHSRFLPIQAGVYSYRPVDKDLP*QVLDAQ Trigger: CTGGGCATCGAGAACTTGGCAGGGAAGGTCTTTGTC...AACAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | CTCTGTTATCCACTCTTGCTAGCCCAGTCTGTGCCATGTGTTTGGCTCTACTCTGTGGCGTTTTACAAGTaGAGCTTTATCCACCTCCGC | + |
Preference number: 4 (lower is better) Translates to: LCYPLLLAQSVPCVWLYSVAFYK*SFIHLR Trigger: GCGGAGGTGGATAAAGCTGCACTTGTAAAACGCCAC...AGAGTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | CTCTGTTATCCACTCTTGCTAGCCCAGTCTGTGCCATGTGTTTGGCTCTACTCTCTCTCATCTCAATGCTaGGGCAGAACCGGTACATGT | + |
Preference number: 4 (lower is better) Translates to: LCYPLLLAQSVPCVWLYSLSSQC*GRTGTC Trigger: ACATGTACCGGTTCTGCCCCAGCATTGAGATGAGAG...AGAGTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GAATCTTGTGAGGCGGGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCGGAACTCCATCTTGTTaGCTCCTTTCTTCTCTACAT | + |
Preference number: 4 (lower is better) Translates to: ESCEAGASLASIQGSFLSGTPSC*LLSSLH Trigger: ATGTAGAGAAGAAAGGAGCCAACAAGATGGAGTTCC...GGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACCCGCCTCACAAGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR TCA 90 bp | AGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTTTTACGGCCTTTCTGGTCTaGGTACAGGATCCTTGCCTG | + |
Preference number: 4 (lower is better) Translates to: RDLWKWLVLFFMVTQLPFTAFLV*VQDPCL Trigger: CAGGCAAGGATCCTGTACTCAGACCAGAAAGGCCGT...AAAAGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | CTCTGTTATCCACTCTTGCTAGCCCAGTCTGTGCCATGTGTTTGGCTCTACTCTTTGTTCATGATCATGTaGATGATGGCTGCAGCTGCC | + |
Preference number: 4 (lower is better) Translates to: LCYPLLLAQSVPCVWLYSLFMIM*MMAAAA Trigger: GGCAGCTGCAGCCATCATGCACATGATCATGAACAA...AGAGTAGAGCCAAACACATGGCACAGACTGGGCTAGCAAGAGTGGATAACAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGTGGGTACTGATCAATTaGGTAGGCTCTCATCTCAAT | + |
Preference number: 4 (lower is better) Translates to: AYSKAVQGGEGTFRSGARWVLIN*VGSHLN Trigger: ATTGAGATGAGAGCCTACCCAATTGATCAGTACCCA...CCTAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCTAGGGAAAGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTAAGAAGAACTTCTCTTaGGCCAACCTGTTGATGGCT | + |
Preference number: 4 (lower is better) Translates to: ARERALGYWNTPLKDWRTKKNFS*ANLLMA Trigger: AGCCATCAACAGGTTGGCCCAAGAGAAGTTCTTCTT...AGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCTTTCCCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGTCACTCCATCAGCAATaGCTTTCTCCAGTACAGATG | + |
Preference number: 4 (lower is better) Translates to: ASIQGSFLSKLESTLTGLSLHQQ*LSPVQM Trigger: CATCTGTACTGGAGAAAGCCATTGCTGATGGAGTGA...CAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | AGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTTTTAGGCTCTCATCTCAATaGTGGGGCAGAACCGGTACA | + |
Preference number: 4 (lower is better) Translates to: RDLWKWLVLFFMVTQLPFRLSSQ*WGRTGT Trigger: TGTACCGGTTCTGCCCCAGCATTGAGATGAGAGCCT...AAAAGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | AGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTTTTGACAAAGACCTTCCCTaGCAAGTTCTCGATGCCCAG | + |
Preference number: 4 (lower is better) Translates to: RDLWKWLVLFFMVTQLPFDKDLP*QVLDAQ Trigger: CTGGGCATCGAGAACTTGGCAGGGAAGGTCTTTGTC...AAAAGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | AGGCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTATGGGTACTGATCAATTaGGTAGGCTCTCATCTCAAT | + |
Preference number: 4 (lower is better) Translates to: RLIPKLCREVRGPLEVELWVLIN*VGSHLN Trigger: ATTGAGATGAGAGCCTACCCAATTGATCAGTACCCA...TAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCTCATAGTGTAATTTTGCTCTGCCATGTGCTCCCTGCCATTGCCACTTGGCATTCACTCCATCAGCAATaGCTTTCTCCAGTACAGATG | + |
Preference number: 4 (lower is better) Translates to: AHSVILLCHVLPAIATWHSLHQQ*LSPVQM Trigger: CATCTGTACTGGAGAAAGCCATTGCTGATGGAGTGA...ATGCCAAGTGGCAATGGCAGGGAGCACATGGCAGAGCAAAATTACACTATGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | AGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTTTTGCCACACGGCCTTTCTaGTCTGAGTACAGGATCCTT | + |
Preference number: 4 (lower is better) Translates to: RDLWKWLVLFFMVTQLPFATRPF*SEYRIL Trigger: AAGGATCCTGTACTCAGACCAGAAAGGCCGTGTGGC...AAAAGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | CCAGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTTAAGAAGAACTTCTCTTaGGCCAACCTGTTGATGGCT | + |
Preference number: 4 (lower is better) Translates to: PGTSGSGWFCFSWSHNCLKKNFS*ANLLMA Trigger: AGCCATCAACAGGTTGGCCCAAGAGAAGTTCTTCTT...AAGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | GCTCATAGTGTAATTTTGCTCTGCCATGTGCTCCCTGCCATTGCCACTTGGCATGGAACTCCATCTTGTTaGCTCCTTTCTTCTCTACAT | + |
Preference number: 4 (lower is better) Translates to: AHSVILLCHVLPAIATWHGTPSC*LLSSLH Trigger: ATGTAGAGAAGAAAGGAGCCAACAAGATGGAGTTCC...ATGCCAAGTGGCAATGGCAGGGAGCACATGGCAGAGCAAAATTACACTATGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CCA 90 bp | AGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTTTTACATCAGGCACTGAATaGCCCAAGTCATGCTCTCTC | + |
Preference number: 4 (lower is better) Translates to: RDLWKWLVLFFMVTQLPFTSGTE*PKSCSL Trigger: GAGAGAGCATGACTTGGGCCATTCAGTGCCTGATGT...AAAAGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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3UTR CAA 72 bp | GCAAGAAACATAGACCAAAATGCCAGAAAGCCGATTTaGACCTCTGCTATGGCTGCAGATGGGCTAAAGGCT | + |
Preference number: 4 (lower is better) Translates to: ARNIDQNARKPI*TSAMAADGLKA Trigger: AGCCTTTAGCCCATCTGCAGCCATAGCAGAGGTCAAAATCGGCTTTCTGGCATTTTGGTCTATGTTTCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR GCA 90 bp | CAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGTTCTCCTTCTTTTTCCTTaGTTCCCTGTGGTCAAACAT | + |
Preference number: 4 (lower is better) Translates to: QHSRFLPIQAGVYSYRPVLLLFP*FPVVKH Trigger: ATGTTTGACCACAGGGAAGCAAGGAAAAAGAAGGAG...AACAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS CCA 90 bp | GGAGGAGTAGTTGGGAATGACCATCCCGTTAGTGATGACCAGCCGTaGGGCACGGGGGCTGCTGGGGAAGAGGCCCAGAGGGTGTCCACT | + |
Preference number: 5 (lower is better) Translates to: GGVVGNDHPVSDDQP*GTGAAGEEAQRVST Trigger: AGTGGACACCCTCTGGGCCTCTTCCCCAGCAGCCCCCGTGCCCCACGGCTGGTCATCACTAACGGGATGGTCATTCCCAACTACTCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 90 bp | CTGCTGCCTTGGCTTGAGCCCCACTCATCCCGCCAAGCCCAGAGGTaGCAAAGACCTTCCCTGCCAAGTTCTCGATGCCCAGGTACCGAC | + |
Preference number: 5 (lower is better) Translates to: LLPWLEPHSSRQAQR*QRPSLPSSRCPGTD Trigger: GTCGGTACCTGGGCATCGAGAACTTGGCAGGGAAGGTCTTTGTCACCTCTGGGCTTGGCGGGATGAGTGGGGCTCAAGCCAAGGCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 90 bp | AGCCCCACTCATCCCGCCAAGCCCAGAGGTGACAAAGACCTTCCCTaGCAAGTTCTCGATGCCCAGGTACCGACGACCAGCATTCAGCAC | + |
Preference number: 5 (lower is better) Translates to: SPTHPAKPRGDKDLP*QVLDAQVPTTSIQH Trigger: GTGCTGAATGCTGGTCGTCGGTACCTGGGCATCGAGAACTTGGCAGGGAAGGTCTTTGTCACCTCTGGGCTTGGCGGGATGAGTGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 90 bp | GTGCAGCTTTATCCACCTCCGCAATCACCCCAATGCATCCAACGATaGCTGCTGCCTTGGCTTGAGCCCCACTCATCCCGCCAAGCCCAG | + |
Preference number: 5 (lower is better) Translates to: VQLYPPPQSPQCIQR*LLPWLEPHSSRQAQ Trigger: CTGGGCTTGGCGGGATGAGTGGGGCTCAAGCCAAGGCAGCAGCCATCGTTGGATGCATTGGGGTGATTGCGGAGGTGGATAAAGCTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 90 bp | CGGCTCAGGACCACTGGTGCCTTGATCTTCCCACTGGCGATGGCCTaGTTAATGGCCACAGCAATGGCCACACGGCCTTTCTGGTCTGAG | + |
Preference number: 5 (lower is better) Translates to: RLRTTGALIFPLAMA*LMATAMATRPFWSE Trigger: CTCAGACCAGAAAGGCCGTGTGGCCATTGCTGTGGCCATTAACCAGGCCATCGCCAGTGGGAAGATCAAGGCACCAGTGGTCCTGAGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 90 bp | CTTCACCCCAGCCTACACCCCCTCCATTGTGAAGTGCAACCCAGGTaGCACCACGACAGGCATCTCCCACGAAGTTCTGCACGGCCATGT | + |
Preference number: 5 (lower is better) Translates to: LHPSLHPLHCEVQPR*HHDRHLPRSSARPC Trigger: ACATGGCCGTGCAGAACTTCGTGGGAGATGCCTGTCGTGGTGCCACCTGGGTTGCACTTCACAATGGAGGGGGTGTAGGCTGGGGTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | GGCGGGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCCGTCGTGCCACACCATaGGAGACATCCCAGCTGAGC | + |
Preference number: 5 (lower is better) Translates to: GGCQLGQHSRFLPIQAGVRRATP*ETSQLS Trigger: GCTCAGCTGGGATGTCTCCAATGGTGTGGCACGACG...GACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACCCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 90 bp | CACGGGGGCTGCTGGGGAAGAGGCCCAGAGGGTGTCCACTGTACATaGCCAGAGTCTGTTCCTCAGTCATCTTCGACAGGTAGGACATGG | + |
Preference number: 5 (lower is better) Translates to: HGGCWGRGPEGVHCT*PESVPQSSSTGRTW Trigger: CCATGTCCTACCTGTCGAAGATGACTGAGGAACAGACTCTGGTCATGTACAGTGGACACCCTCTGGGCCTCTTCCCCAGCAGCCCCCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 90 bp | TCCGCAATCACCCCAATGCATCCAACGATGGCTGCTGCCTTGGCTTaGGCCCCACTCATCCCGCCAAGCCCAGAGGTGACAAAGACCTTC | + |
Preference number: 5 (lower is better) Translates to: SAITPMHPTMAAALA*APLIPPSPEVTKTF Trigger: GAAGGTCTTTGTCACCTCTGGGCTTGGCGGGATGAGTGGGGCTCAAGCCAAGGCAGCAGCCATCGTTGGATGCATTGGGGTGATTGCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 90 bp | GTGCTTGAAGGCAGCAGGGTTGGAGGACATGAGGCTCTGGGCCTCTaGGAAGCTGAGCTGCACAGGGTAGTAGCCGCCATTGAACGGGTT | + |
Preference number: 5 (lower is better) Translates to: VLEGSRVGGHEALGL*EAELHRVVAAIERV Trigger: AACCCGTTCAATGGCGGCTACTACCCTGTGCAGCTCAGCTTCTCAGAGGCCCAGAGCCTCATGTCCTCCAACCCTGCTGCCTTCAAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 90 bp | AGATGTGGCCAGATGATCAGTGACAGCCAGGTCCTGGGGGTCCCCTaGTGTGCATACCCAGCGGAAGGGCCCAAAGCCCTGGGAGAATAT | + |
Preference number: 5 (lower is better) Translates to: RCGQMISDSQVLGVP*CAYPAEGPKALGEY Trigger: ATATTCTCCCAGGGCTTTGGGCCCTTCCGCTGGGTATGCACATCAGGGGACCCCCAGGACCTGGCTGTCACTGATCATCTGGCCACATCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 90 bp | GGCCTGGTTAATGGCCACAGCAATGGCCACACGGCCTTTCTGGTCTaGGTACAGGATCCTTGCCTGGGAGCCCACCACCAGCTGATGCTT | + |
Preference number: 5 (lower is better) Translates to: GLVNGHSNGHTAFLV*VQDPCLGAHHQLML Trigger: AAGCATCAGCTGGTGGTGGGCTCCCAGGCAAGGATCCTGTACTCAGACCAGAAAGGCCGTGTGGCCATTGCTGTGGCCATTAACCAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 90 bp | TTTATCCACCTCCGCAATCACCCCAATGCATCCAACGATGGCTGCTaGCTTGGCTTGAGCCCCACTCATCCCGCCAAGCCCAGAGGTGAC | + |
Preference number: 5 (lower is better) Translates to: FIHLRNHPNASNDGC*LGLSPTHPAKPRGD Trigger: GTCACCTCTGGGCTTGGCGGGATGAGTGGGGCTCAAGCCAAGGCAGCAGCCATCGTTGGATGCATTGGGGTGATTGCGGAGGTGGATAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 90 bp | AGCTTTATCCACCTCCGCAATCACCCCAATGCATCCAACGATGGCTaGTGCCTTGGCTTGAGCCCCACTCATCCCGCCAAGCCCAGAGGT | + |
Preference number: 5 (lower is better) Translates to: SFIHLRNHPNASNDG*CLGLSPTHPAKPRG Trigger: ACCTCTGGGCTTGGCGGGATGAGTGGGGCTCAAGCCAAGGCAGCAGCCATCGTTGGATGCATTGGGGTGATTGCGGAGGTGGATAAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 90 bp | TTCGAAGTCTCCCTGAAGGGGCTGTCAGTGCCACTCACATCATGGTaGTCACGGCTCAGGACCACTGGTGCCTTGATCTTCCCACTGGCG | + |
Preference number: 5 (lower is better) Translates to: FEVSLKGLSVPLTSW*SRLRTTGALIFPLA Trigger: CGCCAGTGGGAAGATCAAGGCACCAGTGGTCCTGAGCCGTGACCACCATGATGTGAGTGGCACTGACAGCCCCTTCAGGGAGACTTCGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 90 bp | CCCATTGATGACTTCACCCCAGCCTACACCCCCTCCATTGTGAAGTaGAACCCAGGTGGCACCACGACAGGCATCTCCCACGAAGTTCTG | + |
Preference number: 5 (lower is better) Translates to: PIDDFTPAYTPSIVK*NPGGTTTGISHEVL Trigger: CAGAACTTCGTGGGAGATGCCTGTCGTGGTGCCACCTGGGTTGCACTTCACAATGGAGGGGGTGTAGGCTGGGGTGAAGTCATCAATGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 90 bp | CAGCGGTCCAAGCTGTCTGTCACCTCCATCAGCCAGCCTTGCCGGTaGCGTTTTACAAGTGCAGCTTTATCCACCTCCGCAATCACCCCA | + |
Preference number: 5 (lower is better) Translates to: QRSKLSVTSISQPCR*RFTSAALSTSAITP Trigger: TGGGGTGATTGCGGAGGTGGATAAAGCTGCACTTGTAAAACGCCACCGGCAAGGCTGGCTGATGGAGGTGACAGACAGCTTGGACCGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | CCCAGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTGGCTGCTGCCTTGGCTaGAGCCCCACTCATCCCGCC | + |
Preference number: 5 (lower is better) Translates to: PRDLWKWLVLFFMVTQLPGCCLG*SPTHPA Trigger: GGCGGGATGAGTGGGGCTCAAGCCAAGGCAGCAGCC...AGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | TGTGCTCCCTGCCATTGCCACTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGAGGACCACTGGTGCCTaGATCTTCCCACTGGCGATG | + |
Preference number: 5 (lower is better) Translates to: CAPCHCHLALLPEAQSNTRTTGA*IFPLAM Trigger: CATCGCCAGTGGGAAGATCAAGGCACCAGTGGTCCT...CGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAGTGGCAATGGCAGGGAGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 90 bp | AGGGTAGTAGCCGCCATTGAACGGGTTGTGACAGGATGTCTGGTCTaGCCCGAGGTCCACCAAGAGTTCCCCCGTTGTGTCCAGTTCATG | + |
Preference number: 5 (lower is better) Translates to: RVVAAIERVVTGCLV*PEVHQEFPRCVQFM Trigger: CATGAACTGGACACAACGGGGGAACTCTTGGTGGACCTCGGGTCAGACCAGACATCCTGTCACAACCCGTTCAATGGCGGCTACTACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 90 bp | CATCAGCAATGGCTTTCTCCAGTACAGATGTGGCCAGATGATCAGTaGCAGCCAGGTCCTGGGGGTCCCCTGATGTGCATACCCAGCGGA | + |
Preference number: 5 (lower is better) Translates to: HQQWLSPVQMWPDDQ*QPGPGGPLMCIPSG Trigger: TCCGCTGGGTATGCACATCAGGGGACCCCCAGGACCTGGCTGTCACTGATCATCTGGCCACATCTGTACTGGAGAAAGCCATTGCTGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 90 bp | GGCCACAGCAGGGTCCAAGTTGTTCATGATCATGTGCATGATGGCTaGAGCTGCCCGTGTCCGGCATGGGTACTGATCAATTGGGTAGGC | + |
Preference number: 5 (lower is better) Translates to: GHSRVQVVHDHVHDG*SCPCPAWVLINWVG Trigger: GCCTACCCAATTGATCAGTACCCATGCCGGACACGGGCAGCTGCAGCCATCATGCACATGATCATGAACAACTTGGACCCTGCTGTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 90 bp | CAGAAGAAGAACTTCTCTTGGGCCAACCTGTTGATGGCTGCGACATaGCTCCTCAGGCTTTCCTGCACCAGGTGCTTGAAGGCAGCAGGG | + |
Preference number: 5 (lower is better) Translates to: QKKNFSWANLLMAAT*LLRLSCTRCLKAAG Trigger: CCCTGCTGCCTTCAAGCACCTGGTGCAGGAAAGCCTGAGGAGGCATGTCGCAGCCATCAACAGGTTGGCCCAAGAGAAGTTCTTCTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 90 bp | GGTCAAGTGTTCTGGGTCCCATACAGCCAAACCGTACCTGAGTCTTaGAATGCAGCGGTCCAAGCTGTCTGTCACCTCCATCAGCCAGCC | + |
Preference number: 5 (lower is better) Translates to: GQVFWVPYSQTVPES*NAAVQAVCHLHQPA Trigger: GGCTGGCTGATGGAGGTGACAGACAGCTTGGACCGCTGCATTGCAAGACTCAGGTACGGTTTGGCTGTATGGGACCCAGAACACTTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | CTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGACTTCCTTATCTTGCGTGGGCTGAGTACAGGATCCTaGCCTGGGAGCCCACCACCA | + |
Preference number: 5 (lower is better) Translates to: LGIVARGPKQHDFLILRGLSTGS*PGSPPP Trigger: TGGTGGTGGGCTCCCAGGCAAGGATCCTGTACTCAG...CCCACGCAAGATAAGGAAGTCGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | CTCTGCTATGGCTGCAGATGGGCTAAAGGCTTATTCCAAAGCTGTGCAGGGAGGCGTCGTGCCACACCATaGGAGACATCCCAGCTGAGC | + |
Preference number: 5 (lower is better) Translates to: LCYGCRWAKGLFQSCAGRRRATP*ETSQLS Trigger: GCTCAGCTGGGATGTCTCCAATGGTGTGGCACGACG...CCTCCCTGCACAGCTTTGGAATAAGCCTTTAGCCCATCTGCAGCCATAGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 90 bp | GGTCAAACATCAGGCACTGAATGGCCCAAGTCATGCTCTCTCCCCTaGTTCCAGTGCTCAGGGTCAAGTGTTCTGGGTCCCATACAGCCA | + |
Preference number: 5 (lower is better) Translates to: GQTSGTEWPKSCSLP*FQCSGSSVLGPIQP Trigger: TGGCTGTATGGGACCCAGAACACTTGACCCTGAGCACTGGAAGCAGGGGAGAGAGCATGACTTGGGCCATTCAGTGCCTGATGTTTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS CCA 90 bp | CATGATGGCTGCAGCTGCCCGTGTCCGGCATGGGTACTGATCAATTaGGTAGGCTCTCATCTCAATGCTGGGGCAGAACCGGTACATGTA | + |
Preference number: 5 (lower is better) Translates to: HDGCSCPCPAWVLIN*VGSHLNAGAEPVHV Trigger: TACATGTACCGGTTCTGCCCCAGCATTGAGATGAGAGCCTACCCAATTGATCAGTACCCATGCCGGACACGGGCAGCTGCAGCCATCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 90 bp | GTTGCTGAACACTTGCCCGTTGCCTCCGTAGGTCACCAGCTCCTGTaGAAACTGGGCCACAGCAGGGTCCAAGTTGTTCATGATCATGTG | + |
Preference number: 5 (lower is better) Translates to: VAEHLPVASVGHQLL*KLGHSRVQVVHDHV Trigger: CACATGATCATGAACAACTTGGACCCTGCTGTGGCCCAGTTTCCACAGGAGCTGGTGACCTACGGAGGCAACGGGCAAGTGTTCAGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 90 bp | ATATTCGAAGTCTCCCTGAAGGGGCTGTCAGTGCCACTCACATCATaGTGGTCACGGCTCAGGACCACTGGTGCCTTGATCTTCCCACTG | + |
Preference number: 5 (lower is better) Translates to: IFEVSLKGLSVPLTS*WSRLRTTGALIFPL Trigger: CAGTGGGAAGATCAAGGCACCAGTGGTCCTGAGCCGTGACCACCATGATGTGAGTGGCACTGACAGCCCCTTCAGGGAGACTTCGAATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 90 bp | AGTCATGCTCTCTCCCCTGCTTCCAGTGCTCAGGGTCAAGTGTTCTaGGTCCCATACAGCCAAACCGTACCTGAGTCTTGCAATGCAGCG | + |
Preference number: 5 (lower is better) Translates to: SHALSPASSAQGQVF*VPYSQTVPESCNAA Trigger: CGCTGCATTGCAAGACTCAGGTACGGTTTGGCTGTATGGGACCCAGAACACTTGACCCTGAGCACTGGAAGCAGGGGAGAGAGCATGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | CTTGGCATTGTTGCCAGAGGCCCAAAGCAACACGACTTCCTTATCTTGCGTGGGCCAGTTGCTGAACACTaGCCCGTTGCCTCCGTAGGT | + |
Preference number: 5 (lower is better) Translates to: LGIVARGPKQHDFLILRGPVAEH*PVASVG Trigger: ACCTACGGAGGCAACGGGCAAGTGTTCAGCAACTGG...CCCACGCAAGATAAGGAAGTCGTGTTGCTTTGGGCCTCTGGCAACAATGCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | CTCTGCTATGGCTGCAGATGGGCTAAAGGCTTATTCCAAAGCTGTGCAGGGAGGCTCCATCAGCCAGCCTaGCCGGTGGCGTTTTACAAG | + |
Preference number: 5 (lower is better) Translates to: LCYGCRWAKGLFQSCAGRLHQPA*PVAFYK Trigger: CTTGTAAAACGCCACCGGCAAGGCTGGCTGATGGAG...CCTCCCTGCACAGCTTTGGAATAAGCCTTTAGCCCATCTGCAGCCATAGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 90 bp | TTCACTCCATCAGCAATGGCTTTCTCCAGTACAGATGTGGCCAGATaGTCAGTGACAGCCAGGTCCTGGGGGTCCCCTGATGTGCATACC | + |
Preference number: 5 (lower is better) Translates to: FTPSAMAFSSTDVAR*SVTARSWGSPDVHT Trigger: GGTATGCACATCAGGGGACCCCCAGGACCTGGCTGTCACTGATCATCTGGCCACATCTGTACTGGAGAAAGCCATTGCTGATGGAGTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 90 bp | TGCTCAGGGTCAAGTGTTCTGGGTCCCATACAGCCAAACCGTACCTaGGTCTTGCAATGCAGCGGTCCAAGCTGTCTGTCACCTCCATCA | + |
Preference number: 5 (lower is better) Translates to: CSGSSVLGPIQPNRT*VLQCSGPSCLSPPS Trigger: TGATGGAGGTGACAGACAGCTTGGACCGCTGCATTGCAAGACTCAGGTACGGTTTGGCTGTATGGGACCCAGAACACTTGACCCTGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS GCA 90 bp | GTCTGTCACCTCCATCAGCCAGCCTTGCCGGTGGCGTTTTACAAGTaGAGCTTTATCCACCTCCGCAATCACCCCAATGCATCCAACGAT | + |
Preference number: 5 (lower is better) Translates to: VCHLHQPALPVAFYK*SFIHLRNHPNASND Trigger: ATCGTTGGATGCATTGGGGTGATTGCGGAGGTGGATAAAGCTGCACTTGTAAAACGCCACCGGCAAGGCTGGCTGATGGAGGTGACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 90 bp | ATAGTCCCAGAAGAAGAACTTCTCTTGGGCCAACCTGTTGATGGCTaGGACATGCCTCCTCAGGCTTTCCTGCACCAGGTGCTTGAAGGC | + |
Preference number: 5 (lower is better) Translates to: IVPEEELLLGQPVDG*DMPPQAFLHQVLEG Trigger: GCCTTCAAGCACCTGGTGCAGGAAAGCCTGAGGAGGCATGTCGCAGCCATCAACAGGTTGGCCCAAGAGAAGTTCTTCTTCTGGGACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 90 bp | GCCACACCATTGGAGACATCCCAGCTGAGCATCATCCTGGCTTTCTaGTCAGCCTCTGCAGTTCCATCTAGAACAAGGCCAAATCCCCCA | + |
Preference number: 5 (lower is better) Translates to: ATPLETSQLSIILAF*SASAVPSRTRPNPP Trigger: TGGGGGATTTGGCCTTGTTCTAGATGGAACTGCAGAGGCTGAGCAGAAAGCCAGGATGATGCTCAGCTGGGATGTCTCCAATGGTGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 90 bp | TTGCTTCCCTGTGGTCAAACATCAGGCACTGAATGGCCCAAGTCATaGTCTCTCCCCTGCTTCCAGTGCTCAGGGTCAAGTGTTCTGGGT | + |
Preference number: 5 (lower is better) Translates to: LLPCGQTSGTEWPKS*SLPCFQCSGSSVLG Trigger: ACCCAGAACACTTGACCCTGAGCACTGGAAGCAGGGGAGAGAGCATGACTTGGGCCATTCAGTGCCTGATGTTTGACCACAGGGAAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS CCA 90 bp | GTTCATGATCATGTGCATGATGGCTGCAGCTGCCCGTGTCCGGCATaGGTACTGATCAATTGGGTAGGCTCTCATCTCAATGCTGGGGCA | + |
Preference number: 5 (lower is better) Translates to: VHDHVHDGCSCPCPA*VLINWVGSHLNAGA Trigger: TGCCCCAGCATTGAGATGAGAGCCTACCCAATTGATCAGTACCCATGCCGGACACGGGCAGCTGCAGCCATCATGCACATGATCATGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | AGGCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTACTCCATCAGCCAGCCTaGCCGGTGGCGTTTTACAAG | + |
Preference number: 5 (lower is better) Translates to: RLIPKLCREVRGPLEVELLHQPA*PVAFYK Trigger: CTTGTAAAACGCCACCGGCAAGGCTGGCTGATGGAG...TAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | CCTGTCTATCTTCCCCCATACTCCTCAGCACCAAGGACTTGGTGTGAGCACTTTTCTTGGGCCAACCTGTaGATGGCTGCGACATGCCTC | + |
Preference number: 5 (lower is better) Translates to: PVYLPPYSSAPRTWCEHFSWANL*MAATCL Trigger: GAGGCATGTCGCAGCCATCAACAGGTTGGCCCAAGA...AAAGTGCTCACACCAAGTCCTTGGTGCTGAGGAGTATGGGGGAAGATAGACAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | AGGGCTTTAGGCTACTGGAACACACCCTTGAAGGATTGGAGGACTTGGGTCCAAAGGACCACTGGTGCCTaGATCTTCCCACTGGCGATG | + |
Preference number: 5 (lower is better) Translates to: RALGYWNTPLKDWRTWVQRTTGA*IFPLAM Trigger: CATCGCCAGTGGGAAGATCAAGGCACCAGTGGTCCT...TTGGACCCAAGTCCTCCAATCCTTCAAGGGTGTGTTCCAGTAGCCTAAAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 90 bp | CATTACCATAGTCCCAGAAGAAGAACTTCTCTTGGGCCAACCTGTTaGTGGCTGCGACATGCCTCCTCAGGCTTTCCTGCACCAGGTGCT | + |
Preference number: 5 (lower is better) Translates to: HYHSPRRRTSLGPTC*WLRHASSGFPAPGA Trigger: AGCACCTGGTGCAGGAAAGCCTGAGGAGGCATGTCGCAGCCATCAACAGGTTGGCCCAAGAGAAGTTCTTCTTCTGGGACTATGGTAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 90 bp | AGCAGGGTCCAAGTTGTTCATGATCATGTGCATGATGGCTGCAGCTaGCCGTGTCCGGCATGGGTACTGATCAATTGGGTAGGCTCTCAT | + |
Preference number: 5 (lower is better) Translates to: SRVQVVHDHVHDGCS*PCPAWVLINWVGSH Trigger: ATGAGAGCCTACCCAATTGATCAGTACCCATGCCGGACACGGGCAGCTGCAGCCATCATGCACATGATCATGAACAACTTGGACCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | CCCAGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTCCAGTTGCTGAACACTaGCCCGTTGCCTCCGTAGGT | + |
Preference number: 5 (lower is better) Translates to: PRDLWKWLVLFFMVTQLPPVAEH*PVASVG Trigger: ACCTACGGAGGCAACGGGCAAGTGTTCAGCAACTGG...AGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | GCTCATAGTGTAATTTTGCTCTGCCATGTGCTCCCTGCCATTGCCACTTGGCATTCTTGGGCCAACCTGTaGATGGCTGCGACATGCCTC | + |
Preference number: 5 (lower is better) Translates to: AHSVILLCHVLPAIATWHSWANL*MAATCL Trigger: GAGGCATGTCGCAGCCATCAACAGGTTGGCCCAAGA...ATGCCAAGTGGCAATGGCAGGGAGCACATGGCAGAGCAAAATTACACTATGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | GCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGAGGCCAAATCCCCCATaGATGACTTCACCCCAGCCT | + |
Preference number: 5 (lower is better) Translates to: ASIQGSFLSKLESTLTGLRPNPP*MTSPQP Trigger: AGGCTGGGGTGAAGTCATCAATGGGGGATTTGGCCT...CAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 90 bp | CACGTTGCCATGGTAGCCGAGGCTGAGAACCTCCTTCTTTTTCCTTaGTTCCCTGTGGTCAAACATCAGGCACTGAATGGCCCAAGTCAT | + |
Preference number: 5 (lower is better) Translates to: HVAMVAEAENLLLFP*FPVVKHQALNGPSH Trigger: ATGACTTGGGCCATTCAGTGCCTGATGTTTGACCACAGGGAAGCAAGGAAAAAGAAGGAGGTTCTCAGCCTCGGCTACCATGGCAACGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | GCTTATTCCAAAGCTGTGCAGGGAGGTGAGGGGACCTTTAGAAGTGGAGCTAGGGAAGAAGAACTTCTCTaGGGCCAACCTGTTGATGGC | + |
Preference number: 5 (lower is better) Translates to: AYSKAVQGGEGTFRSGAREEELL*GQPVDG Trigger: GCCATCAACAGGTTGGCCCAAGAGAAGTTCTTCTTC...CCTAGCTCCACTTCTAAAGGTCCCCTCACCTCCCTGCACAGCTTTGGAATAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | GAATCTTGTGAGGCGGGTGCCAGCTTGGCCAGCATTCAAGGTTCCTTCCTATCCCGGAACTCCATCTTGTaGGCTCCTTTCTTCTCTACA | + |
Preference number: 5 (lower is better) Translates to: ESCEAGASLASIQGSFLSRNSIL*APFFST Trigger: TGTAGAGAAGAAAGGAGCCAACAAGATGGAGTTCCG...GGATAGGAAGGAACCTTGAATGCTGGCCAAGCTGGCACCCGCCTCACAAGATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | CCTGTCTATCTTCCCCCATACTCCTCAGCACCAAGGACTTGGTGTGAGCACTTTGAAGAAGAACTTCTCTaGGGCCAACCTGTTGATGGC | + |
Preference number: 5 (lower is better) Translates to: PVYLPPYSSAPRTWCEHFEEELL*GQPVDG Trigger: GCCATCAACAGGTTGGCCCAAGAGAAGTTCTTCTTC...AAAGTGCTCACACCAAGTCCTTGGTGCTGAGGAGTATGGGGGAAGATAGACAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | CTCTGCTATGGCTGCAGATGGGCTAAAGGCTTATTCCAAAGCTGTGCAGGGAGGCGGAACTCCATCTTGTaGGCTCCTTTCTTCTCTACA | + |
Preference number: 5 (lower is better) Translates to: LCYGCRWAKGLFQSCAGRRNSIL*APFFST Trigger: TGTAGAGAAGAAAGGAGCCAACAAGATGGAGTTCCG...CCTCCCTGCACAGCTTTGGAATAAGCCTTTAGCCCATCTGCAGCCATAGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 90 bp | GTGTCCGGCATGGGTACTGATCAATTGGGTAGGCTCTCATCTCAATaGTGGGGCAGAACCGGTACATGTAGATGTGTCCAAACTGTCTTA | + |
Preference number: 5 (lower is better) Translates to: VSGMGTDQLGRLSSQ*WGRTGTCRCVQTVL Trigger: TAAGACAGTTTGGACACATCTACATGTACCGGTTCTGCCCCAGCATTGAGATGAGAGCCTACCCAATTGATCAGTACCCATGCCGGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 90 bp | TCCGGCATGGGTACTGATCAATTGGGTAGGCTCTCATCTCAATGCTaGGGCAGAACCGGTACATGTAGATGTGTCCAAACTGTCTTAGCT | + |
Preference number: 5 (lower is better) Translates to: SGMGTDQLGRLSSQC*GRTGTCRCVQTVLA Trigger: AGCTAAGACAGTTTGGACACATCTACATGTACCGGTTCTGCCCCAGCATTGAGATGAGAGCCTACCCAATTGATCAGTACCCATGCCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | GCCAGCATTCAAGGTTCCTTCCTATCCAAGCTGGAGTCTACTCTTACAGGCCTGACAGCAGGGTCCAAGTaGTTCATGATCATGTGCATG | + |
Preference number: 5 (lower is better) Translates to: ASIQGSFLSKLESTLTGLTAGSK*FMIMCM Trigger: CATGCACATGATCATGAACAACTTGGACCCTGCTGT...CAGGCCTGTAAGAGTAGACTCCAGCTTGGATAGGAAGGAACCTTGAATGCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | CCCAGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTACAGCAGGGTCCAAGTaGTTCATGATCATGTGCATG | + |
Preference number: 5 (lower is better) Translates to: PRDLWKWLVLFFMVTQLPTAGSK*FMIMCM Trigger: CATGCACATGATCATGAACAACTTGGACCCTGCTGT...AGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS-3UTR CAA 90 bp | AGGGACCTCTGGAAGTGGTTGGTTCTGTTTTTCATGGTCACACAATTGCCTTTTAGGCCAAATCCCCCATaGATGACTTCACCCCAGCCT | + |
Preference number: 5 (lower is better) Translates to: RDLWKWLVLFFMVTQLPFRPNPP*MTSPQP Trigger: AGGCTGGGGTGAAGTCATCAATGGGGGATTTGGCCT...AAAAGGCAATTGTGTGACCATGAAAAACAGAACCAACCACTTCCAGAGGTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 72 bp | GTTGGGAATGACCATCCCGTTAGTGATGACCAGCCGTaGGGCACGGGGGCTGCTGGGGAAGAGGCCCAGAGG | + |
Preference number: 6 (lower is better) Translates to: VGNDHPVSDDQP*GTGAAGEEAQR Trigger: CCTCTGGGCCTCTTCCCCAGCAGCCCCCGTGCCCCACGGCTGGTCATCACTAACGGGATGGTCATTCCCAAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 72 bp | CAGATGATCAGTGACAGCCAGGTCCTGGGGGTCCCCTaGTGTGCATACCCAGCGGAAGGGCCCAAAGCCCTG | + |
Preference number: 6 (lower is better) Translates to: QMISDSQVLGVP*CAYPAEGPKAL Trigger: CAGGGCTTTGGGCCCTTCCGCTGGGTATGCACATCAGGGGACCCCCAGGACCTGGCTGTCACTGATCATCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 72 bp | CTCCGCAATCACCCCAATGCATCCAACGATGGCTGCTaGCTTGGCTTGAGCCCCACTCATCCCGCCAAGCCC | + |
Preference number: 6 (lower is better) Translates to: LRNHPNASNDGC*LGLSPTHPAKP Trigger: GGGCTTGGCGGGATGAGTGGGGCTCAAGCCAAGGCAGCAGCCATCGTTGGATGCATTGGGGTGATTGCGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 72 bp | TTCAGGGCTGAGGTTCGGAGTTCTAACCGGAGCATGTaGCACCCCAGCCCAGCGACCCCGGTTCTCAGGAAG | + |
Preference number: 6 (lower is better) Translates to: FRAEVRSSNRSM*HPSPATPVLRK Trigger: CTTCCTGAGAACCGGGGTCGCTGGGCTGGGGTGCCACATGCTCCGGTTAGAACTCCGAACCTCAGCCCTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CAA 72 bp | CATGGTCAGCCGGAACTGGGCCCAGTTGCTGAACACTaGCCCGTTGCCTCCGTAGGTCACCAGCTCCTGTGG | + |
Preference number: 6 (lower is better) Translates to: HGQPELGPVAEH*PVASVGHQLLW Trigger: CCACAGGAGCTGGTGACCTACGGAGGCAACGGGCAAGTGTTCAGCAACTGGGCCCAGTTCCGGCTGACCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CAA 72 bp | CACCCCAATGCATCCAACGATGGCTGCTGCCTTGGCTaGAGCCCCACTCATCCCGCCAAGCCCAGAGGTGAC | + |
Preference number: 6 (lower is better) Translates to: HPNASNDGCCLG*SPTHPAKPRGD Trigger: GTCACCTCTGGGCTTGGCGGGATGAGTGGGGCTCAAGCCAAGGCAGCAGCCATCGTTGGATGCATTGGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CAA 90 bp | CCACAGCAATGGCCACACGGCCTTTCTGGTCTGAGTACAGGATCCTaGCCTGGGAGCCCACCACCAGCTGATGCTTGGCAGCCTCTCGGA | + |
Preference number: 6 (lower is better) Translates to: PQQWPHGLSGLSTGS*PGSPPPADAWQPLG Trigger: TCCGAGAGGCTGCCAAGCATCAGCTGGTGGTGGGCTCCCAGGCAAGGATCCTGTACTCAGACCAGAAAGGCCGTGTGGCCATTGCTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 72 bp | ACCCCAATGCATCCAACGATGGCTGCTGCCTTGGCTTaGGCCCCACTCATCCCGCCAAGCCCAGAGGTGACA | + |
Preference number: 6 (lower is better) Translates to: TPMHPTMAAALA*APLIPPSPEVT Trigger: TGTCACCTCTGGGCTTGGCGGGATGAGTGGGGCTCAAGCCAAGGCAGCAGCCATCGTTGGATGCATTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 72 bp | CAGGTGGCACCACGACAGGCATCTCCCACGAAGTTCTaGACGGCCATGTCTGCGCAGAAGGCAGAACCGTCA | + |
Preference number: 6 (lower is better) Translates to: QVAPRQASPTKF*TAMSAQKAEPS Trigger: TGACGGTTCTGCCTTCTGCGCAGACATGGCCGTGCAGAACTTCGTGGGAGATGCCTGTCGTGGTGCCACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 72 bp | GACTTCACCCCAGCCTACACCCCCTCCATTGTGAAGTaGAACCCAGGTGGCACCACGACAGGCATCTCCCAC | + |
Preference number: 6 (lower is better) Translates to: DFTPAYTPSIVK*NPGGTTTGISH Trigger: GTGGGAGATGCCTGTCGTGGTGCCACCTGGGTTGCACTTCACAATGGAGGGGGTGTAGGCTGGGGTGAAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 72 bp | CAATCACCCCAATGCATCCAACGATGGCTGCTGCCTTaGCTTGAGCCCCACTCATCCCGCCAAGCCCAGAGG | + |
Preference number: 6 (lower is better) Translates to: QSPQCIQRWLLP*LEPHSSRQAQR Trigger: CCTCTGGGCTTGGCGGGATGAGTGGGGCTCAAGCCAAGGCAGCAGCCATCGTTGGATGCATTGGGGTGATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CAA 72 bp | TGGCCACACGGCCTTTCTGGTCTGAGTACAGGATCCTaGCCTGGGAGCCCACCACCAGCTGATGCTTGGCAG | + |
Preference number: 6 (lower is better) Translates to: WPHGLSGLSTGS*PGSPPPADAWQ Trigger: CTGCCAAGCATCAGCTGGTGGTGGGCTCCCAGGCAAGGATCCTGTACTCAGACCAGAAAGGCCGTGTGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CAA 90 bp | TGCCTCCTCAGGCTTTCCTGCACCAGGTGCTTGAAGGCAGCAGGGTaGGAGGACATGAGGCTCTGGGCCTCTGAGAAGCTGAGCTGCACA | + |
Preference number: 6 (lower is better) Translates to: CLLRLSCTRCLKAAG*EDMRLWASEKLSCT Trigger: TGTGCAGCTCAGCTTCTCAGAGGCCCAGAGCCTCATGTCCTCCAACCCTGCTGCCTTCAAGCACCTGGTGCAGGAAAGCCTGAGGAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 72 bp | TGGCTTGAGCCCCACTCATCCCGCCAAGCCCAGAGGTaGCAAAGACCTTCCCTGCCAAGTTCTCGATGCCCA | + |
Preference number: 6 (lower is better) Translates to: WLEPHSSRQAQR*QRPSLPSSRCP Trigger: TGGGCATCGAGAACTTGGCAGGGAAGGTCTTTGTCACCTCTGGGCTTGGCGGGATGAGTGGGGCTCAAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 72 bp | AATGGCCACAGCAATGGCCACACGGCCTTTCTGGTCTaGGTACAGGATCCTTGCCTGGGAGCCCACCACCAG | + |
Preference number: 6 (lower is better) Translates to: NGHSNGHTAFLV*VQDPCLGAHHQ Trigger: CTGGTGGTGGGCTCCCAGGCAAGGATCCTGTACTCAGACCAGAAAGGCCGTGTGGCCATTGCTGTGGCCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 72 bp | TATCCACCTCCGCAATCACCCCAATGCATCCAACGATaGCTGCTGCCTTGGCTTGAGCCCCACTCATCCCGC | + |
Preference number: 6 (lower is better) Translates to: YPPPQSPQCIQR*LLPWLEPHSSR Trigger: GCGGGATGAGTGGGGCTCAAGCCAAGGCAGCAGCCATCGTTGGATGCATTGGGGTGATTGCGGAGGTGGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 72 bp | GTCTCCCTGAAGGGGCTGTCAGTGCCACTCACATCATaGTGGTCACGGCTCAGGACCACTGGTGCCTTGATC | + |
Preference number: 6 (lower is better) Translates to: VSLKGLSVPLTS*WSRLRTTGALI Trigger: GATCAAGGCACCAGTGGTCCTGAGCCGTGACCACCATGATGTGAGTGGCACTGACAGCCCCTTCAGGGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 72 bp | AGGGCCTGCTGTAGCACTTGTTCATCTGCCACCTCATaGGGAAGCGTCACCACCAGGCCACTGTTCTCCTGC | + |
Preference number: 6 (lower is better) Translates to: RACCSTCSSATS*GSVTTRPLFSC Trigger: GCAGGAGAACAGTGGCCTGGTGGTGACGCTTCCCCATGAGGTGGCAGATGAACAAGTGCTACAGCAGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CAA 90 bp | CTCCGCAATCACCCCAATGCATCCAACGATGGCTGCTGCCTTGGCTaGAGCCCCACTCATCCCGCCAAGCCCAGAGGTGACAAAGACCTT | + |
Preference number: 6 (lower is better) Translates to: LRNHPNASNDGCCLG*SPTHPAKPRGDKDL Trigger: AAGGTCTTTGTCACCTCTGGGCTTGGCGGGATGAGTGGGGCTCAAGCCAAGGCAGCAGCCATCGTTGGATGCATTGGGGTGATTGCGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CAA 90 bp | GACAGGATGTCTGGTCTGACCCGAGGTCCACCAAGAGTTCCCCCGTaGTGTCCAGTTCATGGACAAGGCGCTCCCAAAGATCCACCACGT | + |
Preference number: 6 (lower is better) Translates to: DRMSGLTRGPPRVPP*CPVHGQGAPKDPPR Trigger: ACGTGGTGGATCTTTGGGAGCGCCTTGTCCATGAACTGGACACAACGGGGGAACTCTTGGTGGACCTCGGGTCAGACCAGACATCCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 72 bp | TCAGGCACTGAATGGCCCAAGTCATGCTCTCTCCCCTaGTTCCAGTGCTCAGGGTCAAGTGTTCTGGGTCCC | + |
Preference number: 6 (lower is better) Translates to: SGTEWPKSCSLP*FQCSGSSVLGP Trigger: GGGACCCAGAACACTTGACCCTGAGCACTGGAAGCAGGGGAGAGAGCATGACTTGGGCCATTCAGTGCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS CCA 72 bp | CACTTGCCCGTTGCCTCCGTAGGTCACCAGCTCCTGTaGAAACTGGGCCACAGCAGGGTCCAAGTTGTTCAT | + |
Preference number: 6 (lower is better) Translates to: HLPVASVGHQLL*KLGHSRVQVVH Trigger: ATGAACAACTTGGACCCTGCTGTGGCCCAGTTTCCACAGGAGCTGGTGACCTACGGAGGCAACGGGCAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 72 bp | TGGTTAATGGCCACAGCAATGGCCACACGGCCTTTCTaGTCTGAGTACAGGATCCTTGCCTGGGAGCCCACC | + |
Preference number: 6 (lower is better) Translates to: WLMATAMATRPF*SEYRILAWEPT Trigger: GGTGGGCTCCCAGGCAAGGATCCTGTACTCAGACCAGAAAGGCCGTGTGGCCATTGCTGTGGCCATTAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 72 bp | ACCACTGGTGCCTTGATCTTCCCACTGGCGATGGCCTaGTTAATGGCCACAGCAATGGCCACACGGCCTTTC | + |
Preference number: 6 (lower is better) Translates to: TTGALIFPLAMA*LMATAMATRPF Trigger: GAAAGGCCGTGTGGCCATTGCTGTGGCCATTAACCAGGCCATCGCCAGTGGGAAGATCAAGGCACCAGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 72 bp | AGCCTACACCCCCTCCATTGTGAAGTGCAACCCAGGTaGCACCACGACAGGCATCTCCCACGAAGTTCTGCA | + |
Preference number: 6 (lower is better) Translates to: SLHPLHCEVQPR*HHDRHLPRSSA Trigger: TGCAGAACTTCGTGGGAGATGCCTGTCGTGGTGCCACCTGGGTTGCACTTCACAATGGAGGGGGTGTAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 72 bp | TTGATGACTTCACCCCAGCCTACACCCCCTCCATTGTaGAGTGCAACCCAGGTGGCACCACGACAGGCATCT | + |
Preference number: 6 (lower is better) Translates to: LMTSPQPTPPPL*SATQVAPRQAS Trigger: AGATGCCTGTCGTGGTGCCACCTGGGTTGCACTTCACAATGGAGGGGGTGTAGGCTGGGGTGAAGTCATCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 72 bp | CCACCAGGCCACTGTTCTCCTGCATTGTCTGGCAGATaGTCTCATAGGCCTTGGGGTTTCCAGACCAGCAGC | + |
Preference number: 6 (lower is better) Translates to: PPGHCSPALSGR*SHRPWGFQTSS Trigger: GCTGCTGGTCTGGAAACCCCAAGGCCTATGAGATCATCTGCCAGACAATGCAGGAGAACAGTGGCCTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 72 bp | CAAGTGCAGCTTTATCCACCTCCGCAATCACCCCAATaGATCCAACGATGGCTGCTGCCTTGGCTTGAGCCC | + |
Preference number: 6 (lower is better) Translates to: QVQLYPPPQSPQ*IQRWLLPWLEP Trigger: GGGCTCAAGCCAAGGCAGCAGCCATCGTTGGATGCATTGGGGTGATTGCGGAGGTGGATAAAGCTGCACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 72 bp | GAATGGCCCAAGTCATGCTCTCTCCCCTGCTTCCAGTaGTCAGGGTCAAGTGTTCTGGGTCCCATACAGCCA | + |
Preference number: 6 (lower is better) Translates to: EWPKSCSLPCFQ*SGSSVLGPIQP Trigger: TGGCTGTATGGGACCCAGAACACTTGACCCTGAGCACTGGAAGCAGGGGAGAGAGCATGACTTGGGCCATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS CCA 72 bp | AGGTCCACCAAGAGTTCCCCCGTTGTGTCCAGTTCATaGACAAGGCGCTCCCAAAGATCCACCACGTTGCCA | + |
Preference number: 6 (lower is better) Translates to: RSTKSSPVVSSS*TRRSQRSTTLP Trigger: TGGCAACGTGGTGGATCTTTGGGAGCGCCTTGTCCATGAACTGGACACAACGGGGGAACTCTTGGTGGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 72 bp | CTCTCCCCTGCTTCCAGTGCTCAGGGTCAAGTGTTCTaGGTCCCATACAGCCAAACCGTACCTGAGTCTTGC | + |
Preference number: 6 (lower is better) Translates to: LSPASSAQGQVF*VPYSQTVPESC Trigger: GCAAGACTCAGGTACGGTTTGGCTGTATGGGACCCAGAACACTTGACCCTGAGCACTGGAAGCAGGGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS CAA 72 bp | TCTGGTCTGACCCGAGGTCCACCAAGAGTTCCCCCGTaGTGTCCAGTTCATGGACAAGGCGCTCCCAAAGAT | + |
Preference number: 6 (lower is better) Translates to: SGLTRGPPRVPP*CPVHGQGAPKD Trigger: ATCTTTGGGAGCGCCTTGTCCATGAACTGGACACAACGGGGGAACTCTTGGTGGACCTCGGGTCAGACCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CAA 72 bp | TTGGGGTTTCCAGACCAGCAGCGTCGTGCCACACCATaGGAGACATCCCAGCTGAGCATCATCCTGGCTTTC | + |
Preference number: 6 (lower is better) Translates to: LGFPDQQRRATP*ETSQLSIILAF Trigger: GAAAGCCAGGATGATGCTCAGCTGGGATGTCTCCAATGGTGTGGCACGACGCTGCTGGTCTGGAAACCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CAA 90 bp | TGCAATGCAGCGGTCCAAGCTGTCTGTCACCTCCATCAGCCAGCCTaGCCGGTGGCGTTTTACAAGTGCAGCTTTATCCACCTCCGCAAT | + |
Preference number: 6 (lower is better) Translates to: CNAAVQAVCHLHQPA*PVAFYKCSFIHLRN Trigger: ATTGCGGAGGTGGATAAAGCTGCACTTGTAAAACGCCACCGGCAAGGCTGGCTGATGGAGGTGACAGACAGCTTGGACCGCTGCATTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 72 bp | TGGCTTTCTCCAGTACAGATGTGGCCAGATGATCAGTaGCAGCCAGGTCCTGGGGGTCCCCTGATGTGCATA | + |
Preference number: 6 (lower is better) Translates to: WLSPVQMWPDDQ*QPGPGGPLMCI Trigger: TATGCACATCAGGGGACCCCCAGGACCTGGCTGTCACTGATCATCTGGCCACATCTGTACTGGAGAAAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 72 bp | TCAGCAATGGCTTTCTCCAGTACAGATGTGGCCAGATaGTCAGTGACAGCCAGGTCCTGGGGGTCCCCTGAT | + |
Preference number: 6 (lower is better) Translates to: SAMAFSSTDVAR*SVTARSWGSPD Trigger: ATCAGGGGACCCCCAGGACCTGGCTGTCACTGATCATCTGGCCACATCTGTACTGGAGAAAGCCATTGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 72 bp | CTCCATCAGCCAGCCTTGCCGGTGGCGTTTTACAAGTaGAGCTTTATCCACCTCCGCAATCACCCCAATGCA | + |
Preference number: 6 (lower is better) Translates to: LHQPALPVAFYK*SFIHLRNHPNA Trigger: TGCATTGGGGTGATTGCGGAGGTGGATAAAGCTGCACTTGTAAAACGCCACCGGCAAGGCTGGCTGATGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 72 bp | AACTTCTCTTGGGCCAACCTGTTGATGGCTGCGACATaGCTCCTCAGGCTTTCCTGCACCAGGTGCTTGAAG | + |
Preference number: 6 (lower is better) Translates to: NFSWANLLMAAT*LLRLSCTRCLK Trigger: CTTCAAGCACCTGGTGCAGGAAAGCCTGAGGAGGCATGTCGCAGCCATCAACAGGTTGGCCCAAGAGAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 72 bp | AAGCTGTCTGTCACCTCCATCAGCCAGCCTTGCCGGTaGCGTTTTACAAGTGCAGCTTTATCCACCTCCGCA | + |
Preference number: 6 (lower is better) Translates to: KLSVTSISQPCR*RFTSAALSTSA Trigger: TGCGGAGGTGGATAAAGCTGCACTTGTAAAACGCCACCGGCAAGGCTGGCTGATGGAGGTGACAGACAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CAA 72 bp | AGCTCCTGTGGAAACTGGGCCACAGCAGGGTCCAAGTaGTTCATGATCATGTGCATGATGGCTGCAGCTGCC | + |
Preference number: 6 (lower is better) Translates to: SSCGNWATAGSK*FMIMCMMAAAA Trigger: GGCAGCTGCAGCCATCATGCACATGATCATGAACAACTTGGACCCTGCTGTGGCCCAGTTTCCACAGGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 72 bp | AGTCCCAGAAGAAGAACTTCTCTTGGGCCAACCTGTTaGTGGCTGCGACATGCCTCCTCAGGCTTTCCTGCA | + |
Preference number: 6 (lower is better) Translates to: SPRRRTSLGPTC*WLRHASSGFPA Trigger: TGCAGGAAAGCCTGAGGAGGCATGTCGCAGCCATCAACAGGTTGGCCCAAGAGAAGTTCTTCTTCTGGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 72 bp | TTCTGGGTCCCATACAGCCAAACCGTACCTGAGTCTTaGAATGCAGCGGTCCAAGCTGTCTGTCACCTCCAT | + |
Preference number: 6 (lower is better) Translates to: FWVPYSQTVPES*NAAVQAVCHLH Trigger: ATGGAGGTGACAGACAGCTTGGACCGCTGCATTGCAAGACTCAGGTACGGTTTGGCTGTATGGGACCCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS GCA 72 bp | TGTGGTCAAACATCAGGCACTGAATGGCCCAAGTCATaGTCTCTCCCCTGCTTCCAGTGCTCAGGGTCAAGT | + |
Preference number: 6 (lower is better) Translates to: CGQTSGTEWPKS*SLPCFQCSGSS Trigger: ACTTGACCCTGAGCACTGGAAGCAGGGGAGAGAGCATGACTTGGGCCATTCAGTGCCTGATGTTTGACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS CCA 72 bp | CATGTGCATGATGGCTGCAGCTGCCCGTGTCCGGCATaGGTACTGATCAATTGGGTAGGCTCTCATCTCAAT | + |
Preference number: 6 (lower is better) Translates to: HVHDGCSCPCPA*VLINWVGSHLN Trigger: ATTGAGATGAGAGCCTACCCAATTGATCAGTACCCATGCCGGACACGGGCAGCTGCAGCCATCATGCACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 72 bp | TCAAGTGTTCTGGGTCCCATACAGCCAAACCGTACCTaGGTCTTGCAATGCAGCGGTCCAAGCTGTCTGTCA | + |
Preference number: 6 (lower is better) Translates to: SSVLGPIQPNRT*VLQCSGPSCLS Trigger: TGACAGACAGCTTGGACCGCTGCATTGCAAGACTCAGGTACGGTTTGGCTGTATGGGACCCAGAACACTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS GCA 72 bp | AGGGTCCAAGTTGTTCATGATCATGTGCATGATGGCTaGAGCTGCCCGTGTCCGGCATGGGTACTGATCAAT | + |
Preference number: 6 (lower is better) Translates to: RVQVVHDHVHDG*SCPCPAWVLIN Trigger: ATTGATCAGTACCCATGCCGGACACGGGCAGCTGCAGCCATCATGCACATGATCATGAACAACTTGGACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 72 bp | ATGGTAGCCGAGGCTGAGAACCTCCTTCTTTTTCCTTaGTTCCCTGAGTCTTGCAATGCAGCGGTCCAAGCT | + |
Preference number: 6 (lower is better) Translates to: MVAEAENLLLFP*FPESCNAAVQA Trigger: AGCTTGGACCGCTGCATTGCAAGACTCAGGGAAGCAAGGAAAAAGAAGGAGGTTCTCAGCCTCGGCTACCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046128.12 |
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CDS CCA 72 bp | GCTGGACATAGGAGGGGTAGCGGAACTCCATCTTGTTaGCTCCTTTCTTCTCTACATCTGCTCCTGCTCTCT | + |
Preference number: 6 (lower is better) Translates to: AGHRRGSGTPSC*LLSSLHLLLLS Trigger: AGAGAGCAGGAGCAGATGTAGAGAAGAAAGGAGCCAACAAGATGGAGTTCCGCTACCCCTCCTATGTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CAA 90 bp | CTCCAAGAGGAAGGCATTACCATAGTCCCAGAAGAAGAACTTCTCTaGGGCCAACCTGTTGATGGCTGCGACATGCCTCCTCAGGCTTTC | + |
Preference number: 6 (lower is better) Translates to: LQEEGITIVPEEELL*GQPVDGCDMPPQAF Trigger: GAAAGCCTGAGGAGGCATGTCGCAGCCATCAACAGGTTGGCCCAAGAGAAGTTCTTCTTCTGGGACTATGGTAATGCCTTCCTCTTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS TCA 72 bp | TTTTTCCTTGCTTCCCTGTGGTCAAACATCAGGCACTaGATGGCCCAAGTCATGCTCTCTCCCCTGCTTCCA | + |
Preference number: 6 (lower is better) Translates to: FFLASLWSNIRH*MAQVMLSPLLP Trigger: TGGAAGCAGGGGAGAGAGCATGACTTGGGCCATTCAGTGCCTGATGTTTGACCACAGGGAAGCAAGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS GCA 72 bp | CAAGTTGTTCATGATCATGTGCATGATGGCTGCAGCTaGCCGTGTCCGGCATGGGTACTGATCAATTGGGTA | + |
Preference number: 6 (lower is better) Translates to: QVVHDHVHDGCS*PCPAWVLINWV Trigger: TACCCAATTGATCAGTACCCATGCCGGACACGGGCAGCTGCAGCCATCATGCACATGATCATGAACAACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 72 bp | ACAGGCATCTCCCACGAAGTTCTGCACGGCCATGTCTaGGCAGAAGGCAGAACCGTCATAAATATTCGAAGT | + |
Preference number: 6 (lower is better) Translates to: TGISHEVLHGHV*AEGRTVINIRS Trigger: ACTTCGAATATTTATGACGGTTCTGCCTTCTGCGCAGACATGGCCGTGCAGAACTTCGTGGGAGATGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 72 bp | ATGGTAGCCGAGGCTGAGAACCTCCTTCTTTTTCCTTaGTTCCCTGTGGTCAAACATCAGGCACTGAATGGC | + |
Preference number: 6 (lower is better) Translates to: MVAEAENLLLFP*FPVVKHQALNG Trigger: GCCATTCAGTGCCTGATGTTTGACCACAGGGAAGCAAGGAAAAAGAAGGAGGTTCTCAGCCTCGGCTACCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164761.6 |
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CDS CAA 72 bp | GAAGGCATTACCATAGTCCCAGAAGAAGAACTTCTCTaGGGCCAACCTGTTGATGGCTGCGACATGCCTCCT | + |
Preference number: 6 (lower is better) Translates to: EGITIVPEEELL*GQPVDGCDMPP Trigger: AGGAGGCATGTCGCAGCCATCAACAGGTTGGCCCAAGAGAAGTTCTTCTTCTGGGACTATGGTAATGCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS GCA 72 bp | ATGGGTACTGATCAATTGGGTAGGCTCTCATCTCAATaGTGGGGCAGAACCGGTACATGTAGATGTGTCCAA | + |
Preference number: 6 (lower is better) Translates to: MGTDQLGRLSSQ*WGRTGTCRCVQ Trigger: TTGGACACATCTACATGTACCGGTTCTGCCCCAGCATTGAGATGAGAGCCTACCCAATTGATCAGTACCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 72 bp | GGTACTGATCAATTGGGTAGGCTCTCATCTCAATGCTaGGGCAGAACCGGTACATGTAGATGTGTCCAAACT | + |
Preference number: 6 (lower is better) Translates to: GTDQLGRLSSQC*GRTGTCRCVQT Trigger: AGTTTGGACACATCTACATGTACCGGTTCTGCCCCAGCATTGAGATGAGAGCCTACCCAATTGATCAGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |
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CDS CCA 72 bp | ACTGTAGCTTCACAGATGCCTTCACTCCATCAGCAATaGCTTTCTCCAGTACAGATGTGGCCAGATGATCAG | + |
Preference number: 6 (lower is better) Translates to: TVASQMPSLHQQ*LSPVQMWPDDQ Trigger: CTGATCATCTGGCCACATCTGTACTGGAGAAAGCCATTGCTGATGGAGTGAAGGCATCTGTGAAGCTACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046128.12 ENSMUST00000164761.6 |