Pregenerated sensors for URM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069020Ensembl transcript IDs: ENSMUST00000091142.4
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGCAAGCAGCTGGGTCACCTGGGCACAGAGCCCCCTCTACTCCTaGCACAGCACAGGAACACCCTCCCCCACCTCAGCTGCTGGGAGG | + |
|
Preference number: 1 (lower is better) Translates to: VASSWVTWAQSPLYS*HSTGTPSPTSAAGR Trigger: CCTCCCAGCAGCTGAGGTGGGGGAGGGTGTTCCTGTGCTGTGTCAGGAGTAGAGGGGGCTCTGTGCCCAGGTGACCCAGCTGCTTGCCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CCA 90 bp | CAGCACAGGAACACCCTCCCCCACCTCAGCTGCTGGGAGGAGTGCTaGACTCAGGCGGCTGCTCTCTCTCTTCGCTCTCCCTGCTCACGT | + |
|
Preference number: 1 (lower is better) Translates to: QHRNTLPHLSCWEEC*TQAAALSLRSPCSR Trigger: ACGTGAGCAGGGAGAGCGAAGAGAGAGAGCAGCCGCCTGAGTCCAGCACTCCTCCCAGCAGCTGAGGTGGGGGAGGGTGTTCCTGTGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR GCA 90 bp | CCTCTACTCCTGACACAGCACAGGAACACCCTCCCCCACCTCAGCTaGTGGGAGGAGTGCTGGACTCAGGCGGCTGCTCTCTCTCTTCGC | + |
|
Preference number: 1 (lower is better) Translates to: PLLLTQHRNTLPHLS*WEECWTQAAALSLR Trigger: GCGAAGAGAGAGAGCAGCCGCCTGAGTCCAGCACTCCTCCCAGCAGCTGAGGTGGGGGAGGGTGTTCCTGTGCTGTGTCAGGAGTAGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CCA 90 bp | CTACTCCTGACACAGCACAGGAACACCCTCCCCCACCTCAGCTGCTaGGAGGAGTGCTGGACTCAGGCGGCTGCTCTCTCTCTTCGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: LLLTQHRNTLPHLSC*EECWTQAAALSLRS Trigger: AGAGCGAAGAGAGAGAGCAGCCGCCTGAGTCCAGCACTCCTCCCAGCAGCTGAGGTGGGGGAGGGTGTTCCTGTGCTGTGTCAGGAGTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR TCA 90 bp | AGGAAGCTCAGGGGTACAGCAGGGAAGGAGGCAGCCAAGGGGGACTaGGGACCTGGAAGCAGATCGAGGAGTGCTGTGGTTGTCCTGTGT | + |
|
Preference number: 1 (lower is better) Translates to: RKLRGTAGKEAAKGD*GPGSRSRSAVVVLC Trigger: ACACAGGACAACCACAGCACTCCTCGATCTGCTTCCAGGTCCTCAGTCCCCCTTGGCTGCCTCCTTCCCTGCTGTACCCCTGAGCTTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR GCA 90 bp | CAGCACACCCTCAGCTGCACTTGGACCCAACACTGGCTGCTACTATaGACACAAGCCCAAGGGTCTGTTGTGGGGCAGTGGCTGGGAACA | + |
|
Preference number: 1 (lower is better) Translates to: QHTLSCTWTQHWLLL*TQAQGSVVGQWLGT Trigger: TGTTCCCAGCCACTGCCCCACAACAGACCCTTGGGCTTGTGTGCATAGTAGCAGCCAGTGTTGGGTCCAAGTGCAGCTGAGGGTGTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR GCA 90 bp | CTGGACTCAGGCGGCTGCTCTCTCTCTTCGCTCTCCCTGCTCACGTaGCTTGCCCAGAAAGGCTCATTTTTAGCACCTGGCCTCTTTTCC | + |
|
Preference number: 1 (lower is better) Translates to: LDSGGCSLSSLSLLT*LAQKGSFLAPGLFS Trigger: GGAAAAGAGGCCAGGTGCTAAAAATGAGCCTTTCTGGGCAAGGCACGTGAGCAGGGAGAGCGAAGAGAGAGAGCAGCCGCCTGAGTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CCA 90 bp | CTTCCAGGCAACCACTCAGTGCTTAGATACACCAAGACACATGAGTaGCAAGCAGCTGGGTCACCTGGGCACAGAGCCCCCTCTACTCCT | + |
|
Preference number: 1 (lower is better) Translates to: LPGNHSVLRYTKTHE*QAAGSPGHRAPSTP Trigger: AGGAGTAGAGGGGGCTCTGTGCCCAGGTGACCCAGCTGCTTGCCACTCATGTGTCTTGGTGTATCTAAGCACTGAGTGGTTGCCTGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CCA 90 bp | TGGCTGCTACTATGCACACAAGCCCAAGGGTCTGTTGTGGGGCAGTaGCTGGGAACAGCTCACCAAGCAGACGTCAGAGAATGCTCTCCT | + |
|
Preference number: 1 (lower is better) Translates to: WLLLCTQAQGSVVGQ*LGTAHQADVRECSP Trigger: AGGAGAGCATTCTCTGACGTCTGCTTGGTGAGCTGTTCCCAGCCACTGCCCCACAACAGACCCTTGGGCTTGTGTGCATAGTAGCAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CCA 90 bp | CCCAACACTGGCTGCTACTATGCACACAAGCCCAAGGGTCTGTTGTaGGGCAGTGGCTGGGAACAGCTCACCAAGCAGACGTCAGAGAAT | + |
|
Preference number: 1 (lower is better) Translates to: PNTGCYYAHKPKGLL*GSGWEQLTKQTSEN Trigger: ATTCTCTGACGTCTGCTTGGTGAGCTGTTCCCAGCCACTGCCCCACAACAGACCCTTGGGCTTGTGTGCATAGTAGCAGCCAGTGTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR TCA 90 bp | TGGCTGGGAACAGCTCACCAAGCAGACGTCAGAGAATGCTCTCCTTaGGAGTCTGCTCTTCTCCACCCCCATCACTGGCCCACAGTATCA | + |
|
Preference number: 1 (lower is better) Translates to: WLGTAHQADVRECSP*ESALLHPHHWPTVS Trigger: TGATACTGTGGGCCAGTGATGGGGGTGGAGAAGAGCAGACTCTCAAGGAGAGCATTCTCTGACGTCTGCTTGGTGAGCTGTTCCCAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CCA 90 bp | GAGTCACCTGTCTCTGACCCCTTTCTGTTAGAGGACCAGAGTGAATaGGCAGTGGCACCACATGGGGAAAGCTGGTTTCCTCAGCCCATC | + |
|
Preference number: 1 (lower is better) Translates to: ESPVSDPFLLEDQSE*AVAPHGESWFPQPI Trigger: GATGGGCTGAGGAAACCAGCTTTCCCCATGTGGTGCCACTGCCCATTCACTCTGGTCCTCTAACAGAAAGGGGTCAGAGACAGGTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR TCA 90 bp | GGGAGGAGTTTCTCATCAGTTACTCCAGCCCATCTATCTTCCCCATaGAGATGTCTCAGGAACTGGAGTGCCTTCCAGGCAACCACTCAG | + |
|
Preference number: 1 (lower is better) Translates to: GRSFSSVTPAHLSSP*RCLRNWSAFQATTQ Trigger: CTGAGTGGTTGCCTGGAAGGCACTCCAGTTCCTGAGACATCTTCATGGGGAAGATAGATGGGCTGGAGTAACTGATGAGAAACTCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR GCA 90 bp | CAGAAGATAGAGGAAAGGGACACACACAGCCTTCTGCCCACTAGGTaGTGCACACCCAAATCCCACTTGTTTCAGGAAGCCTGGAGTTAC | + |
|
Preference number: 1 (lower is better) Translates to: QKIEERDTHSLLPTR*CTPKSHLFQEAWSY Trigger: GTAACTCCAGGCTTCCTGAAACAAGTGGGATTTGGGTGTGCAGCACCTAGTGGGCAGAAGGCTGTGTGTGTCCCTTTCCTCTATCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR GCA 90 bp | AACAGCTCACCAAGCAGACGTCAGAGAATGCTCTCCTTGAGAGTCTaGTCTTCTCCACCCCCATCACTGGCCCACAGTATCAAACACTCT | + |
|
Preference number: 1 (lower is better) Translates to: NSSPSRRQRMLSLRV*SSPPPSLAHSIKHS Trigger: AGAGTGTTTGATACTGTGGGCCAGTGATGGGGGTGGAGAAGAGCAGACTCTCAAGGAGAGCATTCTCTGACGTCTGCTTGGTGAGCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR GCA 90 bp | AAGATAGAGGAAAGGGACACACACAGCCTTCTGCCCACTAGGTGCTaGACACCCAAATCCCACTTGTTTCAGGAAGCCTGGAGTTACACA | + |
|
Preference number: 1 (lower is better) Translates to: KIEERDTHSLLPTRC*TPKSHLFQEAWSYT Trigger: TGTGTAACTCCAGGCTTCCTGAAACAAGTGGGATTTGGGTGTGCAGCACCTAGTGGGCAGAAGGCTGTGTGTGTCCCTTTCCTCTATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR TCA 90 bp | AGTCACTTAGTCTTTTTATTTGCCCGAGGCCAGCTGCTGCAGGCATaGAGTCTCCAGAAGATAGAGGAAAGGGACACACACAGCCTTCTG | + |
|
Preference number: 1 (lower is better) Translates to: SHLVFLFARGQLLQA*SLQKIEERDTHSLL Trigger: CAGAAGGCTGTGTGTGTCCCTTTCCTCTATCTTCTGGAGACTTCATGCCTGCAGCAGCTGGCCTCGGGCAAATAAAAAGACTAAGTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR GCA 90 bp | TCCAGCCCATCTATCTTCCCCATGAAGATGTCTCAGGAACTGGAGTaGCTTCCAGGCAACCACTCAGTGCTTAGATACACCAAGACACAT | + |
|
Preference number: 1 (lower is better) Translates to: SSPSIFPMKMSQELE*LPGNHSVLRYTKTH Trigger: ATGTGTCTTGGTGTATCTAAGCACTGAGTGGTTGCCTGGAAGGCACTCCAGTTCCTGAGACATCTTCATGGGGAAGATAGATGGGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR GCA 90 bp | TCTCCACCCCCATCACTGGCCCACAGTATCAAACACTCTCATCTATaGAAGGTAAAGGAGTCCACCTCATTGCCATGTAGTGAAAAGCAA | + |
|
Preference number: 1 (lower is better) Translates to: SPPPSLAHSIKHSHL*KVKESTSLPCSEKQ Trigger: TTGCTTTTCACTACATGGCAATGAGGTGGACTCCTTTACCTTGCATAGATGAGAGTGTTTGATACTGTGGGCCAGTGATGGGGGTGGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCTGCTGGGAGGAGTGCTGGACTCAGGCGGCTGCTCTCTCTCTTCGCTCTCGGGGGACTGAGGACCTaGAAGCAGATCGAGGAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: SAAGRSAGLRRLLSLFALGGLRT*KQIEEC Trigger: GCACTCCTCGATCTGCTTCCAGGTCCTCAGTCCCCC...GAGAGCGAAGAGAGAGAGCAGCCGCCTGAGTCCAGCACTCCTCCCAGCAGCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CAA 90 bp | GGACCCAACACTGGCTGCTACTATGCACACAAGCCCAAGGGTCTGTaGTGGGGCAGTGGCTGGGAACAGCTCACCAAGCAGACGTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GPNTGCYYAHKPKGL*WGSGWEQLTKQTSE Trigger: CTCTGACGTCTGCTTGGTGAGCTGTTCCCAGCCACTGCCCCACAACAGACCCTTGGGCTTGTGTGCATAGTAGCAGCCAGTGTTGGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGGTGCCATAAAAGCAAGAGGTCCCTACCCACACCCTCCCACCCATCAGCTTGTCCTGTGTTCCCCTaGAAAGGTGCTTGGGCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LGCHKSKRSLPTPSHPSACPVFP*KGAWAH Trigger: GTGGGCCCAAGCACCTTTGCAGGGGAACACAGGACA...AGCTGATGGGTGGGAGGGTGTGGGTAGGGACCTCTTGCTTTTATGGCACCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CAA 90 bp | GTGGCTGGGAACAGCTCACCAAGCAGACGTCAGAGAATGCTCTCCTaGAGAGTCTGCTCTTCTCCACCCCCATCACTGGCCCACAGTATC | + |
|
Preference number: 2 (lower is better) Translates to: VAGNSSPSRRQRMLS*RVCSSPPPSLAHSI Trigger: GATACTGTGGGCCAGTGATGGGGGTGGAGAAGAGCAGACTCTCAAGGAGAGCATTCTCTGACGTCTGCTTGGTGAGCTGTTCCCAGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGGTCTGTTGTGGGGCAGTGGCTGGGAACAGCTCACCAAGCAGACGTCAGACTCCACCCCCATCACTaGCCCACAGTATCAAACACT | + |
|
Preference number: 2 (lower is better) Translates to: QGSVVGQWLGTAHQADVRLHPHH*PTVSNT Trigger: AGTGTTTGATACTGTGGGCCAGTGATGGGGGTGGAG...TCTGACGTCTGCTTGGTGAGCTGTTCCCAGCCACTGCCCCACAACAGACCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTACTATGCACACAAGCCCAAGGGTCTGTTGTGGGGCAGTGGCTGGGAACATCTGGGACTGGTGACTaGAGTTGGCAGAACAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LLLCTQAQGSVVGQWLGTSGTGD*SWQNKA Trigger: GGCTTTGTTCTGCCAACTGCAGTCACCAGTCCCAGA...TGTTCCCAGCCACTGCCCCACAACAGACCCTTGGGCTTGTGTGCATAGTAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR GCA 90 bp | GCTCTTCTCCACCCCCATCACTGGCCCACAGTATCAAACACTCTCATCTATGCACTGGCCTCTTTTCCCTaGCTAGAGGAAGCTCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: ALLHPHHWPTVSNTLIYALASFP*LEEAQG Trigger: CCCCTGAGCTTCCTCTAGGCAGGGAAAAGAGGCCAG...TGCATAGATGAGAGTGTTTGATACTGTGGGCCAGTGATGGGGGTGGAGAAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR CCA 90 bp | GTTGGCAGAACAAAGCCTAGCTTGGACTGGTTGGTGAGAAATCCTGGCTTAGAAAGCAGCTGGGTCACCTaGGCACAGAGCCCCCTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: VGRTKPSLDWLVRNPGLESSWVT*AQSPLY Trigger: GTAGAGGGGGCTCTGTGCCCAGGTGACCCAGCTGCT...TTCTAAGCCAGGATTTCTCACCAACCAGTCCAAGCTAGGCTTTGTTCTGCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCACCAAGCAGACGTCAGAGAATGCTCTCCTTGAGAGTCTGCTCTTCTCCACAGCTGCTGCAGGCATaGAGTCTCCAGAAGATAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SSPSRRQRMLSLRVCSSPQLLQA*SLQKIE Trigger: CTCTATCTTCTGGAGACTTCATGCCTGCAGCAGCTG...TGGAGAAGAGCAGACTCTCAAGGAGAGCATTCTCTGACGTCTGCTTGGTGAGCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTACTATGCACACAAGCCCAAGGGTCTGTTGTGGGGCAGTGGCTGGGAACATTTTTACCTTTCAGGTaGAGGCCATCTCTGAACCCT | + |
|
Preference number: 2 (lower is better) Translates to: LLLCTQAQGSVVGQWLGTFLPFR*RPSLNP Trigger: AGGGTTCAGAGATGGCCTTCACCTGAAAGGTAAAAA...TGTTCCCAGCCACTGCCCCACAACAGACCCTTGGGCTTGTGTGCATAGTAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR GCA 90 bp | AAGGCTAGTAAACAACCTAGTCACTTAGTCTTTTTATTTGCCCGAGGCCAGCTGGTTCCCCTGCAAAGGTaGTTGGGCCCACTGGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KASKQPSHLVFLFARGQLVPLQR*LGPLGR Trigger: CCTCCCCAGTGGGCCCAAGCACCTTTGCAGGGGAAC...CAGCTGGCCTCGGGCAAATAAAAAGACTAAGTGACTAGGTTGTTTACTAGCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR GCA 90 bp | GTTGGCAGAACAAAGCCTAGCTTGGACTGGTTGGTGAGAAATCCTGGCTTAGAACTTAGTCTTTTTATTTaGCCGAGGCCAGCTGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VGRTKPSLDWLVRNPGLELSLFI*PRPAAA Trigger: TGCAGCAGCTGGCCTCGGGCAAATAAAAAGACTAAG...TTCTAAGCCAGGATTTCTCACCAACCAGTCCAAGCTAGGCTTTGTTCTGCCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCTTTTTCTGCAGGTTGTGGAAGTAATGAGACTCAGCAGGCTTACTTAGGCCCTGCTCACGTGCCTTaGCCAGAAAGGCTCATTTTT | + |
|
Preference number: 2 (lower is better) Translates to: KAFSAGCGSNETQQAYLGPAHVP*PERLIF Trigger: AAAAATGAGCCTTTCTGGGCAAGGCACGTGAGCAGG...GCCTAAGTAAGCCTGCTGAGTCTCATTACTTCCACAACCTGCAGAAAAAGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR TCA 90 bp | AAAGCTTTTTCTGCAGGTTGTGGAAGTAATGAGACTCAGCAGGCTTACTTAGGCCATCTATCTTCCCCATaGAGATGTCTCAGGAACTGG | + |
|
Preference number: 2 (lower is better) Translates to: KAFSAGCGSNETQQAYLGHLSSP*RCLRNW Trigger: CCAGTTCCTGAGACATCTTCATGGGGAAGATAGATG...GCCTAAGTAAGCCTGCTGAGTCTCATTACTTCCACAACCTGCAGAAAAAGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR TCA 72 bp | AGCTGGGTCACCTGGGCACAGAGCCCCCTCTACTCCTaGCACAGCACAGGAACACCCTCCCCCACCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SWVTWAQSPLYS*HSTGTPSPTSA Trigger: AGCTGAGGTGGGGGAGGGTGTTCCTGTGCTGTGTCAGGAGTAGAGGGGGCTCTGTGCCCAGGTGACCCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR GCA 72 bp | CCTCAGCTGCTGGGAGGAGTGCTGGACTCAGGCGGCTaGTCTCTCTCTTCGCTCTCCCTGCTCACGTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PQLLGGVLDSGG*SLSSLSLLTCL Trigger: AAGGCACGTGAGCAGGGAGAGCGAAGAGAGAGAGCAGCCGCCTGAGTCCAGCACTCCTCCCAGCAGCTGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR TCA 72 bp | AGGGGTACAGCAGGGAAGGAGGCAGCCAAGGGGGACTaGGGACCTGGAAGCAGATCGAGGAGTGCTGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RGTAGKEAAKGD*GPGSRSRSAVV Trigger: AACCACAGCACTCCTCGATCTGCTTCCAGGTCCTCAGTCCCCCTTGGCTGCCTCCTTCCCTGCTGTACCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR GCA 72 bp | GGCGGCTGCTCTCTCTCTTCGCTCTCCCTGCTCACGTaGCTTGCCCAGAAAGGCTCATTTTTAGCACCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GGCSLSSLSLLT*LAQKGSFLAPG Trigger: GCCAGGTGCTAAAAATGAGCCTTTCTGGGCAAGGCACGTGAGCAGGGAGAGCGAAGAGAGAGAGCAGCCGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR GCA 72 bp | ATGCTGAGGCCCCGCCCCCTCTGCCTACGGTTAGGCTaGTCCCTTCCATTCTCTACCCGCAACAGAATGAGT | + |
|
Preference number: 3 (lower is better) Translates to: MLRPRPLCLRLG*SLPFSTRNRMS Trigger: ACTCATTCTGTTGCGGGTAGAGAATGGAAGGGAGCAGCCTAACCGTAGGCAGAGGGGGCGGGGCCTCAGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CCA 72 bp | GGCTGCTACTATGCACACAAGCCCAAGGGTCTGTTGTaGGGCAGTGGCTGGGAACAGCTCACCAAGCAGACG | + |
|
Preference number: 3 (lower is better) Translates to: GCYYAHKPKGLL*GSGWEQLTKQT Trigger: CGTCTGCTTGGTGAGCTGTTCCCAGCCACTGCCCCACAACAGACCCTTGGGCTTGTGTGCATAGTAGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR GCA 72 bp | CAAGGGGGACTGAGGACCTGGAAGCAGATCGAGGAGTaGTGTGGTTGTCCTGTGTTCCCCTGCAAAGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QGGLRTWKQIEE*CGCPVFPCKGA Trigger: AGCACCTTTGCAGGGGAACACAGGACAACCACAGCACTCCTCGATCTGCTTCCAGGTCCTCAGTCCCCCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR GCA 72 bp | CTCAGCTGCACTTGGACCCAACACTGGCTGCTACTATaGACACAAGCCCAAGGGTCTGTTGTGGGGCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LSCTWTQHWLLL*TQAQGSVVGQW Trigger: CCACTGCCCCACAACAGACCCTTGGGCTTGTGTGCATAGTAGCAGCCAGTGTTGGGTCCAAGTGCAGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAAAGGGACACACACAGCCTTCTGCCCACTAGGTGCTGCACACCCAAATCCCCCTGCTCACGTGCCTaGCCCAGAAAGGCTCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: EERDTHSLLPTRCCTPKSPCSRA*PRKAHF Trigger: AAAATGAGCCTTTCTGGGCAAGGCACGTGAGCAGGG...GGATTTGGGTGTGCAGCACCTAGTGGGCAGAAGGCTGTGTGTGTCCCTTTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR TCA 72 bp | GGACAAGCAGAGCTCTCTGTGTCCAGATGGGGAAACTaGGGCGGAGGCCCTTCTAATCTTTGGCAAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GQAELSVSRWGN*GGGPSNLWQGR Trigger: CCTCCCTTGCCAAAGATTAGAAGGGCCTCCGCCTCAGTTTCCCCATCTGGACACAGAGAGCTCTGCTTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR TCA 72 bp | ACAGCTCACCAAGCAGACGTCAGAGAATGCTCTCCTTaGGAGTCTGCTCTTCTCCACCCCCATCACTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: TAHQADVRECSP*ESALLHPHHWP Trigger: GGGCCAGTGATGGGGGTGGAGAAGAGCAGACTCTCAAGGAGAGCATTCTCTGACGTCTGCTTGGTGAGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CCA 72 bp | AACCACTCAGTGCTTAGATACACCAAGACACATGAGTaGCAAGCAGCTGGGTCACCTGGGCACAGAGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: NHSVLRYTKTHE*QAAGSPGHRAP Trigger: GGGGGCTCTGTGCCCAGGTGACCCAGCTGCTTGCCACTCATGTGTCTTGGTGTATCTAAGCACTGAGTGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CCA 72 bp | CTATGCACACAAGCCCAAGGGTCTGTTGTGGGGCAGTaGCTGGGAACAGCTCACCAAGCAGACGTCAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LCTQAQGSVVGQ*LGTAHQADVRE Trigger: TTCTCTGACGTCTGCTTGGTGAGCTGTTCCCAGCCACTGCCCCACAACAGACCCTTGGGCTTGTGTGCATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR GCA 72 bp | GAGGAAAGGGACACACACAGCCTTCTGCCCACTAGGTaGTGCACACCCAAATCCCACTTGTTTCAGGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EERDTHSLLPTR*CTPKSHLFQEA Trigger: GGCTTCCTGAAACAAGTGGGATTTGGGTGTGCAGCACCTAGTGGGCAGAAGGCTGTGTGTGTCCCTTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR GCA 72 bp | CCAAGCAGACGTCAGAGAATGCTCTCCTTGAGAGTCTaGTCTTCTCCACCCCCATCACTGGCCCACAGTATC | + |
|
Preference number: 3 (lower is better) Translates to: PSRRQRMLSLRV*SSPPPSLAHSI Trigger: GATACTGTGGGCCAGTGATGGGGGTGGAGAAGAGCAGACTCTCAAGGAGAGCATTCTCTGACGTCTGCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CCA 72 bp | GTCTCTGACCCCTTTCTGTTAGAGGACCAGAGTGAATaGGCAGTGGCACCACATGGGGAAAGCTGGTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VSDPFLLEDQSE*AVAPHGESWFP Trigger: AGGAAACCAGCTTTCCCCATGTGGTGCCACTGCCCATTCACTCTGGTCCTCTAACAGAAAGGGGTCAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAGCCTAGCTTGGACTGGTTGGTGAGAAATCCTGGCTTAGAATGTGGGCTGCGAGGAGTGCTGTGGTaGTCCTGTGTTCCCCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: TKPSLDWLVRNPGLECGLRGVLW*SCVPLQ Trigger: TTGCAGGGGAACACAGGACAACCACAGCACTCCTCG...CAGCCCACATTCTAAGCCAGGATTTCTCACCAACCAGTCCAAGCTAGGCTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGGTCTGTTGTGGGGCAGTGGCTGGGAACAGCTCACCAAGCAGACGTCAGAAAGGAGTCCACCTCATaGCCATGTAGTGAAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: QGSVVGQWLGTAHQADVRKESTS*PCSEKQ Trigger: TTGCTTTTCACTACATGGCAATGAGGTGGACTCCTT...TCTGACGTCTGCTTGGTGAGCTGTTCCCAGCCACTGCCCCACAACAGACCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CCA 72 bp | CTTGGACTGGTTGGTGAGAAATCCTGGCTTAGAATGTaGGCTGGTCATCACGGGCTTACACTCCCTTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LGLVGEKSWLRM*AGHHGLTLPSH Trigger: ATGGGAAGGGAGTGTAAGCCCGTGATGACCAGCCCACATTCTAAGCCAGGATTTCTCACCAACCAGTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAGCCTAGCTTGGACTGGTTGGTGAGAAATCCTGGCTTAGAATGTGGGCTGGCCATCTCTGAACCCTaGGCTCAGAACAGGGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: TKPSLDWLVRNPGLECGLAISEP*AQNRAF Trigger: AAATGCCCTGTTCTGAGCCAAGGGTTCAGAGATGGC...CAGCCCACATTCTAAGCCAGGATTTCTCACCAACCAGTCCAAGCTAGGCTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR TCA 72 bp | GTCTTTTTATTTGCCCGAGGCCAGCTGCTGCAGGCATaGAGTCTCCAGAAGATAGAGGAAAGGGACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: VFLFARGQLLQA*SLQKIEERDTH Trigger: GTGTGTGTCCCTTTCCTCTATCTTCTGGAGACTTCATGCCTGCAGCAGCTGGCCTCGGGCAAATAAAAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR TCA 72 bp | TTCTCATCAGTTACTCCAGCCCATCTATCTTCCCCATaGAGATGTCTCAGGAACTGGAGTGCCTTCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: FSSVTPAHLSSP*RCLRNWSAFQA Trigger: TGCCTGGAAGGCACTCCAGTTCCTGAGACATCTTCATGGGGAAGATAGATGGGCTGGAGTAACTGATGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAGCAGACGTCAGAGAATGCTCTCCTTGAGAGTCTGCTCTTCTCCACCCCCTCATCCACCCTCTCTTaGGAACAGTTCATGTTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: TKQTSENALLESLLFSTPSSTLS*EQFMFL Trigger: TAAAAACATGAACTGTTCCAAAGAGAGGGTGGATGA...GGGGGTGGAGAAGAGCAGACTCTCAAGGAGAGCATTCTCTGACGTCTGCTTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CAA 72 bp | ACTGGCTGCTACTATGCACACAAGCCCAAGGGTCTGTaGTGGGGCAGTGGCTGGGAACAGCTCACCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGCYYAHKPKGL*WGSGWEQLTKQ Trigger: CTGCTTGGTGAGCTGTTCCCAGCCACTGCCCCACAACAGACCCTTGGGCTTGTGTGCATAGTAGCAGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| CDS-3UTR GCA 90 bp | CTGCTACTATGCACACAAGCCCAAGGGTCTGTTGTGGGGCAGTGGCTGGGAACAATCAAACAGGAGCTCTaGACCACCTCCGAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCTQAQGSVVGQWLGTIKQEL*TTSELH Trigger: GTGGAGTTCGGAGGTGGTGCAGAGCTCCTGTTTGAT...TGTTCCCAGCCACTGCCCCACAACAGACCCTTGGGCTTGTGTGCATAGTAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| CDS-3UTR TCA 90 bp | TGCACTTGGACCCAACACTGGCTGCTACTATGCACACAAGCCCAAGGGTCTGTTCACTGTCTCCCTGGATaGACAGCTCTGGTCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CTWTQHWLLLCTQAQGSVHCLPG*TALVAL Trigger: AAGAGCGACCAGAGCTGTTCATCCAGGGAGACAGTG...AACAGACCCTTGGGCTTGTGTGCATAGTAGCAGCCAGTGTTGGGTCCAAGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| CDS-3UTR TCA 90 bp | CAGATCGAGGAGTGCTGTGGTTGTCCTGTGTTCCCCTGCAAAGGTGCTTGGGCCTTAGCAAATTCTTCTTaGTCCAGACAAGGAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QIEECCGCPVFPCKGAWALANSS*SRQGGS Trigger: GGAACCTCCTTGTCTGGATCAAGAAGAATTTGCTAA...GGCCCAAGCACCTTTGCAGGGGAACACAGGACAACCACAGCACTCCTCGATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CAA 72 bp | GGACTGGTGACTGCAGTTGGCAGAACAAAGCCTAGCTaGGACTGGTTGGTGAGAAATCCTGGCTTAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: GLVTAVGRTKPS*DWLVRNPGLEC Trigger: ACATTCTAAGCCAGGATTTCTCACCAACCAGTCCAAGCTAGGCTTTGTTCTGCCAACTGCAGTCACCAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| 3UTR CAA 72 bp | CACTCTCATCTATGCAAGGTAAAGGAGTCCACCTCATaGCCATGTAGTGAAAAGCAACATTTTGGGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HSHLCKVKESTS*PCSEKQHFGSD Trigger: ATCTGACCCAAAATGTTGCTTTTCACTACATGGCAATGAGGTGGACTCCTTTACCTTGCATAGATGAGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| CDS-3UTR CAA 90 bp | GTTGGCAGAACAAAGCCTAGCTTGGACTGGTTGGTGAGAAATCCTGGCTTAGAATTTAGCAAATTCTTCTaGATCCAGACAAGGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGRTKPSLDWLVRNPGLEFSKFF*IQTRRF Trigger: GAACCTCCTTGTCTGGATCAAGAAGAATTTGCTAAA...TTCTAAGCCAGGATTTCTCACCAACCAGTCCAAGCTAGGCTTTGTTCTGCCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| CDS TCA 72 bp | GCACCAGGATTCCTGGCCGCACACTGTCTCCCTGGATaGACAGCTCTGGTCGCTCTTTTAGCAAATTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: APGFLAAHCLPG*TALVALLANSS Trigger: AGAAGAATTTGCTAAAAGAGCGACCAGAGCTGTTCATCCAGGGAGACAGTGTGCGGCCAGGAATCCTGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| CDS CCA 72 bp | ATCAGCACCAGGATTCCTGGCCGCACACTGTCTCCCTaGATGAACAGCTCTGGTCGCTCTTTTAGCAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: ISTRIPGRTLSP*MNSSGRSFSKF Trigger: GAATTTGCTAAAAGAGCGACCAGAGCTGTTCATCCAGGGAGACAGTGTGCGGCCAGGAATCCTGGTGCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| CDS CAA 90 bp | TCTCCCTGGATGAACAGCTCTGGTCGCTCTTTTAGCAAATTCTTCTaGATCCAGACAAGGAGGTTCCGTATATCCCAGGGTTCCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPWMNSSGRSFSKFF*IQTRRFRISQGSSC Trigger: GCAGGAGGAACCCTGGGATATACGGAACCTCCTTGTCTGGATCAAGAAGAATTTGCTAAAAGAGCGACCAGAGCTGTTCATCCAGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||
| CDS CAA 72 bp | ATGAACAGCTCTGGTCGCTCTTTTAGCAAATTCTTCTaGATCCAGACAAGGAGGTTCCGTATATCCCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: MNSSGRSFSKFF*IQTRRFRISQG Trigger: ACCCTGGGATATACGGAACCTCCTTGTCTGGATCAAGAAGAATTTGCTAAAAGAGCGACCAGAGCTGTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091142.4 |
||