Pregenerated sensors for URI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030421Ensembl transcript IDs: ENSMUST00000085513.6, ENSMUST00000205918.2, ENSMUST00000206169.2, ENSMUST00000206327.2, ENSMUST00000206581.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTACTTTGACTTTCCCAATGCCACTGATAAAGGTGAGAGAGCTCTaGCCAGCCAAGCAGGACGCCGTCCCAACTCCATGGCCGAATCCG | + |
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Preference number: 1 (lower is better) Translates to: FTLTFPMPLIKVREL*PAKQDAVPTPWPNP Trigger: CGGATTCGGCCATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGGAAAGTCAAAGTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| 3UTR GCA 90 bp | AACATGGTCCATATGGAAAGCACAACATCACAGCTGGTACGAAACTaGCTGTGTTTAGTTGAAAACACACAAACAATATATGACAGGATT | + |
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Preference number: 1 (lower is better) Translates to: NMVHMESTTSQLVRN*LCLVENTQTIYDRI Trigger: AATCCTGTCATATATTGTTTGTGTGTTTTCAACTAAACACAGGCAGTTTCGTACCAGCTGTGATGTTGTGCTTTCCATATGGACCATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
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| 3UTR-3UTR CCA 90 bp | GACTTTCCCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGAGTCCTAAAGCGCAGCTaGAGCTGCAGGCGGAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: DFPNATDKGERALPSQAGVLKRS*SCRRSP Trigger: AGGGCTCCGCCTGCAGCTCCAGCTGCGCTTTAGGAC...TCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGGAAAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTTTCCGATGCTCAACTAAACCCACAGCCTGCTTGGCTGAGCACTTTGCACTAGTTTTCCTGGCATaGAGGCAAGAGGGCCGAATG | + |
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Preference number: 2 (lower is better) Translates to: CSFRCSTKPTACLAEHFALVFLA*RQEGRM Trigger: CATTCGGCCCTCTTGCCTTCATGCCAGGAAAACTAG...TGCAAAGTGCTCAGCCAAGCAGGCTGTGGGTTTAGTTGAGCATCGGAAAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206169.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTAGTCAAATTTTCCCAAAGGGTTTGTGTAGCTTTTTGCCTTAAAGATTACGTCCTAAAGCGCAGCTaGAGCTGCAGGCGGAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LLVKFSQRVCVAFCLKDYVLKRS*SCRRSP Trigger: AGGGCTCCGCCTGCAGCTCCAGCTGCGCTTTAGGAC...GTAATCTTTAAGGCAAAAAGCTACACAAACCCTTTGGGAAAATTTGACTAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
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| 3UTR CAA 90 bp | TCAACTAAACCCACAGCCTGCTTGGCTGAGCACTTTGCAAACCAGTaGTCGCCAAGTAAAACAGTGACTTCATTAGTGTGGACTAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: STKPTACLAEHFANQ*SPSKTVTSLVWTSF Trigger: AAAACTAGTCCACACTAATGAAGTCACTGTTTTACTTGGCGACAACTGGTTTGCAAAGTGCTCAGCCAAGCAGGCTGTGGGTTTAGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206169.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTACATGTTCTTTCCGATGCTCAACTAAACCCACAGCCTGCTTGGCTGAGGTGACTTCATTAGTGTaGACTAGTTTTCCTGGCATG | + |
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Preference number: 2 (lower is better) Translates to: FLTCSFRCSTKPTACLAEVTSLV*TSFPGM Trigger: CATGCCAGGAAAACTAGTCCACACTAATGAAGTCAC...CTCAGCCAAGCAGGCTGTGGGTTTAGTTGAGCATCGGAAAGAACATGTAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206169.2 |
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| 3UTR CAA 90 bp | GAATTAACGAAGCCAGCAGAACATTACAGCATTCAAACATTTACTTaGACTTTCCCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: ELTKPAEHYSIQTFT*TFPMPLIKVRELCP Trigger: TGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGGAAAGTCAAAGTAAATGTTTGAATGCTGTAATGTTCTGCTGGCTTCGTTAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTGTTTAATAACAGCACACTTAAGTTACACATCTGAAGATCCAACAGTTCCAAAAGAATGGTGCCAATaGCAACTGTGTGTATGGGGA | + |
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Preference number: 2 (lower is better) Translates to: KCLITAHLSYTSEDPTVPKEWCQ*QLCVWG Trigger: TCCCCATACACACAGTTGTCATTGGCACCATTCTTT...TGGAACTGTTGGATCTTCAGATGTGTAACTTAAGTGTGCTGTTATTAAACACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085513.6 |
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| 3UTR-3UTR GCA 90 bp | TCCCCTGTTCTGCATTATCCATTAACTAGCATGGACCCTAGCATACCATTTTACAGCTACATTTTAGCATaGATCAAGCTAATGATCAAC | + |
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Preference number: 2 (lower is better) Translates to: SPVLHYPLTSMDPSIPFYSYILA*IKLMIN Trigger: GTTGATCATTAGCTTGATGCATGCTAAAATGTAGCT...GTAAAATGGTATGCTAGGGTCCATGCTAGTTAATGGATAATGCAGAACAGGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085513.6 |
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| 3UTR GCA 72 bp | ACTTTCCCAATGCCACTGATAAAGGTGAGAGAGCTCTaGCCAGCCAAGCAGGACGCCGTCCCAACTCCATGG | + |
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Preference number: 3 (lower is better) Translates to: TFPMPLIKVREL*PAKQDAVPTPW Trigger: CCATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGGAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| 3UTR-3UTR CAA 90 bp | GACGCCTCTCATAGGGAGAAGGAGCAGGGTGTGCCTAGAGTCGGTGTGATGGGAAGGTGCTCGTGGGACTaGAAAACTTTGAAAATCTGT | + |
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Preference number: 3 (lower is better) Translates to: DASHREKEQGVPRVGVMGRCSWD*KTLKIC Trigger: ACAGATTTTCAAAGTTTTCAAGTCCCACGAGCACCT...TCCCATCACACCGACTCTAGGCACACCCTGCTCCTTCTCCCTATGAGAGGCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085513.6 |
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| 3UTR-3UTR CAA 90 bp | GACGCCTCTCATAGGGAGAAGGAGCAGGGTGTGCCTAGAGTCGGTGTGATGGGAATTCAAACATTTACTTaGACTTTCCCAATGCCACTG | + |
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Preference number: 3 (lower is better) Translates to: DASHREKEQGVPRVGVMGIQTFT*TFPMPL Trigger: CAGTGGCATTGGGAAAGTCAAAGTAAATGTTTGAAT...TCCCATCACACCGACTCTAGGCACACCCTGCTCCTTCTCCCTATGAGAGGCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085513.6 |
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| 3UTR-3UTR CAA 90 bp | TTTTTCTTACATGTTCTTTCCGATGCTCAACTAAACCCACAGCCTGCTTGGCTGCACTTTGCAAACCAGTaGTCGCCAAGTAAAACAGTG | + |
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Preference number: 3 (lower is better) Translates to: FFLHVLSDAQLNPQPAWLHFANQ*SPSKTV Trigger: CACTGTTTTACTTGGCGACAACTGGTTTGCAAAGTG...CAGCCAAGCAGGCTGTGGGTTTAGTTGAGCATCGGAAAGAACATGTAAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206169.2 |
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| 3UTR TCA 72 bp | AAAGTGTTTAATAACAGCACACTTAAGTTACACATCTaGAGATCCAACAGTTCCACAAGGAGGCTTGCATCA | + |
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Preference number: 3 (lower is better) Translates to: KVFNNSTLKLHI*RSNSSTRRLAS Trigger: TGATGCAAGCCTCCTTGTGGAACTGTTGGATCTTCAGATGTGTAACTTAAGTGTGCTGTTATTAAACACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085513.6 |
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| 3UTR GCA 72 bp | TACATTTTAGCATGCATCAAGCTAATGATCAACACTTaGACTGTAATGGTCAACCTGAGACTGAATGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: YILACIKLMINT*TVMVNLRLNVS Trigger: AGAGACATTCAGTCTCAGGTTGACCATTACAGTGCAAGTGTTGATCATTAGCTTGATGCATGCTAAAATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085513.6 |
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| 3UTR GCA 72 bp | CTAGTCAAATTTTCCCAAAGGGTTTGTGTAGCTTTTTaGCTTAAAGATTACAGTATGACATTCAAAGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: LVKFSQRVCVAF*LKDYSMTFKGR Trigger: TCTTCCTTTGAATGTCATACTGTAATCTTTAAGGCAAAAAGCTACACAAACCCTTTGGGAAAATTTGACTAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
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| CDS-3UTR CCA 90 bp | GAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGGCCGAATCCAAGCCGCGCCACCTCTaGTGCGCGCAGCGGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: ERALPSQAGRRPNSMAESKPRHL*CAQRSG Trigger: GCCGCTCCGCTGCGCGCACCAGAGGTGGCGCGGCTT...GGATTCGGCCATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
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| CDS-3UTR CCA 90 bp | GCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACAAGCCGCGCCACCTCTaGTGCGCGCAGCGGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: ATDKGERALPSQAGRRPNKPRHL*CAQRSG Trigger: GCCGCTCCGCTGCGCGCACCAGAGGTGGCGCGGCTT...GTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
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| CDS-3UTR CCA 90 bp | AATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCCGGCCTCCTCAGAGCTaGTGCTCCGCAGGAGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: NATDKGERALPSQAGRRPRPPQS*CSAGAP Trigger: GGGGGCTCCTGCGGAGCACCAGCTCTGAGGAGGCCG...GGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR GCA 90 bp | GACGCCTCTCATAGGGAGAAGGAGCAGGGTGTGCCTAGAGTCGGTGTGATGGGAGTGACCACCTTTTCCTaGTCCTCGCGAAGCCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: DASHREKEQGVPRVGVMGVTTFS*SSRSRA Trigger: GGCGCGGCTTCGCGAGGAGCAGGAAAAGGTGGTCAC...TCCCATCACACCGACTCTAGGCACACCCTGCTCCTTCTCCCTATGAGAGGCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085513.6 |
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| CDS-3UTR GCA 90 bp | CCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTGTGACCACCTTTTCCTaGTCCTCGCGAAGCCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: PLIKVRELCPAKQDAVPTVTTFS*SSRSRA Trigger: GGCGCGGCTTCGCGAGGAGCAGGAAAAGGTGGTCAC...AGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
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| CDS-3UTR TCA 90 bp | GAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGGCCGAATCCCACAGCCTGCTTGGCTaGGCACTTTGCAAACCAGTT | + |
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Preference number: 4 (lower is better) Translates to: ERALPSQAGRRPNSMAESHSLLG*ALCKPV Trigger: AACTGGTTTGCAAAGTGCTCAGCCAAGCAGGCTGTG...GGATTCGGCCATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR TCA 90 bp | GCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACAGCCTCAGACACTCCTaGGGGCAAAGGCTTCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: ATDKGERALPSQAGRRPNSLRHS*GQRLLG Trigger: CCCAAGAAGCCTTTGCCCTCAGGAGTGTCTGAGGCT...GTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CCA 90 bp | AAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGGCCGAACCCACAGCCTGCTTaGCTGAGCACTTTGCAAACC | + |
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Preference number: 4 (lower is better) Translates to: KVRELCPAKQDAVPTPWPNPQPA*LSTLQT Trigger: GGTTTGCAAAGTGCTCAGCCAAGCAGGCTGTGGGTT...CGGCCATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR TCA 90 bp | AATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCTATCAGCAGGACTCTTaGTGGCAGGCAGCTCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: NATDKGERALPSQAGRRPYQQDS*WQAARG Trigger: CCCACGAGCTGCCTGCCATCAAGAGTCCTGCTGATA...GGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR TCA 90 bp | AATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAGCCTCAGACACTCCTaGGGGCAAAGGCTTCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: NATDKGERALPSQAGRRPSLRHS*GQRLLG Trigger: CCCAAGAAGCCTTTGCCCTCAGGAGTGTCTGAGGCT...GGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR TCA 90 bp | CCCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTGTGGGGAGGGCATGGTaGGCAATGGCTGAGTATGGT | + |
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Preference number: 4 (lower is better) Translates to: PNATDKGERALPSQAGRRVGRAW*AMAEYG Trigger: ACCATACTCAGCCATTGCTCACCATGCCCTCCCCAC...ACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR TCA 90 bp | CCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCGTGGGGAGGGCATGGTaGGCAATGGCTGAGTATGGT | + |
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Preference number: 4 (lower is better) Translates to: PMPLIKVRELCPAKQDAVVGRAW*AMAEYG Trigger: ACCATACTCAGCCATTGCTCACCATGCCCTCCCCAC...GACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR GCA 90 bp | AAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGGCCGACTAAACCCACAGCCTaGTTGGCTGAGCACTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: KVRELCPAKQDAVPTPWPTKPTA*LAEHFA Trigger: TGCAAAGTGCTCAGCCAAGCAGGCTGTGGGTTTAGT...CGGCCATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CCA 90 bp | CTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCACTTTTCGCTCTGGAATaGTGGGGAGGGCATGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LIKVRELCPAKQDAVPTPLFALE*WGGHGE Trigger: CTCACCATGCCCTCCCCACCATTCCAGAGCGAAAAG...TGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CCA 90 bp | CCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCTTTTCGCTCTGGAATaGTGGGGAGGGCATGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: PLIKVRELCPAKQDAVPTLFALE*WGGHGE Trigger: CTCACCATGCCCTCCCCACCATTCCAGAGCGAAAAG...AGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CCA 90 bp | CCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCTTTTCGCTCTGGAATaGTGGGGAGGGCATGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: PMPLIKVRELCPAKQDAVLFALE*WGGHGE Trigger: CTCACCATGCCCTCCCCACCATTCCAGAGCGAAAAG...GACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CCA 90 bp | ATGGCCGAATCCGCCGCATGTCCTAAAGCGCAGCTGGAGCTGCAGGCGGAGCCCTGCTGGATTTTCTCTTaGCAGTTAGTGACCACCAAG | + |
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Preference number: 4 (lower is better) Translates to: MAESAACPKAQLELQAEPCWIFS*QLVTTK Trigger: CTTGGTGGTCACTAACTGCCAAGAGAAAATCCAGCA...GGGCTCCGCCTGCAGCTCCAGCTGCGCTTTAGGACATGCGGCGGATTCGGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206581.2 |
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| CDS-3UTR TCA 90 bp | CCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCTAGTTTTCCTGGCATaGAGGCAAGAGGGCCGAATG | + |
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Preference number: 4 (lower is better) Translates to: PMPLIKVRELCPAKQDAVLVFLA*RQEGRM Trigger: CATTCGGCCCTCTTGCCTTCATGCCAGGAAAACTAG...GACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR TCA 90 bp | AATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCCTAGTTTTCCTGGCATaGAGGCAAGAGGGCCGAATG | + |
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Preference number: 4 (lower is better) Translates to: NATDKGERALPSQAGRRPLVFLA*RQEGRM Trigger: CATTCGGCCCTCTTGCCTTCATGCCAGGAAAACTAG...GGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR TCA 90 bp | GATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGGCAGAAGAGTTCCGATaGGCTAGCAAAGAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: DKGERALPSQAGRRPNSMAEEFR*ASKEQQ Trigger: CTGCTGCTCTTTGCTAGCTCATCGGAACTCTTCTGC...CATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206581.2 |
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| CDS-3UTR GCA 90 bp | GAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGGCCGAATCCACATGTTCTTTCCGATaGTCAACTAAACCCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: ERALPSQAGRRPNSMAESTCSFR*STKPTA Trigger: GGCTGTGGGTTTAGTTGAGCATCGGAAAGAACATGT...GGATTCGGCCATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CCA 90 bp | ATGGCCGAATCCGCCGCATGTCCTAAAGCGCAGCTGGAGCTGCAGGCGGAGCCCGTGACTTCATTAGTGTaGACTAGTTTTCCTGGCATG | + |
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Preference number: 4 (lower is better) Translates to: MAESAACPKAQLELQAEPVTSLV*TSFPGM Trigger: CATGCCAGGAAAACTAGTCCACACTAATGAAGTCAC...GGGCTCCGCCTGCAGCTCCAGCTGCGCTTTAGGACATGCGGCGGATTCGGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CCA 90 bp | CCCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTAACCCACAGCCTGCTTaGCTGAGCACTTTGCAAACC | + |
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Preference number: 4 (lower is better) Translates to: PNATDKGERALPSQAGRRNPQPA*LSTLQT Trigger: GGTTTGCAAAGTGCTCAGCCAAGCAGGCTGTGGGTT...ACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CCA 90 bp | CCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCACCAAGACATACACTaGAGCCCTCTGAGGATCGTG | + |
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Preference number: 4 (lower is better) Translates to: PLIKVRELCPAKQDAVPTHQDIH*SPLRIV Trigger: CACGATCCTCAGAGGGCTCCAGTGTATGTCTTGGTG...AGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206581.2 |
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| CDS-3UTR TCA 90 bp | GACTTTCCCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGATATCAGCAGGACTCTTaGTGGCAGGCAGCTCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: DFPNATDKGERALPSQAGYQQDS*WQAARG Trigger: CCCACGAGCTGCCTGCCATCAAGAGTCCTGCTGATA...TCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGGAAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CCA 90 bp | CCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTAGAGGAGTCTGTCACTaGAGACACCACATTCACACC | + |
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Preference number: 4 (lower is better) Translates to: PLIKVRELCPAKQDAVPTRGVCH*RHHIHT Trigger: GGTGTGAATGTGGTGTCTCCAGTGACAGACTCCTCT...AGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CCA 90 bp | CTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCAAGAGGAGTCTGTCACTaGAGACACCACATTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: LIKVRELCPAKQDAVPTPRGVCH*RHHIHT Trigger: GGTGTGAATGTGGTGTCTCCAGTGACAGACTCCTCT...TGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGGCCGAATCCTCTTTCGTTTCCGTTTaGCTTCCTCTTTCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ERALPSQAGRRPNSMAESSFVSV*LPLSSH Trigger: GTGAGAAGAAAGAGGAAGCCAAACGGAAACGAAAGA...GGATTCGGCCATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CCA 90 bp | CCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCAAAGGCTTCTTGGGGTaGTTCTCTTGGAGTTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PMPLIKVRELCPAKQDAVKGFLG*FSWSSS Trigger: GGACGAACTCCAAGAGAACCACCCCAAGAAGCCTTT...GACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CCA 90 bp | CCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTAACTTCTTTTCGCTCTaGAATGGTGGGGAGGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PLIKVRELCPAKQDAVPTNFFSL*NGGEGM Trigger: CATGCCCTCCCCACCATTCCAGAGCGAAAAGAAGTT...AGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGCAGAACATTACAGCATTCAAACATTTACTTTGACTTTCCCAATGCCACTCGGCCTCCTCAGAGCTaGTGCTCCGCAGGAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASRTLQHSNIYFDFPNATRPPQS*CSAGAP Trigger: GGGGGCTCCTGCGGAGCACCAGCTCTGAGGAGGCCG...AGTGGCATTGGGAAAGTCAAAGTAAATGTTTGAATGCTGTAATGTTCTGCTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| CDS-3UTR CCA 90 bp | ATCCAACAGTTCCACAAGGAGGCTTGCATCAGGAGGAGGTTAGCACAGGACGCCAAAGGCTTCTTGGGGTaGTTCTCTTGGAGTTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IQQFHKEACIRRRLAQDAKGFLG*FSWSSS Trigger: GGACGAACTCCAAGAGAACCACCCCAAGAAGCCTTT...GGCGTCCTGTGCTAACCTCCTCCTGATGCAAGCCTCCTTGTGGAACTGTTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085513.6 |
||
| CDS-3UTR TCA 90 bp | TTGACTTTCCCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGCACAGCCTGCTTGGCTaGGCACTTTGCAAACCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTFPMPLIKVRELCPAKQHSLLG*ALCKPV Trigger: AACTGGTTTGCAAAGTGCTCAGCCAAGCAGGCTGTG...CTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGGAAAGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CCA 90 bp | CTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGCTGGATTTTCTCTTaGCAGTTAGTGACCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIKVRELCPAKQDAVPTPCWIFS*QLVTTF Trigger: AAAGGTGGTCACTAACTGCCAAGAGAAAATCCAGCA...TGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| CDS-3UTR CCA 90 bp | AATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCTCTTTCGTTTCCGTTTaGCTTCCTCTTTCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NATDKGERALPSQAGRRPSFVSV*LPLSSH Trigger: GTGAGAAGAAAGAGGAAGCCAAACGGAAACGAAAGA...GGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CCA 90 bp | GACTTTCCCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGAAAAGGCTTCTTGGGGTaGTTCTCTTGGAGTTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DFPNATDKGERALPSQAGKGFLG*FSWSSS Trigger: GGACGAACTCCAAGAGAACCACCCCAAGAAGCCTTT...TCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGGAAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CCA 90 bp | CATGACGTCGTAAGACAGCTTGTCAGGCAAGGTCCTCAGCCTCTCTTGAAGAGCTGCTGGATTTTCTCTTaGCAGTTAGTGACCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HDVVRQLVRQGPQPLLKSCWIFS*QLVTTA Trigger: GGCGGTGGTCACTAACTGCCAAGAGAAAATCCAGCA...GCTCTTCAAGAGAGGCTGAGGACCTTGCCTGACAAGCTGTCTTACGACGTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206169.2 |
||
| CDS-3UTR GCA 90 bp | TTGACTTTCCCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGACTAAACCCACAGCCTaGTTGGCTGAGCACTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTFPMPLIKVRELCPAKQTKPTA*LAEHFA Trigger: TGCAAAGTGCTCAGCCAAGCAGGCTGTGGGTTTAGT...CTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGGAAAGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CCA 90 bp | TTGACTTTCCCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGAACTTCTTTTCGCTCTaGAATGGTGGGGAGGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LTFPMPLIKVRELCPAKQNFFSL*NGGEGM Trigger: CATGCCCTCCCCACCATTCCAGAGCGAAAAGAAGTT...CTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGGAAAGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CCA 90 bp | CCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCTGAAGTTTTTGGTTTaGAATGAGGTTTGTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PMPLIKVRELCPAKQDAVLKFLV*NEVCEQ Trigger: TTGCTCACAAACCTCATTCCAAACCAAAAACTTCAG...GACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGTCAAATTTTCCCAAAGGGTTTGTGTAGCTTTTTGCCTTAAAGATTACCGGCCTCCTCAGAGCTaGTGCTCCGCAGGAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLVKFSQRVCVAFCLKDYRPPQS*CSAGAP Trigger: GGGGGCTCCTGCGGAGCACCAGCTCTGAGGAGGCCG...GTAATCTTTAAGGCAAAAAGCTACACAAACCCTTTGGGAAAATTTGACTAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| CDS-3UTR CCA 90 bp | TTAGACAGTAGTCACAGAATTAACGAAGCCAGCAGAACATTACAGCATTCAAACGTCCTAAAGCGCAGCTaGAGCTGCAGGCGGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LDSSHRINEASRTLQHSNVLKRS*SCRRSP Trigger: AGGGCTCCGCCTGCAGCTCCAGCTGCGCTTTAGGAC...GTTTGAATGCTGTAATGTTCTGCTGGCTTCGTTAATTCTGTGACTACTGTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205918.2 |
||
| CDS-3UTR GCA 90 bp | TTAGACAGTAGTCACAGAATTAACGAAGCCAGCAGAACATTACAGCATTCAAACAAGGTGAGAGAGCTCTaGCCAGCCAAGCAGGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: LDSSHRINEASRTLQHSNKVREL*PAKQDA Trigger: GGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTT...GTTTGAATGCTGTAATGTTCTGCTGGCTTCGTTAATTCTGTGACTACTGTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205918.2 |
||
| CDS-3UTR TCA 90 bp | TTAGACAGTAGTCACAGAATTAACGAAGCCAGCAGAACATTACAGCATTCAAACGCTCTCAGACACTCCTaGGGGCAAAGGCTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDSSHRINEASRTLQHSNALRHS*GQRLLG Trigger: CCCAAGAAGCCTTTGCCCTCAGGAGTGTCTGAGAGC...GTTTGAATGCTGTAATGTTCTGCTGGCTTCGTTAATTCTGTGACTACTGTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205918.2 |
||
| CDS-3UTR TCA 90 bp | CACAGAATTAACGAAGCCAGCAGAACATTACAGCATTCAAACATTTACTTTGACGTGGGGAGGGCATGGTaGGCAATGGCTGAGTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HRINEASRTLQHSNIYFDVGRAW*AMAEYG Trigger: ACCATACTCAGCCATTGCTCACCATGCCCTCCCCAC...GTCAAAGTAAATGTTTGAATGCTGTAATGTTCTGCTGGCTTCGTTAATTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCAGAACATTACAGCATTCAAACATTTACTTTGACTTTCCCAATGCCACTGAACCCACAGCCTGCTTaGCTGAGCACTTTGCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: PAEHYSIQTFTLTFPMPLNPQPA*LSTLQT Trigger: GGTTTGCAAAGTGCTCAGCCAAGCAGGCTGTGGGTT...CAGTGGCATTGGGAAAGTCAAAGTAAATGTTTGAATGCTGTAATGTTCTGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| CDS-3UTR TCA 90 bp | GACAGTAGTCACAGAATTAACGAAGCCAGCAGAACATTACAGCATTCAAACATTCTAGTTTTCCTGGCATaGAGGCAAGAGGGCCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: DSSHRINEASRTLQHSNILVFLA*RQEGRM Trigger: CATTCGGCCCTCTTGCCTTCATGCCAGGAAAACTAG...AATGTTTGAATGCTGTAATGTTCTGCTGGCTTCGTTAATTCTGTGACTACTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| CDS-3UTR GCA 90 bp | TTAACATGGTCCATATGGAAAGCACAACATCACAGCTGGTACGAAACTGCCTGTACATGTTCTTTCCGATaGTCAACTAAACCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTWSIWKAQHHSWYETACTCSFR*STKPTA Trigger: GGCTGTGGGTTTAGTTGAGCATCGGAAAGAACATGT...ACAGGCAGTTTCGTACCAGCTGTGATGTTGTGCTTTCCATATGGACCATGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| CDS-3UTR GCA 90 bp | GACAGTAGTCACAGAATTAACGAAGCCAGCAGAACATTACAGCATTCAAACATTACTAAACCCACAGCCTaGTTGGCTGAGCACTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DSSHRINEASRTLQHSNITKPTA*LAEHFA Trigger: TGCAAAGTGCTCAGCCAAGCAGGCTGTGGGTTTAGT...AATGTTTGAATGCTGTAATGTTCTGCTGGCTTCGTTAATTCTGTGACTACTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| CDS-3UTR CCA 90 bp | ACATTTACTTTGACTTTCCCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCATGCTGGATTTTCTCTTaGCAGTTAGTGACCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TFTLTFPMPLIKVRELCPCWIFS*QLVTTF Trigger: AAAGGTGGTCACTAACTGCCAAGAGAAAATCCAGCA...TGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGGAAAGTCAAAGTAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| CDS-3UTR CCA 90 bp | GACAGTAGTCACAGAATTAACGAAGCCAGCAGAACATTACAGCATTCAAACATTAGAGGAGTCTGTCACTaGAGACACCACATTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: DSSHRINEASRTLQHSNIRGVCH*RHHIHT Trigger: GGTGTGAATGTGGTGTCTCCAGTGACAGACTCCTCT...AATGTTTGAATGCTGTAATGTTCTGCTGGCTTCGTTAATTCTGTGACTACTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| CDS-3UTR CCA 90 bp | TTAGACAGTAGTCACAGAATTAACGAAGCCAGCAGAACATTACAGCATTCAAACAAAGGCTTCTTGGGGTaGTTCTCTTGGAGTTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LDSSHRINEASRTLQHSNKGFLG*FSWSSS Trigger: GGACGAACTCCAAGAGAACCACCCCAAGAAGCCTTT...GTTTGAATGCTGTAATGTTCTGCTGGCTTCGTTAATTCTGTGACTACTGTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000205918.2 ENSMUST00000206327.2 |
||
| CDS-3UTR GCA 90 bp | GACAGTAGTCACAGAATTAACGAAGCCAGCAGAACATTACAGCATTCAAACATTACATGTTCTTTCCGATaGTCAACTAAACCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSSHRINEASRTLQHSNITCSFR*STKPTA Trigger: GGCTGTGGGTTTAGTTGAGCATCGGAAAGAACATGT...AATGTTTGAATGCTGTAATGTTCTGCTGGCTTCGTTAATTCTGTGACTACTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCAGAACATTACAGCATTCAAACATTTACTTTGACTTTCCCAATGCCACTGTCTTTCGTTTCCGTTTaGCTTCCTCTTTCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PAEHYSIQTFTLTFPMPLSFVSV*LPLSSH Trigger: GTGAGAAGAAAGAGGAAGCCAAACGGAAACGAAAGA...CAGTGGCATTGGGAAAGTCAAAGTAAATGTTTGAATGCTGTAATGTTCTGCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| 3UTR CAA 72 bp | CTACATTTTAGCATGCATCAAGCTAATGATCAACACTaGCACTGTAATGGTCAACCTGAGACTGAATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHFSMHQANDQH*HCNGQPETECL Trigger: GAGACATTCAGTCTCAGGTTGACCATTACAGTGCAAGTGTTGATCATTAGCTTGATGCATGCTAAAATGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085513.6 |
||
| CDS-3UTR CCA 90 bp | CACAGAATTAACGAAGCCAGCAGAACATTACAGCATTCAAACATTTACTTTGACCTGAAGTTTTTGGTTTaGAATGAGGTTTGTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HRINEASRTLQHSNIYFDLKFLV*NEVCEQ Trigger: TTGCTCACAAACCTCATTCCAAACCAAAAACTTCAG...GTCAAAGTAAATGTTTGAATGCTGTAATGTTCTGCTGGCTTCGTTAATTCTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGTCAAATTTTCCCAAAGGGTTTGTGTAGCTTTTTGCCTTAAAGATTACCTGAAGTTTTTGGTTTaGAATGAGGTTTGTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLVKFSQRVCVAFCLKDYLKFLV*NEVCEQ Trigger: TTGCTCACAAACCTCATTCCAAACCAAAAACTTCAG...GTAATCTTTAAGGCAAAAAGCTACACAAACCCTTTGGGAAAATTTGACTAGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| CDS TCA 90 bp | CTCGCGAAGCCGCGCCACCTCTGGTGCGCGCAGCGGAGCGGCGGCTaGGGCCTCTGCAAGGGGCTGGGGCTCGGGCTCGGGTTCGGACGG | + |
|
Preference number: 5 (lower is better) Translates to: LAKPRHLWCAQRSGG*GLCKGLGLGLGFGR Trigger: CCGTCCGAACCCGAGCCCGAGCCCCAGCCCCTTGCAGAGGCCTCAGCCGCCGCTCCGCTGCGCGCACCAGAGGTGGCGCGGCTTCGCGAG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085513.6 |
||
| CDS GCA 90 bp | AGTGACCACCTTTTCCTGCTCCTCGCGAAGCCGCGCCACCTCTGGTaGGCGCAGCGGAGCGGCGGCGCGCCTCCGCGCACGCCCCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SDHLFLLLAKPRHLW*AQRSGGAPPRTPRP Trigger: GGGGCGGGGCGTGCGCGGAGGCGCGCCGCCGCTCCGCTGCGCGCACCAGAGGTGGCGCGGCTTCGCGAGGAGCAGGAAAAGGTGGTCACT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206327.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGGCCGAATCCGCCGCATGTCCTAAAGCGCAGCTGGAGCTGCAGGCGGAGGAGGGCAAAGGCTTCTaGGGGTGGTTCTCTTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SMAESAACPKAQLELQAEEGKGF*GWFSWS Trigger: ACTCCAAGAGAACCACCCCAAGAAGCCTTTGCCCTC...CTCCGCCTGCAGCTCCAGCTGCGCTTTAGGACATGCGGCGGATTCGGCCATGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGGCCGAATCCGCTTGGCTGAGCACTTaGCAAACCAGTTGTCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ERALPSQAGRRPNSMAESAWLST*QTSCRQ Trigger: TTGGCGACAACTGGTTTGCAAAGTGCTCAGCCAAGC...GGATTCGGCCATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | GATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGCAGCGCTGCTCTCACTaGTGTCGCTGCACACGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: DKGERALPSQAGRRPNSMQRCSH*CRCTRC Trigger: ACAGCGTGTGCAGCGACACAAGTGAGAGCAGCGCTG...CATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | AATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCCAGCGCTGCTCTCACTaGTGTCGCTGCACACGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NATDKGERALPSQAGRRPQRCSH*CRCTRC Trigger: ACAGCGTGTGCAGCGACACAAGTGAGAGCAGCGCTG...GGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGGCCGAGGGCAAAGGCTTCTaGGGGTGGTTCTCTTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KGERALPSQAGRRPNSMAEGKGF*GWFSWS Trigger: ACTCCAAGAGAACCACCCCAAGAAGCCTTTGCCCTC...GGCCATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGGCCGAATCCGGTCCTCAGCCTCTCTaGAAGAGCACTGTAGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: ERALPSQAGRRPNSMAESGPQPL*KSTVVI Trigger: AATGACTACAGTGCTCTTCAAGAGAGGCTGAGGACC...GGATTCGGCCATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGGCCGGGTCCTCAGCCTCTCTaGAAGAGCACTGTAGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: KVRELCPAKQDAVPTPWPGPQPL*KSTVVI Trigger: AATGACTACAGTGCTCTTCAAGAGAGGCTGAGGACC...CGGCCATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | GCACAGGACGCCTCTCATAGGGAGAAGGAGCAGGGTGTGCCTAGAGTCGGTGTGGAGGGCAAAGGCTTCTaGGGGTGGTTCTCTTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AQDASHREKEQGVPRVGVEGKGF*GWFSWS Trigger: ACTCCAAGAGAACCACCCCAAGAAGCCTTTGCCCTC...CACACCGACTCTAGGCACACCCTGCTCCTTCTCCCTATGAGAGGCGTCCTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085513.6 |
||
| CDS CCA 90 bp | CCAGAAAAAGCCTCAGACACTCCTGAGGGCAAAGGCTTCTTGGGGTaGTTCTCTTGGAGTTCGTCCAAACTGCTCCCGCCGGCCTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PEKASDTPEGKGFLG*FSWSSSKLLPPASV Trigger: TACCGAGGCCGGCGGGAGCAGTTTGGACGAACTCCAAGAGAACCACCCCAAGAAGCCTTTGCCCTCAGGAGTGTCTGAGGCTTTTTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | CCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCATATCAGCAGGACTCTaGATGGCAGGCAGCTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PMPLIKVRELCPAKQDAVISAGL*MAGSSW Trigger: CCACGAGCTGCCTGCCATCAAGAGTCCTGCTGATAT...GACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | AATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCGCTTGGCTGAGCACTTaGCAAACCAGTTGTCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: NATDKGERALPSQAGRRPAWLST*QTSCRQ Trigger: TTGGCGACAACTGGTTTGCAAAGTGCTCAGCCAAGC...GGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | CCCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTAAACCCACAGCCTGCTaGGCTGAGCACTTTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PNATDKGERALPSQAGRRKPTAC*AEHFAN Trigger: GTTTGCAAAGTGCTCAGCCAAGCAGGCTGTGGGTTT...ACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | CTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCAAAACCCACAGCCTGCTaGGCTGAGCACTTTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LIKVRELCPAKQDAVPTPKPTAC*AEHFAN Trigger: GTTTGCAAAGTGCTCAGCCAAGCAGGCTGTGGGTTT...TGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | GATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGAAACCCACAGCCTGCTaGGCTGAGCACTTTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: DKGERALPSQAGRRPNSMKPTAC*AEHFAN Trigger: GTTTGCAAAGTGCTCAGCCAAGCAGGCTGTGGGTTT...CATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | ATGGCCGAATCCGCCGCATGTCCTAAAGCGCAGCTGGAGCTGCAGGCGGAGCCCCTCTGTCTTCTCCATTaGCAATCACAGTATCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: MAESAACPKAQLELQAEPLCLLH*QSQYQV Trigger: AACCTGATACTGTGATTGCAAATGGAGAAGACAGAG...GGGCTCCGCCTGCAGCTCCAGCTGCGCTTTAGGACATGCGGCGGATTCGGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGGCCGCTCTTTCGTTTCCGTTaGGCTTCCTCTTTCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KVRELCPAKQDAVPTPWPLFRFR*ASSFFS Trigger: TGAGAAGAAAGAGGAAGCCAAACGGAAACGAAAGAG...CGGCCATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGGCCGAATCCGACTTGAGGATTGACTaGCGAGGAACATATTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ERALPSQAGRRPNSMAESDLRID*RGTYSP Trigger: TGGAGAATATGTTCCTCGCAAGTCAATCCTCAAGTC...GGATTCGGCCATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGGCCGAATCCACTTTGACACCCTCTTaGTGGGTTCCTCTGATACTT | + |
|
Preference number: 5 (lower is better) Translates to: ERALPSQAGRRPNSMAESTLTPS*WVPLIL Trigger: AAGTATCAGAGGAACCCACAAAGAGGGTGTCAAAGT...GGATTCGGCCATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | GACGCCTCTCATAGGGAGAAGGAGCAGGGTGTGCCTAGAGTCGGTGTGATGGGAGGTCCTCAGCCTCTCTaGAAGAGCACTGTAGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: DASHREKEQGVPRVGVMGGPQPL*KSTVVI Trigger: AATGACTACAGTGCTCTTCAAGAGAGGCTGAGGACC...TCCCATCACACCGACTCTAGGCACACCCTGCTCCTTCTCCCTATGAGAGGCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085513.6 |
||
| CDS-3UTR CAA 90 bp | GATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGACCCAGCAGTTCTTCTaGTCTCTCCAGCTCTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DKGERALPSQAGRRPNSMTQQFF*SLQLFK Trigger: CTTGAAGAGCTGGAGAGACAAGAAGAACTGCTGGGT...CATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | CCATGGCCGAATCCGCCGCATGTCCTAAAGCGCAGCTGGAGCTGCAGGCGGAGCTGCTGTGGTAAGAATTaGAGCCATTCACTGAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: PWPNPPHVLKRSWSCRRSCCGKN*SHSLNS Trigger: ACTATTCAGTGAATGGCTCAAATTCTTACCACAGCA...GCTCCGCCTGCAGCTCCAGCTGCGCTTTAGGACATGCGGCGGATTCGGCCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS TCA 90 bp | CTGCAGGCGGAGCCCTCTAGCTTCTCTGCTGCAATCGGGCAGCTCTaGACTTTGACACCCTCTTTGTGGGTTCCTCTGATACTTCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LQAEPSSFSAAIGQL*TLTPSLWVPLILLM Trigger: CATCAGAAGTATCAGAGGAACCCACAAAGAGGGTGTCAAAGTTCAGAGCTGCCCGATTGCAGCAGAGAAGCTAGAGGGCTCCGCCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205918.2 |
||
| CDS-3UTR CAA 90 bp | GCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACCTCTTTCGTTTCCGTTaGGCTTCCTCTTTCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ATDKGERALPSQAGRRPNLFRFR*ASSFFS Trigger: TGAGAAGAAAGAGGAAGCCAAACGGAAACGAAAGAG...GTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CAA 90 bp | GATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGCACTTTGCAAACCAGTaGTCGCCAAGTAAAACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DKGERALPSQAGRRPNSMHFANQ*SPSKTV Trigger: CACTGTTTTACTTGGCGACAACTGGTTTGCAAAGTG...CATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | CCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCACTTTGCAAACCAGTaGTCGCCAAGTAAAACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLIKVRELCPAKQDAVPTHFANQ*SPSKTV Trigger: CACTGTTTTACTTGGCGACAACTGGTTTGCAAAGTG...AGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | GACTTTCCCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGAGCTTGGCTGAGCACTTaGCAAACCAGTTGTCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: DFPNATDKGERALPSQAGAWLST*QTSCRQ Trigger: TTGGCGACAACTGGTTTGCAAAGTGCTCAGCCAAGC...TCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGGAAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS-3UTR CAA 90 bp | GATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGCTCTTTCGTTTCCGTTaGGCTTCCTCTTTCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: DKGERALPSQAGRRPNSMLFRFR*ASSFFS Trigger: TGAGAAGAAAGAGGAAGCCAAACGGAAACGAAAGAG...CATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CAA 90 bp | CCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCGACTTGAGGATTGACTaGCGAGGAACATATTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PMPLIKVRELCPAKQDAVDLRID*RGTYSP Trigger: TGGAGAATATGTTCCTCGCAAGTCAATCCTCAAGTC...GACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CAA 90 bp | CCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTACTTTGACACCCTCTTaGTGGGTTCCTCTGATACTT | + |
|
Preference number: 5 (lower is better) Translates to: PLIKVRELCPAKQDAVPTTLTPS*WVPLIL Trigger: AAGTATCAGAGGAACCCACAAAGAGGGTGTCAAAGT...AGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS CCA 90 bp | GTTCCTCTGATACTTCTGATGGAACTTCTTTTCGCTCTGGAATGGTaGGGAGGGCATGGTGAGCAATGGCTGAGTATGGTGCTAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPLILLMELLFALEW*GGHGEQWLSMVLGR Trigger: CCTCCCTAGCACCATACTCAGCCATTGCTCACCATGCCCTCCCCACCATTCCAGAGCGAAAAGAAGTTCCATCAGAAGTATCAGAGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS CCA 90 bp | TGGGTTCCTCTGATACTTCTGATGGAACTTCTTTTCGCTCTGGAATaGTGGGGAGGGCATGGTGAGCAATGGCTGAGTATGGTGCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WVPLILLMELLFALE*WGGHGEQWLSMVLG Trigger: CCCTAGCACCATACTCAGCCATTGCTCACCATGCCCTCCCCACCATTCCAGAGCGAAAAGAAGTTCCATCAGAAGTATCAGAGGAACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS TCA 90 bp | TGTGTCGCTGCACACGCTGTTCTCTCGGCTGCGAGACTTGAGGATTaGCTTGCGAGGAACATATTCTCCATTCACAACATCCACGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CVAAHAVLSAARLED*LARNIFSIHNIHED Trigger: GTCTTCGTGGATGTTGTGAATGGAGAATATGTTCCTCGCAAGTCAATCCTCAAGTCTCGCAGCCGAGAGAACAGCGTGTGCAGCGACACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CAA 90 bp | AATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCTGCTGTGGTAAGAATTaGAGCCATTCACTGAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: NATDKGERALPSQAGRRPCCGKN*SHSLNS Trigger: ACTATTCAGTGAATGGCTCAAATTCTTACCACAGCA...GGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CAA 90 bp | GATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGACGCCGTCCCAACTCCATGTGCTGTGGTAAGAATTaGAGCCATTCACTGAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: DKGERALPSQAGRRPNSMCCGKN*SHSLNS Trigger: ACTATTCAGTGAATGGCTCAAATTCTTACCACAGCA...CATGGAGTTGGGACGGCGTCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS TCA 90 bp | TCTCACTTGTGTCGCTGCACACGCTGTTCTCTCGGCTGCGAGACTTaGGGATTGACTTGCGAGGAACATATTCTCCATTCACAACATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHLCRCTRCSLGCET*GLTCEEHILHSQHP Trigger: TGGATGTTGTGAATGGAGAATATGTTCCTCGCAAGTCAATCCTCAAGTCTCGCAGCCGAGAGAACAGCGTGTGCAGCGACACAAGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CAA 90 bp | GACTTTCCCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAGCCAAGCAGGAGACTTGAGGATTGACTaGCGAGGAACATATTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DFPNATDKGERALPSQAGDLRID*RGTYSP Trigger: TGGAGAATATGTTCCTCGCAAGTCAATCCTCAAGTC...TCCTGCTTGGCTGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGGAAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CAA 90 bp | ACATTTACTTTGACTTTCCCAATGCCACTGATAAAGGTGAGAGAGCTCTGCCCAACCCAGCAGTTCTTCTaGTCTCTCCAGCTCTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TFTLTFPMPLIKVRELCPTQQFF*SLQLFK Trigger: CTTGAAGAGCTGGAGAGACAAGAAGAACTGCTGGGT...TGGGCAGAGCTCTCTCACCTTTATCAGTGGCATTGGGAAAGTCAAAGTAAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS-3UTR CAA 90 bp | GCCAGCAGAACATTACAGCATTCAAACATTTACTTTGACTTTCCCAATGCCACTATATCAGCAGGACTCTaGATGGCAGGCAGCTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASRTLQHSNIYFDFPNATISAGL*MAGSSW Trigger: CCACGAGCTGCCTGCCATCAAGAGTCCTGCTGATAT...AGTGGCATTGGGAAAGTCAAAGTAAATGTTTGAATGCTGTAATGTTCTGCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
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| CDS-3UTR CAA 90 bp | CCAGCAGAACATTACAGCATTCAAACATTTACTTTGACTTTCCCAATGCCACTGATATCAGCAGGACTCTaGATGGCAGGCAGCTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PAEHYSIQTFTLTFPMPLISAGL*MAGSSW Trigger: CCACGAGCTGCCTGCCATCAAGAGTCCTGCTGATAT...CAGTGGCATTGGGAAAGTCAAAGTAAATGTTTGAATGCTGTAATGTTCTGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
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| CDS-3UTR CAA 90 bp | CACAGAATTAACGAAGCCAGCAGAACATTACAGCATTCAAACATTTACTTTGACCAGCGCTGCTCTCACTaGTGTCGCTGCACACGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HRINEASRTLQHSNIYFDQRCSH*CRCTRC Trigger: ACAGCGTGTGCAGCGACACAAGTGAGAGCAGCGCTG...GTCAAAGTAAATGTTTGAATGCTGTAATGTTCTGCTGGCTTCGTTAATTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
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| CDS CCA 90 bp | ATGCTGGATTTTCTCTTGGCAGTTAGTGACCACCAAGACATACACTaGAGCCCTCTGAGGATCGTGACTTTCCGGAAAGAAAATTACATG | + |
|
Preference number: 5 (lower is better) Translates to: MLDFLLAVSDHQDIH*SPLRIVTFRKENYM Trigger: CATGTAATTTTCTTTCCGGAAAGTCACGATCCTCAGAGGGCTCCAGTGTATGTCTTGGTGGTCACTAACTGCCAAGAGAAAATCCAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206581.2 |
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| CDS-3UTR CAA 90 bp | TTAGACAGTAGTCACAGAATTAACGAAGCCAGCAGAACATTACAGCATTCAAACGAGGGCAAAGGCTTCTaGGGGTGGTTCTCTTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LDSSHRINEASRTLQHSNEGKGF*GWFSWS Trigger: ACTCCAAGAGAACCACCCCAAGAAGCCTTTGCCCTC...GTTTGAATGCTGTAATGTTCTGCTGGCTTCGTTAATTCTGTGACTACTGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000205918.2 ENSMUST00000206327.2 |
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| CDS-3UTR CAA 90 bp | TTAACATGGTCCATATGGAAAGCACAACATCACAGCTGGTACGAAACTGCCTGTCTCTGTCTTCTCCATTaGCAATCACAGTATCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LTWSIWKAQHHSWYETACLCLLH*QSQYQV Trigger: AACCTGATACTGTGATTGCAAATGGAGAAGACAGAG...ACAGGCAGTTTCGTACCAGCTGTGATGTTGTGCTTTCCATATGGACCATGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| CDS-3UTR CAA 90 bp | AACACTTGCACTGTAATGGTCAACCTGAGACTGAATGTCTCTTTAAGGAGTTTGACTTTGACACCCTCTTaGTGGGTTCCTCTGATACTT | + |
|
Preference number: 5 (lower is better) Translates to: NTCTVMVNLRLNVSLRSLTLTPS*WVPLIL Trigger: AAGTATCAGAGGAACCCACAAAGAGGGTGTCAAAGT...CAAACTCCTTAAAGAGACATTCAGTCTCAGGTTGACCATTACAGTGCAAGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085513.6 |
||
| CDS-3UTR CAA 90 bp | CTTCTAGTCAAATTTTCCCAAAGGGTTTGTGTAGCTTTTTGCCTTAAAGATTACACCCAGCAGTTCTTCTaGTCTCTCCAGCTCTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLVKFSQRVCVAFCLKDYTQQFF*SLQLFK Trigger: CTTGAAGAGCTGGAGAGACAAGAAGAACTGCTGGGT...GTAATCTTTAAGGCAAAAAGCTACACAAACCCTTTGGGAAAATTTGACTAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 |
||
| CDS-3UTR CAA 90 bp | TTAGACAGTAGTCACAGAATTAACGAAGCCAGCAGAACATTACAGCATTCAAACACTTTGACACCCTCTTaGTGGGTTCCTCTGATACTT | + |
|
Preference number: 5 (lower is better) Translates to: LDSSHRINEASRTLQHSNTLTPS*WVPLIL Trigger: AAGTATCAGAGGAACCCACAAAGAGGGTGTCAAAGT...GTTTGAATGCTGTAATGTTCTGCTGGCTTCGTTAATTCTGTGACTACTGTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000205918.2 ENSMUST00000206327.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGTTTAATAACAGCACACTTAAGTTACACATCTGAAGATCCAACAGTTCCACTCTGTCTTCTCCATTaGCAATCACAGTATCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KCLITAHLSYTSEDPTVPLCLLH*QSQYQV Trigger: AACCTGATACTGTGATTGCAAATGGAGAAGACAGAG...TGGAACTGTTGGATCTTCAGATGTGTAACTTAAGTGTGCTGTTATTAAACACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085513.6 |
||
| CDS GCA 72 bp | CTTTTCCTGCTCCTCGCGAAGCCGCGCCACCTCTGGTaGGCGCAGCGGAGCGGCGGCGCGCCTCCGCGCACG | + |
|
Preference number: 6 (lower is better) Translates to: LFLLLAKPRHLW*AQRSGGAPPRT Trigger: CGTGCGCGGAGGCGCGCCGCCGCTCCGCTGCGCGCACCAGAGGTGGCGCGGCTTCGCGAGGAGCAGGAAAAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206327.2 |
||
| CDS CCA 72 bp | CACCTTTTCCTGCTCCTCGCGAAGCCGCGCCACCTCTaGTGCGCGCAGCGGAGCGGCGGCGCGCCTCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: HLFLLLAKPRHL*CAQRSGGAPPR Trigger: GCGCGGAGGCGCGCCGCCGCTCCGCTGCGCGCACCAGAGGTGGCGCGGCTTCGCGAGGAGCAGGAAAAGGTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206327.2 |
||
| CDS CAA 72 bp | CCCGCCGGTCCTCCACATCGGCAGCGCTGCTCTCACTaGTGTCGCTGCACACGCTGTTCTCTCGGCTGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: PAGPPHRQRCSH*CRCTRCSLGCE Trigger: CTCGCAGCCGAGAGAACAGCGTGTGCAGCGACACAAGTGAGAGCAGCGCTGCCGATGTGGAGGACCGGCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS CCA 72 bp | CCATGGCCGAATCCGCCGCATGTCCTAAAGCGCAGCTaGAGCTGCAGGCGGAGCCCTCTAGCTTCTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PWPNPPHVLKRS*SCRRSPLASLL Trigger: CAGCAGAGAAGCTAGAGGGCTCCGCCTGCAGCTCCAGCTGCGCTTTAGGACATGCGGCGGATTCGGCCATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205918.2 |
||
| CDS CCA 72 bp | ACTCCTGAGGGCAAAGGCTTCTTGGGGTGGTTCTCTTaGAGTTCGTCCAAACTGCTCCCGCCGGCCTCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: TPEGKGFLGWFS*SSSKLLPPASV Trigger: TACCGAGGCCGGCGGGAGCAGTTTGGACGAACTCCAAGAGAACCACCCCAAGAAGCCTTTGCCCTCAGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
||
| CDS CCA 72 bp | GCCTCAGACACTCCTGAGGGCAAAGGCTTCTTGGGGTaGTTCTCTTGGAGTTCGTCCAAACTGCTCCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: ASDTPEGKGFLG*FSWSSSKLLPP Trigger: CGGCGGGAGCAGTTTGGACGAACTCCAAGAGAACCACCCCAAGAAGCCTTTGCCCTCAGGAGTGTCTGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS CCA 72 bp | GGAGTCCTGCATTTCCAGCACGCCTTTTACAGCTGCTaGCGGCAGAGGAGTCTGTCACTGGAGACACCACAT | + |
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Preference number: 6 (lower is better) Translates to: GVLHFQHAFYSC*RQRSLSLETPH Trigger: ATGTGGTGTCTCCAGTGACAGACTCCTCTGCCGCCAGCAGCTGTAAAAGGCGTGCTGGAAATGCAGGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS TCA 72 bp | ACTTCTTTTCGCTCTGGAATGGTGGGGAGGGCATGGTaGGCAATGGCTGAGTATGGTGCTAGGGAGGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: TSFRSGMVGRAW*AMAEYGAREGD Trigger: ATCACCCTCCCTAGCACCATACTCAGCCATTGCTCACCATGCCCTCCCCACCATTCCAGAGCGAAAAGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS TCA 72 bp | GAGCCCTCTAGCTTCTCTGCTGCAATCGGGCAGCTCTaGACTTTGACACCCTCTTTGTGGGTTCCTCTGATA | + |
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Preference number: 6 (lower is better) Translates to: EPSSFSAAIGQL*TLTPSLWVPLI Trigger: TATCAGAGGAACCCACAAAGAGGGTGTCAAAGTTCAGAGCTGCCCGATTGCAGCAGAGAAGCTAGAGGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205918.2 |
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| CDS CCA 72 bp | AAAAAGCCTCAGACACTCCTGAGGGCAAAGGCTTCTTaGGGTGGTTCTCTTGGAGTTCGTCCAAACTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: KKPQTLLRAKAS*GGSLGVRPNCS Trigger: GGAGCAGTTTGGACGAACTCCAAGAGAACCACCCCAAGAAGCCTTTGCCCTCAGGAGTGTCTGAGGCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS CAA 72 bp | GTGTCGCTGCACACGCTGTTCTCTCGGCTGCGAGACTaGAGGATTGACTTGCGAGGAACATATTCTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: VSLHTLFSRLRD*RIDLRGTYSPF Trigger: GAATGGAGAATATGTTCCTCGCAAGTCAATCCTCAAGTCTCGCAGCCGAGAGAACAGCGTGTGCAGCGACAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS CAA 72 bp | GAAAAAGCCTCAGACACTCCTGAGGGCAAAGGCTTCTaGGGGTGGTTCTCTTGGAGTTCGTCCAAACTGCTC | + |
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Preference number: 6 (lower is better) Translates to: EKASDTPEGKGF*GWFSWSSSKLL Trigger: GAGCAGTTTGGACGAACTCCAAGAGAACCACCCCAAGAAGCCTTTGCCCTCAGGAGTGTCTGAGGCTTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS CAA 90 bp | TCGCTGCACACGCTGTTCTCTCGGCTGCGAGACTTGAGGATTGACTaGCGAGGAACATATTCTCCATTCACAACATCCACGAAGACTCTG | + |
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Preference number: 6 (lower is better) Translates to: SLHTLFSRLRDLRID*RGTYSPFTTSTKTL Trigger: CAGAGTCTTCGTGGATGTTGTGAATGGAGAATATGTTCCTCGCAAGTCAATCCTCAAGTCTCGCAGCCGAGAGAACAGCGTGTGCAGCGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS CAA 90 bp | CTCTCACTTGTGTCGCTGCACACGCTGTTCTCTCGGCTGCGAGACTaGAGGATTGACTTGCGAGGAACATATTCTCCATTCACAACATCC | + |
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Preference number: 6 (lower is better) Translates to: LSLVSLHTLFSRLRD*RIDLRGTYSPFTTS Trigger: GGATGTTGTGAATGGAGAATATGTTCCTCGCAAGTCAATCCTCAAGTCTCGCAGCCGAGAGAACAGCGTGTGCAGCGACACAAGTGAGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS TCA 72 bp | TGTCGCTGCACACGCTGTTCTCTCGGCTGCGAGACTTaGGGATTGACTTGCGAGGAACATATTCTCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: CRCTRCSLGCET*GLTCEEHILHS Trigger: TGAATGGAGAATATGTTCCTCGCAAGTCAATCCTCAAGTCTCGCAGCCGAGAGAACAGCGTGTGCAGCGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS CCA 72 bp | TTCGCTCTGGAATGGTGGGGAGGGCATGGTGAGCAATaGCTGAGTATGGTGCTAGGGAGGGTGATAAAAATT | + |
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Preference number: 6 (lower is better) Translates to: FALEWWGGHGEQ*LSMVLGRVIKI Trigger: AATTTTTATCACCCTCCCTAGCACCATACTCAGCCATTGCTCACCATGCCCTCCCCACCATTCCAGAGCGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS CCA 72 bp | TTTCGCTCTCAGACACTCCTGAGGGCAAAGGCTTCTTaGGGTGGTTCTCTTGGAGTTCGTCCAAACTGCTNN | + |
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Preference number: 6 (lower is better) Translates to: FRSQTLLRAKAS*GGSLGVRPNCX Trigger: NNAGCAGTTTGGACGAACTCCAAGAGAACCACCCCAAGAAGCCTTTGCCCTCAGGAGTGTCTGAGAGCGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205918.2 |
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| CDS CAA 72 bp | TTTTCGCTCTCAGACACTCCTGAGGGCAAAGGCTTCTaGGGGTGGTTCTCTTGGAGTTCGTCCAAACTGCTN | + |
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Preference number: 6 (lower is better) Translates to: FSLSDTPEGKGF*GWFSWSSSKLL Trigger: NAGCAGTTTGGACGAACTCCAAGAGAACCACCCCAAGAAGCCTTTGCCCTCAGGAGTGTCTGAGAGCGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205918.2 |
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| CDS TCA 72 bp | GCACACGCTGTTCTCTCGGCTGCGAGACTTGAGGATTaGCTTGCGAGGAACATATTCTCCATTCACAACATC | + |
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Preference number: 6 (lower is better) Translates to: AHAVLSAARLED*LARNIFSIHNI Trigger: GATGTTGTGAATGGAGAATATGTTCCTCGCAAGTCAATCCTCAAGTCTCGCAGCCGAGAGAACAGCGTGTGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS GCA 72 bp | ATAGTTCAGACTATTGACTTGACCATTAGGGAGTCCTaGATTTCCAGCACGCCTTTTACAGCTGCTGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: IVQTIDLTIRES*ISSTPFTAAGG Trigger: GCCGCCAGCAGCTGTAAAAGGCGTGCTGGAAATGCAGGACTCCCTAATGGTCAAGTCAATAGTCTGAACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS CCA 72 bp | ATACTTCTGATGGAACTTCTTTTCGCTCTGGAATGGTaGGGAGGGCATGGTGAGCAATGGCTGAGTATGGTG | + |
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Preference number: 6 (lower is better) Translates to: ILLMELLFALEW*GGHGEQWLSMV Trigger: CACCATACTCAGCCATTGCTCACCATGCCCTCCCCACCATTCCAGAGCGAAAAGAAGTTCCATCAGAAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS CCA 72 bp | CTGATACTTCTGATGGAACTTCTTTTCGCTCTGGAATaGTGGGGAGGGCATGGTGAGCAATGGCTGAGTATG | + |
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Preference number: 6 (lower is better) Translates to: LILLMELLFALE*WGGHGEQWLSM Trigger: CATACTCAGCCATTGCTCACCATGCCCTCCCCACCATTCCAGAGCGAAAAGAAGTTCCATCAGAAGTATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS CAA 72 bp | ACGCTGTTCTCTCGGCTGCGAGACTTGAGGATTGACTaGCGAGGAACATATTCTCCATTCACAACATCCACG | + |
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Preference number: 6 (lower is better) Translates to: TLFSRLRDLRID*RGTYSPFTTST Trigger: CGTGGATGTTGTGAATGGAGAATATGTTCCTCGCAAGTCAATCCTCAAGTCTCGCAGCCGAGAGAACAGCGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS CAA 90 bp | CATGACGTCGTAAGACAGCTTGTCAGGCAAGGTCCTCAGCCTCTCTaGAAGAGCACTGTAGTCATTGTCTACTTTCTCCCAATGCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: HDVVRQLVRQGPQPL*KSTVVIVYFLPMLD Trigger: ATCCAGCATTGGGAGAAAGTAGACAATGACTACAGTGCTCTTCAAGAGAGGCTGAGGACCTTGCCTGACAAGCTGTCTTACGACGTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS CCA 72 bp | TTTCTCTTGGCAGTTAGTGACCACCAAGACATACACTaGAGCCCTCTGAGGATCGTGACTTTCCGGAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: FLLAVSDHQDIH*SPLRIVTFRKE Trigger: TTCTTTCCGGAAAGTCACGATCCTCAGAGGGCTCCAGTGTATGTCTTGGTGGTCACTAACTGCCAAGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206581.2 |
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| CDS CAA 72 bp | GTAAGACAGCTTGTCAGGCAAGGTCCTCAGCCTCTCTaGAAGAGCACTGTAGTCATTGTCTACTTTCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: VRQLVRQGPQPL*KSTVVIVYFLP Trigger: TGGGAGAAAGTAGACAATGACTACAGTGCTCTTCAAGAGAGGCTGAGGACCTTGCCTGACAAGCTGTCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085513.6 ENSMUST00000206327.2 ENSMUST00000206581.2 |
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| CDS CAA 90 bp | AGCACTGTAGTCATTGTCTACTTTCTCCCAATGCTGGATTTTCTCTaGGCAGTTAGTGACCACCAAGACATACACTGGAGCCCTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: STVVIVYFLPMLDFL*AVSDHQDIHWSPLR Trigger: CCTCAGAGGGCTCCAGTGTATGTCTTGGTGGTCACTAACTGCCAAGAGAAAATCCAGCATTGGGAGAAAGTAGACAATGACTACAGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206581.2 |
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