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Pregenerated sensors for URB1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039929

Ensembl transcript IDs: ENSMUST00000140920.2

Found 431 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTAGCTCCTCTGTCAGGGCCTTCAGGGGAGGGGACGGCAGACATCTaGGACCTCCATGGTCCTCACGGCCTGGCAGTGCCTCAGTCACTA +
Preference number: 1 (lower is better)
Translates to: LAPLSGPSGEGTADI*DLHGPHGLAVPQSL
Trigger: TAGTGACTGAGGCACTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTGAAGGCCCTGACAGAGGAGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
3UTR TCA 72 bp CTGTCAGGGCCTTCAGGGGAGGGGACGGCAGACATCTaGGACCTCCATGGTCCTCACGGCCTGGCAGTGCCT +
Preference number: 3 (lower is better)
Translates to: LSGPSGEGTADI*DLHGPHGLAVP
Trigger: AGGCACTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTGAAGGCCCTGACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
3UTR CCA 72 bp TTCAGGGGAGGGGACGGCAGACATCTGAGACCTCCATaGTCCTCACGGCCTGGCAGTGCCTCAGTCACTAGA +
Preference number: 3 (lower is better)
Translates to: FRGGDGRHLRPP*SSRPGSASVTR
Trigger: TCTAGTGACTGAGGCACTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp CAGGGGAGGGGACGGCAGACATCTGAGACCTCCATGGTCCTCACGGCCTGGCAGGGGGGTCGTAGCTGCTaGGGGCTGCCACAGTTAAAC +
Preference number: 4 (lower is better)
Translates to: QGRGRQTSETSMVLTAWQGGRSC*GLPQLN
Trigger: GTTTAACTGTGGCAGCCCTCAGCAGCTACGACCCCC...CTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp CAGGGGAGGGGACGGCAGACATCTGAGACCTCCATGGTCCTCACGGCCTGGCAGGAAGAACCCCTGCACTaGAGTGGGCTGCTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: QGRGRQTSETSMVLTAWQEEPLH*SGLLGA
Trigger: AGCTCCTAGCAGCCCACTTCAGTGCAGGGGTTCTTC...CTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp CAGGGGAGGGGACGGCAGACATCTGAGACCTCCATGGTCCTCACGGCCTGGCAGCTTGTGATGTTCCACTaGTGCTGGGCCCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: QGRGRQTSETSMVLTAWQLVMFH*CWAPQQ
Trigger: CTGCTGTGGGGCCCAGCAGCAGTGGAACATCACAAG...CTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp CAGGGGAGGGGACGGCAGACATCTGAGACCTCCATGGTCCTCACGGCCTGGCAGTCCAGCCGCTCAGCGTaGATGACCAGCTGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: QGRGRQTSETSMVLTAWQSSRSA*MTSCLR
Trigger: CCTTAAGCAGCTGGTCATCCACGCTGAGCGGCTGGA...CTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGGCCGACCTGGCCAGGTaGCTGGCTTCTCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALADLAR*LASLLR
Trigger: CCGGAGGAGAGAAGCCAGCCACCTGGCCAGGTCGGC...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp CAGGGGAGGGGACGGCAGACATCTGAGACCTCCATGGTCCTCACGGCCTGGCAGTTGAGTGATGGCTTCTaGGTACTTTGCCAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QGRGRQTSETSMVLTAWQLSDGF*VLCQKA
Trigger: GGCCTTCTGGCAAAGTACTCAGAAGCCATCACTCAA...CTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp CAGGGGAGGGGACGGCAGACATCTGAGACCTCCATGGTCCTCACGGCCTGGCAGGAAGGCCCAGTGATATaGAAGAACCTGTCTCGCACT +
Preference number: 4 (lower is better)
Translates to: QGRGRQTSETSMVLTAWQEGPVI*KNLSRT
Trigger: AGTGCGAGACAGGTTCTTTCATATCACTGGGCCTTC...CTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp CAGGGGAGGGGACGGCAGACATCTGAGACCTCCATGGTCCTCACGGCCTGGCAGTGGGTGAGCATCATGTaGACCACTGAAAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: QGRGRQTSETSMVLTAWQWVSIM*TTESWT
Trigger: TGTCCAGCTTTCAGTGGTCCACATGATGCTCACCCA...CTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGGCCTCTAGCTTCTGCTaGTTCTGGGCGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALASSFC*FWASSR
Trigger: GCGGCTGGACGCCCAGAACCAGCAGAAGCTAGAGGC...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp CAGGGGAGGGGACGGCAGACATCTGAGACCTCCATGGTCCTCACGGCCTGGCAGCAGAAGAATTGTTTCTaGAACATCATGCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QGRGRQTSETSMVLTAWQQKNCF*NIMLGS
Trigger: GCTGCCCAGCATGATGTTGCAGAAACAATTCTTCTG...CTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp CAGGGGAGGGGACGGCAGACATCTGAGACCTCCATGGTCCTCACGGCCTGGCAGAAGTCAAAGTTGTACTaGATGATCACGTGGGGAACG +
Preference number: 4 (lower is better)
Translates to: QGRGRQTSETSMVLTAWQKSKLY*MITWGT
Trigger: CGTTCCCCACGTGATCATGCAGTACAACTTTGACTT...CTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGTTCCAAAGCCGGTCCTaGGCCCTGCGCATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALFQSRS*ALRILQ
Trigger: CTGAAGGATGCGCAGGGCCCAGGACCGGCTTTGGAA...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGCGAGGTCCCTCACCATaGCTTTCCCCGCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALRGPSP*LSPPLQ
Trigger: CTGAAGAGGCGGGGAAAGCCATGGTGAGGGACCTCG...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGTCACCGGGCCCCCAGTaGGTCAGTGTGGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQSPGPQ*VSVALR
Trigger: CCTGAGGGCCACACTGACCCACTGGGGGCCCGGTGA...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGATGGGCGGGACCTCCTaGGAAGGGCCCTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQMGGTS*EGPCSE
Trigger: CTCTGAGCAGGGCCCTTCTCAGGAGGTCCCGCCCAT...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp CAGGGGAGGGGACGGCAGACATCTGAGACCTCCATGGTCCTCACGGCCTGGCAGATATGGTTCAGAAACTaGCCAGTAAAGAAACGCACC +
Preference number: 4 (lower is better)
Translates to: QGRGRQTSETSMVLTAWQIWFRN*PVKKRT
Trigger: GGTGCGTTTCTTTACTGGGCAGTTTCTGAACCATAT...CTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGGCTGCCAAAGTGACTTaGCCAGGCTCCGGCATGTCT +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALAAKVT*PGSGMS
Trigger: AGACATGCCGGAGCCTGGGCAAGTCACTTTGGCAGC...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TTAATACCAATCCATGACCAACCAGCACCTAGCTCCTCTGTCAGGGCCTTCAGGAGCTTCTGCTGGTTCTaGGCGTCCAGCCGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: LIPIHDQPAPSSSVRAFRSFCWF*ASSRSA
Trigger: CGCTGAGCGGCTGGACGCCCAGAACCAGCAGAAGCT...CCTGAAGGCCCTGACAGAGGAGCTAGGTGCTGGTTGGTCATGGATTGGTATTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGATGTTCCACTGCTGCTaGGCCCCACAGCAGAACCCT +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALMFHCC*APQQNP
Trigger: AGGGTTCTGCTGTGGGGCCCAGCAGCAGTGGAACAT...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGGCGGGAAGTGCAGGATaGTCTGCATCATCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALAGSAG*SASSGL
Trigger: CAGACCGGATGATGCAGACCATCCTGCACTTCCCGC...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGAGCGTTCTCCTCCAATaGTTTCTGCCTCGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALSVLLQ*FLPRGL
Trigger: AAGGCCCCGAGGCAGAAATCATTGGAGGAGAACGCT...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp TTAATACCAATCCATGACCAACCAGCACCTAGCTCCTCTGTCAGGGCCTTCAGGCAGTACCTGCTTGGCTaGGCGCAGCATGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LIPIHDQPAPSSSVRAFRQYLLG*AQHVLQ
Trigger: CTGCAGCACATGCTGCGCTCAGCCAAGCAGGTACTG...CCTGAAGGCCCTGACAGAGGAGCTAGGTGCTGGTTGGTCATGGATTGGTATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp TTAATACCAATCCATGACCAACCAGCACCTAGCTCCTCTGTCAGGGCCTTCAGGCTCTGCCAAGGCTGCTaGGACAGAGTCAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LIPIHDQPAPSSSVRAFRLCQGC*DRVSQG
Trigger: ACCCTGGCTGACTCTGTCTCAGCAGCCTTGGCAGAG...CCTGAAGGCCCTGACAGAGGAGCTAGGTGCTGGTTGGTCATGGATTGGTATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGGCTCCCTGCCACTaGAGGACACAGCCAGCCACT +
Preference number: 4 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQLAPCH*RTQPAT
Trigger: AGTGGCTGGCTGTGTCCTTCAGTGGCAGGGAGCCAG...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGAGGTACAGCAGTACCTaGTTGGCTGAGCGCAGCATG +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALRYSST*LAERSM
Trigger: CATGCTGCGCTCAGCCAAGCAGGTACTGCTGTACCT...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGCTGTTTGCAGCAGCGTaGAGAAGCAGGAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALLFAAA*RSRKMA
Trigger: CGCCATCTTCCTGCTTCTCCACGCTGCTGCAAACAG...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGCCCAGTGGGTCAGTGTaGCCCTCAGGAGGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GSASVTRSDYKGLLVGQLPSGSV*PSGGPC
Trigger: GCAAGGACCTCCTGAGGGCCACACTGACCCACTGGG...CAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp TTAATACCAATCCATGACCAACCAGCACCTAGCTCCTCTGTCAGGGCCTTCAGGCCTGGCTTCCAGAGCTaGAGGGACCAGAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: LIPIHDQPAPSSSVRAFRPGFQS*RDQSTE
Trigger: TTCAGTGCTCTGGTCCCTGCAGCTCTGGAAGCCAGG...CCTGAAGGCCCTGACAGAGGAGCTAGGTGCTGGTTGGTCATGGATTGGTATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp CAGGGGAGGGGACGGCAGACATCTGAGACCTCCATGGTCCTCACGGCCTGGCAGGAGTCTCTACAAATCTaGTCTCAAGGATGTGTAAAA +
Preference number: 4 (lower is better)
Translates to: QGRGRQTSETSMVLTAWQESLQI*SQGCVK
Trigger: TTTTACACATCCTTGAGAGCAGATTTGTAGAGACTC...CTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGAAGGTGGGCCTCAGGTaGTTTGTAAGCGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALKVGLR*FVSAMR
Trigger: CCTCATTGCGCTTACAAAGCACCTGAGGCCCACCTT...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGGAGTCTTGTGACCTCTaGCCTGCTGACAGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQESCDL*PADRAL
Trigger: GAGCGCCCTGTCAGCAGGGCAGAGGTCACAAGACTC...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TTAATACCAATCCATGACCAACCAGCACCTAGCTCCTCTGTCAGGGCCTTCAGGAGCTGCACACATCTCTaGCAGCTTCAGGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: LIPIHDQPAPSSSVRAFRSCTHL*QLQDPG
Trigger: CCCAGGGTCCTGAAGCTGCCAGAGATGTGTGCAGCT...CCTGAAGGCCCTGACAGAGGAGCTAGGTGCTGGTTGGTCATGGATTGGTATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp CAGGGGAGGGGACGGCAGACATCTGAGACCTCCATGGTCCTCACGGCCTGGCAGTCTTTGTCCAGACAGTaGTCAACTGTTTTTAATGCT +
Preference number: 4 (lower is better)
Translates to: QGRGRQTSETSMVLTAWQSLSRQ*STVFNA
Trigger: AGCATTAAAAACAGTTGACCACTGTCTGGACAAAGA...CTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGGCGCCCAGAGCTTTCTaGACCATACAGGAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALAPRAF*TIQELC
Trigger: ACAAAGCTCCTGTATGGTCCAGAAAGCTCTGGGCGC...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGCATCATCCGGTCTaGGTCCAGCAGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQLHHPV*VQQAED
Trigger: ATCCTCCGCCTGCTGGACCCAGACCGGATGATGCAG...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCTCCTGGGAGCCGACCTaGCCAGGTGGCTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPSWEPT*PGGWLL
Trigger: GAGAAGCCAGCCACCTGGCCAGGTCGGCTCCCAGGA...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGTGGGTAAATGGTCCATaGGGACATGCAGATCCTTGG +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALWVNGP*GHADPW
Trigger: CCAAGGATCTGCATGTCCTCATGGACCATTTACCCA...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp CAGGGGAGGGGACGGCAGACATCTGAGACCTCCATGGTCCTCACGGCCTGGCAGTGCTTTTTAAATGACTaGCAAACCCAAATAACAGTG +
Preference number: 4 (lower is better)
Translates to: QGRGRQTSETSMVLTAWQCFLND*QTQITV
Trigger: CACTGTTATTTGGGTTTGGCAGTCATTTAAAAAGCA...CTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCTGCGCTCCTCTGCAGTaGTGTCCAGGTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPCAPLQ*CPGAPA
Trigger: GGCTGGAGCACCTGGACAGCACTGCAGAGGAGCGCA...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp GGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGTTCTTGCAAATGGAATaGGCTGGGCCAGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GSASVTRSDYKGLLVGQLFLQME*AGPGPP
Trigger: TGGAGGCCCTGGCCCAGCTCATTCCATTTGCAAGAA...CAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCGCCGGTCCTGGGCCCTaGGCATCCTTCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFAGPGP*ASFSRV
Trigger: GACCCTGCTGAAGGATGCGCAGGGCCCAGGACCGGC...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGAGCGGCGAGAAGCTGTaGCTGAACACTCTTATCCCC +
Preference number: 4 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQSGEKL*LNTLIP
Trigger: GGGGATAAGAGTGTTCAGGCACAGCTTCTCGCCGCT...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGGGAGCAGCTTATTCCTaGCTTCCAGAGCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GSASVTRSDYKGLLVGQLGAAYS*LPELQG
Trigger: TCCCTGCAGCTCTGGAAGCCAGGAATAAGCTGCTCC...CAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGGGAGAAGCAGGAAGATaGCGGGAGTGTACATGGTCC +
Preference number: 4 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQGEAGR*RECTWS
Trigger: GGACCATGTACACTCCCGCCATCTTCCTGCTTCTCC...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGAAAAACAGAGAGTGCTaGGTGAGCATCATGTGGACC +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALKNREC*VSIMWT
Trigger: GGTCCACATGATGCTCACCCAGCACTCTCTGTTTTT...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTCGTGGGCCTCGGGCCTaGGCAGCTACCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPRGPRA*AATTGL
Trigger: CAGGCCTGTGGTAGCTGCCCAGGCCCGAGGCCCACG...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCCGCAGGGCCTCCAGCTaGGGCAGAGTCTTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFRRASS*GRVLGV
Trigger: AACGCCCAAGACTCTGCCTCAGCTGGAGGCCCTGCG...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp GGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGCCTTCAAGACAGGAGTaGCAGCAGAGGATACTCCTG +
Preference number: 4 (lower is better)
Translates to: GSASVTRSDYKGLLVGQLPSRQE*QQRILL
Trigger: CAGGAGTATCCTCTGCTGTCACTCCTGTCTTGAAGG...CAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGGCAAGAGTGTCAGGTTaGCTCCTCTGCCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQARVSG*LLCQKF
Trigger: GAACTTCTGGCAGAGGAGGCAACCTGACACTCTTGC...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp TTAATACCAATCCATGACCAACCAGCACCTAGCTCCTCTGTCAGGGCCTTCAGGCAGCAGGAGTCTTGCTaGTGCTCTTCTTCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LIPIHDQPAPSSSVRAFRQQESC*CSSSLS
Trigger: AGAAAGGGAAGAAGAGCAGCAGCAAGACTCCTGCTG...CCTGAAGGCCCTGACAGAGGAGCTAGGTGCTGGTTGGTCATGGATTGGTATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCTTCCCCATAGAGGCCTaGAGGGTGCTGGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPFPIEA*RVLASW
Trigger: CCAAGAAGCCAGCACCCTGCAGGCCTCTATGGGGAA...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGAGGACATAGTAGGCTaGAGCTCGCATCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPEDIVG*SSHLGV
Trigger: GACCCCCAGATGCGAGCTGCAGCCTACTATGTCCTC...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp GGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAGGAGTCCACGTTCCTaGAGAGCACAACAATGGCCT +
Preference number: 4 (lower is better)
Translates to: GSASVTRSDYKGLLVGQLRSPRS*RAQQWP
Trigger: AGGCCATTGTTGTGCTCTGCAGGAACGTGGACTCCT...CAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCCATGCTCAGCCAGAGTaGGGAGCAGAGCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFHAQPE*GAEPPG
Trigger: GCCTGGGGGCTCTGCTCCCCACTCTGGCTGAGCATG...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp ACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAATAAAGTCCTCTTAGGTGCTCCTGCAAGGTaGGCCCCACACCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TRSDYKGLLVGQLNKVLLGAPAR*APHQAA
Trigger: GGCAGCCTGGTGTGGGGCCCACCTTGCAGGAGCACC...TAAGAGGACTTTATTCAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TTAATACCAATCCATGACCAACCAGCACCTAGCTCCTCTGTCAGGGCCTTCAGGGGTGTTTTCATCTTCTaGCTCCCTGCCACTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LIPIHDQPAPSSSVRAFRGVFIF*LPATEG
Trigger: TCCTTCAGTGGCAGGGAGCCAGAAGATGAAAACACC...CCTGAAGGCCCTGACAGAGGAGCTAGGTGCTGGTTGGTCATGGATTGGTATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGTGGACCACTGAAAGCTaGACAAGTTTCGTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: GSASVTRSDYKGLLVGQLWTTES*TSFVRP
Trigger: TGGGCGCACGAAACTTGTCCAGCTTTCAGTGGTCCA...CAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTTTGTTGCCCAGGTTaGTCACCCACAGGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQLCCPG*SPTGCV
Trigger: TACACACCCTGTGGGTGACCAACCTGGGCAACAAAG...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp ACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAATAAAGTCCTCTTAAGGCCCAGGAGGGACTaGAGCAGAGCTGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: TRSDYKGLLVGQLNKVLLRPRRD*SRAGPT
Trigger: TGTGGGCCCAGCTCTGCTTCAGTCCCTCCTGGGCCT...TAAGAGGACTTTATTCAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGCAGGTCATCACCAGCTaGAGTTTTCAAACTCAACAA +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALQVITS*SFQTQQ
Trigger: TTGTTGAGTTTGAAAACTGCAGCTGGTGATGACCTG...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCGCAGGAGGCTGGCAATaGCCAGGGCTGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFAGGWQ*PGLSVS
Trigger: GGACACAGACAGCCCTGGGCATTGCCAGCCTCCTGC...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TTAATACCAATCCATGACCAACCAGCACCTAGCTCCTCTGTCAGGGCCTTCAGGGCTTCTTCACAATGTTaGCACCCACCACGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LIPIHDQPAPSSSVRAFRASSQC*HPPRGN
Trigger: ATTTCCACGTGGTGGGTGCCAACATTGTGAAGAAGC...CCTGAAGGCCCTGACAGAGGAGCTAGGTGCTGGTTGGTCATGGATTGGTATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TTAATACCAATCCATGACCAACCAGCACCTAGCTCCTCTGTCAGGGCCTTCAGGAGTTCCCCAAAGAGATaGAGAAGAAAGCAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: LIPIHDQPAPSSSVRAFRSSPKR*RRKQGS
Trigger: TGACCCCTGCTTTCTTCTCCATCTCTTTGGGGAACT...CCTGAAGGCCCTGACAGAGGAGCTAGGTGCTGGTTGGTCATGGATTGGTATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp ACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAATAAAGTCCTCTTAACCTGGCCAGGTGGCTaGCTTCTCTCCTCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: TRSDYKGLLVGQLNKVLLTWPGG*LLSSGA
Trigger: AGCGCCGGAGGAGAGAAGCCAGCCACCTGGCCAGGT...TAAGAGGACTTTATTCAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCTCTGGTCCAGCACACTaGGGGTGGCACTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFSGPAH*GWHCRS
Trigger: GGACCTACAGTGCCACCCTCAGTGTGCTGGACCAGA...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGTGGCTGCTGCCAAAGTaGCTTGCCCAGGCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQWLLPK*LAQAPA
Trigger: TGCCGGAGCCTGGGCAAGTCACTTTGGCAGCAGCCA...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGGCTGAGCGCAGCATGTaGTGCAGAGCCAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQAERSM*CRARLG
Trigger: CCCAAGCCTGGCTCTGCAGCACATGCTGCGCTCAGC...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGTCCTCCAGCCCTCCATaGCTCCTCTTCCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQSSSPP*LLFRPR
Trigger: ACGAGGCCGGAAGAGGAGGCATGGAGGGCTGGAGGA...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCTTTCTCCAAGCAAGATaGTTCCAGCTGGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPFLQAR*FQLGLS
Trigger: GCTGAGCCCCAGCTGGAAGCATCTTGCTTGGAGAAA...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCAGAGGAGCTTCATGTaGTTGTACAGCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQQRSFM*LYSSFF
Trigger: GAAGAAGCTGCTGTACAACCACATGAAGCTCCTCTG...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCCTTTGAATCCCTCTTaGTCACCAAGGCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQPLNPS*SPRQTR
Trigger: CCTTGTTTGCCTTGGTGACCAAGAGGGATTCAAAGG...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TTAATACCAATCCATGACCAACCAGCACCTAGCTCCTCTGTCAGGGCCTTCAGGGAACTGGTAGAAGCCTaGCAGTTTGTCCATGTTCAA +
Preference number: 4 (lower is better)
Translates to: LIPIHDQPAPSSSVRAFRELVEA*QFVHVQ
Trigger: TTGAACATGGACAAACTGCCAGGCTTCTACCAGTTC...CCTGAAGGCCCTGACAGAGGAGCTAGGTGCTGGTTGGTCATGGATTGGTATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCCTCTCTTTCCGGCCCTaGGCCACCAACAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFLSFRP*ATNNCS
Trigger: GCTGCAGTTGTTGGTGGCCCAGGGCCGGAAAGAGAG...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGTCACTGCTCTGCAGCTaGTCCTGGTGGCTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQSLLCS*SWWLLA
Trigger: GGCAAGCAGCCACCAGGATCAGCTGCAGAGCAGTGA...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGTTGAGCATGTGGTGCTaGAGGATGGGCGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQLSMWC*RMGGTS
Trigger: GGAGGTCCCGCCCATCCTGCAGCACCACATGCTCAA...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp GGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGGATGCTGACATCATCTaGATCTTGCTTCCCCATAGA +
Preference number: 4 (lower is better)
Translates to: GSASVTRSDYKGLLVGQLDADII*ILLPHR
Trigger: TCTATGGGGAAGCAAGATGCAGATGATGTCAGCATC...CAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGGCGTGGATGACCAGCTaGTTAAGGAGGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQAWMTS*LRRPRR
Trigger: CCTCCTGGGCCTCCTTAAGCAGCTGGTCATCCACGC...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGCAGCTTCCGGTACTaGGGGAAGTGCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFSSFRY*GKCRMV
Trigger: GACCATCCTGCACTTCCCGCAGTACCGGAAGCTGCT...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCTCCCCACTCAGGAGCTaGAAAATCTCTGCACATTCC +
Preference number: 4 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPSPLRS*KISAHS
Trigger: GGAATGTGCAGAGATTTTCCAGCTCCTGAGTGGGGA...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCCATCGCCAGGAGCCTTaGCAATGGGATAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPHRQEP*QWDKLS
Trigger: AGAGAGTTTATCCCATTGCCAAGGCTCCTGGCGATG...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTTGTGGTGCTGCAGGATaGGCGGGACCTCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPCGAAG*AGPPEK
Trigger: CTTCTCAGGAGGTCCCGCCCATCCTGCAGCACCACA...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTATGGTCCTGAGCTGCTaGACACCTGCAGCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPMVLSC*TPAAAR
Trigger: CCTTGCCGCTGCAGGTGTCCAGCAGCTCAGGACCAT...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTACTGCAGAGCCAGGCTTaGGACAGCGGCGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLLQSQA*DSGEKL
Trigger: CAGCTTCTCGCCGCTGTCCCAAGCCTGGCTCTGCAG...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGACTGAAGCAGAGCTaGGCCCACACTTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPGLKQS*AHTSAQ
Trigger: CTGGGCAGAAGTGTGGGCCCAGCTCTGCTTCAGTCC...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCCAGAAGGCCCAACTaGCCCAGTTTATGGAGAATT +
Preference number: 4 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPARRPN*PSLWRI
Trigger: AATTCTCCATAAACTGGGCCAGTTGGGCCTTCTGGC...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGCTGCAGGAGCTCGTTTaGCTTCTTCCTTTTCATTCA +
Preference number: 4 (lower is better)
Translates to: GSASVTRSDYKGLLVGQLLQELV*LLPFHS
Trigger: TGAATGAAAAGGAAGAAGCCAAACGAGCTCCTGCAG...CAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTAAGGTATCTGGCTGCTaGGCCCCCAGCCACATGTCC +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPKVSGC*APSHMS
Trigger: GGACATGTGGCTGGGGGCCCAGCAGCCAGATACCTT...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGAGTGTACATGGTCCTaGGCTGCTGGACACCTGCAG +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPECTWS*AAGHLQ
Trigger: CTGCAGGTGTCCAGCAGCTCAGGACCATGTACACTC...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGGAGTCTTCAAAAAGGTaGGGTCATGGTACCGAAATT +
Preference number: 4 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQESSKR*GHGTEI
Trigger: AATTTCGGTACCATGACCTCACCTTTTTGAAGACTC...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCACAGAGAGTGCTGGGTaGGCATCATGTGGACCACTG +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFTESAG*ASCGPL
Trigger: CAGTGGTCCACATGATGCTCACCCAGCACTCTCTGT...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGAGTCAAGCACTGGGCTaGGGAGTCCACGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQSQALG*GVHVPA
Trigger: TGCAGGAACGTGGACTCCTCAGCCCAGTGCTTGACT...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp TTAATACCAATCCATGACCAACCAGCACCTAGCTCCTCTGTCAGGGCCTTCAGGGAGCTGGAAAATCTCTaGACATTCCATGGAAATCTT +
Preference number: 4 (lower is better)
Translates to: LIPIHDQPAPSSSVRAFRELENL*TFHGNL
Trigger: AAGATTTCCATGGAATGTGCAGAGATTTTCCAGCTC...CCTGAAGGCCCTGACAGAGGAGCTAGGTGCTGGTTGGTCATGGATTGGTATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGAAACTCAACAAGAAGTaGAAGAGTGTCAGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQKLNKK*KSVRLP
Trigger: AGGCAACCTGACACTCTTGCACTTCTTGTTGAGTTT...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGTCCTCCTTAATCTCTTaGTTTTTAAATGACTGCCAA +
Preference number: 4 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALSSLIS*FLNDCQ
Trigger: TTGGCAGTCATTTAAAAAGCAAGAGATTAAGGAGGA...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTAACCTTGAGCATGTGGTaGTGCAGGATGGGCGGGACC +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLTLSMW*CRMGGT
Trigger: GGTCCCGCCCATCCTGCAGCACCACATGCTCAAGGT...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAAGTGCAGGATGGTCTaGATCATCCGGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFKCRMV*IIRSGS
Trigger: GGACCCAGACCGGATGATGCAGACCATCCTGCACTT...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCAACTCACTGACCATGTaGAAGGCAAGCATCTTCTCG +
Preference number: 4 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPNSLTM*KASIFS
Trigger: CGAGAAGATGCTTGCCTTGCACATGGTCAGTGAGTT...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp GGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAAAGAAACAGCAGCATaGGCAGAGCTCAGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: GSASVTRSDYKGLLVGQLKETAA*AELSVL
Trigger: TAAAACACTGAGCTCTGCGCATGCTGCTGTTTCTTT...CAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCCCTGCGGTAGCTTCTTaGCAGCAGAGACGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFPAVAS*QQRRRL
Trigger: AAGCCTTCGTCTCTGCTGCCAAGAAGCTACCGCAGG...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGGCAGCTTCAGGACCCTaGGTCACCATGGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQAASGP*VTMAVI
Trigger: GATGACTGCCATGGTGACCCAGGGTCCTGAAGCTGC...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCGGCCGGGGAAATCTCTaGCTGGGCCTCATAGATCTT +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFGRGNL*LGLIDL
Trigger: AAGATCTATGAGGCCCAGCCAGAGATTTCCCCGGCC...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCAGGGTGCTGGCTTCTTaGACAAACTCAGAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPRVLAS*TNSEAL
Trigger: CAAAGCTTCTGAGTTTGTCCAAGAAGCCAGCACCCT...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTAGCTAGGGGGTCCCTCTaGGTATGGAGAAGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLARGSL*VWRRSV
Trigger: GACCGACCTTCTCCATACCCAGAGGGACCCCCTAGC...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCAACTGGCCCAGTTTATaGAGAATTGGGGAACTTGCC +
Preference number: 4 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPNWPSL*RIGELA
Trigger: GGCAAGTTCCCCAATTCTCCATAAACTGGGCCAGTT...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTAGACTGTGTGCCTTGCTaGGTCAGCAGGTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLDCVPC*VSRWAS
Trigger: AGAGGCCCACCTGCTGACCCAGCAAGGCACACAGTC...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGACTGAAGCAGGAGGCTaGCAATGCCCAGGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQTEAGG*QCPGLS
Trigger: AGACAGCCCTGGGCATTGCCAGCCTCCTGCTTCAGT...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCGTCCTTAAACACCAGTaGCTCCCCTGTGTCCTCCGT +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFVLKHQ*LPCVLR
Trigger: ACGGAGGACACAGGGGAGCCACTGGTGTTTAAGGAC...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTTTCAGCTCTCCTTaGAGCTTCGTGTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPAFSSP*SFVSLS
Trigger: TGAAAGAGACACGAAGCTCCAAGGAGAGCTGAAAGC...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTCAAGATGCTTCCAGCTaGGGCTCAGCAGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPQDASS*GSAVSS
Trigger: GGAGGAGACTGCTGAGCCCCAGCTGGAAGCATCTTG...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTACTCCGGCATGTCTTGTaGTGTTCCACTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLLRHVL*CSTAAG
Trigger: CCCAGCAGCAGTGGAACATCACAAGACATGCCGGAG...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCTCAAATCCAAAGAGCTaGACACATCTCTGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPSNPKS*THLWQL
Trigger: AAGCTGCCAGAGATGTGTGCAGCTCTTTGGATTTGA...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp ACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAATAAAGTCCTCTTAAAGGCCTCTTGGGCTTaGGCAGGAATCCAGAGACTG +
Preference number: 4 (lower is better)
Translates to: TRSDYKGLLVGQLNKVLLKASWA*AGIQRL
Trigger: CAGTCTCTGGATTCCTGCGCAAGCCCAAGAGGCCTT...TAAGAGGACTTTATTCAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTATCCTGGTGGCTGCTTaGCAGCAGTTGTACCAGGGT +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPILVAA*QQLYQG
Trigger: ACCCTGGTACAACTGCTGGCAAGCAGCCACCAGGAT...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGGCTGGACAAGTTTCGTaGGCCCAGAGCTTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQAGQVS*AQSFLD
Trigger: GTCCAGAAAGCTCTGGGCGCACGAAACTTGTCCAGC...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTAGTGATGTTCCACTGCTaGTGGGCCCCACAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLVMFHC*WAPQQN
Trigger: GTTCTGCTGTGGGGCCCAGCAGCAGTGGAACATCAC...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGCGGTACTGCGGGAAGTaGAGGATGGTCTGCATCATC +
Preference number: 4 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQRYCGK*RMVCII
Trigger: GATGATGCAGACCATCCTGCACTTCCCGCAGTACCG...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGACACCAGAGGCACTGTaGTCACCATCACCATCGCCA +
Preference number: 4 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQTPEAL*SPSPSP
Trigger: TGGCGATGGTGATGGTGACCACAGTGCCTCTGGTGT...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGGGGTCCCTCTGGGTATaGAGAAGGTCGGTCAACACT +
Preference number: 4 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQGSLWV*RRSVNT
Trigger: AGTGTTGACCGACCTTCTCCATACCCAGAGGGACCC...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp ACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAATAAAGTCCTCTTAACCCCTGCACTGAAGTaGGCTGCTAGGAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: TRSDYKGLLVGQLNKVLLTPALK*AARSFT
Trigger: TGTGAAGCTCCTAGCAGCCCACTTCAGTGCAGGGGT...TAAGAGGACTTTATTCAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTAGCAAATGGAATGAGCTaGGCCAGGGCCTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLANGMS*ARASRC
Trigger: GCATCTGGAGGCCCTGGCCCAGCTCATTCCATTTGC...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCCAAAGTTGTACTGCATaGTCACGTGGGGAACGACCT +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFQSCTA*SRGERP
Trigger: AGGTCGTTCCCCACGTGATCATGCAGTACAACTTTG...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCCTTTTAGGAGCTTGCTaGAGTCAAAGTTGTACTGCA +
Preference number: 4 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPLLGAC*SQSCTA
Trigger: TGCAGTACAACTTTGACTTCAGCAAGCTCCTAAAAG...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTTCAGGTTGCCTCCTCTaGCAGAAGTTCCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPSGCLL*QKFPKR
Trigger: CCTCTTTGGGAACTTCTGGCAGAGGAGGCAACCTGA...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTCTTCCTTGCGCCCTGTaGTGGAGGTACACATGGATA +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPLPCAL*WRYTWI
Trigger: TATCCATGTGTACCTCCAGCACAGGGCGCAAGGAAG...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp ACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAATAAAGTCCTCTTAGTCTTCACAAACTGCTaGCAGTCACCAGGGTCAACC +
Preference number: 4 (lower is better)
Translates to: TRSDYKGLLVGQLNKVLLVFTNC*QSPGST
Trigger: GGTTGACCCTGGTGACTGGCAGCAGTTTGTGAAGAC...TAAGAGGACTTTATTCAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCCCAGGACTTGTCCAATaGTGTTGTCATCACCCGCAA +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFPGLVQ*CCHHPQ
Trigger: TTGCGGGTGATGACAACACCATTGGACAAGTCCTGG...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCTTCTTCCCTTTCTCATaGTCCTCCTTAATCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPFFPFS*SSLISC
Trigger: GCAAGAGATTAAGGAGGACCATGAGAAAGGGAAGAA...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTAAGGCCTGCAGGGTGCTaGCTTCTTGGACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLRPAGC*LLGQTQ
Trigger: CTGAGTTTGTCCAAGAAGCCAGCACCCTGCAGGCCT...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCATCCACCACAAACTCTaGCCTGGTCAGTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFIHHKL*PGQFPK
Trigger: TTTGGGGAACTGACCAGGCCAGAGTTTGTGGTGGAT...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTAACCGAAGCACCCAGCTaGCCACCAAAGAAACAGCAG +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLTEAPS*PPKKQQ
Trigger: CTGCTGTTTCTTTGGTGGCCAGCTGGGTGCTTCGGT...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCCAGTCATATATGCCATaGTGCTTTCCCCTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFQSYMP*CFPLLH
Trigger: GTGAAGCAGGGGAAAGCATCATGGCATATATGACTG...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp ACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAATAAAGTCCTCTTAGGAGCTTTGTGGCACTaGGCAGAGTCTTCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: TRSDYKGLLVGQLNKVLLGALWH*AESSKR
Trigger: CCTTTTTGAAGACTCTGCTCAGTGCCACAAAGCTCC...TAAGAGGACTTTATTCAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCACAGCAGGAACTTGCTaGTCTTCCAGTACATGTGCT +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFTAGTC*SSSTCA
Trigger: AGCACATGTACTGGAAGATCAGCAAGTTCCTGCTGT...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGCAAAATGTGGCTCTTaGGCCAGTCAAGGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPAKCGS*ASQGVL
Trigger: CAAGACTCCTTGACTGGCTCAAGAGCCACATTTTGC...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp ACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAATAAAGTCCTCTTATCACACATGTCTTCCTaGGGTAGCTTCTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: TRSDYKGLLVGQLNKVLLSHMSS*GSFLAA
Trigger: TGCTGCCAAGAAGCTACCGCAGGAAGACATGTGTGA...TAAGAGGACTTTATTCAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTACCTGTCTTCACAAACTaGTGCCAGTCACCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLPVFTN*CQSPGS
Trigger: TGACCCTGGTGACTGGCAGCAGTTTGTGAAGACAGG...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGGTGCTGCTCAATGACTaGTTTCAGCTCTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQVLLND*FQLSLE
Trigger: CTCCAAGGAGAGCTGAAAGCAGTCATTGAGCAGCAC...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp ACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAATAAAGTCCTCTTACCCTCAGGAGGTCCTTaGATTTCTCCAAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: TRSDYKGLLVGQLNKVLLPSGGP*ISPSKM
Trigger: CATCTTGCTTGGAGAAATGCAAGGACCTCCTGAGGG...TAAGAGGACTTTATTCAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTACGAGGCCCTGGGCACTaGAGTGATGATTATACAGCT +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLRGPGH*SDDYTA
Trigger: AGCTGTATAATCATCACTGCAGTGCCCAGGGCCTCG...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGCAGGAGCCTTGGCAATaGGATAAACTCTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQQEPWQ*DKLSGP
Trigger: TGGACCAGAGAGTTTATCCCATTGCCAAGGCTCCTG...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTAGGCTGTGGCAAAATGTaGCTCTTGAGCCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLGCGKM*LLSQSR
Trigger: CCTTGACTGGCTCAAGAGCCACATTTTGCCACAGCC...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGCTTTGTCCGTGTATaGGTAAGGATTCATCACCAG +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFSFVRV*VRIHHQ
Trigger: CTGGTGATGAATCCTTACTCATACACGGACAAAGCT...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGGGGTCTTTCCAAGACTaGTTAAGTGTCTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQGSFQD*LSVSPS
Trigger: GGAAGGAGAGACACTTAAGCAGTCTTGGAAAGACCC...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGCAGATCCTTGGTTCTTaGAAATGGAATGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQQILGS*KWNELG
Trigger: GCCCAGCTCATTCCATTTGCAAGAACCAAGGATCTG...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTGGTCCATGAGGACATaGAGATCCTTGGTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQWSMRT*RSLVLA
Trigger: TGCAAGAACCAAGGATCTGCATGTCCTCATGGACCA...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCTATCGCAGCACTTTCTaGCTTTTCTGGAGTGACATC +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFYRSTF*LFWSDI
Trigger: GATGTCACTCCAGAAAAGCCAGAAAGTGCTGCGATA...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCCGTTGTTTAGCCAAGTaGACTTCACTCTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFRCLAK*TSLLGE
Trigger: TTCTCCCAAGAGTGAAGTCCACTTGGCTAAACAACG...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGTCTGCAACATCATGCTaGGCAGCTTTAGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQSATSC*AALETA
Trigger: TGCTGTCTCTAAAGCTGCCCAGCATGATGTTGCAGA...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp ACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAATAAAGTCCTCTTAAGCGTGTTGGGTAAATaGTCCATGAGGACATGCAGA +
Preference number: 4 (lower is better)
Translates to: TRSDYKGLLVGQLNKVLLSVLGK*SMRTCR
Trigger: TCTGCATGTCCTCATGGACCATTTACCCAACACGCT...TAAGAGGACTTTATTCAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp ACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAATAAAGTCCTCTTAATCCTCCTTTATACCTaGGCTAAAGATGCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: TRSDYKGLLVGQLNKVLLILLYT*AKDAGD
Trigger: ATCCCCTGCATCTTTAGCTCAGGTATAAAGGAGGAT...TAAGAGGACTTTATTCAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTTCAGCACACTTTGAGTaGTGGCTTCTGAGTACTTTG +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPSAHFE*WLLSTL
Trigger: CAAAGTACTCAGAAGCCATCACTCAAAGTGTGCTGA...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTTCGTGTCTCTTTCAATaGGGCTCCACTTGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPSCLFQ*GSTCVR
Trigger: TCTTACACAAGTGGAGCCTCATTGAAAGAGACACGA...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGACTTTCTGGCTTTTCTaGAGTGACATCTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQTFWLF*SDICDP
Trigger: GGGATCACAGATGTCACTCCAGAAAAGCCAGAAAGT...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTAGAAGTAAAATCTTCTaGTCCAGCACACTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPRSKIF*SSTLRV
Trigger: CACCCTCAGTGTGCTGGACCAGAAGATTTTACTTCT...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTAGCAGATCTGGTGATGTaGGCAACATTCTGCAGGATT +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLADLVM*ATFCRI
Trigger: AATCCTGCAGAATGTTGCCCACATCACCAGATCTGC...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTTACTACCATTGGCTGTaGCAAAATGTGGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPYYHWL*QNVALE
Trigger: CTCAAGAGCCACATTTTGCCACAGCCAATGGTAGTA...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTATGCCCAAGGCTTCTCTaGAGAGCTGAACAAATTCTT +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLCPRLL*RAEQIL
Trigger: AAGAATTTGTTCAGCTCTTCAGAGAAGCCTTGGGCA...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTTACACGTCTGAATCTTaGCATGTCTCTTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPYTSES*HVSLSR
Trigger: TCTGGACAAAGAGACATGGCAAGATTCAGACGTGTA...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGATGTGGGCAACATTCTaGAGGATTTCCAGAATCCAA +
Preference number: 4 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQMWATF*RISRIQ
Trigger: TTGGATTCTGGAAATCCTGCAGAATGTTGCCCACAT...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCATCTTTGGTAGAAAGTaGCACCTTGTTCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFIFGRK*HLVHSE
Trigger: TTCACTGTGAACAAGGTGGCACTTTCTACCAAAGAT...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTAAACAGTGTTCAGATCTaGCAAAATCTTGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLNSVQI*QNLAQG
Trigger: GCCTTGGGCAAGATTTTGCCAGATCTGAACACTGTT...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTAAGCACATCATCAATATaGGAGATGGGGATGCTGACA +
Preference number: 4 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLSTSSI*EMGMLT
Trigger: TGTCAGCATCCCCATCTCCCATATTGATGATGTGCT...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCCCTTCTGGGTTTTCGTaGTGTTTTTATTGTGAATCA +
Preference number: 4 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFPSGFS*CFYCES
Trigger: TGATTCACAATAAAAACATCACGAAAACCCAGAAGG...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR TCA 90 bp AAAATAGTTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTATGGCCTCGAAAGCTTaGAATATTAACAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: KIVACISLCLSRNPLKLPMASKA*NINSIS
Trigger: TGAAATGCTGTTAATATTTCAAGCTTTCGAGGCCAT...AGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CCA 90 bp ACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAATAAAGTCCTCTTAAAGAAACGCACCTTCTaGGTTTTCGTGATGTTTTTA +
Preference number: 4 (lower is better)
Translates to: TRSDYKGLLVGQLNKVLLKKRTF*VFVMFL
Trigger: TAAAAACATCACGAAAACCCAGAAGGTGCGTTTCTT...TAAGAGGACTTTATTCAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR GCA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGAGTGTTTTACAGGTATaGTGTCCAAATTTAATGCCT +
Preference number: 4 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQSVLQV*CPNLMP
Trigger: AGGCATTAAATTTGGACAGCATACCTGTAAAACACT...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp CAAGATGCTTCCAGCTGGGGCTCAGCAGTCTCCTCCAGCCCTCCATaGCTCCTCTTCCGGCCTCGTGGGCCTCGGGCCTGGGCAGCTACC +
Preference number: 5 (lower is better)
Translates to: QDASSWGSAVSSSPP*LLFRPRGPRAWAAT
Trigger: GGTAGCTGCCCAGGCCCGAGGCCCACGAGGCCGGAAGAGGAGGCATGGAGGGCTGGAGGAGACTGCTGAGCCCCAGCTGGAAGCATCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp TCCCCTGTGTCCTCCGTGGGCAGCAGCTTCCGGTACTGCGGGAAGTaGAGGATGGTCTGCATCATCCGGTCTGGGTCCAGCAGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: SPVSSVGSSFRYCGK*RMVCIIRSGSSRRR
Trigger: CCTCCGCCTGCTGGACCCAGACCGGATGATGCAGACCATCCTGCACTTCCCGCAGTACCGGAAGCTGCTGCCCACGGAGGACACAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp TCCGTGGGCAGCAGCTTCCGGTACTGCGGGAAGTGCAGGATGGTCTaGATCATCCGGTCTGGGTCCAGCAGGCGGAGGATGTCCCCAACG +
Preference number: 5 (lower is better)
Translates to: SVGSSFRYCGKCRMV*IIRSGSSRRRMSPT
Trigger: CGTTGGGGACATCCTCCGCCTGCTGGACCCAGACCGGATGATGCAGACCATCCTGCACTTCCCGCAGTACCGGAAGCTGCTGCCCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp ACCAGTGGCTCCCCTGTGTCCTCCGTGGGCAGCAGCTTCCGGTACTaGGGGAAGTGCAGGATGGTCTGCATCATCCGGTCTGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: TSGSPVSSVGSSFRY*GKCRMVCIIRSGSS
Trigger: GCTGGACCCAGACCGGATGATGCAGACCATCCTGCACTTCCCGCAGTACCGGAAGCTGCTGCCCACGGAGGACACAGGGGAGCCACTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp TGGGCCTCTGGCAGGGCCAGTAGGGCCAGGGTGACTTCTCGAATCTaGACACCTTCCATGTACGGGTGCAGCTCTCGCAGGGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: WASGRASRARVTSRI*TPSMYGCSSRRASS
Trigger: GCTGGAGGCCCTGCGAGAGCTGCACCCGTACATGGAAGGTGTCCAGATTCGAGAAGTCACCCTGGCCCTACTGGCCCTGCCAGAGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp TGTCCTCCGTGGGCAGCAGCTTCCGGTACTGCGGGAAGTGCAGGATaGTCTGCATCATCCGGTCTGGGTCCAGCAGGCGGAGGATGTCCC +
Preference number: 5 (lower is better)
Translates to: CPPWAAASGTAGSAG*SASSGLGPAGGGCP
Trigger: GGGACATCCTCCGCCTGCTGGACCCAGACCGGATGATGCAGACCATCCTGCACTTCCCGCAGTACCGGAAGCTGCTGCCCACGGAGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp CAGGGGAGGGGACGGCAGACATCTGAGACCTCCATGGTCCTCACGGCCTGGCAGAGTTCCAGGGCCACCTaGAGCATGTGGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QGRGRQTSETSMVLTAWQSSRAT*SMWCCR
Trigger: CCTGCAGCACCACATGCTCAAGGTGGCCCTGGAACT...CTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp CAGGGGAGGGGACGGCAGACATCTGAGACCTCCATGGTCCTCACGGCCTGGCAGGATCCTGGTGGCTGCTaGCCAGCAGTTGTACCAGGG +
Preference number: 5 (lower is better)
Translates to: QGRGRQTSETSMVLTAWQDPGGC*PAVVPG
Trigger: CCCTGGTACAACTGCTGGCAAGCAGCCACCAGGATC...CTGCCAGGCCGTGAGGACCATGGAGGTCTCAGATGTCTGCCGTCCCCTCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp GCTGGGTCAGCAGGTGGGCCTCTGGCAGGGCCAGTAGGGCCAGGGTaGCTTCTCGAATCTGGACACCTTCCATGTACGGGTGCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: AGSAGGPLAGPVGPG*LLESGHLPCTGAAL
Trigger: GAGAGCTGCACCCGTACATGGAAGGTGTCCAGATTCGAGAAGTCACCCTGGCCCTACTGGCCCTGCCAGAGGCCCACCTGCTGACCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp AAGAGATCCGACTCGGCCCGGGCAGCCTCTAGCTTCTGCTGGTTCTaGGCGTCCAGCCGCTCAGCGTGGATGACCAGCTGCTTAAGGAGG +
Preference number: 5 (lower is better)
Translates to: KRSDSARAASSFCWF*ASSRSAWMTSCLRR
Trigger: CCTCCTTAAGCAGCTGGTCATCCACGCTGAGCGGCTGGACGCCCAGAACCAGCAGAAGCTAGAGGCTGCCCGGGCCGAGTCGGATCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp CTTCCGGTACTGCGGGAAGTGCAGGATGGTCTGCATCATCCGGTCTaGGTCCAGCAGGCGGAGGATGTCCCCAACGCTTGGCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LPVLREVQDGLHHPV*VQQAEDVPNAWLLP
Trigger: TGGCAGCAGCCAAGCGTTGGGGACATCCTCCGCCTGCTGGACCCAGACCGGATGATGCAGACCATCCTGCACTTCCCGCAGTACCGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp GCAAGCATCTTCTCGGATTCCTGGGAGCCGACCTGGCCAGGTGGCTaGCTTCTCTCCTCCGGCGCTTTGTTGCCCAGGTTGGTCACCCAC +
Preference number: 5 (lower is better)
Translates to: ASIFSDSWEPTWPGG*LLSSGALLPRLVTH
Trigger: GTGGGTGACCAACCTGGGCAACAAAGCGCCGGAGGAGAGAAGCCAGCCACCTGGCCAGGTCGGCTCCCAGGAATCCGAGAAGATGCTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp GCGTGGAGAAGCAGGAAGATGGCGGGAGTGTACATGGTCCTGAGCTaGTGGACACCTGCAGCGGCAAGGCCTCTTGGGCTTGCGCAGGAA +
Preference number: 5 (lower is better)
Translates to: AWRSRKMAGVYMVLS*WTPAAARPLGLAQE
Trigger: TTCCTGCGCAAGCCCAAGAGGCCTTGCCGCTGCAGGTGTCCAGCAGCTCAGGACCATGTACACTCCCGCCATCTTCCTGCTTCTCCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp ATGTCCAAAAAGAGATCCGACTCGGCCCGGGCAGCCTCTAGCTTCTaGTGGTTCTGGGCGTCCAGCCGCTCAGCGTGGATGACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: MSKKRSDSARAASSF*WFWASSRSAWMTSC
Trigger: GCAGCTGGTCATCCACGCTGAGCGGCTGGACGCCCAGAACCAGCAGAAGCTAGAGGCTGCCCGGGCCGAGTCGGATCTCTTTTTGGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp GAGCCCCCAGGCCTCGCACATACTCGGCGCACCAGAGTAGCTCACTaGTCTGCAGCTGATCCTGGTGGCTGCTTGCCAGCAGTTGTACCA +
Preference number: 5 (lower is better)
Translates to: EPPGLAHTRRTRVAH*SAADPGGCLPAVVP
Trigger: TGGTACAACTGCTGGCAAGCAGCCACCAGGATCAGCTGCAGAGCAGTGAGCTACTCTGGTGCGCCGAGTATGTGCGAGGCCTGGGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp GCAGGCGGAGGATGTCCCCAACGCTTGGCTGCTGCCAAAGTGACTTaGCCAGGCTCCGGCATGTCTTGTGATGTTCCACTGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: AGGGCPQRLAAAKVT*PGSGMSCDVPLLLG
Trigger: GCCCAGCAGCAGTGGAACATCACAAGACATGCCGGAGCCTGGGCAAGTCACTTTGGCAGCAGCCAAGCGTTGGGGACATCCTCCGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp CAAGGCAAGCATCTTCTCGGATTCCTGGGAGCCGACCTGGCCAGGTaGCTGGCTTCTCTCCTCCGGCGCTTTGTTGCCCAGGTTGGTCAC +
Preference number: 5 (lower is better)
Translates to: QGKHLLGFLGADLAR*LASLLRRFVAQVGH
Trigger: GTGACCAACCTGGGCAACAAAGCGCCGGAGGAGAGAAGCCAGCCACCTGGCCAGGTCGGCTCCCAGGAATCCGAGAAGATGCTTGCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp GTGTGGGACCAGGCAAGGGGTCACCGGGCCCCCAGTGGGTCAGTGTaGCCCTCAGGAGGTCCTTGCATTTCTCCAAGCAAGATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: VWDQARGHRAPSGSV*PSGGPCISPSKMLP
Trigger: TGGAAGCATCTTGCTTGGAGAAATGCAAGGACCTCCTGAGGGCCACACTGACCCACTGGGGGCCCGGTGACCCCTTGCCTGGTCCCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp GAAGTTCTCCACGGTGCTCTTGAGGTACAGCAGTACCTGCTTGGCTaGGCGCAGCATGTGCTGCAGAGCCAGGCTTGGGACAGCGGCGAG +
Preference number: 5 (lower is better)
Translates to: EVLHGALEVQQYLLG*AQHVLQSQAWDSGE
Trigger: CTCGCCGCTGTCCCAAGCCTGGCTCTGCAGCACATGCTGCGCTCAGCCAAGCAGGTACTGCTGTACCTCAAGAGCACCGTGGAGAACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp GTCCAGCAGGCGGAGGATGTCCCCAACGCTTGGCTGCTGCCAAAGTaGCTTGCCCAGGCTCCGGCATGTCTTGTGATGTTCCACTGCTGC +
Preference number: 5 (lower is better)
Translates to: VQQAEDVPNAWLLPK*LAQAPACLVMFHCC
Trigger: GCAGCAGTGGAACATCACAAGACATGCCGGAGCCTGGGCAAGTCACTTTGGCAGCAGCCAAGCGTTGGGGACATCCTCCGCCTGCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp CCAAGACTGCTTAAGTGTCTCTCCTTCCCAAGAGACTGTGTGCCTTaGTGGGTCAGCAGGTGGGCCTCTGGCAGGGCCAGTAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PRLLKCLSFPRDCVP*WVSRWASGRASRAR
Trigger: CCTGGCCCTACTGGCCCTGCCAGAGGCCCACCTGCTGACCCAGCAAGGCACACAGTCTCTTGGGAAGGAGAGACACTTAAGCAGTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp ACTTCACAAGGTGGGTGCCGCTGTACTGAAGCAGGAGGCTGGCAATaGCCAGGGCTGTCTGTGTCCGTCGGGCCAGGCAGTACTCAAGCA +
Preference number: 5 (lower is better)
Translates to: TSQGGCRCTEAGGWQ*PGLSVSVGPGSTQA
Trigger: TGCTTGAGTACTGCCTGGCCCGACGGACACAGACAGCCCTGGGCATTGCCAGCCTCCTGCTTCAGTACAGCGGCACCCACCTTGTGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp AGCCGACCTGGCCAGGTGGCTGGCTTCTCTCCTCCGGCGCTTTGTTaGCCAGGTTGGTCACCCACAGGGTGTGTAACAAGGAGATCACGT +
Preference number: 5 (lower is better)
Translates to: SRPGQVAGFSPPALC*PGWSPTGCVTRRSR
Trigger: ACGTGATCTCCTTGTTACACACCCTGTGGGTGACCAACCTGGGCAACAAAGCGCCGGAGGAGAGAAGCCAGCCACCTGGCCAGGTCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp TCCAAAAAGAGATCCGACTCGGCCCGGGCAGCCTCTAGCTTCTGCTaGTTCTGGGCGTCCAGCCGCTCAGCGTGGATGACCAGCTGCTTA +
Preference number: 5 (lower is better)
Translates to: SKKRSDSARAASSFC*FWASSRSAWMTSCL
Trigger: TAAGCAGCTGGTCATCCACGCTGAGCGGCTGGACGCCCAGAACCAGCAGAAGCTAGAGGCTGCCCGGGCCGAGTCGGATCTCTTTTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp TGTCTCTCCTTCCCAAGAGACTGTGTGCCTTGCTGGGTCAGCAGGTaGGCCTCTGGCAGGGCCAGTAGGGCCAGGGTGACTTCTCGAATC +
Preference number: 5 (lower is better)
Translates to: CLSFPRDCVPCWVSR*ASGRASRARVTSRI
Trigger: GATTCGAGAAGTCACCCTGGCCCTACTGGCCCTGCCAGAGGCCCACCTGCTGACCCAGCAAGGCACACAGTCTCTTGGGAAGGAGAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp AGACTGCTTAAGTGTCTCTCCTTCCCAAGAGACTGTGTGCCTTGCTaGGTCAGCAGGTGGGCCTCTGGCAGGGCCAGTAGGGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: RLLKCLSFPRDCVPC*VSRWASGRASRARV
Trigger: CACCCTGGCCCTACTGGCCCTGCCAGAGGCCCACCTGCTGACCCAGCAAGGCACACAGTCTCTTGGGAAGGAGAGACACTTAAGCAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp GAAGAGTCTGAAGGAATACCGTGTCCAGCTCATGCTCAGCCAGAGTaGGGAGCAGAGCCCCCAGGCCTCGCACATACTCGGCGCACCAGA +
Preference number: 5 (lower is better)
Translates to: EESEGIPCPAHAQPE*GAEPPGLAHTRRTR
Trigger: TCTGGTGCGCCGAGTATGTGCGAGGCCTGGGGGCTCTGCTCCCCACTCTGGCTGAGCATGAGCTGGACACGGTATTCCTTCAGACTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp GCTCAAACTTCACAAGGTGGGTGCCGCTGTACTGAAGCAGGAGGCTaGCAATGCCCAGGGCTGTCTGTGTCCGTCGGGCCAGGCAGTACT +
Preference number: 5 (lower is better)
Translates to: AQTSQGGCRCTEAGG*QCPGLSVSVGPGST
Trigger: AGTACTGCCTGGCCCGACGGACACAGACAGCCCTGGGCATTGCCAGCCTCCTGCTTCAGTACAGCGGCACCCACCTTGTGAAGTTTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp CTGTGCTGGAGGTACACATGGATAAGGGGGAAGAAGTCATCTAGGTaGTCCTGCAAGGTGGGCCCCACACCAGGCTGCCCACACCACAGC +
Preference number: 5 (lower is better)
Translates to: LCWRYTWIRGKKSSR*SCKVGPTPGCPHHS
Trigger: GCTGTGGTGTGGGCAGCCTGGTGTGGGGCCCACCTTGCAGGAGCACCTAGATGACTTCTTCCCCCTTATCCATGTGTACCTCCAGCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp GGTCAGTGTGGCCCTCAGGAGGTCCTTGCATTTCTCCAAGCAAGATaGTTCCAGCTGGGGCTCAGCAGTCTCCTCCAGCCCTCCATGCCT +
Preference number: 5 (lower is better)
Translates to: GQCGPQEVLAFLQAR*FQLGLSSLLQPSMP
Trigger: AGGCATGGAGGGCTGGAGGAGACTGCTGAGCCCCAGCTGGAAGCATCTTGCTTGGAGAAATGCAAGGACCTCCTGAGGGCCACACTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp ACCGAGTGGAAAGGGCTCTCTTTCCGGCCCTGGGCCACCAACAACTaGAGCATGACCGTGCTGAACTTGCAGGCCACATCCTGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: TEWKGLSFRPWATNN*SMTVLNLQATSCAG
Trigger: ACCTGCACAGGATGTGGCCTGCAAGTTCAGCACGGTCATGCTGCAGTTGTTGGTGGCCCAGGGCCGGAAAGAGAGCCCTTTCCACTCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp GGCCAGGTGGCTGGCTTCTCTCCTCCGGCGCTTTGTTGCCCAGGTTaGTCACCCACAGGGTGTGTAACAAGGAGATCACGTTGGACAGCA +
Preference number: 5 (lower is better)
Translates to: GQVAGFSPPALCCPG*SPTGCVTRRSRWTA
Trigger: TGCTGTCCAACGTGATCTCCTTGTTACACACCCTGTGGGTGACCAACCTGGGCAACAAAGCGCCGGAGGAGAGAAGCCAGCCACCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp TGGACACCTTCCATGTACGGGTGCAGCTCTCGCAGGGCCTCCAGCTaGGGCAGAGTCTTGGGCGTTGAGGTTGAGTTCAGAGTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: WTPSMYGCSSRRASS*GRVLGVEVEFRVLV
Trigger: CACAAGGACTCTGAACTCAACCTCAACGCCCAAGACTCTGCCTCAGCTGGAGGCCCTGCGAGAGCTGCACCCGTACATGGAAGGTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp CTTGGCTGCTGCCAAAGTGACTTGCCCAGGCTCCGGCATGTCTTGTaGTGTTCCACTGCTGCTGGGCCCCACAGCAGAACCCTGAAACTG +
Preference number: 5 (lower is better)
Translates to: LGCCQSDLPRLRHVL*CSTAAGPHSRTLKL
Trigger: CAGTTTCAGGGTTCTGCTGTGGGGCCCAGCAGCAGTGGAACATCACAAGACATGCCGGAGCCTGGGCAAGTCACTTTGGCAGCAGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp AGCTGGCTGAAGTTCTCCACGGTGCTCTTGAGGTACAGCAGTACCTaGTTGGCTGAGCGCAGCATGTGCTGCAGAGCCAGGCTTGGGACA +
Preference number: 5 (lower is better)
Translates to: SWLKFSTVLLRYSST*LAERSMCCRARLGT
Trigger: TGTCCCAAGCCTGGCTCTGCAGCACATGCTGCGCTCAGCCAAGCAGGTACTGCTGTACCTCAAGAGCACCGTGGAGAACTTCAGCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp TGTAGCCCTCGACAACATCACACATGTCTTCCTGCGGTAGCTTCTTaGCAGCAGAGACGAAGGCTTCCAAAGCCGGTCCTGGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: CSPRQHHTCLPAVAS*QQRRRLPKPVLGPA
Trigger: CGCAGGGCCCAGGACCGGCTTTGGAAGCCTTCGTCTCTGCTGCCAAGAAGCTACCGCAGGAAGACATGTGTGATGTTGTCGAGGGCTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp AAGAGCTGCACACATCTCTGGCAGCTTCAGGACCCTGGGTCACCATaGCAGTCATCAGGTCCAGGCAGGCTCGAGCCATCCTGTAACCAG +
Preference number: 5 (lower is better)
Translates to: KSCTHLWQLQDPGSP*QSSGPGRLEPSCNQ
Trigger: CTGGTTACAGGATGGCTCGAGCCTGCCTGGACCTGATGACTGCCATGGTGACCCAGGGTCCTGAAGCTGCCAGAGATGTGTGCAGCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp CCTTCTCGTGCTCCTGGGTGTTTTCATCTTCTGGCTCCCTGCCACTaGAGGACACAGCCAGCCACTGTATACAGGACCGCAGGAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PSRAPGCFHLLAPCH*RTQPATVYRTAGGS
Trigger: AGACCCTCCTGCGGTCCTGTATACAGTGGCTGGCTGTGTCCTTCAGTGGCAGGGAGCCAGAAGATGAAAACACCCAGGAGCACGAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp GTACAGAACTTGGGACTGTTCCCGGAAGCGAGCTCCCTCCAGGTGTaGGTAGTAGGCTGCGAGGACATAGTAGGCTGCAGCTCGCATCTG +
Preference number: 5 (lower is better)
Translates to: VQNLGLFPEASSLQV*VVGCEDIVGCSSHL
Trigger: CAGATGCGAGCTGCAGCCTACTATGTCCTCGCAGCCTACTACTCACACCTGGAGGGAGCTCGCTTCCGGGAACAGTCCCAAGTTCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp GTTGGCCGCATGAAGCTTCCTTGCGCCCTGTGCTGGAGGTACACATaGATAAGGGGGAAGAAGTCATCTAGGTGCTCCTGCAAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: VGRMKLPCALCWRYT*IRGKKSSRCSCKVG
Trigger: GCCCACCTTGCAGGAGCACCTAGATGACTTCTTCCCCCTTATCCATGTGTACCTCCAGCACAGGGCGCAAGGAAGCTTCATGCGGCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp CCACAGGGCCTTCAAGACAGGAGTGACAGCAGAGGATACTCCTGTTaGCCGCATGAAGCTTCCTTGCGCCCTGTGCTGGAGGTACACATG +
Preference number: 5 (lower is better)
Translates to: PQGLQDRSDSRGYSC*PHEASLRPVLEVHM
Trigger: CATGTGTACCTCCAGCACAGGGCGCAAGGAAGCTTCATGCGGCCAACAGGAGTATCCTCTGCTGTCACTCCTGTCTTGAAGGCCCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp TCAAGCACTGGGCTGAGGAGTCCACGTTCCTGCAGAGCACAACAATaGCCTCGGGCTCATCAAGTGGCACGTCCTTTGCAGCCTCACAGA +
Preference number: 5 (lower is better)
Translates to: SSTGLRSPRSCRAQQ*PRAHQVARPLQPHR
Trigger: TCTGTGAGGCTGCAAAGGACGTGCCACTTGATGAGCCCGAGGCCATTGTTGTGCTCTGCAGGAACGTGGACTCCTCAGCCCAGTGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp CAGAGGCACTGTGGTCACCATCACCATCGCCAGGAGCCTTGGCAATaGGATAAACTCTCTGGTCCAAAAGGCCGGGGAAATCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QRHCGHHHHRQEPWQ*DKLSGPKGRGNLWL
Trigger: CAGCCAGAGATTTCCCCGGCCTTTTGGACCAGAGAGTTTATCCCATTGCCAAGGCTCCTGGCGATGGTGATGGTGACCACAGTGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp GCACACCAGAGGCACTGTGGTCACCATCACCATCGCCAGGAGCCTTaGCAATGGGATAAACTCTCTGGTCCAAAAGGCCGGGGAAATCTC +
Preference number: 5 (lower is better)
Translates to: AHQRHCGHHHHRQEP*QWDKLSGPKGRGNL
Trigger: GAGATTTCCCCGGCCTTTTGGACCAGAGAGTTTATCCCATTGCCAAGGCTCCTGGCGATGGTGATGGTGACCACAGTGCCTCTGGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp CCGGACCAGCATTGCCTTCTCGTGCTCCTGGGTGTTTTCATCTTCTaGCTCCCTGCCACTGAAGGACACAGCCAGCCACTGTATACAGGA +
Preference number: 5 (lower is better)
Translates to: PDQHCLLVLLGVFIF*LPATEGHSQPLYTG
Trigger: TCCTGTATACAGTGGCTGGCTGTGTCCTTCAGTGGCAGGGAGCCAGAAGATGAAAACACCCAGGAGCACGAGAAGGCAATGCTGGTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp GGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGGCTGCAGAGCCAGGCTaGGGACAGCGGCGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: GSASVTRSDYKGLLVGQLAAEPG*GQRREA
Trigger: AGCTTCTCGCCGCTGTCCCAAGCCTGGCTCTGCAGC...CAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp GCAGAGGATACTCCTGTTGGCCGCATGAAGCTTCCTTGCGCCCTGTaGTGGAGGTACACATGGATAAGGGGGAAGAAGTCATCTAGGTGC +
Preference number: 5 (lower is better)
Translates to: AEDTPVGRMKLPCAL*WRYTWIRGKKSSRC
Trigger: GCACCTAGATGACTTCTTCCCCCTTATCCATGTGTACCTCCAGCACAGGGCGCAAGGAAGCTTCATGCGGCCAACAGGAGTATCCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp GGAGTGACAGCAGAGGATACTCCTGTTGGCCGCATGAAGCTTCCTTaGGCCCTGTGCTGGAGGTACACATGGATAAGGGGGAAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: GVTAEDTPVGRMKLP*ALCWRYTWIRGKKS
Trigger: TGACTTCTTCCCCCTTATCCATGTGTACCTCCAGCACAGGGCGCAAGGAAGCTTCATGCGGCCAACAGGAGTATCCTCTGCTGTCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp GCCAATGACCGAAGCACCCAGCTGGCCACCAAAGAAACAGCAGCATaGGCAGAGCTCAGTGTTTTACTCTTGGGGATAGTCTGGCCCACA +
Preference number: 5 (lower is better)
Translates to: ANDRSTQLATKETAA*AELSVLLLGIVWPT
Trigger: TGTGGGCCAGACTATCCCCAAGAGTAAAACACTGAGCTCTGCGCATGCTGCTGTTTCTTTGGTGGCCAGCTGGGTGCTTCGGTCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp TTTGGCTTCTTCCTTTTCATTCAGAGAATCAAGGCACAGGGCCTCTaGCACCGAGTGGAAAGGGCTCTCTTTCCGGCCCTGGGCCACCAA +
Preference number: 5 (lower is better)
Translates to: FGFFLFIQRIKAQGL*HRVERALFPALGHQ
Trigger: TTGGTGGCCCAGGGCCGGAAAGAGAGCCCTTTCCACTCGGTGGCAGAGGCCCTGTGCCTTGATTCTCTGAATGAAAAGGAAGAAGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp GAGGATACTCCTGTTGGCCGCATGAAGCTTCCTTGCGCCCTGTGCTaGAGGTACACATGGATAAGGGGGAAGAAGTCATCTAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: EDTPVGRMKLPCALC*RYTWIRGKKSSRCS
Trigger: GGAGCACCTAGATGACTTCTTCCCCCTTATCCATGTGTACCTCCAGCACAGGGCGCAAGGAAGCTTCATGCGGCCAACAGGAGTATCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp GCCAGTCTTCACGGCGCTGTCCCCGAGAAGGTCAGCTACTACCATTaGCTGTGGCAAAATGTGGCTCTTGAGCCAGTCAAGGAGTCTTGT +
Preference number: 5 (lower is better)
Translates to: ASLHGAVPEKVSYYH*LWQNVALEPVKESC
Trigger: ACAAGACTCCTTGACTGGCTCAAGAGCCACATTTTGCCACAGCCAATGGTAGTAGCTGACCTTCTCGGGGACAGCGCCGTGAAGACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGATGACCGTGCTGAACTaGCAGGCCACATCCTGTGCA +
Preference number: 5 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALMTVLN*QATSCA
Trigger: TGCACAGGATGTGGCCTGCAAGTTCAGCACGGTCAT...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp TTCACAAACTGCTGCCAGTCACCAGGGTCAACCTCCTTAACCGCATaGAACAACTCGCTTAACCGGACCAGCATTGCCTTCTCGTGCTCC +
Preference number: 5 (lower is better)
Translates to: FTNCCQSPGSTSLTA*NNSLNRTSIAFSCS
Trigger: GGAGCACGAGAAGGCAATGCTGGTCCGGTTAAGCGAGTTGTTGCATGCGGTTAAGGAGGTTGACCCTGGTGACTGGCAGCAGTTTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGTCCTTCAGCAGGGTCTaGAACCGCACGCCCGTGAAC +
Preference number: 5 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQSFSRV*NRTPVN
Trigger: GTTCACGGGCGTGCGGTTCAAGACCCTGCTGAAGGA...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp TCTGCCAAGGCTGCTGAGACAGAGTCAGCCAGGGTCCAACTCTTGTaGTTACTCAGAGTCCGAAGCGTGTTGGGTAAATGGTCCATGAGG +
Preference number: 5 (lower is better)
Translates to: SAKAAETESARVQLL*LLRVRSVLGKWSMR
Trigger: CCTCATGGACCATTTACCCAACACGCTTCGGACTCTGAGTAATCACAAGAGTTGGACCCTGGCTGACTCTGTCTCAGCAGCCTTGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp GTCCCTCTGGGTATGGAGAAGGTCGGTCAACACTGCAGTCATATATaGCATGATGCTTTCCCCTGCTTCACAGTCTGTCCCAAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: VPLGMEKVGQHCSHI*HDAFPCFTVCPKEQ
Trigger: CTGCTCCTTGGGACAGACTGTGAAGCAGGGGAAAGCATCATGGCATATATGACTGCAGTGTTGACCGACCTTCTCCATACCCAGAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp AACTTGCTGATCTTCCAGTACATGTGCTCCTCTGGTTTCAAGATCTaGACGGCTGCCTTGGCGATGAAAAGGGCCACGGTGAAAGGGAGC +
Preference number: 5 (lower is better)
Translates to: NLLIFQYMCSSGFKI*TAALAMKRATVKGS
Trigger: GCTCCCTTTCACCGTGGCCCTTTTCATCGCCAAGGCAGCCGTGCAGATCTTGAAACCAGAGGAGCACATGTACTGGAAGATCAGCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp TGCTTTGTAAGCGCAATGAGGACATACAGGAACTCACTGACCATGTaGAAGGCAAGCATCTTCTCGGATTCCTGGGAGCCGACCTGGCCA +
Preference number: 5 (lower is better)
Translates to: CFVSAMRTYRNSLTM*KASIFSDSWEPTWP
Trigger: TGGCCAGGTCGGCTCCCAGGAATCCGAGAAGATGCTTGCCTTGCACATGGTCAGTGAGTTCCTGTATGTCCTCATTGCGCTTACAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp TGCCTTGGCGATGAAAAGGGCCACGGTGAAAGGGAGCCTCAGGTTTaGAGTTCTAATCCCATTGCGGACAACATCGAGCAGGTACAGAAC +
Preference number: 5 (lower is better)
Translates to: CLGDEKGHGEREPQV*SSNPIADNIEQVQN
Trigger: GTTCTGTACCTGCTCGATGTTGTCCGCAATGGGATTAGAACTCCAAACCTGAGGCTCCCTTTCACCGTGGCCCTTTTCATCGCCAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp GTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGCTGGGGCTCTGGGCAAAATGTGGCTCTaGAGCCAGTCAAGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: VYVCLGTHLSFLEPAGALGKMWL*SQSRSL
Trigger: AAGACTCCTTGACTGGCTCAAGAGCCACATTTTGCC...CAGAGCCCCAGCGGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp TTTGGTCAGCAGGTCCGGGCACACCTTCAGAATGCTCACCACAAGTaGGGCCACCAGGTCATCACCAGCTGCAGTTTTCAAACTCAACAA +
Preference number: 5 (lower is better)
Translates to: FGQQVRAHLQNAHHK*GHQVITSCSFQTQQ
Trigger: TTGTTGAGTTTGAAAACTGCAGCTGGTGATGACCTGGTGGCCTCACTTGTGGTGAGCATTCTGAAGGTGTGCCCGGACCTGCTGACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp AACTGGCCCAGTTTATGGAGAATTGGGGAACTTGCCACCAGTAGCTaGAGAACCCCTGCACTGAAGTGGGCTGCTAGGAGCTTCACAAGA +
Preference number: 5 (lower is better)
Translates to: NWPSLWRIGELATSS*RTPALKWAARSFTR
Trigger: TCTTGTGAAGCTCCTAGCAGCCCACTTCAGTGCAGGGGTTCTTCAGCTACTGGTGGCAAGTTCCCCAATTCTCCATAAACTGGGCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp GGTTGGCAAAAACAGAGAGTGCTGGGTGAGCATCATGTGGACCACTaGAAGCTGGACAAGTTTCGTGCGCCCAGAGCTTTCTGGACCATA +
Preference number: 5 (lower is better)
Translates to: GWQKQRVLGEHHVDH*KLDKFRAPRAFWTI
Trigger: TATGGTCCAGAAAGCTCTGGGCGCACGAAACTTGTCCAGCTTTCAGTGGTCCACATGATGCTCACCCAGCACTCTCTGTTTTTGCCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp AACAGCAGAGATCCATCAGGAAGTTATGAACGAGGTCCCTCACCATaGCTTTCCCCGCCTCTTCAGCTGATATCGCAGCACTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: NSRDPSGSYERGPSP*LSPPLQLISQHFLA
Trigger: AGCCAGAAAGTGCTGCGATATCAGCTGAAGAGGCGGGGAAAGCCATGGTGAGGGACCTCGTTCATAACTTCCTGATGGATCTCTGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp AAAAACAGAGAGTGCTGGGTGAGCATCATGTGGACCACTGAAAGCTaGACAAGTTTCGTGCGCCCAGAGCTTTCTGGACCATACAGGAGC +
Preference number: 5 (lower is better)
Translates to: KNRECWVSIMWTTES*TSFVRPELSGPYRS
Trigger: GCTCCTGTATGGTCCAGAAAGCTCTGGGCGCACGAAACTTGTCCAGCTTTCAGTGGTCCACATGATGCTCACCCAGCACTCTCTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGGAGACAGCAGGAGTCTaGCTGCTGCTCTTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQETAGV*LLLFFP
Trigger: AGGGAAGAAGAGCAGCAGCAAGACTCCTGCTGTCTC...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp TTAATACCAATCCATGACCAACCAGCACCTAGCTCCTCTGTCAGGGCCTTCAGGGCCCTCAGGAGGTCCTaGCATTTCTCCAAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: LIPIHDQPAPSSSVRAFRALRRS*HFSKQD
Trigger: ATCTTGCTTGGAGAAATGCAAGGACCTCCTGAGGGC...CCTGAAGGCCCTGACAGAGGAGCTAGGTGCTGGTTGGTCATGGATTGGTATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp CTAATCCCATGCTTTCGAGAACAGCAGAGATCCATCAGGAAGTTATaGACGAGGTCCCTCACCATGGCTTTCCCCGCCTCTTCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: LIPCFREQQRSIRKL*TRSLTMAFPASSAD
Trigger: ATCAGCTGAAGAGGCGGGGAAAGCCATGGTGAGGGACCTCGTTCATAACTTCCTGATGGATCTCTGCTGTTCTCGAAAGCATGGGATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp TTCACTCTCGGGCCGCTTCTCCCCACTCAGGAGCTGGAAAATCTCTaGACATTCCATGGAAATCTTGATGTAGCCCTCGACAACATCACA +
Preference number: 5 (lower is better)
Translates to: FTLGPLLPTQELENL*TFHGNLDVALDNIT
Trigger: TGTGATGTTGTCGAGGGCTACATCAAGATTTCCATGGAATGTGCAGAGATTTTCCAGCTCCTGAGTGGGGAGAAGCGGCCCGAGAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp AAGGTCGGTCAACACTGCAGTCATATATGCCATGATGCTTTCCCCTaGTTCACAGTCTGTCCCAAGGAGCAGCTTATTCCTGGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: KVGQHCSHICHDAFP*FTVCPKEQLIPGFQ
Trigger: CTGGAAGCCAGGAATAAGCTGCTCCTTGGGACAGACTGTGAAGCAGGGGAAAGCATCATGGCATATATGACTGCAGTGTTGACCGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGTGCAAGAGTGTCAGGTaGCCTCCTCTGCCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQCKSVR*PPLPEV
Trigger: AACTTCTGGCAGAGGAGGCAACCTGACACTCTTGCA...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGAGCAGGTACAGAACTaGGGACTGTTCCCGGAAGCG +
Preference number: 5 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPEQVQN*GLFPEA
Trigger: CGCTTCCGGGAACAGTCCCAAGTTCTGTACCTGCTC...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGGGTCAGCTACTACCATaGGCTGTGGCAAAATGTGGC +
Preference number: 5 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQGQLLP*AVAKCG
Trigger: GCCACATTTTGCCACAGCCAATGGTAGTAGCTGACC...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp CCCCACTCAGGAGCTGGAAAATCTCTGCACATTCCATGGAAATCTTaGTGTAGCCCTCGACAACATCACACATGTCTTCCTGCGGTAGCT +
Preference number: 5 (lower is better)
Translates to: PHSGAGKSLHIPWKS*CSPRQHHTCLPAVA
Trigger: AGCTACCGCAGGAAGACATGTGTGATGTTGTCGAGGGCTACATCAAGATTTCCATGGAATGTGCAGAGATTTTCCAGCTCCTGAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp AGTCCTTGTGCGGAGCTCTATCAGCACACTTTGAGTGATGGCTTCTaGGTACTTTGCCAGAAGGCCCAACTGGCCCAGTTTATGGAGAAT +
Preference number: 5 (lower is better)
Translates to: SPCAELYQHTLSDGF*VLCQKAQLAQFMEN
Trigger: ATTCTCCATAAACTGGGCCAGTTGGGCCTTCTGGCAAAGTACTCAGAAGCCATCACTCAAAGTGTGCTGATAGAGCTCCGCACAAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp GAACTGGTAGAAGCCTGGCAGTTTGTCCATGTTCAAGTTCTCGTGTaGCAGCAGGAACTTGCTGATCTTCCAGTACATGTGCTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: ELVEAWQFVHVQVLV*QQELADLPVHVLLW
Trigger: CCAGAGGAGCACATGTACTGGAAGATCAGCAAGTTCCTGCTGTCACACGAGAACTTGAACATGGACAAACTGCCAGGCTTCTACCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp ATGTGGTTGTACAGCAGCTTCTTCACAATGTTGGCACCCACCACGTaGAAATGCGTAAGATCACTGGCTGTCCTCAGTAATATGGCCTCG +
Preference number: 5 (lower is better)
Translates to: MWLYSSFFTMLAPTT*KCVRSLAVLSNMAS
Trigger: CGAGGCCATATTACTGAGGACAGCCAGTGATCTTACGCATTTCCACGTGGTGGGTGCCAACATTGTGAAGAAGCTGCTGTACAACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCAGGGTGCTGGCTTCTaGGACAAACTCAGAAGCTTT +
Preference number: 5 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQQGAGF*DKLRSF
Trigger: AAAGCTTCTGAGTTTGTCCAAGAAGCCAGCACCCTG...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp TTAATACCAATCCATGACCAACCAGCACCTAGCTCCTCTGTCAGGGCCTTCAGGTGTGACAGCAGGAACTaGCTGATCTTCCAGTACATG +
Preference number: 5 (lower is better)
Translates to: LIPIHDQPAPSSSVRAFRCDSRN*LIFQYM
Trigger: CATGTACTGGAAGATCAGCAAGTTCCTGCTGTCACA...CCTGAAGGCCCTGACAGAGGAGCTAGGTGCTGGTTGGTCATGGATTGGTATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCTCCTCCGGCGCTTTGTaGCCCAGGTTGGTCACCCAC +
Preference number: 5 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFSSGAL*PRLVTH
Trigger: GTGGGTGACCAACCTGGGCAACAAAGCGCCGGAGGA...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp TGCGTAAGATCACTGGCTGTCCTCAGTAATATGGCCTCGAAAGCTTaGAATATTAACAGCATTTCACTCTCGGGCCGCTTCTCCCCACTC +
Preference number: 5 (lower is better)
Translates to: CVRSLAVLSNMASKA*NINSISLSGRFSPL
Trigger: GAGTGGGGAGAAGCGGCCCGAGAGTGAAATGCTGTTAATATTTCAAGCTTTCGAGGCCATATTACTGAGGACAGCCAGTGATCTTACGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp GCAGTTTGTCCATGTTCAAGTTCTCGTGTGACAGCAGGAACTTGCTaGTCTTCCAGTACATGTGCTCCTCTGGTTTCAAGATCTGCACGG +
Preference number: 5 (lower is better)
Translates to: AVCPCSSSRVTAGTC*SSSTCAPLVSRSAR
Trigger: CCGTGCAGATCTTGAAACCAGAGGAGCACATGTACTGGAAGATCAGCAAGTTCCTGCTGTCACACGAGAACTTGAACATGGACAAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 90 bp TTGTACAGCAGCTTCTTCACAATGTTGGCACCCACCACGTGGAAATaGGTAAGATCACTGGCTGTCCTCAGTAATATGGCCTCGAAAGCT +
Preference number: 5 (lower is better)
Translates to: LYSSFFTMLAPTTWK*VRSLAVLSNMASKA
Trigger: AGCTTTCGAGGCCATATTACTGAGGACAGCCAGTGATCTTACGCATTTCCACGTGGTGGGTGCCAACATTGTGAAGAAGCTGCTGTACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp TTAATACCAATCCATGACCAACCAGCACCTAGCTCCTCTGTCAGGGCCTTCAGGTTGCTGAAGTCAAAGTaGTACTGCATGATCACGTGG +
Preference number: 5 (lower is better)
Translates to: LIPIHDQPAPSSSVRAFRLLKSK*YCMITW
Trigger: CCACGTGATCATGCAGTACAACTTTGACTTCAGCAA...CCTGAAGGCCCTGACAGAGGAGCTAGGTGCTGGTTGGTCATGGATTGGTATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp GGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGTCAATGAGGCTCCACTaGTGTAAGAGGATCAGGACA +
Preference number: 5 (lower is better)
Translates to: GSASVTRSDYKGLLVGQLSMRLH*CKRIRT
Trigger: TGTCCTGATCCTCTTACACAAGTGGAGCCTCATTGA...CAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp AGGAGCTTTGTGGCACTGAGCAGAGTCTTCAAAAAGGTGAGGTCATaGTACCGAAATTTGAGTCCTGTCTTCACAAACTGCTGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: RSFVALSRVFKKVRS*YRNLSPVFTNCCQS
Trigger: TGACTGGCAGCAGTTTGTGAAGACAGGACTCAAATTTCGGTACCATGACCTCACCTTTTTGAAGACTCTGCTCAGTGCCACAAAGCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 90 bp TCCTCTTCTTCAGATGACAACATGGTTGGCAAAAACAGAGAGTGCTaGGTGAGCATCATGTGGACCACTGAAAGCTGGACAAGTTTCGTG +
Preference number: 5 (lower is better)
Translates to: SSSSDDNMVGKNREC*VSIMWTTESWTSFV
Trigger: CACGAAACTTGTCCAGCTTTCAGTGGTCCACATGATGCTCACCCAGCACTCTCTGTTTTTGCCAACCATGTTGTCATCTGAAGAAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCCCCTTTGAATCCCTCTaGGTCACCAAGGCAAACAAG +
Preference number: 5 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPPFESL*VTKANK
Trigger: CTTGTTTGCCTTGGTGACCAAGAGGGATTCAAAGGG...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGTGCTGCCAAAGTGACTaGCCCAGGCTCCGGCATGTC +
Preference number: 5 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQCCQSD*PRLRHV
Trigger: GACATGCCGGAGCCTGGGCAAGTCACTTTGGCAGCA...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGTCCTGCGGTAGCTTCTaGGCAGCAGAGACGAAGGCT +
Preference number: 5 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQSCGSF*AAETKA
Trigger: AGCCTTCGTCTCTGCTGCCAAGAAGCTACCGCAGGA...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGTACAGCAGTACCTGCTaGGCTGAGCGCAGCATGTGC +
Preference number: 5 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQYSSTC*AERSMC
Trigger: GCACATGCTGCGCTCAGCCAAGCAGGTACTGCTGTA...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCGAACCTGTCTCGCACTaGTCTCCACAGGGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFEPVSH*SPQGLQ
Trigger: TTGAAGGCCCTGTGGAGACAAGTGCGAGACAGGTTC...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGGCTTTGTTGCCCAGGTaGGTCACCCACAGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQALLPR*VTHRVC
Trigger: ACACACCCTGTGGGTGACCAACCTGGGCAACAAAGC...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCAGGATCAGGACATCTTaGGTAGAAAGTGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPRIRTS*VESATL
Trigger: CAAGGTGGCACTTTCTACCAAAGATGTCCTGATCCT...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp ACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAATAAAGTCCTCTTATGGCTTCTGAGTACTTaGCCAGAAGGCCCAACTGGC +
Preference number: 5 (lower is better)
Translates to: TRSDYKGLLVGQLNKVLLWLLST*PEGPTG
Trigger: GCCAGTTGGGCCTTCTGGCAAAGTACTCAGAAGCCA...TAAGAGGACTTTATTCAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGGCTGCTTGCCAGCAGTaGTACCAGGGTCTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQAACQQ*YQGLSK
Trigger: CTTGGAAAGACCCTGGTACAACTGCTGGCAAGCAGC...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGCGTCATGCACTCCCTTaGAATCCCTCTTGGTCACCA +
Preference number: 5 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQRHALP*NPSWSP
Trigger: TGGTGACCAAGAGGGATTCAAAGGGAGTGCATGACG...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp TTGCATGTATCAGTTTATGTCTGTCTCGGAACCCACTTAAGCTTCCTGGAACCCGAAAATGTGACTTCCTaGAAGTATTTGGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LHVSVYVCLGTHLSFLEPENVTS*KYLVSR
Trigger: CCTGCTGACCAAATACTTCAAGGAAGTCACATTTTC...GGGTTCCAGGAAGCTTAAGTGGGTTCCGAGACAGACATAAACTGATACATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp CCTGGCAGTGCCTCAGTCACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGATTTCAGAAGAATaGTTTCTGCAACATCATGCT +
Preference number: 5 (lower is better)
Translates to: PGSASVTRSDYKGLLVGQLISEE*FLQHHA
Trigger: AGCATGATGTTGCAGAAACAATTCTTCTGAAATCAG...CTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGTGACTGAGGCACTGCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp GATAATGCTGAGTGTTTTACAGGTATGCTGTCCAAATTTAATGCCTaGGTGAACATGATCTTATTGCACACCAGAGGCACTGTGGTCACC +
Preference number: 5 (lower is better)
Translates to: DNAECFTGMLSKFNA*VNMILLHTRGTVVT
Trigger: GGTGACCACAGTGCCTCTGGTGTGCAATAAGATCATGTTCACTCAGGCATTAAATTTGGACAGCATACCTGTAAAACACTCAGCATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 90 bp GAAGAGCTGAACAAATTCTTCCATCATCTCAGCTGTGTACACGTCTaGATCTTGCCATGTCTCTTTGTCCAGACAGTGGTCAACTGTTTT +
Preference number: 5 (lower is better)
Translates to: EELNKFFHHLSCVHV*ILPCLFVQTVVNCF
Trigger: AAAACAGTTGACCACTGTCTGGACAAAGAGACATGGCAAGATTCAGACGTGTACACAGCTGAGATGATGGAAGAATTTGTTCAGCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp GCAACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGGAGCTTCATGTGGTaGTACAGCAGCTTCTTCACA +
Preference number: 5 (lower is better)
Translates to: ATLHMCHVQPKTQELSHFRSFMW*YSSFFT
Trigger: TGTGAAGAAGCTGCTGTACAACCACATGAAGCTCCT...GAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTAACTTCCTTGAAGTATTaGGTCAGCAGGTCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLTSLKY*VSRSGH
Trigger: GTGCCCGGACCTGCTGACCAAATACTTCAAGGAAGT...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTAGACATCATCTGCATCTaGCTTCCCCATAGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLDIICI*LPHRGL
Trigger: CAGGCCTCTATGGGGAAGCAAGATGCAGATGATGTC...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGCTGATGAGGCTGAGGTaGTTCTGTTCATATGCACGG +
Preference number: 5 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQLMRLR*FCSYAR
Trigger: CCGTGCATATGAACAGAACAACCTCAGCCTCATCAG...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp ACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAATAAAGTCCTCTTAGTGAACATGATCTTATaGCACACCAGAGGCACTGTG +
Preference number: 5 (lower is better)
Translates to: TRSDYKGLLVGQLNKVLLVNMIL*HTRGTV
Trigger: CACAGTGCCTCTGGTGTGCAATAAGATCATGTTCAC...TAAGAGGACTTTATTCAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGGGCCTGCTCTTATCCTaGAGCATTTTCATTAGGTCC +
Preference number: 5 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQGLLLS*SIFIRS
Trigger: GGACCTAATGAAAATGCTCAAGGATAAGAGCAGGCC...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTAGCCACAAAAACTaGTTAGCAGGCAGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQFSHKN*LAGSSR
Trigger: CCTGGAACTGCCTGCTAACAAGTTTTTGTGGCTAAA...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGCAGATGACAACATGGTaGGCAAAAACAGAGAGTGCT +
Preference number: 5 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQQMTTW*AKTESA
Trigger: AGCACTCTCTGTTTTTGCCAACCATGTTGTCATCTG...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp AACTTTACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGATTTTCATTAGGTCCTaGGCTTGGTGCTGCTCAATG +
Preference number: 5 (lower is better)
Translates to: NFTHVSCTTEDTRAFTFQIFIRS*AWCCSM
Trigger: CATTGAGCAGCACCAAGCCAAGGACCTAATGAAAAT...CTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTAAGCTTAGTGGAGGACTaGAGCTGCAAATGGTTACTA +
Preference number: 5 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLSLVED*SCKWLL
Trigger: TAGTAACCATTTGCAGCTCAAGTCCTCCACTAAGCT...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp ACTAGATCTGACTATAAGGGCTTACTTGTTGGTCAGCTGAATAAAGTCCTCTTATCATGGTACCGAAATTaGAGTCCTGTCTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: TRSDYKGLLVGQLNKVLLSWYRN*SPVFTN
Trigger: GTTTGTGAAGACAGGACTCAAATTTCGGTACCATGA...TAAGAGGACTTTATTCAGCTGACCAACAAGTAAGCCCTTATAGTCAGATCTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGTTAAACCCAGGGCGTTaGAGTCCAAAAATTTTCGAC +
Preference number: 5 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQLNPGR*SPKIFD
Trigger: GTCGAAAATTTTTGGACTCAAACGCCCTGGGTTTAA...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp CAGCTGAATAAAGTCCTCTTAGCTTTCTTGCTGGAAAATAGTTGCATGTATCAGTTCTTGTTCAGTTTTTaGCTGGAAGTCAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: QLNKVLLAFLLENSCMYQFLFSF*LEVRAV
Trigger: TACAGCTCTGACTTCCAGCAAAAAACTGAACAAGAA...CTGATACATGCAACTATTTTCCAGCAAGAAAGCTAAGAGGACTTTATTCAGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS-3UTR CAA 90 bp TACACATGTGTCATGTACAACCGAAGACACAAGAGCTTTCACATTTCAGTTTTAAATCGGCCCATGTCCTaGAATAATTTTATGATGGTG +
Preference number: 5 (lower is better)
Translates to: YTCVMYNRRHKSFHISVLNRPMS*NNFMMV
Trigger: CACCATCATAAAATTATTCAAGGACATGGGCCGATT...TAAAACTGAAATGTGAAAGCTCTTGTGTCTTCGGTTGTACATGACACATGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp AACCGCACGCCCGTGAACTCCTCCGCTCGCGTTCGCTaGACTGTGCCAGCGGGGGACGCCGCGCTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: NRTPVNSSARVR*TVPAGDAALLG
Trigger: TCCCAGCAGCGCGGCGTCCCCCGCTGGCACAGTCAAGCGAACGCGAGCGGAGGAGTTCACGGGCGTGCGGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp AGGGTCTTGAACCGCACGCCCGTGAACTCCTCCGCTCGCGTTCGCTaGACTGTGCCAGCGGGGGACGCCGCGCTGCTGGGACCCTCTGAC +
Preference number: 6 (lower is better)
Translates to: RVLNRTPVNSSARVR*TVPAGDAALLGPSD
Trigger: GTCAGAGGGTCCCAGCAGCGCGGCGTCCCCCGCTGGCACAGTCAAGCGAACGCGAGCGGAGGAGTTCACGGGCGTGCGGTTCAAGACCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp GACTCGGCCCGGGCAGCCTCTAGCTTCTGCTGGTTCTaGGCGTCCAGCCGCTCAGCGTGGATGACCAGCTGC +
Preference number: 6 (lower is better)
Translates to: DSARAASSFCWF*ASSRSAWMTSC
Trigger: GCAGCTGGTCATCCACGCTGAGCGGCTGGACGCCCAGAACCAGCAGAAGCTAGAGGCTGCCCGGGCCGAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp GGTGGGTGCCGCTGTACTGAAGCAGGAGGCTGGCAATaGCCAGGGCTGTCTGTGTCCGTCGGGCCAGGCAGT +
Preference number: 6 (lower is better)
Translates to: GGCRCTEAGGWQ*PGLSVSVGPGS
Trigger: ACTGCCTGGCCCGACGGACACAGACAGCCCTGGGCATTGCCAGCCTCCTGCTTCAGTACAGCGGCACCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp AGATCCGACTCGGCCCGGGCAGCCTCTAGCTTCTGCTaGTTCTGGGCGTCCAGCCGCTCAGCGTGGATGACC +
Preference number: 6 (lower is better)
Translates to: RSDSARAASSFC*FWASSRSAWMT
Trigger: GGTCATCCACGCTGAGCGGCTGGACGCCCAGAACCAGCAGAAGCTAGAGGCTGCCCGGGCCGAGTCGGATCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp AAGAGATCCGACTCGGCCCGGGCAGCCTCTAGCTTCTaGTGGTTCTGGGCGTCCAGCCGCTCAGCGTGGATG +
Preference number: 6 (lower is better)
Translates to: KRSDSARAASSF*WFWASSRSAWM
Trigger: CATCCACGCTGAGCGGCTGGACGCCCAGAACCAGCAGAAGCTAGAGGCTGCCCGGGCCGAGTCGGATCTCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp GGGTCCAGCAGGCGGAGGATGTCCCCAACGCTTGGCTaGTGCCAAAGTGACTTGCCCAGGCTCCGGCATGTC +
Preference number: 6 (lower is better)
Translates to: GSSRRRMSPTLG*CQSDLPRLRHV
Trigger: GACATGCCGGAGCCTGGGCAAGTCACTTTGGCAGCAGCCAAGCGTTGGGGACATCCTCCGCCTGCTGGACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp TCCTCCGTGGGCAGCAGCTTCCGGTACTGCGGGAAGTaGAGGATGGTCTGCATCATCCGGTCTGGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: SSVGSSFRYCGK*RMVCIIRSGSS
Trigger: GCTGGACCCAGACCGGATGATGCAGACCATCCTGCACTTCCCGCAGTACCGGAAGCTGCTGCCCACGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp TTCCCAAGAGACTGTGTGCCTTGCTGGGTCAGCAGGTaGGCCTCTGGCAGGGCCAGTAGGGCCAGGGTGACT +
Preference number: 6 (lower is better)
Translates to: FPRDCVPCWVSR*ASGRASRARVT
Trigger: AGTCACCCTGGCCCTACTGGCCCTGCCAGAGGCCCACCTGCTGACCCAGCAAGGCACACAGTCTCTTGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp TCACAAGGTGGGTGCCGCTGTACTGAAGCAGGAGGCTaGCAATGCCCAGGGCTGTCTGTGTCCGTCGGGCCA +
Preference number: 6 (lower is better)
Translates to: SQGGCRCTEAGG*QCPGLSVSVGP
Trigger: TGGCCCGACGGACACAGACAGCCCTGGGCATTGCCAGCCTCCTGCTTCAGTACAGCGGCACCCACCTTGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp CTGCGGGAAGTGCAGGATGGTCTGCATCATCCGGTCTaGGTCCAGCAGGCGGAGGATGTCCCCAACGCTTGG +
Preference number: 6 (lower is better)
Translates to: LREVQDGLHHPV*VQQAEDVPNAW
Trigger: CCAAGCGTTGGGGACATCCTCCGCCTGCTGGACCCAGACCGGATGATGCAGACCATCCTGCACTTCCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp TGGGCAGCAGCTTCCGGTACTGCGGGAAGTGCAGGATaGTCTGCATCATCCGGTCTGGGTCCAGCAGGCGGA +
Preference number: 6 (lower is better)
Translates to: WAAASGTAGSAG*SASSGLGPAGG
Trigger: TCCGCCTGCTGGACCCAGACCGGATGATGCAGACCATCCTGCACTTCCCGCAGTACCGGAAGCTGCTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp CATCTTCTCGGATTCCTGGGAGCCGACCTGGCCAGGTaGCTGGCTTCTCTCCTCCGGCGCTTTGTTGCCCAG +
Preference number: 6 (lower is better)
Translates to: HLLGFLGADLAR*LASLLRRFVAQ
Trigger: CTGGGCAACAAAGCGCCGGAGGAGAGAAGCCAGCCACCTGGCCAGGTCGGCTCCCAGGAATCCGAGAAGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp CAGGCAAGGGGTCACCGGGCCCCCAGTGGGTCAGTGTaGCCCTCAGGAGGTCCTTGCATTTCTCCAAGCAAG +
Preference number: 6 (lower is better)
Translates to: QARGHRAPSGSV*PSGGPCISPSK
Trigger: CTTGCTTGGAGAAATGCAAGGACCTCCTGAGGGCCACACTGACCCACTGGGGGCCCGGTGACCCCTTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp GGGTCACCGGGCCCCCAGTGGGTCAGTGTGGCCCTCAGGAGGTCCTaGCATTTCTCCAAGCAAGATGCTTCCAGCTGGGGCTCAGCAGTC +
Preference number: 6 (lower is better)
Translates to: GSPGPQWVSVALRRS*HFSKQDASSWGSAV
Trigger: GACTGCTGAGCCCCAGCTGGAAGCATCTTGCTTGGAGAAATGCAAGGACCTCCTGAGGGCCACACTGACCCACTGGGGGCCCGGTGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp GCATCATCCGGTCTGGGTCCAGCAGGCGGAGGATGTCCCCAACGCTaGGCTGCTGCCAAAGTGACTTGCCCAGGCTCCGGCATGTCTTGT +
Preference number: 6 (lower is better)
Translates to: ASSGLGPAGGGCPQR*AAAKVTCPGSGMSC
Trigger: ACAAGACATGCCGGAGCCTGGGCAAGTCACTTTGGCAGCAGCCAAGCGTTGGGGACATCCTCCGCCTGCTGGACCCAGACCGGATGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp GAGCCGACCTGGCCAGGTGGCTGGCTTCTCTCCTCCGGCGCTTTGTaGCCCAGGTTGGTCACCCACAGGGTGTGTAACAAGGAGATCACG +
Preference number: 6 (lower is better)
Translates to: EPTWPGGWLLSSGAL*PRLVTHRVCNKEIT
Trigger: CGTGATCTCCTTGTTACACACCCTGTGGGTGACCAACCTGGGCAACAAAGCGCCGGAGGAGAGAAGCCAGCCACCTGGCCAGGTCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp TGGGAGCCGACCTGGCCAGGTGGCTGGCTTCTCTCCTCCGGCGCTTaGTTGCCCAGGTTGGTCACCCACAGGGTGTGTAACAAGGAGATC +
Preference number: 6 (lower is better)
Translates to: WEPTWPGGWLLSSGA*LPRLVTHRVCNKEI
Trigger: GATCTCCTTGTTACACACCCTGTGGGTGACCAACCTGGGCAACAAAGCGCCGGAGGAGAGAAGCCAGCCACCTGGCCAGGTCGGCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp AGGTACAGCAGTACCTGCTTGGCTGAGCGCAGCATGTaGTGCAGAGCCAGGCTTGGGACAGCGGCGAGAAGC +
Preference number: 6 (lower is better)
Translates to: RYSSTCLAERSM*CRARLGTAARS
Trigger: GCTTCTCGCCGCTGTCCCAAGCCTGGCTCTGCAGCACATGCTGCGCTCAGCCAAGCAGGTACTGCTGTACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp GGCCTCGCACATACTCGGCGCACCAGAGTAGCTCACTaGTCTGCAGCTGATCCTGGTGGCTGCTTGCCAGCA +
Preference number: 6 (lower is better)
Translates to: GLAHTRRTRVAH*SAADPGGCLPA
Trigger: TGCTGGCAAGCAGCCACCAGGATCAGCTGCAGAGCAGTGAGCTACTCTGGTGCGCCGAGTATGTGCGAGGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp TCCAGCAGGCGGAGGATGTCCCCAACGCTTGGCTGCTaGCAAAGTGACTTGCCCAGGCTCCGGCATGTCTTG +
Preference number: 6 (lower is better)
Translates to: SSRRRMSPTLGC*QSDLPRLRHVL
Trigger: CAAGACATGCCGGAGCCTGGGCAAGTCACTTTGGCAGCAGCCAAGCGTTGGGGACATCCTCCGCCTGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp AGCAGCTTCCGGTACTGCGGGAAGTGCAGGATGGTCTaGATCATCCGGTCTGGGTCCAGCAGGCGGAGGATG +
Preference number: 6 (lower is better)
Translates to: SSFRYCGKCRMV*IIRSGSSRRRM
Trigger: CATCCTCCGCCTGCTGGACCCAGACCGGATGATGCAGACCATCCTGCACTTCCCGCAGTACCGGAAGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp CTTGGCAGCAGAGACGAAGGCTTCCAAAGCCGGTCCTaGGCCCTGCGCATCCTTCAGCAGGGTCTTGAACCG +
Preference number: 6 (lower is better)
Translates to: LGSRDEGFQSRS*ALRILQQGLEP
Trigger: CGGTTCAAGACCCTGCTGAAGGATGCGCAGGGCCCAGGACCGGCTTTGGAAGCCTTCGTCTCTGCTGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp GAAGGAATACCGTGTCCAGCTCATGCTCAGCCAGAGTaGGGAGCAGAGCCCCCAGGCCTCGCACATACTCGG +
Preference number: 6 (lower is better)
Translates to: EGIPCPAHAQPE*GAEPPGLAHTR
Trigger: CCGAGTATGTGCGAGGCCTGGGGGCTCTGCTCCCCACTCTGGCTGAGCATGAGCTGGACACGGTATTCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp AAGGCAAGCATCTTCTCGGATTCCTGGGAGCCGACCTaGCCAGGTGGCTGGCTTCTCTCCTCCGGCGCTTTG +
Preference number: 6 (lower is better)
Translates to: KASIFSDSWEPT*PGGWLLSSGAL
Trigger: CAAAGCGCCGGAGGAGAGAAGCCAGCCACCTGGCCAGGTCGGCTCCCAGGAATCCGAGAAGATGCTTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp ACCTGGCCAGGTGGCTGGCTTCTCTCCTCCGGCGCTTaGTTGCCCAGGTTGGTCACCCACAGGGTGTGTAAC +
Preference number: 6 (lower is better)
Translates to: TWPGGWLLSSGA*LPRLVTHRVCN
Trigger: GTTACACACCCTGTGGGTGACCAACCTGGGCAACAAAGCGCCGGAGGAGAGAAGCCAGCCACCTGGCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp GGCCCCCAGTGGGTCAGTGTGGCCCTCAGGAGGTCCTaGCATTTCTCCAAGCAAGATGCTTCCAGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: GPQWVSVALRRS*HFSKQDASSWG
Trigger: GCCCCAGCTGGAAGCATCTTGCTTGGAGAAATGCAAGGACCTCCTGAGGGCCACACTGACCCACTGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp TGGGCCACCAACAACTGCAGCATGACCGTGCTGAACTaGCAGGCCACATCCTGTGCAGGTCCCACGAGGCCC +
Preference number: 6 (lower is better)
Translates to: WATNNCSMTVLN*QATSCAGPTRP
Trigger: GGGCCTCGTGGGACCTGCACAGGATGTGGCCTGCAAGTTCAGCACGGTCATGCTGCAGTTGTTGGTGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp GGGCCCACACTTCTGCCCAGCTGGCTGAAGTTCTCCACGGTGCTCTaGAGGTACAGCAGTACCTGCTTGGCTGAGCGCAGCATGTGCTGC +
Preference number: 6 (lower is better)
Translates to: GPTLLPSWLKFSTVL*RYSSTCLAERSMCC
Trigger: GCAGCACATGCTGCGCTCAGCCAAGCAGGTACTGCTGTACCTCAAGAGCACCGTGGAGAACTTCAGCCAGCTGGGCAGAAGTGTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp GGAGAAGCAGGAAGATGGCGGGAGTGTACATGGTCCTaGGCTGCTGGACACCTGCAGCGGCAAGGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: GEAGRWRECTWS*AAGHLQRQGLL
Trigger: CAAGAGGCCTTGCCGCTGCAGGTGTCCAGCAGCTCAGGACCATGTACACTCCCGCCATCTTCCTGCTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp CACGGTGCTCTTGAGGTACAGCAGTACCTGCTTGGCTaGGCGCAGCATGTGCTGCAGAGCCAGGCTTGGGAC +
Preference number: 6 (lower is better)
Translates to: HGALEVQQYLLG*AQHVLQSQAWD
Trigger: GTCCCAAGCCTGGCTCTGCAGCACATGCTGCGCTCAGCCAAGCAGGTACTGCTGTACCTCAAGAGCACCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp TGTGACCTCTGCCCTGCTGACAGGGCGCTCAGCCAATaGCCGAAGCACCCAGCTGGCCACCAAAGAAACAGC +
Preference number: 6 (lower is better)
Translates to: CDLCPADRALSQ*PKHPAGHQRNS
Trigger: GCTGTTTCTTTGGTGGCCAGCTGGGTGCTTCGGTCATTGGCTGAGCGCCCTGTCAGCAGGGCAGAGGTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp GGCACGTCCTTTGCAGCCTCACAGACCATTCGGATGTaGGCAAGGAAGGTATCTGGCTGCTGGGCCCCCAGC +
Preference number: 6 (lower is better)
Translates to: GTSFAASQTIRM*ARKVSGCWAPS
Trigger: GCTGGGGGCCCAGCAGCCAGATACCTTCCTTGCTCACATCCGAATGGTCTGTGAGGCTGCAAAGGACGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp AGGTGCTCCAGCCAGAGCTCCAGCTCTCTCCACGTGTaGTCGAACACACCCGTGTCCCGGAGGATCTTCATG +
Preference number: 6 (lower is better)
Translates to: RCSSQSSSSLHV*SNTPVSRRIFM
Trigger: CATGAAGATCCTCCGGGACACGGGTGTGTTCGAGCACACGTGGAGAGAGCTGGAGCTCTGGCTGGAGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp AGCAGGAAGATGGCGGGAGTGTACATGGTCCTGAGCTaGTGGACACCTGCAGCGGCAAGGCCTCTTGGGCTT +
Preference number: 6 (lower is better)
Translates to: SRKMAGVYMVLS*WTPAAARPLGL
Trigger: AAGCCCAAGAGGCCTTGCCGCTGCAGGTGTCCAGCAGCTCAGGACCATGTACACTCCCGCCATCTTCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp TACAGCAGTACCTGCTTGGCTGAGCGCAGCATGTGCTaGAGAGCCAGGCTTGGGACAGCGGCGAGAAGCTGT +
Preference number: 6 (lower is better)
Translates to: YSSTCLAERSMC*RARLGTAARSC
Trigger: ACAGCTTCTCGCCGCTGTCCCAAGCCTGGCTCTGCAGCACATGCTGCGCTCAGCCAAGCAGGTACTGCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp TCTAGGTGCTCCTGCAAGGTGGGCCCCACACCAGGCTaGCCACACCACAGCTCAAACTTCACAAGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: SRCSCKVGPTPG*PHHSSNFTRWV
Trigger: CACCCACCTTGTGAAGTTTGAGCTGTGGTGTGGGCAGCCTGGTGTGGGGCCCACCTTGCAGGAGCACCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp ACACATCTCTGGCAGCTTCAGGACCCTGGGTCACCATaGCAGTCATCAGGTCCAGGCAGGCTCGAGCCATCC +
Preference number: 6 (lower is better)
Translates to: THLWQLQDPGSP*QSSGPGRLEPS
Trigger: GGATGGCTCGAGCCTGCCTGGACCTGATGACTGCCATGGTGACCCAGGGTCCTGAAGCTGCCAGAGATGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp CTGCTTAAGGAGGCCCAGGAGGGACTGAAGCAGAGCTaGGCCCACACTTCTGCCCAGCTGGCTGAAGTTCTC +
Preference number: 6 (lower is better)
Translates to: LLKEAQEGLKQS*AHTSAQLAEVL
Trigger: GAGAACTTCAGCCAGCTGGGCAGAAGTGTGGGCCCAGCTCTGCTTCAGTCCCTCCTGGGCCTCCTTAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp GAGGTCCACTCTCGCAGTCTTGTCCTTAAACACCAGTaGCTCCCCTGTGTCCTCCGTGGGCAGCAGCTTCCG +
Preference number: 6 (lower is better)
Translates to: EVHSRSLVLKHQ*LPCVLRGQQLP
Trigger: CGGAAGCTGCTGCCCACGGAGGACACAGGGGAGCCACTGGTGTTTAAGGACAAGACTGCGAGAGTGGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp CTGACCATGTGCAAGGCAAGCATCTTCTCGGATTCCTaGGAGCCGACCTGGCCAGGTGGCTGGCTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: LTMCKASIFSDS*EPTWPGGWLLS
Trigger: GGAGAGAAGCCAGCCACCTGGCCAGGTCGGCTCCCAGGAATCCGAGAAGATGCTTGCCTTGCACATGGTCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp TGGCCAGGTGGCTGGCTTCTCTCCTCCGGCGCTTTGTaGCCCAGGTTGGTCACCCACAGGGTGTGTAACAAG +
Preference number: 6 (lower is better)
Translates to: WPGGWLLSSGAL*PRLVTHRVCNK
Trigger: CTTGTTACACACCCTGTGGGTGACCAACCTGGGCAACAAAGCGCCGGAGGAGAGAAGCCAGCCACCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp GCAGTACCTGCTTGGCTGAGCGCAGCATGTGCTGCAGAGCCAGGCTaGGGACAGCGGCGAGAAGCTGTGCCTGAACACTCTTATCCCCAA +
Preference number: 6 (lower is better)
Translates to: AVPAWLSAACAAEPG*GQRREAVPEHSYPQ
Trigger: TTGGGGATAAGAGTGTTCAGGCACAGCTTCTCGCCGCTGTCCCAAGCCTGGCTCTGCAGCACATGCTGCGCTCAGCCAAGCAGGTACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp TGGCTGAAGTTCTCCACGGTGCTCTTGAGGTACAGCAGTACCTGCTaGGCTGAGCGCAGCATGTGCTGCAGAGCCAGGCTTGGGACAGCG +
Preference number: 6 (lower is better)
Translates to: WLKFSTVLLRYSSTC*AERSMCCRARLGTA
Trigger: CGCTGTCCCAAGCCTGGCTCTGCAGCACATGCTGCGCTCAGCCAAGCAGGTACTGCTGTACCTCAAGAGCACCGTGGAGAACTTCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp TGGCCAGGTGGCTGGCTTCTCTCCTCCGGCGCTTTGTTGCCCAGGTaGGTCACCCACAGGGTGTGTAACAAGGAGATCACGTTGGACAGC +
Preference number: 6 (lower is better)
Translates to: WPGGWLLSSGALLPR*VTHRVCNKEITLDS
Trigger: GCTGTCCAACGTGATCTCCTTGTTACACACCCTGTGGGTGACCAACCTGGGCAACAAAGCGCCGGAGGAGAGAAGCCAGCCACCTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp TCCATGTACGGGTGCAGCTCTCGCAGGGCCTCCAGCTaGGGCAGAGTCTTGGGCGTTGAGGTTGAGTTCAGA +
Preference number: 6 (lower is better)
Translates to: SMYGCSSRRASS*GRVLGVEVEFR
Trigger: TCTGAACTCAACCTCAACGCCCAAGACTCTGCCTCAGCTGGAGGCCCTGCGAGAGCTGCACCCGTACATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp TGCCAAAGTGACTTGCCCAGGCTCCGGCATGTCTTGTaGTGTTCCACTGCTGCTGGGCCCCACAGCAGAACC +
Preference number: 6 (lower is better)
Translates to: CQSDLPRLRHVL*CSTAAGPHSRT
Trigger: GGTTCTGCTGTGGGGCCCAGCAGCAGTGGAACATCACAAGACATGCCGGAGCCTGGGCAAGTCACTTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp GCGGAGGATGTCCCCAACGCTTGGCTGCTGCCAAAGTaGCTTGCCCAGGCTCCGGCATGTCTTGTGATGTTC +
Preference number: 6 (lower is better)
Translates to: AEDVPNAWLLPK*LAQAPACLVMF
Trigger: GAACATCACAAGACATGCCGGAGCCTGGGCAAGTCACTTTGGCAGCAGCCAAGCGTTGGGGACATCCTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp AGTAGGCTGCAGCTCGCATCTGGGGGTCGTAGCTGCTaGGGGCTGCCACAGTTAAACCCAGGGCGTTTGAGT +
Preference number: 6 (lower is better)
Translates to: SRLQLASGGRSC*GLPQLNPGRLS
Trigger: ACTCAAACGCCCTGGGTTTAACTGTGGCAGCCCTCAGCAGCTACGACCCCCAGATGCGAGCTGCAGCCTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp TTGGGACTGTTCCCGGAAGCGAGCTCCCTCCAGGTGTaGGTAGTAGGCTGCGAGGACATAGTAGGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: LGLFPEASSLQV*VVGCEDIVGCS
Trigger: GCTGCAGCCTACTATGTCCTCGCAGCCTACTACTCACACCTGGAGGGAGCTCGCTTCCGGGAACAGTCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp GCTGCCCACACCACAGCTCAAACTTCACAAGGTGGGTaGCGCTGTACTGAAGCAGGAGGCTGGCAATGCCCA +
Preference number: 6 (lower is better)
Translates to: AAHTTAQTSQGG*RCTEAGGWQCP
Trigger: TGGGCATTGCCAGCCTCCTGCTTCAGTACAGCGGCACCCACCTTGTGAAGTTTGAGCTGTGGTGTGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp GCCCAGGCTCCGGCATGTCTTGTGATGTTCCACTGCTaGTGGGCCCCACAGCAGAACCCTGAAACTGATGAG +
Preference number: 6 (lower is better)
Translates to: AQAPACLVMFHC*WAPQQNPETDE
Trigger: CTCATCAGTTTCAGGGTTCTGCTGTGGGGCCCAGCAGCAGTGGAACATCACAAGACATGCCGGAGCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp AAAGGGCTCTCTTTCCGGCCCTGGGCCACCAACAACTaGAGCATGACCGTGCTGAACTTGCAGGCCACATCC +
Preference number: 6 (lower is better)
Translates to: KGLSFRPWATNN*SMTVLNLQATS
Trigger: GGATGTGGCCTGCAAGTTCAGCACGGTCATGCTGCAGTTGTTGGTGGCCCAGGGCCGGAAAGAGAGCCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp CTCGCAGGGCCTCCAGCTGAGGCAGAGTCTTGGGCGTaGAGGTTGAGTTCAGAGTCCTTGTGCGGAGCTCTA +
Preference number: 6 (lower is better)
Translates to: LAGPPAEAESWA*RLSSESLCGAL
Trigger: TAGAGCTCCGCACAAGGACTCTGAACTCAACCTCAACGCCCAAGACTCTGCCTCAGCTGGAGGCCCTGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp GCTCTCGCAGGGCCTCCAGCTGAGGCAGAGTCTTGGGCGTTGAGGTaGAGTTCAGAGTCCTTGTGCGGAGCTCTATCAGCACACTTTGAG +
Preference number: 6 (lower is better)
Translates to: ALAGPPAEAESWALR*SSESLCGALSAHFE
Trigger: CTCAAAGTGTGCTGATAGAGCTCCGCACAAGGACTCTGAACTCAACCTCAACGCCCAAGACTCTGCCTCAGCTGGAGGCCCTGCGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp TTGAGCATGTGGTGCTGCAGGATGGGCGGGACCTCCTaGGAAGGGCCCTGCTCAGAGATGATGCCTTTTAGG +
Preference number: 6 (lower is better)
Translates to: LSMWCCRMGGTS*EGPCSEMMPFR
Trigger: CCTAAAAGGCATCATCTCTGAGCAGGGCCCTTCTCAGGAGGTCCCGCCCATCCTGCAGCACCACATGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp CTGCAGAGCCAGGCTTGGGACAGCGGCGAGAAGCTGTaGCTGAACACTCTTATCCCCAAGTGTCTGGCTTTC +
Preference number: 6 (lower is better)
Translates to: LQSQAWDSGEKL*LNTLIPKCLAF
Trigger: GAAAGCCAGACACTTGGGGATAAGAGTGTTCAGGCACAGCTTCTCGCCGCTGTCCCAAGCCTGGCTCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp AAGTTCTCCACGGTGCTCTTGAGGTACAGCAGTACCTaGTTGGCTGAGCGCAGCATGTGCTGCAGAGCCAGG +
Preference number: 6 (lower is better)
Translates to: KFSTVLLRYSST*LAERSMCCRAR
Trigger: CCTGGCTCTGCAGCACATGCTGCGCTCAGCCAAGCAGGTACTGCTGTACCTCAAGAGCACCGTGGAGAACTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp AGGTACACATGGATAAGGGGGAAGAAGTCATCTAGGTaGTCCTGCAAGGTGGGCCCCACACCAGGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: RYTWIRGKKSSR*SCKVGPTPGCP
Trigger: TGGGCAGCCTGGTGTGGGGCCCACCTTGCAGGAGCACCTAGATGACTTCTTCCCCCTTATCCATGTGTACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp CTTGCCCAGGCTCCGGCATGTCTTGTGATGTTCCACTaGTGCTGGGCCCCACAGCAGAACCCTGAAACTGAT +
Preference number: 6 (lower is better)
Translates to: LAQAPACLVMFH*CWAPQQNPETD
Trigger: ATCAGTTTCAGGGTTCTGCTGTGGGGCCCAGCAGCAGTGGAACATCACAAGACATGCCGGAGCCTGGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp GGATGTCCCCAACGCTTGGCTGCTGCCAAAGTGACTTaGCCAGGCTCCGGCATGTCTTGTGATGTTCCACTG +
Preference number: 6 (lower is better)
Translates to: GCPQRLAAAKVT*PGSGMSCDVPL
Trigger: CAGTGGAACATCACAAGACATGCCGGAGCCTGGGCAAGTCACTTTGGCAGCAGCCAAGCGTTGGGGACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp AGCGAGTCAAGCACTGGGCTGAGGAGTCCACGTTCCTaGAGAGCACAACAATGGCCTCGGGCTCATCAAGTG +
Preference number: 6 (lower is better)
Translates to: SESSTGLRSPRS*RAQQWPRAHQV
Trigger: CACTTGATGAGCCCGAGGCCATTGTTGTGCTCTGCAGGAACGTGGACTCCTCAGCCCAGTGCTTGACTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp CAGGCTCCGGCATGTCTTGTGATGTTCCACTGCTGCTaGGCCCCACAGCAGAACCCTGAAACTGATGAGGCT +
Preference number: 6 (lower is better)
Translates to: QAPACLVMFHCC*APQQNPETDEA
Trigger: AGCCTCATCAGTTTCAGGGTTCTGCTGTGGGGCCCAGCAGCAGTGGAACATCACAAGACATGCCGGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp GCTGGCTTCTCTCCTCCGGCGCTTTGTTGCCCAGGTTaGTCACCCACAGGGTGTGTAACAAGGAGATCACGT +
Preference number: 6 (lower is better)
Translates to: AGFSPPALCCPG*SPTGCVTRRSR
Trigger: ACGTGATCTCCTTGTTACACACCCTGTGGGTGACCAACCTGGGCAACAAAGCGCCGGAGGAGAGAAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp GGGCCTCCAGCTGAGGCAGAGTCTTGGGCGTTGAGGTaGAGTTCAGAGTCCTTGTGCGGAGCTCTATCAGCA +
Preference number: 6 (lower is better)
Translates to: GPPAEAESWALR*SSESLCGALSA
Trigger: TGCTGATAGAGCTCCGCACAAGGACTCTGAACTCAACCTCAACGCCCAAGACTCTGCCTCAGCTGGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp AGGCACTGTGGTCACCATCACCATCGCCAGGAGCCTTaGCAATGGGATAAACTCTCTGGTCCAAAAGGCCGG +
Preference number: 6 (lower is better)
Translates to: RHCGHHHHRQEP*QWDKLSGPKGR
Trigger: CCGGCCTTTTGGACCAGAGAGTTTATCCCATTGCCAAGGCTCCTGGCGATGGTGATGGTGACCACAGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp CATTGCCTTCTCGTGCTCCTGGGTGTTTTCATCTTCTaGCTCCCTGCCACTGAAGGACACAGCCAGCCACTG +
Preference number: 6 (lower is better)
Translates to: HCLLVLLGVFIF*LPATEGHSQPL
Trigger: CAGTGGCTGGCTGTGTCCTTCAGTGGCAGGGAGCCAGAAGATGAAAACACCCAGGAGCACGAGAAGGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp ATCCCATTGCGGACAACATCGAGCAGGTACAGAACTTaGGACTGTTCCCGGAAGCGAGCTCCCTCCAGGTGT +
Preference number: 6 (lower is better)
Translates to: IPLRTTSSRYRT*DCSRKRAPSRC
Trigger: ACACCTGGAGGGAGCTCGCTTCCGGGAACAGTCCCAAGTTCTGTACCTGCTCGATGTTGTCCGCAATGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp CACGGCGCTGTCCCCGAGAAGGTCAGCTACTACCATTaGCTGTGGCAAAATGTGGCTCTTGAGCCAGTCAAG +
Preference number: 6 (lower is better)
Translates to: HGAVPEKVSYYH*LWQNVALEPVK
Trigger: CTTGACTGGCTCAAGAGCCACATTTTGCCACAGCCAATGGTAGTAGCTGACCTTCTCGGGGACAGCGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp GCCTCGGGGCCTTCCTGTGCCTTTAGCCACAAAAACTaGTTAGCAGGCAGTTCCAGGGCCACCTTGAGCATG +
Preference number: 6 (lower is better)
Translates to: ASGPSCAFSHKN*LAGSSRATLSM
Trigger: CATGCTCAAGGTGGCCCTGGAACTGCCTGCTAACAAGTTTTTGTGGCTAAAGGCACAGGAAGGCCCCGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp AGCAGAGGATACTCCTGTTGGCCGCATGAAGCTTCCTaGCGCCCTGTGCTGGAGGTACACATGGATAAGGGG +
Preference number: 6 (lower is better)
Translates to: SRGYSCWPHEAS*RPVLEVHMDKG
Trigger: CCCCTTATCCATGTGTACCTCCAGCACAGGGCGCAAGGAAGCTTCATGCGGCCAACAGGAGTATCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp AATCCCATTGCGGACAACATCGAGCAGGTACAGAACTaGGGACTGTTCCCGGAAGCGAGCTCCCTCCAGGTG +
Preference number: 6 (lower is better)
Translates to: NPIADNIEQVQN*GLFPEASSLQV
Trigger: CACCTGGAGGGAGCTCGCTTCCGGGAACAGTCCCAAGTTCTGTACCTGCTCGATGTTGTCCGCAATGGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp AGGAGTGACAGCAGAGGATACTCCTGTTGGCCGCATGAAGCTTCCTaGCGCCCTGTGCTGGAGGTACACATGGATAAGGGGGAAGAAGTC +
Preference number: 6 (lower is better)
Translates to: RSDSRGYSCWPHEAS*RPVLEVHMDKGEEV
Trigger: GACTTCTTCCCCCTTATCCATGTGTACCTCCAGCACAGGGCGCAAGGAAGCTTCATGCGGCCAACAGGAGTATCCTCTGCTGTCACTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp AGGGCCACGGTGAAAGGGAGCCTCAGGTTTGGAGTTCTAATCCCATaGCGGACAACATCGAGCAGGTACAGAACTTGGGACTGTTCCCGG +
Preference number: 6 (lower is better)
Translates to: RATVKGSLRFGVLIP*RTTSSRYRTWDCSR
Trigger: CCGGGAACAGTCCCAAGTTCTGTACCTGCTCGATGTTGTCCGCAATGGGATTAGAACTCCAAACCTGAGGCTCCCTTTCACCGTGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp CAGGTCCGGGCACACCTTCAGAATGCTCACCACAAGTaGGGCCACCAGGTCATCACCAGCTGCAGTTTTCAA +
Preference number: 6 (lower is better)
Translates to: QVRAHLQNAHHK*GHQVITSCSFQ
Trigger: TTGAAAACTGCAGCTGGTGATGACCTGGTGGCCTCACTTGTGGTGAGCATTCTGAAGGTGTGCCCGGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp GGGCCTGGGCAGCTACCACAGGCCTGCTCTTATCCTTaGGCATTTTCATTAGGTCCTTGGCTTGGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: GPGQLPQACSYP*AFSLGPWLGAA
Trigger: AGCAGCACCAAGCCAAGGACCTAATGAAAATGCTCAAGGATAAGAGCAGGCCTGTGGTAGCTGCCCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp ACTCCTGTTGGCCGCATGAAGCTTCCTTGCGCCCTGTaGTGGAGGTACACATGGATAAGGGGGAAGAAGTCA +
Preference number: 6 (lower is better)
Translates to: TPVGRMKLPCAL*WRYTWIRGKKS
Trigger: TGACTTCTTCCCCCTTATCCATGTGTACCTCCAGCACAGGGCGCAAGGAAGCTTCATGCGGCCAACAGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp TGCTGCCAGTCACCAGGGTCAACCTCCTTAACCGCATaGAACAACTCGCTTAACCGGACCAGCATTGCCTTC +
Preference number: 6 (lower is better)
Translates to: CCQSPGSTSLTA*NNSLNRTSIAF
Trigger: GAAGGCAATGCTGGTCCGGTTAAGCGAGTTGTTGCATGCGGTTAAGGAGGTTGACCCTGGTGACTGGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp GTACATGTGCTCCTCTGGTTTCAAGATCTGCACGGCTaGCTTGGCGATGAAAAGGGCCACGGTGAAAGGGAG +
Preference number: 6 (lower is better)
Translates to: VHVLLWFQDLHG*LGDEKGHGERE
Trigger: CTCCCTTTCACCGTGGCCCTTTTCATCGCCAAGGCAGCCGTGCAGATCTTGAAACCAGAGGAGCACATGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp CGACAACATCACACATGTCTTCCTGCGGTAGCTTCTTaGCAGCAGAGACGAAGGCTTCCAAAGCCGGTCCTG +
Preference number: 6 (lower is better)
Translates to: RQHHTCLPAVAS*QQRRRLPKPVL
Trigger: CAGGACCGGCTTTGGAAGCCTTCGTCTCTGCTGCCAAGAAGCTACCGCAGGAAGACATGTGTGATGTTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp GACTGGAGCAGAAGACACAGAGCTAGGGGGTCCCTCTaGGTATGGAGAAGGTCGGTCAACACTGCAGTCATA +
Preference number: 6 (lower is better)
Translates to: DWSRRHRARGSL*VWRRSVNTAVI
Trigger: TATGACTGCAGTGTTGACCGACCTTCTCCATACCCAGAGGGACCCCCTAGCTCTGTGTCTTCTGCTCCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp CCTGTTGGCCGCATGAAGCTTCCTTGCGCCCTGTGCTaGAGGTACACATGGATAAGGGGGAAGAAGTCATCT +
Preference number: 6 (lower is better)
Translates to: PVGRMKLPCALC*RYTWIRGKKSS
Trigger: AGATGACTTCTTCCCCCTTATCCATGTGTACCTCCAGCACAGGGCGCAAGGAAGCTTCATGCGGCCAACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp TCGCTTAACCGGACCAGCATTGCCTTCTCGTGCTCCTaGGTGTTTTCATCTTCTGGCTCCCTGCCACTGAAG +
Preference number: 6 (lower is better)
Translates to: SLNRTSIAFSCS*VFSSSGSLPLK
Trigger: CTTCAGTGGCAGGGAGCCAGAAGATGAAAACACCCAGGAGCACGAGAAGGCAATGCTGGTCCGGTTAAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp GAGTGCTGGGTGAGCATCATGTGGACCACTGAAAGCTaGACAAGTTTCGTGCGCCCAGAGCTTTCTGGACCA +
Preference number: 6 (lower is better)
Translates to: ECWVSIMWTTES*TSFVRPELSGP
Trigger: TGGTCCAGAAAGCTCTGGGCGCACGAAACTTGTCCAGCTTTCAGTGGTCCACATGATGCTCACCCAGCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp GTCCGAAGCGTGTTGGGTAAATGGTCCATGAGGACATGCAGATCCTaGGTTCTTGCAAATGGAATGAGCTGGGCCAGGGCCTCCAGATGC +
Preference number: 6 (lower is better)
Translates to: VRSVLGKWSMRTCRS*VLANGMSWARASRC
Trigger: GCATCTGGAGGCCCTGGCCCAGCTCATTCCATTTGCAAGAACCAAGGATCTGCATGTCCTCATGGACCATTTACCCAACACGCTTCGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp TTCCAGTACATGTGCTCCTCTGGTTTCAAGATCTGCACGGCTGCCTaGGCGATGAAAAGGGCCACGGTGAAAGGGAGCCTCAGGTTTGGA +
Preference number: 6 (lower is better)
Translates to: FQYMCSSGFKICTAA*AMKRATVKGSLRFG
Trigger: TCCAAACCTGAGGCTCCCTTTCACCGTGGCCCTTTTCATCGCCAAGGCAGCCGTGCAGATCTTGAAACCAGAGGAGCACATGTACTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp GGGCCGCTTCTCCCCACTCAGGAGCTGGAAAATCTCTaGACATTCCATGGAAATCTTGATGTAGCCCTCGAC +
Preference number: 6 (lower is better)
Translates to: GPLLPTQELENL*TFHGNLDVALD
Trigger: GTCGAGGGCTACATCAAGATTTCCATGGAATGTGCAGAGATTTTCCAGCTCCTGAGTGGGGAGAAGCGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp GGGGTCCCTCTGGGTATGGAGAAGGTCGGTCAACACTaGAGTCATATATGCCATGATGCTTTCCCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: GVPLGMEKVGQH*SHICHDAFPCF
Trigger: GAAGCAGGGGAAAGCATCATGGCATATATGACTGCAGTGTTGACCGACCTTCTCCATACCCAGAGGGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp AACAACTCGCTTAACCGGACCAGCATTGCCTTCTCGTaGTCCTGGGTGTTTTCATCTTCTGGCTCCCTGCCA +
Preference number: 6 (lower is better)
Translates to: NNSLNRTSIAFS*SWVFSSSGSLP
Trigger: TGGCAGGGAGCCAGAAGATGAAAACACCCAGGAGCACGAGAAGGCAATGCTGGTCCGGTTAAGCGAGTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp GATCCATCAGGAAGTTATGAACGAGGTCCCTCACCATaGCTTTCCCCGCCTCTTCAGCTGATATCGCAGCAC +
Preference number: 6 (lower is better)
Translates to: DPSGSYERGPSP*LSPPLQLISQH
Trigger: GTGCTGCGATATCAGCTGAAGAGGCGGGGAAAGCCATGGTGAGGGACCTCGTTCATAACTTCCTGATGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp TGTGGTCACCATCACCATCGCCAGGAGCCTTGGCAATaGGATAAACTCTCTGGTCCAAAAGGCCGGGGAAAT +
Preference number: 6 (lower is better)
Translates to: CGHHHHRQEPWQ*DKLSGPKGRGN
Trigger: ATTTCCCCGGCCTTTTGGACCAGAGAGTTTATCCCATTGCCAAGGCTCCTGGCGATGGTGATGGTGACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp AGCAGAAGACACAGAGCTAGGGGGTCCCTCTGGGTATaGAGAAGGTCGGTCAACACTGCAGTCATATATGCC +
Preference number: 6 (lower is better)
Translates to: SRRHRARGSLWV*RRSVNTAVIYA
Trigger: GGCATATATGACTGCAGTGTTGACCGACCTTCTCCATACCCAGAGGGACCCCCTAGCTCTGTGTCTTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp ATGAAGCTTCCTTGCGCCCTGTGCTGGAGGTACACATaGATAAGGGGGAAGAAGTCATCTAGGTGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: MKLPCALCWRYT*IRGKKSSRCSC
Trigger: GCAGGAGCACCTAGATGACTTCTTCCCCCTTATCCATGTGTACCTCCAGCACAGGGCGCAAGGAAGCTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp TCGACAACATCACACATGTCTTCCTGCGGTAGCTTCTaGGCAGCAGAGACGAAGGCTTCCAAAGCCGGTCCT +
Preference number: 6 (lower is better)
Translates to: STTSHMSSCGSF*AAETKASKAGP
Trigger: AGGACCGGCTTTGGAAGCCTTCGTCTCTGCTGCCAAGAAGCTACCGCAGGAAGACATGTGTGATGTTGTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp ACTGGATGTAGGCCAGCCGGACGTCATGCACTCCCTTaGAATCCCTCTTGGTCACCAAGGCAAACAAGGCTT +
Preference number: 6 (lower is better)
Translates to: TGCRPAGRHALP*NPSWSPRQTRL
Trigger: AAGCCTTGTTTGCCTTGGTGACCAAGAGGGATTCAAAGGGAGTGCATGACGTCCGGCTGGCCTACATCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp ACTCTTATCCCCAAGTGTCTGGCTTTCATAGGCTGTTaGCAGCAGCGTGGAGAAGCAGGAAGATGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: TLIPKCLAFIGC*QQRGEAGRWRE
Trigger: CTCCCGCCATCTTCCTGCTTCTCCACGCTGCTGCAAACAGCCTATGAAAGCCAGACACTTGGGGATAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp TTGCCAGAAGGCCCAACTGGCCCAGTTTATGGAGAATaGGGGAACTTGCCACCAGTAGCTGAAGAACCCCTG +
Preference number: 6 (lower is better)
Translates to: LPEGPTGPVYGE*GNLPPVAEEPL
Trigger: CAGGGGTTCTTCAGCTACTGGTGGCAAGTTCCCCAATTCTCCATAAACTGGGCCAGTTGGGCCTTCTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp TGCCTGAACACTCTTATCCCCAAGTGTCTGGCTTTCATAGGCTGTTaGCAGCAGCGTGGAGAAGCAGGAAGATGGCGGGAGTGTACATGG +
Preference number: 6 (lower is better)
Translates to: CLNTLIPKCLAFIGC*QQRGEAGRWRECTW
Trigger: CCATGTACACTCCCGCCATCTTCCTGCTTCTCCACGCTGCTGCAAACAGCCTATGAAAGCCAGACACTTGGGGATAAGAGTGTTCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp AGTTTATGGAGAATTGGGGAACTTGCCACCAGTAGCTaGAGAACCCCTGCACTGAAGTGGGCTGCTAGGAGC +
Preference number: 6 (lower is better)
Translates to: SLWRIGELATSS*RTPALKWAARS
Trigger: GCTCCTAGCAGCCCACTTCAGTGCAGGGGTTCTTCAGCTACTGGTGGCAAGTTCCCCAATTCTCCATAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp GCGGAGCTCTATCAGCACACTTTGAGTGATGGCTTCTaGGTACTTTGCCAGAAGGCCCAACTGGCCCAGTTT +
Preference number: 6 (lower is better)
Translates to: AELYQHTLSDGF*VLCQKAQLAQF
Trigger: AAACTGGGCCAGTTGGGCCTTCTGGCAAAGTACTCAGAAGCCATCACTCAAAGTGTGCTGATAGAGCTCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp GCTGCTGAGACAGAGTCAGCCAGGGTCCAACTCTTGTaGTTACTCAGAGTCCGAAGCGTGTTGGGTAAATGG +
Preference number: 6 (lower is better)
Translates to: AAETESARVQLL*LLRVRSVLGKW
Trigger: CCATTTACCCAACACGCTTCGGACTCTGAGTAATCACAAGAGTTGGACCCTGGCTGACTCTGTCTCAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp CACGGAGGAGAAGTAAAATCTTCTGGTCCAGCACACTaGGGGTGGCACTGTAGGTCCCAAGTAGCACAGCAA +
Preference number: 6 (lower is better)
Translates to: HGGEVKSSGPAH*GWHCRSQVAQQ
Trigger: TTGCTGTGCTACTTGGGACCTACAGTGCCACCCTCAGTGTGCTGGACCAGAAGATTTTACTTCTCCTCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp TTCATCAGCTGGGCAGAAGCCAAGGTGGGCCTCAGGTaGTTTGTAAGCGCAATGAGGACATACAGGAACTCA +
Preference number: 6 (lower is better)
Translates to: FISWAEAKVGLR*FVSAMRTYRNS
Trigger: TGAGTTCCTGTATGTCCTCATTGCGCTTACAAAGCACCTGAGGCCCACCTTGGCTTCTGCCCAGCTGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp GTGATGGCTTCTGAGTACTTTGCCAGAAGGCCCAACTaGCCCAGTTTATGGAGAATTGGGGAACTTGCCACC +
Preference number: 6 (lower is better)
Translates to: VMASEYFARRPN*PSLWRIGELAT
Trigger: GGTGGCAAGTTCCCCAATTCTCCATAAACTGGGCCAGTTGGGCCTTCTGGCAAAGTACTCAGAAGCCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp ACATGCAGATCCTTGGTTCTTGCAAATGGAATGAGCTaGGCCAGGGCCTCCAGATGCAGCGCATCTTTGGAA +
Preference number: 6 (lower is better)
Translates to: TCRSLVLANGMS*ARASRCSASLE
Trigger: TTCCAAAGATGCGCTGCATCTGGAGGCCCTGGCCCAGCTCATTCCATTTGCAAGAACCAAGGATCTGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp GATGAAAAGGGCCACGGTGAAAGGGAGCCTCAGGTTTaGAGTTCTAATCCCATTGCGGACAACATCGAGCAG +
Preference number: 6 (lower is better)
Translates to: DEKGHGEREPQV*SSNPIADNIEQ
Trigger: CTGCTCGATGTTGTCCGCAATGGGATTAGAACTCCAAACCTGAGGCTCCCTTTCACCGTGGCCCTTTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp GTGTTGGGTAAATGGTCCATGAGGACATGCAGATCCTaGGTTCTTGCAAATGGAATGAGCTGGGCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: VLGKWSMRTCRS*VLANGMSWARA
Trigger: GGCCCTGGCCCAGCTCATTCCATTTGCAAGAACCAAGGATCTGCATGTCCTCATGGACCATTTACCCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp TCACAGAGGAGCTTCATGTGGTTGTACAGCAGCTTCTTCACAATGTaGGCACCCACCACGTGGAAATGCGTAAGATCACTGGCTGTCCTC +
Preference number: 6 (lower is better)
Translates to: SQRSFMWLYSSFFTM*APTTWKCVRSLAVL
Trigger: GAGGACAGCCAGTGATCTTACGCATTTCCACGTGGTGGGTGCCAACATTGTGAAGAAGCTGCTGTACAACCACATGAAGCTCCTCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp GCTACCACAGGCCTGCTCTTATCCTTGAGCATTTTCATTAGGTCCTaGGCTTGGTGCTGCTCAATGACTGCTTTCAGCTCTCCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: ATTGLLLSLSIFIRS*AWCCSMTAFSSPWS
Trigger: GCTCCAAGGAGAGCTGAAAGCAGTCATTGAGCAGCACCAAGCCAAGGACCTAATGAAAATGCTCAAGGATAAGAGCAGGCCTGTGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp GGAGAAGGTCGGTCAACACTGCAGTCATATATGCCATaGTGCTTTCCCCTGCTTCACAGTCTGTCCCAAGGA +
Preference number: 6 (lower is better)
Translates to: GEGRSTLQSYMP*CFPLLHSLSQG
Trigger: TCCTTGGGACAGACTGTGAAGCAGGGGAAAGCATCATGGCATATATGACTGCAGTGTTGACCGACCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp GAGTCCTTGTGCGGAGCTCTATCAGCACACTTTGAGTaGTGGCTTCTGAGTACTTTGCCAGAAGGCCCAACT +
Preference number: 6 (lower is better)
Translates to: ESLCGALSAHFE*WLLSTLPEGPT
Trigger: AGTTGGGCCTTCTGGCAAAGTACTCAGAAGCCATCACTCAAAGTGTGCTGATAGAGCTCCGCACAAGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp CAGGAACTTGCTGATCTTCCAGTACATGTGCTCCTCTaGTTTCAAGATCTGCACGGCTGCCTTGGCGATGAA +
Preference number: 6 (lower is better)
Translates to: QELADLPVHVLL*FQDLHGCLGDE
Trigger: TTCATCGCCAAGGCAGCCGTGCAGATCTTGAAACCAGAGGAGCACATGTACTGGAAGATCAGCAAGTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp GCTTGGTGCTGCTCAATGACTGCTTTCAGCTCTCCTTaGAGCTTCGTGTCTCTTTCAATGAGGCTCCACTTG +
Preference number: 6 (lower is better)
Translates to: AWCCSMTAFSSP*SFVSLSMRLHL
Trigger: CAAGTGGAGCCTCATTGAAAGAGACACGAAGCTCCAAGGAGAGCTGAAAGCAGTCATTGAGCAGCACCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp TGTTTAAGGATAGCCAGCAGCAGCTCCTCTATCGTCTaGTCAGTAGCCAACTCAAGGGAAGCCACAGACTCC +
Preference number: 6 (lower is better)
Translates to: CLRIASSSSSIV*SVANSREATDS
Trigger: GGAGTCTGTGGCTTCCCTTGAGTTGGCTACTGACAAGACGATAGAGGAGCTGCTGCTGGCTATCCTTAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp GGCTTGGTGCTGCTCAATGACTGCTTTCAGCTCTCCTaGGAGCTTCGTGTCTCTTTCAATGAGGCTCCACTT +
Preference number: 6 (lower is better)
Translates to: GLVLLNDCFQLS*ELRVSFNEAPL
Trigger: AAGTGGAGCCTCATTGAAAGAGACACGAAGCTCCAAGGAGAGCTGAAAGCAGTCATTGAGCAGCACCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp AGCTTCTTCACAATGTTGGCACCCACCACGTGGAAATaGGTAAGATCACTGGCTGTCCTCAGTAATATGGCC +
Preference number: 6 (lower is better)
Translates to: SFFTMLAPTTWK*VRSLAVLSNMA
Trigger: GGCCATATTACTGAGGACAGCCAGTGATCTTACGCATTTCCACGTGGTGGGTGCCAACATTGTGAAGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp GTCCGAAGCGTGTTGGGTAAATGGTCCATGAGGACATaGAGATCCTTGGTTCTTGCAAATGGAATGAGCTGG +
Preference number: 6 (lower is better)
Translates to: VRSVLGKWSMRT*RSLVLANGMSW
Trigger: CCAGCTCATTCCATTTGCAAGAACCAAGGATCTGCATGTCCTCATGGACCATTTACCCAACACGCTTCGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp AGAAGGTCAGCTACTACCATTGGCTGTGGCAAAATGTaGCTCTTGAGCCAGTCAAGGAGTCTTGTGACCTCT +
Preference number: 6 (lower is better)
Translates to: RRSATTIGCGKM*LLSQSRSLVTS
Trigger: AGAGGTCACAAGACTCCTTGACTGGCTCAAGAGCCACATTTTGCCACAGCCAATGGTAGTAGCTGACCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp AGCCAAGTGGACTTCACTCTTGGGAGAAAGGAAAATGTGACTTCCTaGAAGTATTTGGTCAGCAGGTCCGGGCACACCTTCAGAATGCTC +
Preference number: 6 (lower is better)
Translates to: SQVDFTLGRKENVTS*KYLVSRSGHTFRML
Trigger: GAGCATTCTGAAGGTGTGCCCGGACCTGCTGACCAAATACTTCAAGGAAGTCACATTTTCCTTTCTCCCAAGAGTGAAGTCCACTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp CCTGGCAGTTTGTCCATGTTCAAGTTCTCGTGTGACAGCAGGAACTaGCTGATCTTCCAGTACATGTGCTCCTCTGGTTTCAAGATCTGC +
Preference number: 6 (lower is better)
Translates to: PGSLSMFKFSCDSRN*LIFQYMCSSGFKIC
Trigger: GCAGATCTTGAAACCAGAGGAGCACATGTACTGGAAGATCAGCAAGTTCCTGCTGTCACACGAGAACTTGAACATGGACAAACTGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp GAAGCCTGGCAGTTTGTCCATGTTCAAGTTCTCGTGTaGCAGCAGGAACTTGCTGATCTTCCAGTACATGTG +
Preference number: 6 (lower is better)
Translates to: EAWQFVHVQVLV*QQELADLPVHV
Trigger: CACATGTACTGGAAGATCAGCAAGTTCCTGCTGTCACACGAGAACTTGAACATGGACAAACTGCCAGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp CAACACTGCAGTCATATATGCCATGATGCTTTCCCCTaGTTCACAGTCTGTCCCAAGGAGCAGCTTATTCCT +
Preference number: 6 (lower is better)
Translates to: QHCSHICHDAFP*FTVCPKEQLIP
Trigger: AGGAATAAGCTGCTCCTTGGGACAGACTGTGAAGCAGGGGAAAGCATCATGGCATATATGACTGCAGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp TACAGCAGCTTCTTCACAATGTTGGCACCCACCACGTaGAAATGCGTAAGATCACTGGCTGTCCTCAGTAAT +
Preference number: 6 (lower is better)
Translates to: YSSFFTMLAPTT*KCVRSLAVLSN
Trigger: ATTACTGAGGACAGCCAGTGATCTTACGCATTTCCACGTGGTGGGTGCCAACATTGTGAAGAAGCTGCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp TCAGATGACAACATGGTTGGCAAAAACAGAGAGTGCTaGGTGAGCATCATGTGGACCACTGAAAGCTGGACA +
Preference number: 6 (lower is better)
Translates to: SDDNMVGKNREC*VSIMWTTESWT
Trigger: TGTCCAGCTTTCAGTGGTCCACATGATGCTCACCCAGCACTCTCTGTTTTTGCCAACCATGTTGTCATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp GGCCTGCTCTTATCCTTGAGCATTTTCATTAGGTCCTaGGCTTGGTGCTGCTCAATGACTGCTTTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: GLLLSLSIFIRS*AWCCSMTAFSS
Trigger: AGAGCTGAAAGCAGTCATTGAGCAGCACCAAGCCAAGGACCTAATGAAAATGCTCAAGGATAAGAGCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp ACATACAGAGACACCAGGAACGCTGCAGGAGCTCGTTaGGCTTCTTCCTTTTCATTCAGAGAATCAAGGCAC +
Preference number: 6 (lower is better)
Translates to: TYRDTRNAAGAR*ASSFSFRESRH
Trigger: GTGCCTTGATTCTCTGAATGAAAAGGAAGAAGCCAAACGAGCTCCTGCAGCGTTCCTGGTGTCTCTGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp GACTTCACTCTTGGGAGAAAGGAAAATGTGACTTCCTTGAAGTATTaGGTCAGCAGGTCCGGGCACACCTTCAGAATGCTCACCACAAGT +
Preference number: 6 (lower is better)
Translates to: DFTLGRKENVTSLKY*VSRSGHTFRMLTTS
Trigger: ACTTGTGGTGAGCATTCTGAAGGTGTGCCCGGACCTGCTGACCAAATACTTCAAGGAAGTCACATTTTCCTTTCTCCCAAGAGTGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp TCTCTTTCAATGAGGCTCCACTTGTGTAAGAGGATCAGGACATCTTaGGTAGAAAGTGCCACCTTGTTCACAGTGAATCGGCCCATGTCC +
Preference number: 6 (lower is better)
Translates to: SLSMRLHLCKRIRTS*VESATLFTVNRPMS
Trigger: GGACATGGGCCGATTCACTGTGAACAAGGTGGCACTTTCTACCAAAGATGTCCTGATCCTCTTACACAAGTGGAGCCTCATTGAAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 90 bp TTCAGCTCTCCTTGGAGCTTCGTGTCTCTTTCAATGAGGCTCCACTaGTGTAAGAGGATCAGGACATCTTTGGTAGAAAGTGCCACCTTG +
Preference number: 6 (lower is better)
Translates to: FSSPWSFVSLSMRLH*CKRIRTSLVESATL
Trigger: CAAGGTGGCACTTTCTACCAAAGATGTCCTGATCCTCTTACACAAGTGGAGCCTCATTGAAAGAGACACGAAGCTCCAAGGAGAGCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp TCACTGGCTGTCCTCAGTAATATGGCCTCGAAAGCTTaGAATATTAACAGCATTTCACTCTCGGGCCGCTTC +
Preference number: 6 (lower is better)
Translates to: SLAVLSNMASKA*NINSISLSGRF
Trigger: GAAGCGGCCCGAGAGTGAAATGCTGTTAATATTTCAAGCTTTCGAGGCCATATTACTGAGGACAGCCAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp CCATGTTCAAGTTCTCGTGTGACAGCAGGAACTTGCTaGTCTTCCAGTACATGTGCTCCTCTGGTTTCAAGA +
Preference number: 6 (lower is better)
Translates to: PCSSSRVTAGTC*SSSTCAPLVSR
Trigger: TCTTGAAACCAGAGGAGCACATGTACTGGAAGATCAGCAAGTTCCTGCTGTCACACGAGAACTTGAACATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp CTTTCAGCTCTCCTTGGAGCTTCGTGTCTCTTTCAATaGGGCTCCACTTGTGTAAGAGGATCAGGACATCTT +
Preference number: 6 (lower is better)
Translates to: LSALLGASCLFQ*GSTCVRGSGHL
Trigger: AAGATGTCCTGATCCTCTTACACAAGTGGAGCCTCATTGAAAGAGACACGAAGCTCCAAGGAGAGCTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp TTATCCTTGAGCATTTTCATTAGGTCCTTGGCTTGGTaGTGCTCAATGACTGCTTTCAGCTCTCCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: LSLSIFIRSLAW*CSMTAFSSPWS
Trigger: GCTCCAAGGAGAGCTGAAAGCAGTCATTGAGCAGCACCAAGCCAAGGACCTAATGAAAATGCTCAAGGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CCA 72 bp GTGGCACTGAGCAGAGTCTTCAAAAAGGTGAGGTCATaGTACCGAAATTTGAGTCCTGTCTTCACAAACTGC +
Preference number: 6 (lower is better)
Translates to: VALSRVFKKVRS*YRNLSPVFTNC
Trigger: GCAGTTTGTGAAGACAGGACTCAAATTTCGGTACCATGACCTCACCTTTTTGAAGACTCTGCTCAGTGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp GTTTTCAAACTCAACAAGAAGTGCAAGAGTGTCAGGTaGCCTCCTCTGCCAGAAGTTCCCAAAGAGGCATCA +
Preference number: 6 (lower is better)
Translates to: VFKLNKKCKSVR*PPLPEVPKEAS
Trigger: TGATGCCTCTTTGGGAACTTCTGGCAGAGGAGGCAACCTGACACTCTTGCACTTCTTGTTGAGTTTGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp TTGTCCATGTTCAAGTTCTCGTGTGACAGCAGGAACTaGCTGATCTTCCAGTACATGTGCTCCTCTGGTTTC +
Preference number: 6 (lower is better)
Translates to: LSMFKFSCDSRN*LIFQYMCSSGF
Trigger: GAAACCAGAGGAGCACATGTACTGGAAGATCAGCAAGTTCCTGCTGTCACACGAGAACTTGAACATGGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp ATGAGGCTCCACTTGTGTAAGAGGATCAGGACATCTTaGGTAGAAAGTGCCACCTTGTTCACAGTGAATCGG +
Preference number: 6 (lower is better)
Translates to: MRLHLCKRIRTS*VESATLFTVNR
Trigger: CCGATTCACTGTGAACAAGGTGGCACTTTCTACCAAAGATGTCCTGATCCTCTTACACAAGTGGAGCCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp GGAGCTGGAAAATCTCTGCACATTCCATGGAAATCTTaGTGTAGCCCTCGACAACATCACACATGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: GAGKSLHIPWKS*CSPRQHHTCLP
Trigger: AGGAAGACATGTGTGATGTTGTCGAGGGCTACATCAAGATTTCCATGGAATGTGCAGAGATTTTCCAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp AGGGTGTGTAACAAGGAGATCACGTTGGACAGCAGCTaGGTCTCTACAAATCTGCTCTCAAGGATGTGTAAA +
Preference number: 6 (lower is better)
Translates to: RVCNKEITLDSS*VSTNLLSRMCK
Trigger: TTTACACATCCTTGAGAGCAGATTTGTAGAGACTCAGCTGCTGTCCAACGTGATCTCCTTGTTACACACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp TTTTCAAACTCAACAAGAAGTGCAAGAGTGTCAGGTTaGCTCCTCTGCCAGAAGTTCCCAAAGAGGCATCAT +
Preference number: 6 (lower is better)
Translates to: FSNSTRSARVSG*LLCQKFPKRHH
Trigger: ATGATGCCTCTTTGGGAACTTCTGGCAGAGGAGGCAACCTGACACTCTTGCACTTCTTGTTGAGTTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp AGATCACGTTGGACAGCAGCTGAGTCTCTACAAATCTaGTCTCAAGGATGTGTAAAACCCACGTTAAAAGGC +
Preference number: 6 (lower is better)
Translates to: RSRWTAAESLQI*SQGCVKPTLKG
Trigger: GCCTTTTAACGTGGGTTTTACACATCCTTGAGAGCAGATTTGTAGAGACTCAGCTGCTGTCCAACGTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS CAA 72 bp CCTTGGAGCTTCGTGTCTCTTTCAATGAGGCTCCACTaGTGTAAGAGGATCAGGACATCTTTGGTAGAAAGT +
Preference number: 6 (lower is better)
Translates to: PWSFVSLSMRLH*CKRIRTSLVES
Trigger: ACTTTCTACCAAAGATGTCCTGATCCTCTTACACAAGTGGAGCCTCATTGAAAGAGACACGAAGCTCCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp AACAAATTCTTCCATCATCTCAGCTGTGTACACGTCTaGATCTTGCCATGTCTCTTTGTCCAGACAGTGGTC +
Preference number: 6 (lower is better)
Translates to: NKFFHHLSCVHV*ILPCLFVQTVV
Trigger: GACCACTGTCTGGACAAAGAGACATGGCAAGATTCAGACGTGTACACAGCTGAGATGATGGAAGAATTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp AGAACTGATTTCAGAAGAATTGTTTCTGCAACATCATaGTGGGCAGCTTTAGAGACAGCAGGAGTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: RTDFRRIVSATS*WAALETAGVLL
Trigger: CAGCAAGACTCCTGCTGTCTCTAAAGCTGCCCAGCATGATGTTGCAGAAACAATTCTTCTGAAATCAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS TCA 72 bp GAGTGTTTTACAGGTATGCTGTCCAAATTTAATGCCTaGGTGAACATGATCTTATTGCACACCAGAGGCACT +
Preference number: 6 (lower is better)
Translates to: ECFTGMLSKFNA*VNMILLHTRGT
Trigger: AGTGCCTCTGGTGTGCAATAAGATCATGTTCACTCAGGCATTAAATTTGGACAGCATACCTGTAAAACACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2
CDS GCA 72 bp TCATGGTCCTCCTTAATCTCTTGCTTTTTAAATGACTaGCAAACCCAAATAACAGTGTTCAGATCTGGCAAA +
Preference number: 6 (lower is better)
Translates to: SWSSLISCFLND*QTQITVFRSGK
Trigger: TTTGCCAGATCTGAACACTGTTATTTGGGTTTGGCAGTCATTTAAAAAGCAAGAGATTAAGGAGGACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140920.2