Pregenerated sensors for UQCRC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030884Ensembl transcript IDs: ENSMUST00000033176.7, ENSMUST00000208400.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGGACCTGACTTTGATGTaGTTGCTGGTCTGGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: KNARRTFTHNALLTLGQLDLTLM*LLVWAE Trigger: CTCAGCCCAGACCAGCAAGCACATCAAAGTCAGGTC...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| 3UTR-3UTR CAA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGCTGACTTTGATGTGCTaGCTGGTCTGGGCTGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: KNARRTFTHNALLTLGQLLTLMC*LVWAEL Trigger: AAGCTCAGCCCAGACCAGCAAGCACATCAAAGTCAG...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGCCTTTGGCAACACTCTaGCTCAGGAGGCTGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLPLATL*LRRLVV Trigger: CACCACCAGCCTCCTGAGCCAGAGTGTTGCCAAAGG...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR GCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGACGGCGAAACTCGGGTaGTGTGGTGACATTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLTAKLG*CGDIEQ Trigger: CTGCTCAATGTCACCACAGCACCCGAGTTTCGCCGT...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR TCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGGGCCACCCCTCATGTTaGGAAATTGTTCAGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLGHPSC*EIVQPP Trigger: AGGTGGCTGAACAATTTCTCAACATGAGGGGTGGCC...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGGCTGGTGACTTCCTTTaGCAACACTCTGGCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLAGDFL*QHSGSG Trigger: TCCTGAGCCAGAGTGTTGCCAAAGGAAGTCACCAGC...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR TCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGTTGTCAATCTTTAGCTaGGACCGCAGGGCAGCTACT | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLLSIFS*DRRAAT Trigger: AGTAGCTGCCCTGCGGTCTCAGCTAAAGATTGACAA...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR GCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGAACCTCTCCAGCAGCTaGAGCCTGGGAAATAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLNLSSS*SLGNSV Trigger: TACACTATTTCCCAGGCTGCAGCTGCTGGAGAGGTT...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR TCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGTCCCACGGGTTATCTTaGAAGATGAAGCTCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLSHGLS*KMKLLW Trigger: CCAAAGGAGCTTCATCTTTCAAGATAACCCGTGGGA...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR TCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGCGGGTCTGTGAATTCTaGAAGGCAACAGCTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLRVCEF*KATALS Trigger: TGACAAAGCTGTTGCCTTTCAGAATTCACAGACCCG...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR TCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGTGTTGTTGCCCCTTTTaGTATGTGGTCCAGCACCAA | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLCCCPF*YVVQHQ Trigger: TTGGTGCTGGACCACATATCAAAAGGGGCAACAACA...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR TCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGCTGGAAAGGTTTCCTTaGGCAACTGCTTTGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLLERFP*ATALTW Trigger: CCAAGTCAAAGCAGTTGCTCAAGGAAACCTTTCCAG...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR TCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGTCCACTCGCTGCCATTaGCTTCTTGCCAGAAACAAA | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLSTRCH*LLARNK Trigger: TTTGTTTCTGGCAAGAAGTCAATGGCAGCGAGTGGA...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGCACCTCCACGGTATTTaGCTTTTGCACCAGCTAAAC | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLHLHGI*LLHQLN Trigger: GTTTAGCTGGTGCAAAAGCCAAATACCGTGGAGGTG...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGGCAACAATAGCAGCATaGACCAGGTTGTCTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLATIAA*TRLSPF Trigger: GAATGGAGACAACCTGGTCCATGCTGCTATTGTTGC...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGTTGTTCTTGGCAGCTTaGACATCTGCACTGGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLLFLAA*TSALER Trigger: CCTTTCCAGTGCAGATGTCCAAGCTGCCAAGAACAA...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGAAGGACGGTAGAAGGTaGCATATAAGAACCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLKDGRR*HIRTCS Trigger: GCTGCAGGTTCTTATATGCCACCTTCTACCGTCCTT...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR TCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGAATGATACGGGTCTGTaGATTCTGAAAGGCAACAGC | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLNDTGL*ILKGNS Trigger: GCTGTTGCCTTTCAGAATTCACAGACCCGTATCATT...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR TCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGTGCTTTAAGACAGAATaGCTCACACCAAGTCCAACC | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLCFKTE*LTPSPT Trigger: GGTTGGACTTGGTGTGAGTCATTCTGTCTTAAAGCA...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR TCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGGATGCTGAAGTACACTaGATGCATTTGCCTCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLDAEVH*MHLPLH Trigger: ATGCAGAGGCAAATGCATTCAGTGTACTTCAGCATC...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR TCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGAAAGAGCCCAGAGTCTaGGTAACTGGCATTAAATGC | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLKEPRV*VTGIKC Trigger: GCATTTAATGCCAGTTACTCAGACTCTGGGCTCTTT...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR GCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGAACCAGAGCCATTCTTaGACTTGTGAAGTGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLNQSHS*TCEVVL Trigger: CAGAACCACTTCACAAGTGCAAGAATGGCTCTGGTT...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR GCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGGAATGCATTTGCCTCTaGATTTCCAATGGCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLECICL*ISNGST Trigger: AGTGCTGCCATTGGAAATGCAGAGGCAAATGCATTC...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR GCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGGTTTCCTTGAGCAACTaGTTTGACTTGGTTGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLVSLSN*FDLVVG Trigger: GCCTACAACCAAGTCAAAGCAGTTGCTCAAGGAAAC...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGCTTTTAGCTTGTTCTTaGCAGCTTGGACATCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLLLACS*QLGHLH Trigger: GTGCAGATGTCCAAGCTGCCAAGAACAAGCTAAAAG...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR GCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGAGGTTGTCTCCATTCTaGTCTCTAATTTCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLRLSPF*SLISPP Trigger: TGGAGGTGAAATTAGAGAGCAGAATGGAGACAACCT...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR GCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGTACACTGAATGCATTTaGCTCTGCATTTCCAATGGC | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLYTECI*LCISNG Trigger: GCCATTGGAAATGCAGAGGCAAATGCATTCAGTGTA...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR TCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGGGTTATCTTGAAAGATaGAGCTCCTTTGGTAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLGYLER*SSFGSQ Trigger: TTGACTACCAAAGGAGCTTCATCTTTCAAGATAACC...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| 3UTR CAA 72 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATaGACACTAGGACAGCTGGGAGTCACTATGCTTTTA | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNAL*TLGQLGVTMLL Trigger: TAAAAGCATAGTGACTCCCAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR GCA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGGTAACTGGCATTAAATaGAGAAACATCAAAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KNARRTFTHNALLTLGQLVTGIK*RNIKRL Trigger: CAGCCTTTTGATGTTTCTGCATTTAATGCCAGTTAC...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS CCA 90 bp | ACTCTGGCTCAGGAGGCTGGTGGTGTTGTTGCCCCTTTTGATATGTaGTCCAGCACCAAGAAGATGCTGAAGTACACTGAATGCATTTGC | + |
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Preference number: 5 (lower is better) Translates to: TLAQEAGGVVAPFDM*SSTKKMLKYTECIC Trigger: GCAAATGCATTCAGTGTACTTCAGCATCTTCTTGGTGCTGGACCACATATCAAAAGGGGCAACAACACCACCAGCCTCCTGAGCCAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS TCA 90 bp | GTGTTGTTGCCCCTTTTGATATGTGGTCCAGCACCAAGAAGATGCTaGAGTACACTGAATGCATTTGCCTCTGCATTTCCAATGGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: VLLPLLICGPAPRRC*STLNAFASAFPMAA Trigger: TGCTGCCATTGGAAATGCAGAGGCAAATGCATTCAGTGTACTTCAGCATCTTCTTGGTGCTGGACCACATATCAAAAGGGGCAACAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CAA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGAGGCCACCCCTCATGTaGAGAAATTGTTCAGCCACC | + |
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Preference number: 5 (lower is better) Translates to: KNARRTFTHNALLTLGQLRPPLM*RNCSAT Trigger: GGTGGCTGAACAATTTCTCAACATGAGGGGTGGCCT...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CAA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGGCAGCATGGACCAGGTaGTCTCCATTCTGCTCTCTA | + |
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Preference number: 5 (lower is better) Translates to: KNARRTFTHNALLTLGQLAAWTR*SPFCSL Trigger: TAGAGAGCAGAATGGAGACAACCTGGTCCATGCTGC...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CAA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGCACGGAGTCAATCTGTaGAAGGACGGTAGAAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: KNARRTFTHNALLTLGQLHGVNL*KDGRRW Trigger: CCACCTTCTACCGTCCTTCAACAGATTGACTCCGTG...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CAA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGCACGGTATTTGGCTTTaGCACCAGCTAAACCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: KNARRTFTHNALLTLGQLHGIWL*HQLNQG Trigger: GCCTTGGTTTAGCTGGTGCAAAAGCCAAATACCGTG...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CAA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGAGGCTGGTGGTGTTGTaGCCCCTTTTGATATGTGGT | + |
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Preference number: 5 (lower is better) Translates to: KNARRTFTHNALLTLGQLRLVVL*PLLICG Trigger: ACCACATATCAAAAGGGGCAACAACACCACCAGCCT...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CAA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGAGGAGGCTGGTGGTGTaGTTGCCCCTTTTGATATGT | + |
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Preference number: 5 (lower is better) Translates to: KNARRTFTHNALLTLGQLRRLVV*LPLLIC Trigger: ACATATCAAAAGGGGCAACAACACCACCAGCCTCCT...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CAA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGTCACCTCCACGGTATTaGGCTTTTGCACCAGCTAAA | + |
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Preference number: 5 (lower is better) Translates to: KNARRTFTHNALLTLGQLSPPRY*AFAPAK Trigger: TTTAGCTGGTGCAAAAGCCAAATACCGTGGAGGTGA...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CAA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGGCTTTTAGCTTGTTCTaGGCAGCTTGGACATCTGCA | + |
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Preference number: 5 (lower is better) Translates to: KNARRTFTHNALLTLGQLAFSLF*AAWTSA Trigger: TGCAGATGTCCAAGCTGCCAAGAACAAGCTAAAAGC...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CAA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGTTCCACTCGCTGCCATaGACTTCTTGCCAGAAACAA | + |
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Preference number: 5 (lower is better) Translates to: KNARRTFTHNALLTLGQLFHSLP*TSCQKQ Trigger: TTGTTTCTGGCAAGAAGTCAATGGCAGCGAGTGGAA...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CAA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGAGCAACTGCTTTGACTaGGTTGTAGGCAGCATTGAT | + |
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Preference number: 5 (lower is better) Translates to: KNARRTFTHNALLTLGQLSNCFD*VVGSID Trigger: ATCAATGCTGCCTACAACCAAGTCAAAGCAGTTGCT...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CAA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGACTGGAAAGGTTTCCTaGAGCAACTGCTTTGACTTG | + |
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Preference number: 5 (lower is better) Translates to: KNARRTFTHNALLTLGQLTGKVS*SNCFDL Trigger: CAAGTCAAAGCAGTTGCTCAAGGAAACCTTTCCAGT...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CAA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGAAAGATGAAGCTCCTTaGGTAGTCAAACTAGATGCA | + |
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Preference number: 5 (lower is better) Translates to: KNARRTFTHNALLTLGQLKDEAP*VVKLDA Trigger: TGCATCTAGTTTGACTACCAAAGGAGCTTCATCTTT...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS-3UTR CAA 90 bp | AAGAATGCAAGAAGAACATTTACACACAATGCTTTATTGACACTAGGACAGCTGCAGAAACAAACTTTTTaGCAGCCTTTACAACATCAG | + |
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Preference number: 5 (lower is better) Translates to: KNARRTFTHNALLTLGQLQKQTF*QPLQHQ Trigger: CTGATGTTGTAAAGGCTGCAAAAAAGTTTGTTTCTG...CAGCTGTCCTAGTGTCAATAAAGCATTGTGTGTAAATGTTCTTCTTGCATTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS CCA 72 bp | CAGGAGGCTGGTGGTGTTGTTGCCCCTTTTGATATGTaGTCCAGCACCAAGAAGATGCTGAAGTACACTGAA | + |
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Preference number: 6 (lower is better) Translates to: QEAGGVVAPFDM*SSTKKMLKYTE Trigger: TTCAGTGTACTTCAGCATCTTCTTGGTGCTGGACCACATATCAAAAGGGGCAACAACACCACCAGCCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS TCA 72 bp | ACCAACTGCTTCAATCCCACGGGTTATCTTGAAAGATaGAGCTCCTTTGGTAGTCTCAAGATCCTGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TNCFNPTGYLER*SSFGSLKILRL Trigger: CAGCCTCAGGATCTTGAGACTACCAAAGGAGCTTCATCTTTCAAGATAACCCGTGGGATTGAAGCAGTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208400.2 |
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| CDS CAA 72 bp | CTTTACAACATCAGCATCAGCCACGGAGTCAATCTGTaGAAGGACGGTAGAAGGTGGCATATAAGAACCTGC | + |
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Preference number: 6 (lower is better) Translates to: LYNISISHGVNL*KDGRRWHIRTC Trigger: GCAGGTTCTTATATGCCACCTTCTACCGTCCTTCAACAGATTGACTCCGTGGCTGATGCTGATGTTGTAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS GCA 72 bp | TTGGACATCTGCACTGGAAAGGTTTCCTTGAGCAACTaGTTTGACTTGGTTGTAGGCAGCATTGATAACCTC | + |
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Preference number: 6 (lower is better) Translates to: LDICTGKVSLSN*FDLVVGSIDNL Trigger: GAGGTTATCAATGCTGCCTACAACCAAGTCAAAGCAGTTGCTCAAGGAAACCTTTCCAGTGCAGATGTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033176.7 |
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| CDS TCA 72 bp | AGGCATTCTTGTAGGCAACATCATGCAAGTTCTCAATaGTACGGGTCTGTGAATTCTGAAAGGCAACAGCTT | + |
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Preference number: 6 (lower is better) Translates to: RHSCRQHHASSQ*YGSVNSERQQL Trigger: AAGCTGTTGCCTTTCAGAATTCACAGACCCGTATCATTGAGAACTTGCATGATGTTGCCTACAAGAATGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033176.7 ENSMUST00000208400.2 |
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