Pregenerated sensors for UQCRC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025651Ensembl transcript IDs: ENSMUST00000026743.14, ENSMUST00000192305.2, ENSMUST00000194047.3, ENSMUST00000194469.2, ENSMUST00000195738.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACATGGTAACAGGCATGATGGTGCACACCCCTAATCCCAGCTTTTaGCAGGTCCTTGGACAGTGCCTTGATGAGGTAAGCAGTGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: DMVTGMMVHTPNPSF*QVLGQCLDEVSSVL Trigger: GAGCACACTGCTTACCTCATCAAGGCACTGTCCAAGGACCTGCCAAAAGCTGGGATTAGGGGTGTGCACCATCATGCCTGTTACCATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195738.2 |
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| 3UTR GCA 90 bp | CAACAGACAGTTAGACAACCCAAAGGCACGTGGCTGATGGGGACATaGACACTTCACAAGCTCATCCAGCTCTCACCTGACGTTCTCACT | + |
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Preference number: 1 (lower is better) Translates to: QQTVRQPKGTWLMGT*TLHKLIQLSPDVLT Trigger: AGTGAGAACGTCAGGTGAGAGCTGGATGAGCTTGTGAAGTGTGCATGTCCCCATCAGCCACGTGCCTTTGGGTTGTCTAACTGTCTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192305.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTCCGGCCCCGCCCTCCTaGCTGCCTGTGCAGACTTCC | + |
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Preference number: 2 (lower is better) Translates to: ALLGVTGCTQLSSRSGMSPAPPS*LPVQTS Trigger: GGAAGTCTGCACAGGCAGGCAGGAGGGCGGGGCCGG...AGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| 3UTR-3UTR GCA 90 bp | ACCCAAAGGCACGTGGCTGATGGGGACATGCACACTTCACAAGCTCATCCAGCTCCTGGGCTAGAGGTGTaGCCTGGAATGCTGTCGCAT | + |
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Preference number: 2 (lower is better) Translates to: TQRHVADGDMHTSQAHPAPGLEV*PGMLSH Trigger: ATGCGACAGCATTCCAGGGCACACCTCTAGCCCAGG...AGCTGGATGAGCTTGTGAAGTGTGCATGTCCCCATCAGCCACGTGCCTTTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192305.2 |
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| 3UTR GCA 72 bp | CAGCAGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTaGCCGGCCCCGCCCTCCTGCCTGCCTGTGCAGACT | + |
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Preference number: 3 (lower is better) Translates to: QQEWYVCGRDPG*PAPPSCLPVQT Trigger: AGTCTGCACAGGCAGGCAGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCTGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| 3UTR GCA 72 bp | GTTAGACAACCCAAAGGCACGTGGCTGATGGGGACATaGACACTTCACAAGCTCATCCAGCTCTCACCTGAC | + |
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Preference number: 3 (lower is better) Translates to: VRQPKGTWLMGT*TLHKLIQLSPD Trigger: GTCAGGTGAGAGCTGGATGAGCTTGTGAAGTGTGCATGTCCCCATCAGCCACGTGCCTTTGGGTTGTCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192305.2 |
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| CDS-3UTR GCA 90 bp | AGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTGCCGTAGCATGCGAGGACTaGTCCGAGGCCACACGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RSGMSVAGTPGARPRPPAVACED*SEATRS Trigger: GCTGCGTGTGGCCTCGGAGCAGTCCTCGCATGCTAC...GGCAGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | AGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTGCCACCGTGCAGGTAGCATaGGAGGACTGCTCCGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RSGMSVAGTPGARPRPPATVQVA*EDCSEA Trigger: GGCCTCGGAGCAGTCCTCGCATGCTACCTGCACGGT...GGCAGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR TCA 90 bp | AGCAGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTCGTTGTCCAAGATGCTaGCCTGGGTCTCCGGCACGC | + |
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Preference number: 4 (lower is better) Translates to: SRSGMSVAGTPGARPRPPRCPRC*PGSPAR Trigger: GCGTGCCGGAGACCCAGGTCAGCATCTTGGACAACG...AGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CCA 90 bp | AGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTGCCTCCAAGATGCTGACCTaGGTCTCCGGCACGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RSGMSVAGTPGARPRPPASKMLT*VSGTLW Trigger: CCAGAGCGTGCCGGAGACCCAGGTCAGCATCTTGGA...GGCAGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CCA 90 bp | AGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTGCCACTGCAATGGCCACGTaGGCCAAAGGCAGGGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: RSGMSVAGTPGARPRPPATAMAT*AKGRAS Trigger: TGACGCCCTGCCTTTGGCCCACGTGGCCATTGCAGT...GGCAGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CCA 90 bp | AGCAGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTCTGGGAGCTGCTCGATaGGGCCATAGCCAGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: SRSGMSVAGTPGARPRPPLGAAR*GHSQPL Trigger: CAGTGGCTGGCTATGGCCCCATCGAGCAGCTCCCAG...AGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CCA 90 bp | AGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTGCCGTCCCTCTACTGCAATaGCCACGTGGGCCAAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: RSGMSVAGTPGARPRPPAVPLLQ*PRGPKA Trigger: TGCCTTTGGCCCACGTGGCCATTGCAGTAGAGGGAC...GGCAGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | AGCAGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTAGCGCAGCCAGAACATaGCACTGCGGATCCGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: SRSGMSVAGTPGARPRPPSAART*HCGSGC Trigger: ACAACCGGATCCGCAGTGGCATGTTCTGGCTGCGCT...AGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CCA 90 bp | AGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTGCCCTGCTCAAGTGTTTCTaGGCAAGGTCCAGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RSGMSVAGTPGARPRPPALLKCF*ARSSSC Trigger: GCAGCTGCTGGACCTTGCCCAGAAACACTTGAGCAG...GGCAGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CCA 90 bp | AGCAGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTATGGCATTGGCCACTTaGAGGGTCACGTTGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SRSGMSVAGTPGARPRPPMALAT*RVTLSG Trigger: CCCAGACAACGTGACCCTCCAAGTGGCCAATGCCAT...AGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | AGCAGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTATCACAGACAAAGTGTaGGCCCAGCAGCCCAGTATC | + |
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Preference number: 4 (lower is better) Translates to: SRSGMSVAGTPGARPRPPITDKV*AQQPSI Trigger: GATACTGGGCTGCTGGGCGCACACTTTGTCTGTGAT...AGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CCA 90 bp | GGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGGCAGGACGCTCTGGAGGGCCTaGGCGAAGGTTGCGGTACCC | + |
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Preference number: 4 (lower is better) Translates to: GGNWLHTAEQQEWYVCGRTLWRA*AKVAVP Trigger: GGGTACCGCAACCTTCGCCCAGGCCCTCCAGAGCGT...CCTGCCACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR TCA 90 bp | AGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTGCCTTCCTTCTCGATCTGTaGGTCTTCCAGACTACTGTT | + |
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Preference number: 4 (lower is better) Translates to: RSGMSVAGTPGARPRPPAFLLDL*VFQTTV Trigger: AACAGTAGTCTGGAAGACTCACAGATCGAGAAGGAA...GGCAGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CCA 90 bp | GGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGGCAGGGGATCCGGTTGTAGTCTaGGAGCTGCTCGATGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GVTGCTQLSSRSGMSVAGDPVVV*ELLDGA Trigger: GGCCCCATCGAGCAGCTCCCAGACTACAACCGGATC...CCCTGCCACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR TCA 90 bp | GGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGGCAGGGACTGGGCATCCACCTCCTaGATCCGGCTCTCCCACTCA | + |
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Preference number: 4 (lower is better) Translates to: GNWLHTAEQQEWYVCGRDWASTS*IRLSHS Trigger: TGAGTGGGAGAGCCGGATTCAGGAGGTGGATGCCCA...GTCCCTGCCACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | GCTTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGGCCTGGGCGAAGGTTaGGGTACCCCGCAAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ALLGVTGCTQLSSRSGMSGLGEG*GTPQGR Trigger: CCTGCCTTGCGGGGTACCGCAACCTTCGCCCAGGCC...AGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | TTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGGCATTCCACACCTCCAGCTaGAGCCAGCACCATCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: LGVTGCTQLSSRSGMSVAFHTSS*SQHHPG Trigger: CCCCGGATGGTGCTGGCTGCAGCTGGAGGTGTGGAA...TGCCACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CCA 90 bp | GGCTTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCGTCTCCGGCACGCTCTaGAGGGCCTGGGCGAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: GFIGGNWLHTAEQQEWYVVSGTL*RAWAKV Trigger: AACCTTCGCCCAGGCCCTCCAGAGCGTGCCGGAGAC...GACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CCA 90 bp | GGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGGCAGGGAGGTCCAGCAGCTGCTaGTGTTCCACACCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GVTGCTQLSSRSGMSVAGRSSSC*CSTPPA Trigger: AGCTGGAGGTGTGGAACACCAGCAGCTGCTGGACCT...CCCTGCCACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | GGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGGCAGGGACCCTGGGCTAGAGGTGTaGCCTGGAATGCTGTCGCAT | + |
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Preference number: 4 (lower is better) Translates to: GNWLHTAEQQEWYVCGRDPGLEV*PGMLSH Trigger: ATGCGACAGCATTCCAGGGCACACCTCTAGCCCAGG...GTCCCTGCCACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | TTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGGCAGCCAGGTCCCTCTACTaGAATGGCCACGTGGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LGVTGCTQLSSRSGMSVAARSLY*NGHVGQ Trigger: TTGGCCCACGTGGCCATTGCAGTAGAGGGACCTGGC...TGCCACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | GGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGGCAGGGACACTCGGGAGACACTaGTCAAGTGTTTCTGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: GVTGCTQLSSRSGMSVAGTLGRH*SSVSGQ Trigger: TTGCCCAGAAACACTTGAGCAGTGTCTCCCGAGTGT...CCCTGCCACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | GGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGGCAGGCCTTCTCTAAGGCATTaGCAGGCCGATTCTTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: GGNWLHTAEQQEWYVCGRPSLRH*QADSLF Trigger: GAACAAAGAATCGGCCTGGCAATGCCTTAGAGAAGG...CCTGCCACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | GGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGGCAGGGTTCTGCACGATATCTaGCAGGAGCTCCACAACTTT | + |
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Preference number: 4 (lower is better) Translates to: GGNWLHTAEQQEWYVCGRVLHDI*QELHNF Trigger: AAAGTTGTGGAGCTCCTGGCAGATATCGTGCAGAAC...CCTGCCACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | ATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGGCGAGGCGTCATTTTCCTaGATCTCCCGCAGGATCACA | + |
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Preference number: 4 (lower is better) Translates to: IGGNWLHTAEQQEWYVCGEASFS*ISRRIT Trigger: TGTGATCCTGCGGGAGATGCAGGAAAATGACGCCTC...GCCACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | ATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGGCCGCATCCACTGGCCTTaGAGGAAGAAGACCATGTCA | + |
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Preference number: 4 (lower is better) Translates to: IGGNWLHTAEQQEWYVCGRIHWP*RKKTMS Trigger: TGACATGGTCTTCTTCCTGCAAGGCCAGTGGATGCG...GCCACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CCA 90 bp | GCTTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGCTAGAGGTGTGCCCTaGAATGCTGTCGCATGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ALLGVTGCTQLSSRSGMSARGVP*NAVACR Trigger: CCTGCATGCGACAGCATTCCAGGGCACACCTCTAGC...AGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | TTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGCAAGGTCCAGCAGCTaGTGGTGTTCCACACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FIGGNWLHTAEQQEWYVCARSSS*WCSTPP Trigger: TGGAGGTGTGGAACACCAGCAGCTGCTGGACCTTGC...ACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR TCA 90 bp | AGGGCTTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGCAGAGTAGGAGATGTTaGAGGTCTGGAAACTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RALLGVTGCTQLSSRSGMQSRRC*RSGNSG Trigger: GCCAGAGTTTCCAGACCTTCAACATCTCCTACTCTG...CATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAAGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | GCTTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTCACACACAGGGGTGGTaGCATCCAAATGAGACACCA | + |
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Preference number: 4 (lower is better) Translates to: ALLGVTGCTQLSSRSGMSHTQGW*HPNETP Trigger: TGGTGTCTCATTTGGATGGCACCACCCCTGTGTGTG...AGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | TTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGCCAGAACATGCCACTaGGGATCCGGTTGTAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: FIGGNWLHTAEQQEWYVCARTCH*GSGCSL Trigger: CAGACTACAACCGGATCCGCAGTGGCATGTTCTGGC...ACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CCA 90 bp | GGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGGCAGGGACAAGGTCTGGAAACTCTaGCAAAGCTTGTTAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: GNWLHTAEQQEWYVCGRDKVWKL*QSLLAT Trigger: TGTGGCTAACAAGCTTTGCCAGAGTTTCCAGACCTT...GTCCCTGCCACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | TTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTAGGTGTGCCCTGGAATaGTGTCGCATGCAGGTAATC | + |
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Preference number: 4 (lower is better) Translates to: FIGGNWLHTAEQQEWYVCRCALE*CRMQVI Trigger: GATTACCTGCATGCGACAGCATTCCAGGGCACACCT...ACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR TCA 90 bp | ACCCAAAGGCACGTGGCTGATGGGGACATGCACACTTCACAAGCTCATCCAGCTTTCCTTCTCGATCTGTaGGTCTTCCAGACTACTGTT | + |
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Preference number: 4 (lower is better) Translates to: TQRHVADGDMHTSQAHPAFLLDL*VFQTTV Trigger: AACAGTAGTCTGGAAGACTCACAGATCGAGAAGGAA...AGCTGGATGAGCTTGTGAAGTGTGCATGTCCCCATCAGCCACGTGCCTTTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192305.2 |
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| CDS-3UTR TCA 90 bp | TTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTAGTCATAGTGGCCTATaGTGGCATTGGCCACTTGGA | + |
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Preference number: 4 (lower is better) Translates to: FIGGNWLHTAEQQEWYVCSHSGL*WHWPLG Trigger: TCCAAGTGGCCAATGCCATCATAGGCCACTATGACT...ACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CCA 90 bp | AGGGCTTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGATAGCCAGCCACTGCTaGACATTGGTCATAAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: RALLGVTGCTQLSSRSGMIASHC*TLVIKV Trigger: TACTTTTATGACCAATGTCCAGCAGTGGCTGGCTAT...CATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAAGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR TCA 90 bp | GGCTTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCGATTCTTTGTTCCCTTaGAAGCCAGATGTTCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: GFIGGNWLHTAEQQEWYVDSLFP*KPDVPK Trigger: TTTTGGAACATCTGGCTTTCAAGGGAACAAAGAATC...GACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR GCA 90 bp | ATGCAGGTAATCAAAGACCACGTTCTGCATGGAGGCGTCATTTTCCTGCATCTCGTTCTGCACGATATCTaGCAGGAGCTCCACAACTTG | + |
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Preference number: 4 (lower is better) Translates to: MQVIKDHVLHGGVIFLHLVLHDI*QELHNL Trigger: CAAGTTGTGGAGCTCCTGGCAGATATCGTGCAGAAC...GAGATGCAGGAAAATGACGCCTCCATGCAGAACGTGGTCTTTGATTACCTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192305.2 |
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| CDS-3UTR TCA 90 bp | GAGGTAAGCAGTGTGCTCTCGAGTGCTGTAGGCATTAAGATGAGCCCCAATACTGATTCTTTGTTCCCTTaGAAGCCAGATGTTCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: EVSSVLSSAVGIKMSPNTDSLFP*KPDVPK Trigger: TTTTGGAACATCTGGCTTTCAAGGGAACAAAGAATC...AGTATTGGGGCTCATCTTAATGCCTACAGCACTCGAGAGCACACTGCTTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195738.2 |
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| CDS TCA 90 bp | GCGAGGACTGCTCCGAGGCCACACGCAGCCCGTTGTCCAAGATGCTaGCCTGGGTCTCCGGCACGCTCTGGAGGGCCGAGCGGCGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARTAPRPHAARCPRC*PGSPARSGGPSGGC Trigger: GCACCCGCCGCTCGGCCCTCCAGAGCGTGCCGGAGACCCAGGTCAGCATCTTGGACAACGGGCTGCGTGTGGCCTCGGAGCAGTCCTCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194047.3 |
||
| CDS-3UTR CAA 90 bp | AGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTGCCCGGAAGCCAGCGGGCTaGACAGGTGCACTCCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSGMSVAGTPGARPRPPARKPAG*TGALHH Trigger: GTGGTGGAGTGCACCTGTCAAGCCCGCTGGCTTCCG...GGCAGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS CCA 90 bp | GACTGCTCCGAGGCCACACGCAGCCCGTTGTCCAAGATGCTGACCTaGGTCTCCGGCACGCTCTGGAGGGCCGAGCGGCGGGTGCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: DCSEATRSPLSKMLT*VSGTLWRAERRVRS Trigger: ACTTCGCACCCGCCGCTCGGCCCTCCAGAGCGTGCCGGAGACCCAGGTCAGCATCTTGGACAACGGGCTGCGTGTGGCCTCGGAGCAGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194047.3 |
||
| CDS TCA 90 bp | GCGAGGACTGCTCCGAGGCCACACGCAGCCCGTTGTCCAAGATGCTaGCCTGGGTCTCCGGCACGCTCTGGAGGGCCTGGGCGAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ARTAPRPHAARCPRC*PGSPARSGGPGRRL Trigger: CAACCTTCGCCCAGGCCCTCCAGAGCGTGCCGGAGACCCAGGTCAGCATCTTGGACAACGGGCTGCGTGTGGCCTCGGAGCAGTCCTCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
||
| CDS-3UTR CAA 90 bp | AGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTGCCGCGCATCCACTGGCCTaGCAGGAAGAAGACCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: RSGMSVAGTPGARPRPPAAHPLA*QEEDHV Trigger: GACATGGTCTTCTTCCTGCAAGGCCAGTGGATGCGC...GGCAGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
||
| CDS CCA 90 bp | CGCAGCCCGTTGTCCAAGATGCTGACCTGGGTCTCCGGCACGCTCTaGAGGGCCTGGGCGAAGGTTGCGGTACCCCGCAAGGCAGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: RSPLSKMLTWVSGTL*RAWAKVAVPRKAGN Trigger: GTTACCTGCCTTGCGGGGTACCGCAACCTTCGCCCAGGCCCTCCAGAGCGTGCCGGAGACCCAGGTCAGCATCTTGGACAACGGGCTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS CCA 90 bp | GACTGCTCCGAGGCCACACGCAGCCCGTTGTCCAAGATGCTGACCTaGGTCTCCGGCACGCTCTGGAGGGCCTGGGCGAAGGTTGCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: DCSEATRSPLSKMLT*VSGTLWRAWAKVAV Trigger: TACCGCAACCTTCGCCCAGGCCCTCCAGAGCGTGCCGGAGACCCAGGTCAGCATCTTGGACAACGGGCTGCGTGTGGCCTCGGAGCAGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS CCA 90 bp | TTGTCCAAGATGCTGACCTGGGTCTCCGGCACGCTCTGGAGGGCCTaGGCGAAGGTTGCGGTACCCCGCAAGGCAGGTAACCTCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSKMLTWVSGTLWRA*AKVAVPRKAGNLSR Trigger: CCTGCTGAGGTTACCTGCCTTGCGGGGTACCGCAACCTTCGCCCAGGCCCTCCAGAGCGTGCCGGAGACCCAGGTCAGCATCTTGGACAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
||
| CDS GCA 90 bp | CCAGCGTCAATCCACACTCCCACCGTGCAGGTAGCATGCGAGGACTaGTCCGAGGCCACACGCAGCCCGTTGTCCAAGATGCTGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PASIHTPTVQVACED*SEATRSPLSKMLTW Trigger: CCAGGTCAGCATCTTGGACAACGGGCTGCGTGTGGCCTCGGAGCAGTCCTCGCATGCTACCTGCACGGTGGGAGTGTGGATTGACGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026743.14 ENSMUST00000194047.3 |
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| CDS GCA 90 bp | TTGGAGGGTCACGTTGTCTGGGTTAGCCCAGCCAGGTCCCTCTACTaGAATGGCCACGTGGGCCAAAGGCAGGGCGTCATCGCGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LEGHVVWVSPARSLY*NGHVGQRQGVIAMA Trigger: CGCCATCGCGATGACGCCCTGCCTTTGGCCCACGTGGCCATTGCAGTAGAGGGACCTGGCTGGGCTAACCCAGACAACGTGACCCTCCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
||
| CDS CCA 90 bp | CTAGAAGCGCAGCCAGAACATGCCACTGCGGATCCGGTTGTAGTCTaGGAGCTGCTCGATGGGGCTCAGCCAGAGGGATGCGGCGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LEAQPEHATADPVVV*ELLDGAQPEGCGGH Trigger: ATGGCCGCCGCATCCCTCTGGCTGAGCCCCATCGAGCAGCTCCCAGACTACAACCGGATCCGCAGTGGCATGTTCTGGCTGCGCTTCTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194469.2 |
||
| CDS GCA 90 bp | ACTCGGGAGACACTGCTCAAGTGTTTCTGGGCAAGGTCCAGCAGCTaGTGGTGTTCCACACCTCCAGCTGCAGCCAGCACCATCCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TRETLLKCFWARSSS*WCSTPPAAASTIRG Trigger: CCCCCGGATGGTGCTGGCTGCAGCTGGAGGTGTGGAACACCAGCAGCTGCTGGACCTTGCCCAGAAACACTTGAGCAGTGTCTCCCGAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
||
| CDS GCA 90 bp | GCCTGTGCAGACTTCCTGCCTAGAAGCGCAGCCAGAACATGCCACTaGGGATCCGGTTGTAGTCTGGGAGCTGCTCGATGGGGCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ACADFLPRSAARTCH*GSGCSLGAARWGSA Trigger: GGCTGAGCCCCATCGAGCAGCTCCCAGACTACAACCGGATCCGCAGTGGCATGTTCTGGCTGCGCTTCTAGGCAGGAAGTCTGCACAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194469.2 |
||
| CDS GCA 90 bp | CTGCCTGCCTGTGCAGACTTCCTGCCTAGAAGCGCAGCCAGAACATaGCACTGCGGATCCGGTTGTAGTCTGGGAGCTGCTCGATGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPACADFLPRSAART*HCGSGCSLGAARWG Trigger: GCCCCATCGAGCAGCTCCCAGACTACAACCGGATCCGCAGTGGCATGTTCTGGCTGCGCTTCTAGGCAGGAAGTCTGCACAGGCAGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194469.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTTCCTTCTCTAAGGCATaGCCAGGCCGATTCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SRSGMSVAGTPGARPRPPSFSKA*PGRFFV Trigger: AACAAAGAATCGGCCTGGCAATGCCTTAGAGAAGGA...AGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
||
| CDS-3UTR CAA 90 bp | AGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTGCCAGCCACTGCTGGACATaGGTCATAAAAGTACTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSGMSVAGTPGARPRPPASHCWT*VIKVLG Trigger: TCCAAGTACTTTTATGACCAATGTCCAGCAGTGGCT...GGCAGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
||
| CDS-3UTR CAA 90 bp | CAGGAGTGGTATGTCTGTGGCAGGGACCCCGGGTGCCCGGCCCCGCCCTCCTGCCGATTCTTTGTTCCCTaGAAAGCCAGATGTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QEWYVCGRDPGCPAPPSCRFFVP*KARCSK Trigger: TTTGGAACATCTGGCTTTCAAGGGAACAAAGAATCG...GCAGGAGGGCGGGGCCGGGCACCCGGGGTCCCTGCCACAGACATACCACTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
||
| CDS GCA 90 bp | CCGGTTGTAGTCTGGGAGCTGCTCGATGGGGCTCAGCCAGAGGGATaGGGCGGCCATAAGTCAGGAGACTGCGACCAATGTCTTCACACA | + |
|
Preference number: 5 (lower is better) Translates to: PVVVWELLDGAQPEG*GGHKSGDCDQCLHT Trigger: TGTGTGAAGACATTGGTCGCAGTCTCCTGACTTATGGCCGCCGCATCCCTCTGGCTGAGCCCCATCGAGCAGCTCCCAGACTACAACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194469.2 |
||
| CDS CCA 90 bp | CTAGAAGCGCAGCCAGAACATGCCACTGCGGATCCGGTTGTAGTCTaGGAGCTGCTCGATGGGGCCATAGCCAGCCACTGCTGGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: LEAQPEHATADPVVV*ELLDGAIASHCWTL Trigger: CAATGTCCAGCAGTGGCTGGCTATGGCCCCATCGAGCAGCTCCCAGACTACAACCGGATCCGCAGTGGCATGTTCTGGCTGCGCTTCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
||
| CDS-3UTR CAA 90 bp | GGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGGCAGGGGATGGCATTGGCCACTaGGAGGGTCACGTTGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GVTGCTQLSSRSGMSVAGDGIGH*EGHVVW Trigger: CCAGACAACGTGACCCTCCAAGTGGCCAATGCCATC...CCCTGCCACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS GCA 90 bp | GATGGGGCTCAGCCAGAGGGATGCGGCGGCCATAAGTCAGGAGACTaGGACCAATGTCTTCACACACAGGGGTGGTGCCATCCAAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: DGAQPEGCGGHKSGD*DQCLHTQGWCHPNE Trigger: CTCATTTGGATGGCACCACCCCTGTGTGTGAAGACATTGGTCGCAGTCTCCTGACTTATGGCCGCCGCATCCCTCTGGCTGAGCCCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194469.2 |
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| CDS CCA 90 bp | CAGGGCGTCATCGCGATGGCGGATCTCACTGCCAGTGAAGCGACATaGAGTGAGACCAGGCACGGCATCTTCTTCATACACTCGGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QGVIAMADLTASEAT*SETRHGIFFIHSGD Trigger: GTCTCCCGAGTGTATGAAGAAGATGCCGTGCCTGGTCTCACTCCATGTCGCTTCACTGGCAGTGAGATCCGCCATCGCGATGACGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CAA 90 bp | AGGGCTTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGGCCACACGCAGCCCGTaGTCCAAGATGCTGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RALLGVTGCTQLSSRSGMATRSP*SKMLTW Trigger: CCAGGTCAGCATCTTGGACAACGGGCTGCGTGTGGC...CATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAAGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
||
| CDS GCA 90 bp | TCTCCCACTCAGCCAGAGGGATGCGGCGGCCATAAGTCAGGAGACTaGGACCAATGTCTTCACACACAGGGGTGGTGCCATCCAAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPTQPEGCGGHKSGD*DQCLHTQGWCHPNE Trigger: CTCATTTGGATGGCACCACCCCTGTGTGTGAAGACATTGGTCGCAGTCTCCTGACTTATGGCCGCCGCATCCCTCTGGCTGAGTGGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CAA 90 bp | AGGGCTTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTGGCCTATGATGGCATaGGCCACTTGGAGGGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: RALLGVTGCTQLSSRSGMWPMMA*ATWRVT Trigger: CGTGACCCTCCAAGTGGCCAATGCCATCATAGGCCA...CATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAAGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS TCA 90 bp | ACTCTGGCAAAGCTTGTTAGCCACAGCAACGGAAGCCAGCGGGCTTaGCAGGTGCACTCCACCACCGTAAGTGCAGTCATAGTGGCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: TLAKLVSHSNGSQRA*QVHSTTVSAVIVAY Trigger: ATAGGCCACTATGACTGCACTTACGGTGGTGGAGTGCACCTGTCAAGCCCGCTGGCTTCCGTTGCTGTGGCTAACAAGCTTTGCCAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026743.14 ENSMUST00000194469.2 |
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| CDS-3UTR CAA 90 bp | TTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTGTGGCAACTTTTGGCAGGTCCTaGGACAGTGCCTTGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGVTGCTQLSSRSGMSVATFGRS*DSALMR Trigger: CCTCATCAAGGCACTGTCCAAGGACCTGCCAAAAGT...TGCCACAGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS-3UTR CAA 90 bp | GGCTTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCGGAGCTCCACAACTTTaGGCAGGTCCTTGGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GFIGGNWLHTAEQQEWYVGAPQL*AGPWTV Trigger: CACTGTCCAAGGACCTGCCAAAAGTTGTGGAGCTCC...GACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS CCA 90 bp | TGGGGCCATAGCCAGCCACTGCTGGACATTGGTCATAAAAGTACTTaGAGCAAATGTCACGCAGCATCTGGGCATCCACCTCCTGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: WGHSQPLLDIGHKST*SKCHAASGHPPPES Trigger: GGATTCAGGAGGTGGATGCCCAGATGCTGCGTGACATTTGCTCCAAGTACTTTTATGACCAATGTCCAGCAGTGGCTGGCTATGGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS TCA 90 bp | TTCCTGCATCTCCCGCAGGATCACATCTCGTTCCTTCTCGATCTGTaGGTCTTCCAGACTACTGTTCTGCACGATATCTGCCAGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLHLPQDHISFLLDL*VFQTTVLHDICQEL Trigger: GAGCTCCTGGCAGATATCGTGCAGAACAGTAGTCTGGAAGACTCACAGATCGAGAAGGAACGAGATGTGATCCTGCGGGAGATGCAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026743.14 ENSMUST00000194047.3 |
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| CDS GCA 90 bp | GATATCTGCCAGGAGCTCCACAACTTTTGGCAGGTCCTTGGACAGTaGCTTGATGAGGTAAGCAGTGTGCTCTCGAGTGCTGTAGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: DICQELHNFWQVLGQ*LDEVSSVLSSAVGI Trigger: AATGCCTACAGCACTCGAGAGCACACTGCTTACCTCATCAAGGCACTGTCCAAGGACCTGCCAAAAGTTGTGGAGCTCCTGGCAGATATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026743.14 ENSMUST00000194047.3 |
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| CDS-3UTR CAA 90 bp | GCTTTATTGGGGGTAACTGGCTGCACACAGCTGAGCAGCAGGAGTGGTATGTCTAAACTCTGGCAAAGCTaGTTAGCCACAGCAACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ALLGVTGCTQLSSRSGMSKLWQS*LATATE Trigger: TTCCGTTGCTGTGGCTAACAAGCTTTGCCAGAGTTT...AGACATACCACTCCTGCTGCTCAGCTGTGTGCAGCCAGTTACCCCCAATAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS GCA 90 bp | ACATCTCGTTCCTTCTCGATCTGTGAGTCTTCCAGACTACTGTTCTaGACGATATCTGCCAGGAGCTCCACAACTTTTGGCAGGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TSRSFSICESSRLLF*TISARSSTTFGRSL Trigger: CAAGGACCTGCCAAAAGTTGTGGAGCTCCTGGCAGATATCGTGCAGAACAGTAGTCTGGAAGACTCACAGATCGAGAAGGAACGAGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026743.14 ENSMUST00000194047.3 |
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| CDS-3UTR CAA 90 bp | GAGCTCCACAACTGGACACACAAGGACATGGTAACAGGCATGATGGTGCACACCCGATTCTTTGTTCCCTaGAAAGCCAGATGTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ELHNWTHKDMVTGMMVHTRFFVP*KARCSK Trigger: TTTGGAACATCTGGCTTTCAAGGGAACAAAGAATCG...GGTGTGCACCATCATGCCTGTTACCATGTCCTTGTGTGTCCAGTTGTGGAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195738.2 |
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| CDS GCA 72 bp | AGCAGGGCCGGCGAGCGGCGGGTGCGAAGTAGCACTTaGGTCCCGGAGCAGGCCGCTCGGCAGACTGCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SRAGERRVRSST*VPEQAARQTAD Trigger: GTCCGCAGTCTGCCGAGCGGCCTGCTCCGGGACGCAAGTGCTACTTCGCACCCGCCGCTCGCCGGCCCTGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS GCA 72 bp | CTCTGGAGGGCCGAGCGGCGGGTGCGAAGTAGCACTTaGGTCCCGGAGCAGGCCGCTCGGCAGACTGCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LWRAERRVRSST*VPEQAARQTAD Trigger: GTCCGCAGTCTGCCGAGCGGCCTGCTCCGGGACGCAAGTGCTACTTCGCACCCGCCGCTCGGCCCTCCAGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194047.3 |
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| CDS CCA 72 bp | GAGGCCACACGCAGCCCGTTGTCCAAGATGCTGACCTaGGTCTCCGGCACGCTCTGGAGGGCCGAGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: EATRSPLSKMLT*VSGTLWRAERR Trigger: CCGCCGCTCGGCCCTCCAGAGCGTGCCGGAGACCCAGGTCAGCATCTTGGACAACGGGCTGCGTGTGGCCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194047.3 |
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| CDS TCA 72 bp | GCTCCGAGGCCACACGCAGCCCGTTGTCCAAGATGCTaGCCTGGGTCTCCGGCACGCTCTGGAGGGCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: APRPHAARCPRC*PGSPARSGGPG Trigger: CCCAGGCCCTCCAGAGCGTGCCGGAGACCCAGGTCAGCATCTTGGACAACGGGCTGCGTGTGGCCTCGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS TCA 72 bp | GCTCCGAGGCCACACGCAGCCCGTTGTCCAAGATGCTaGCCTGGGTCTCCGGCACGCTCTGGAGGGCCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: APRPHAARCPRC*PGSPARSGGPS Trigger: GCTCGGCCCTCCAGAGCGTGCCGGAGACCCAGGTCAGCATCTTGGACAACGGGCTGCGTGTGGCCTCGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194047.3 |
||
| CDS CAA 72 bp | GGGTCTCCGGCACGCTCTGGAGGGCCTGGGCGAAGGTaGCGGTACCCCGCAAGGCAGGTAACCTCAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSPARSGGPGRR*RYPARQVTSAG Trigger: CCCTGCTGAGGTTACCTGCCTTGCGGGGTACCGCAACCTTCGCCCAGGCCCTCCAGAGCGTGCCGGAGACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
||
| CDS CCA 72 bp | GAGGCCACACGCAGCCCGTTGTCCAAGATGCTGACCTaGGTCTCCGGCACGCTCTGGAGGGCCTGGGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: EATRSPLSKMLT*VSGTLWRAWAK Trigger: CTTCGCCCAGGCCCTCCAGAGCGTGCCGGAGACCCAGGTCAGCATCTTGGACAACGGGCTGCGTGTGGCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
||
| CDS CAA 90 bp | GTGCAGGTAGCATGCGAGGACTGCTCCGAGGCCACACGCAGCCCGTaGTCCAAGATGCTGACCTGGGTCTCCGGCACGCTCTGGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VQVACEDCSEATRSP*SKMLTWVSGTLWRA Trigger: GGCCCTCCAGAGCGTGCCGGAGACCCAGGTCAGCATCTTGGACAACGGGCTGCGTGTGGCCTCGGAGCAGTCCTCGCATGCTACCTGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026743.14 ENSMUST00000194047.3 |
||
| CDS CCA 72 bp | ATGCTGACCTGGGTCTCCGGCACGCTCTGGAGGGCCTaGGCGAAGGTTGCGGTACCCCGCAAGGCAGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: MLTWVSGTLWRA*AKVAVPRKAGN Trigger: GTTACCTGCCTTGCGGGGTACCGCAACCTTCGCCCAGGCCCTCCAGAGCGTGCCGGAGACCCAGGTCAGCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
||
| CDS CAA 72 bp | GCATGCGAGGACTGCTCCGAGGCCACACGCAGCCCGTaGTCCAAGATGCTGACCTGGGTCTCCGGCACGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ACEDCSEATRSP*SKMLTWVSGTL Trigger: GAGCGTGCCGGAGACCCAGGTCAGCATCTTGGACAACGGGCTGCGTGTGGCCTCGGAGCAGTCCTCGCATGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026743.14 ENSMUST00000194047.3 |
||
| CDS GCA 72 bp | CCAGCGTCAATCCACACTCCCACCGTGCAGGTAGCATaGGAGGACTGCTCCGAGGCCACACGCAGCCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PASIHTPTVQVA*EDCSEATRSPL Trigger: CAACGGGCTGCGTGTGGCCTCGGAGCAGTCCTCGCATGCTACCTGCACGGTGGGAGTGTGGATTGACGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026743.14 ENSMUST00000194047.3 |
||
| CDS CCA 72 bp | TTGTCCAAGATGCTGACCTGGGTCTCCGGCACGCTCTaGAGGGCCTGGGCGAAGGTTGCGGTACCCCGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSKMLTWVSGTL*RAWAKVAVPRK Trigger: CTTGCGGGGTACCGCAACCTTCGCCCAGGCCCTCCAGAGCGTGCCGGAGACCCAGGTCAGCATCTTGGACAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
||
| CDS GCA 72 bp | ATCCACACTCCCACCGTGCAGGTAGCATGCGAGGACTaGTCCGAGGCCACACGCAGCCCGTTGTCCAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: IHTPTVQVACED*SEATRSPLSKM Trigger: CATCTTGGACAACGGGCTGCGTGTGGCCTCGGAGCAGTCCTCGCATGCTACCTGCACGGTGGGAGTGTGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026743.14 ENSMUST00000194047.3 |
||
| CDS GCA 72 bp | CACGTTGTCTGGGTTAGCCCAGCCAGGTCCCTCTACTaGAATGGCCACGTGGGCCAAAGGCAGGGCGTCATC | + |
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Preference number: 6 (lower is better) Translates to: HVVWVSPARSLY*NGHVGQRQGVI Trigger: GATGACGCCCTGCCTTTGGCCCACGTGGCCATTGCAGTAGAGGGACCTGGCTGGGCTAACCCAGACAACGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS GCA 72 bp | GTCTGGGAGCTGCTCGATGGGGCTCAGCCAGAGGGATaGGGCGGCCATAAGTCAGGAGACTGCGACCAATGT | + |
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Preference number: 6 (lower is better) Translates to: VWELLDGAQPEG*GGHKSGDCDQC Trigger: ACATTGGTCGCAGTCTCCTGACTTATGGCCGCCGCATCCCTCTGGCTGAGCCCCATCGAGCAGCTCCCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194469.2 |
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| CDS CCA 72 bp | CAGCCAGAACATGCCACTGCGGATCCGGTTGTAGTCTaGGAGCTGCTCGATGGGGCCATAGCCAGCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: QPEHATADPVVV*ELLDGAIASHC Trigger: GCAGTGGCTGGCTATGGCCCCATCGAGCAGCTCCCAGACTACAACCGGATCCGCAGTGGCATGTTCTGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS CCA 72 bp | CAGCCAGAACATGCCACTGCGGATCCGGTTGTAGTCTaGGAGCTGCTCGATGGGGCTCAGCCAGAGGGATGC | + |
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Preference number: 6 (lower is better) Translates to: QPEHATADPVVV*ELLDGAQPEGC Trigger: GCATCCCTCTGGCTGAGCCCCATCGAGCAGCTCCCAGACTACAACCGGATCCGCAGTGGCATGTTCTGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194469.2 |
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| CDS GCA 72 bp | CCTCCTGAATCCGGCTCTCCCACTCAGCCAGAGGGATaGGGCGGCCATAAGTCAGGAGACTGCGACCAATGT | + |
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Preference number: 6 (lower is better) Translates to: PPESGSPTQPEG*GGHKSGDCDQC Trigger: ACATTGGTCGCAGTCTCCTGACTTATGGCCGCCGCATCCCTCTGGCTGAGTGGGAGAGCCGGATTCAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS GCA 72 bp | ACACTGCTCAAGTGTTTCTGGGCAAGGTCCAGCAGCTaGTGGTGTTCCACACCTCCAGCTGCAGCCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: TLLKCFWARSSS*WCSTPPAAAST Trigger: GGTGCTGGCTGCAGCTGGAGGTGTGGAACACCAGCAGCTGCTGGACCTTGCCCAGAAACACTTGAGCAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS GCA 72 bp | CAGCCAGAGGGATGCGGCGGCCATAAGTCAGGAGACTaGGACCAATGTCTTCACACACAGGGGTGGTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: QPEGCGGHKSGD*DQCLHTQGWCH Trigger: ATGGCACCACCCCTGTGTGTGAAGACATTGGTCGCAGTCTCCTGACTTATGGCCGCCGCATCCCTCTGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026743.14 ENSMUST00000194469.2 |
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| CDS GCA 72 bp | GACTTCCTGCCTAGAAGCGCAGCCAGAACATGCCACTaGGGATCCGGTTGTAGTCTGGGAGCTGCTCGATGG | + |
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Preference number: 6 (lower is better) Translates to: DFLPRSAARTCH*GSGCSLGAARW Trigger: CCATCGAGCAGCTCCCAGACTACAACCGGATCCGCAGTGGCATGTTCTGGCTGCGCTTCTAGGCAGGAAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194469.2 |
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| CDS CCA 72 bp | CTGCTCAAGTGTTTCTGGGCAAGGTCCAGCAGCTGCTaGTGTTCCACACCTCCAGCTGCAGCCAGCACCATC | + |
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Preference number: 6 (lower is better) Translates to: LLKCFWARSSSC*CSTPPAAASTI Trigger: GATGGTGCTGGCTGCAGCTGGAGGTGTGGAACACCAGCAGCTGCTGGACCTTGCCCAGAAACACTTGAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS GCA 72 bp | TGTGCAGACTTCCTGCCTAGAAGCGCAGCCAGAACATaGCACTGCGGATCCGGTTGTAGTCTGGGAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: CADFLPRSAART*HCGSGCSLGAA Trigger: AGCAGCTCCCAGACTACAACCGGATCCGCAGTGGCATGTTCTGGCTGCGCTTCTAGGCAGGAAGTCTGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194469.2 |
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| CDS CAA 72 bp | TGGCCTATGATGGCATTGGCCACTTGGAGGGTCACGTaGTCTGGGTTAGCCCAGCCAGGTCCCTCTACTGCA | + |
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Preference number: 6 (lower is better) Translates to: WPMMALATWRVT*SGLAQPGPSTA Trigger: TGCAGTAGAGGGACCTGGCTGGGCTAACCCAGACAACGTGACCCTCCAAGTGGCCAATGCCATCATAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS CAA 90 bp | ACCACCGTAAGTGCAGTCATAGTGGCCTATGATGGCATTGGCCACTaGGAGGGTCACGTTGTCTGGGTTAGCCCAGCCAGGTCCCTCTAC | + |
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Preference number: 6 (lower is better) Translates to: TTVSAVIVAYDGIGH*EGHVVWVSPARSLY Trigger: GTAGAGGGACCTGGCTGGGCTAACCCAGACAACGTGACCCTCCAAGTGGCCAATGCCATCATAGGCCACTATGACTGCACTTACGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS CCA 72 bp | TATGATGGCATTGGCCACTTGGAGGGTCACGTTGTCTaGGTTAGCCCAGCCAGGTCCCTCTACTGCAATGGC | + |
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Preference number: 6 (lower is better) Translates to: YDGIGHLEGHVV*VSPARSLYCNG Trigger: GCCATTGCAGTAGAGGGACCTGGCTGGGCTAACCCAGACAACGTGACCCTCCAAGTGGCCAATGCCATCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS CAA 72 bp | AGTGCAGTCATAGTGGCCTATGATGGCATTGGCCACTaGGAGGGTCACGTTGTCTGGGTTAGCCCAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SAVIVAYDGIGH*EGHVVWVSPAR Trigger: CCTGGCTGGGCTAACCCAGACAACGTGACCCTCCAAGTGGCCAATGCCATCATAGGCCACTATGACTGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS CAA 90 bp | GTCTGGGAGCTGCTCGATGGGGCCATAGCCAGCCACTGCTGGACATaGGTCATAAAAGTACTTGGAGCAAATGTCACGCAGCATCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: VWELLDGAIASHCWT*VIKVLGANVTQHLG Trigger: GCCCAGATGCTGCGTGACATTTGCTCCAAGTACTTTTATGACCAATGTCCAGCAGTGGCTGGCTATGGCCCCATCGAGCAGCTCCCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS TCA 72 bp | GCACTCCACCACCGTAAGTGCAGTCATAGTGGCCTATaGTGGCATTGGCCACTTGGAGGGTCACGTTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: ALHHRKCSHSGL*WHWPLGGSRCL Trigger: CAGACAACGTGACCCTCCAAGTGGCCAATGCCATCATAGGCCACTATGACTGCACTTACGGTGGTGGAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS TCA 72 bp | AAGCTTGTTAGCCACAGCAACGGAAGCCAGCGGGCTTaGCAGGTGCACTCCACCACCGTAAGTGCAGTCATA | + |
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Preference number: 6 (lower is better) Translates to: KLVSHSNGSQRA*QVHSTTVSAVI Trigger: TATGACTGCACTTACGGTGGTGGAGTGCACCTGTCAAGCCCGCTGGCTTCCGTTGCTGTGGCTAACAAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026743.14 ENSMUST00000194469.2 |
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| CDS GCA 72 bp | CAGGCACGGCATCTTCTTCATACACTCGGGAGACACTaGTCAAGTGTTTCTGGGCAAGGTCCAGCAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: QARHLLHTLGRH*SSVSGQGPAAA Trigger: AGCAGCTGCTGGACCTTGCCCAGAAACACTTGAGCAGTGTCTCCCGAGTGTATGAAGAAGATGCCGTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS CCA 72 bp | ATCGCGATGGCGGATCTCACTGCCAGTGAAGCGACATaGAGTGAGACCAGGCACGGCATCTTCTTCATACAC | + |
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Preference number: 6 (lower is better) Translates to: IAMADLTASEAT*SETRHGIFFIH Trigger: GTGTATGAAGAAGATGCCGTGCCTGGTCTCACTCCATGTCGCTTCACTGGCAGTGAGATCCGCCATCGCGAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS GCA 72 bp | CAGGAGCTCCACAACTTTTGGCAGGTCCTTGGACAGTaGCTTGATGAGGTAAGCAGTGTGCTCTCGAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: QELHNFWQVLGQ*LDEVSSVLSSA Trigger: AGCACTCGAGAGCACACTGCTTACCTCATCAAGGCACTGTCCAAGGACCTGCCAAAAGTTGTGGAGCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026743.14 ENSMUST00000194047.3 |
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| CDS CCA 72 bp | TCTTCATACACTCGGGAGACACTGCTCAAGTGTTTCTaGGCAAGGTCCAGCAGCTGCTGGTGTTCCACACCT | + |
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Preference number: 6 (lower is better) Translates to: SSYTRETLLKCF*ARSSSCWCSTP Trigger: AGGTGTGGAACACCAGCAGCTGCTGGACCTTGCCCAGAAACACTTGAGCAGTGTCTCCCGAGTGTATGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS GCA 72 bp | TCAAAGACCACGTTCTGCATGGAGGCGTCATTTTCCTaGATCTCCCGCAGGATCACATCTCGTTCCTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: SKTTFCMEASFS*ISRRITSRSFS Trigger: CGAGAAGGAACGAGATGTGATCCTGCGGGAGATGCAGGAAAATGACGCCTCCATGCAGAACGTGGTCTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026743.14 ENSMUST00000194047.3 |
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| CDS GCA 72 bp | GTCTGGGAGCTGCTCGATGGGGCCATAGCCAGCCACTaGTGGACATTGGTCATAAAAGTACTTGGAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: VWELLDGAIASH*WTLVIKVLGAN Trigger: ATTTGCTCCAAGTACTTTTATGACCAATGTCCAGCAGTGGCTGGCTATGGCCCCATCGAGCAGCTCCCAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS CCA 72 bp | TGGGAGCTGCTCGATGGGGCCATAGCCAGCCACTGCTaGACATTGGTCATAAAAGTACTTGGAGCAAATGTC | + |
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Preference number: 6 (lower is better) Translates to: WELLDGAIASHC*TLVIKVLGANV Trigger: GACATTTGCTCCAAGTACTTTTATGACCAATGTCCAGCAGTGGCTGGCTATGGCCCCATCGAGCAGCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS CAA 72 bp | CTGCTCGATGGGGCCATAGCCAGCCACTGCTGGACATaGGTCATAAAAGTACTTGGAGCAAATGTCACGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLDGAIASHCWT*VIKVLGANVTQ Trigger: CTGCGTGACATTTGCTCCAAGTACTTTTATGACCAATGTCCAGCAGTGGCTGGCTATGGCCCCATCGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS TCA 72 bp | CTCCCGCAGGATCACATCTCGTTCCTTCTCGATCTGTaGGTCTTCCAGACTACTGTTCTGCACGATATCTGC | + |
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Preference number: 6 (lower is better) Translates to: LPQDHISFLLDL*VFQTTVLHDIC Trigger: GCAGATATCGTGCAGAACAGTAGTCTGGAAGACTCACAGATCGAGAAGGAACGAGATGTGATCCTGCGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026743.14 ENSMUST00000194047.3 |
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| CDS CCA 72 bp | AGCCAGCCACTGCTGGACATTGGTCATAAAAGTACTTaGAGCAAATGTCACGCAGCATCTGGGCATCCACCT | + |
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Preference number: 6 (lower is better) Translates to: SQPLLDIGHKST*SKCHAASGHPP Trigger: AGGTGGATGCCCAGATGCTGCGTGACATTTGCTCCAAGTACTTTTATGACCAATGTCCAGCAGTGGCTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026743.14 |
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| CDS TCA 72 bp | CCAATGTCTTCACACACAGGGGTGGTGCCATCCAAATaGGACACCAAAGCATTCCTAAGGATGTTTTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: PMSSHTGVVPSK*DTKAFLRMFLP Trigger: GGGCAAAAACATCCTTAGGAATGCTTTGGTGTCTCATTTGGATGGCACCACCCCTGTGTGTGAAGACATTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026743.14 ENSMUST00000194469.2 |
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