Pregenerated sensors for UQCR10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059534

Ensembl transcript IDs: ENSMUST00000058407.6

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	ACTTTGCATTTATTTGCTGACAGCTGTACTCAAACACAGCAGAAGTaGGTCTGTTTGTACAGTGGAGCCATAGCTTGCCCACACACTGGC	+
Preference number: 1 (lower is better) Translates to: TLHLFADSCTQTQQK*VCLYSGAIACPHTG Trigger: GCCAGTGTGTGGGCAAGCTATGGCTCCACTGTACAAACAGACTCACTTCTGCTGTGTTTGAGTACAGCTGTCAGCAAATAAATGCAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058407.6
3UTR CAA 90 bp	TGGAGCCATAGCTTGCCCACACACTGGCGGTCGGTGAACGGCAACTaGAAACTCATCCTTAGGCTGAGGCCCCAACTCCAGGCAAACAGC	+
Preference number: 2 (lower is better) Translates to: WSHSLPTHWRSVNGN*KLILRLRPQLQANS Trigger: GCTGTTTGCCTGGAGTTGGGGCCTCAGCCTAAGGATGAGTTTCAAGTTGCCGTTCACCGACCGCCAGTGTGTGGGCAAGCTATGGCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058407.6
3UTR CAA 90 bp	TCAAACACAGCAGAAGTGAGTCTGTTTGTACAGTGGAGCCATAGCTaGCCCACACACTGGCGGTCGGTGAACGGCAACTTGAAACTCATC	+
Preference number: 2 (lower is better) Translates to: SNTAEVSLFVQWSHS*PTHWRSVNGNLKLI Trigger: GATGAGTTTCAAGTTGCCGTTCACCGACCGCCAGTGTGTGGGCAAGCTATGGCTCCACTGTACAAACAGACTCACTTCTGCTGTGTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058407.6
3UTR CCA 72 bp	TACTCAAACACAGCAGAAGTGAGTCTGTTTGTACAGTaGAGCCATAGCTTGCCCACACACTGGCGGTCGGTG	+
Preference number: 3 (lower is better) Translates to: YSNTAEVSLFVQ*SHSLPTHWRSV Trigger: CACCGACCGCCAGTGTGTGGGCAAGCTATGGCTCCACTGTACAAACAGACTCACTTCTGCTGTGTTTGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058407.6
CDS-3UTR TCA 90 bp	TCCAGGCAAACAGCTGACCGGCGACTGTTCCTTCGGGTCCCACAGGGGCAGGGTATCGCGTCTGCGCCCTaGTCGAAGGCTCGCTCGAAG	+
Preference number: 4 (lower is better) Translates to: SRQTADRRLFLRVPQGQGIASAP*SKARSK Trigger: CTTCGAGCGAGCCTTCGATCAGGGCGCAGACGCGAT...ACCCTGCCCCTGTGGGACCCGAAGGAACAGTCGCCGGTCAGCTGTTTGCCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058407.6
3UTR CAA 72 bp	AGCTTGCCCACACACTGGCGGTCGGTGAACGGCAACTaGAAACTCATCCTTAGGCTGAGGCCCCAACTCCAG	+
Preference number: 4 (lower is better) Translates to: SLPTHWRSVNGN*KLILRLRPQLQ Trigger: CTGGAGTTGGGGCCTCAGCCTAAGGATGAGTTTCAAGTTGCCGTTCACCGACCGCCAGTGTGTGGGCAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058407.6
CDS-3UTR TCA 90 bp	CTGACAGCTGTACTCAAACACAGCAGAAGTGAGTCTGTTTGTACAGTGGAGCCACGCCCACTGCGATGGTaGGGGCAAAGGTGGAAGTTC	+
Preference number: 4 (lower is better) Translates to: LTAVLKHSRSESVCTVEPRPLRW*GQRWKF Trigger: GAACTTCCACCTTTGCCCTCACCATCGCAGTGGGCG...TGGCTCCACTGTACAAACAGACTCACTTCTGCTGTGTTTGAGTACAGCTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058407.6
CDS-3UTR GCA 90 bp	TATTTGCTGACAGCTGTACTCAAACACAGCAGAAGTGAGTCTGTTTGTACAGTGCTCGTAGATCGCGTCTaGGCCCTGATCGAAGGCTCG	+
Preference number: 4 (lower is better) Translates to: YLLTAVLKHSRSESVCTVLVDRV*ALIEGS Trigger: CGAGCCTTCGATCAGGGCGCAGACGCGATCTACGAG...CACTGTACAAACAGACTCACTTCTGCTGTGTTTGAGTACAGCTGTCAGCAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058407.6
CDS-3UTR CAA 90 bp	AACACAGCAGAAGTGAGTCTGTTTGTACAGTGGAGCCATAGCTTGCCCACACACTCCTTGTTCTCATACTaGTGCTTTATATGTTTCCAC	+
Preference number: 5 (lower is better) Translates to: NTAEVSLFVQWSHSLPTHSLFSY*CFICFH Trigger: GTGGAAACATATAAAGCACAAGTATGAGAACAAGGA...GTGTGTGGGCAAGCTATGGCTCCACTGTACAAACAGACTCACTTCTGCTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058407.6