Pregenerated sensors for UQCC3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000071654

Ensembl transcript IDs: ENSMUST00000096253.7

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	AAGGCGTTCCCCCAACCGCAGTTCCCAGTGACTTGGAGAGAGTCCTaGTGTATCTCCCGACTCCATGTCCGGAGCACCAAGAAAGGAGCC	+
Preference number: 1 (lower is better) Translates to: KAFPQPQFPVTWRES*CISRLHVRSTKKGA Trigger: GGCTCCTTTCTTGGTGCTCCGGACATGGAGTCGGGAGATACACCAGGACTCTCTCCAAGTCACTGGGAACTGCGGTTGGGGGAACGCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096253.7
3UTR CCA 90 bp	ATGTGCTCTTTAAAGGCGTTCCCCCAACCGCAGTTCCCAGTGACTTaGAGAGAGTCCTGGTGTATCTCCCGACTCCATGTCCGGAGCACC	+
Preference number: 1 (lower is better) Translates to: MCSLKAFPQPQFPVT*RESWCISRLHVRST Trigger: GGTGCTCCGGACATGGAGTCGGGAGATACACCAGGACTCTCTCCAAGTCACTGGGAACTGCGGTTGGGGGAACGCCTTTAAAGAGCACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096253.7
3UTR GCA 90 bp	TTATTAGTTCCGTTGGTTCCACACATCCGACCCTGTCAGGCGATGTaGTCTTTAAAGGCGTTCCCCCAACCGCAGTTCCCAGTGACTTGG	+
Preference number: 1 (lower is better) Translates to: LLVPLVPHIRPCQAM*SLKAFPQPQFPVTW Trigger: CCAAGTCACTGGGAACTGCGGTTGGGGGAACGCCTTTAAAGAGCACATCGCCTGACAGGGTCGGATGTGTGGAACCAACGGAACTAATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096253.7
3UTR CAA 90 bp	GATGTGCTCTTTAAAGGCGTTCCCCCAACCGCAGTTCCCAGTGACTaGGAGAGAGTCCTGGTGTATCTCCCGACTCCATGTCCGGAGCAC	+
Preference number: 2 (lower is better) Translates to: DVLFKGVPPTAVPSD*ERVLVYLPTPCPEH Trigger: GTGCTCCGGACATGGAGTCGGGAGATACACCAGGACTCTCTCCAAGTCACTGGGAACTGCGGTTGGGGGAACGCCTTTAAAGAGCACATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096253.7
3UTR CCA 72 bp	CCCCAACCGCAGTTCCCAGTGACTTGGAGAGAGTCCTaGTGTATCTCCCGACTCCATGTCCGGAGCACCAAG	+
Preference number: 3 (lower is better) Translates to: PQPQFPVTWRES*CISRLHVRSTK Trigger: CTTGGTGCTCCGGACATGGAGTCGGGAGATACACCAGGACTCTCTCCAAGTCACTGGGAACTGCGGTTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096253.7
3UTR CCA 72 bp	TTAAAGGCGTTCCCCCAACCGCAGTTCCCAGTGACTTaGAGAGAGTCCTGGTGTATCTCCCGACTCCATGTC	+
Preference number: 3 (lower is better) Translates to: LKAFPQPQFPVT*RESWCISRLHV Trigger: GACATGGAGTCGGGAGATACACCAGGACTCTCTCCAAGTCACTGGGAACTGCGGTTGGGGGAACGCCTTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096253.7
3UTR GCA 72 bp	GACTTAAGAACTCTCAGGGGTAGGATGGCATGCAGTTaGCTAGGTCTTCAGCGCACATTGCGCTCTCTCACA	+
Preference number: 3 (lower is better) Translates to: DLRTLRGRMACS*LGLQRTLRSLT Trigger: TGTGAGAGAGCGCAATGTGCGCTGAAGACCTAGGCAACTGCATGCCATCCTACCCCTGAGAGTTCTTAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096253.7
CDS-3UTR GCA 90 bp	AAGGCGTTCCCCCAACCGCAGTTCCCAGTGACTTGGAGAGAGTCCTGGTGTATCTCCTGCAGCATCGACTaGTTCTGTAGTTCTCCTGGG	+
Preference number: 4 (lower is better) Translates to: KAFPQPQFPVTWRESWCISCSID*FCSSPG Trigger: CCCAGGAGAACTACAGAAGCAGTCGATGCTGCAGGA...GATACACCAGGACTCTCTCCAAGTCACTGGGAACTGCGGTTGGGGGAACGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096253.7
3UTR CAA 72 bp	TTTAAAGGCGTTCCCCCAACCGCAGTTCCCAGTGACTaGGAGAGAGTCCTGGTGTATCTCCCGACTCCATGT	+
Preference number: 4 (lower is better) Translates to: FKGVPPTAVPSD*ERVLVYLPTPC Trigger: ACATGGAGTCGGGAGATACACCAGGACTCTCTCCAAGTCACTGGGAACTGCGGTTGGGGGAACGCCTTTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096253.7
CDS-3UTR TCA 90 bp	TCCAGCTGCGAAATCCACTTAATGGATGAACTGCATTTATTAGTTCCGTTGGTTCCAGTTCCGTGGTCCTaGCTGCTTCGTCCCTGCGCC	+
Preference number: 4 (lower is better) Translates to: SSCEIHLMDELHLLVPLVPVPWS*LLRPCA Trigger: GGCGCAGGGACGAAGCAGTCAGGACCACGGAACTGG...AACCAACGGAACTAATAAATGCAGTTCATCCATTAAGTGGATTTCGCAGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096253.7
CDS GCA 90 bp	GCTAACTGTCCAGTTTCTCCTCCAGGCCACGTTCTCCTTCGTGGCTaGGGCGTCCTTCAGGGTAGCCATCACCAGTTCCGTGGTCCTGAC	+
Preference number: 5 (lower is better) Translates to: ANCPVSPPGHVLLRG*GVLQGSHHQFRGPD Trigger: GTCAGGACCACGGAACTGGTGATGGCTACCCTGAAGGACGCCGCAGCCACGAAGGAGAACGTGGCCTGGAGGAGAAACTGGACAGTTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096253.7
CDS GCA 90 bp	TCCCTGCGCCGCGAGTCCCTTTCCGGCATCTCCTGCAGCATCGACTaGTTCTGTAGTTCTCCTGGGGTCACAAGAGCAAACAGAATAGAA	+
Preference number: 5 (lower is better) Translates to: SLRRESLSGISCSID*FCSSPGVTRANRIE Trigger: TTCTATTCTGTTTGCTCTTGTGACCCCAGGAGAACTACAGAAGCAGTCGATGCTGCAGGAGATGCCGGAAAGGGACTCGCGGCGCAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096253.7
CDS GCA 72 bp	CGCGAGTCCCTTTCCGGCATCTCCTGCAGCATCGACTaGTTCTGTAGTTCTCCTGGGGTCACAAGAGCAAAC	+
Preference number: 6 (lower is better) Translates to: RESLSGISCSID*FCSSPGVTRAN Trigger: GTTTGCTCTTGTGACCCCAGGAGAACTACAGAAGCAGTCGATGCTGCAGGAGATGCCGGAAAGGGACTCGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096253.7