Pregenerated sensors for UQCC2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024208

Ensembl transcript IDs: ENSMUST00000025045.15, ENSMUST00000118613.8, ENSMUST00000119227.3

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TGTCTGTGGACAGGATCAGCTTGTACTCTTCCACGGACAGGCCACTaGAGCTGGTGTCTCTGGGGCGAGGGTACTTGTGCTTGTAGTAGT	+
Preference number: 5 (lower is better) Translates to: CLWTGSACTLPRTGH*SWCLWGEGTCACSS Trigger: ACTACTACAAGCACAAGTACCCTCGCCCCAGAGACACCAGCTTCAGTGGCCTGTCCGTGGAAGAGTACAAGCTGATCCTGTCCACAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025045.15 ENSMUST00000118613.8 ENSMUST00000119227.3
CDS GCA 90 bp	CCTCAGGCCTGGTGGGCGCAAACTTCTCCTGCAGTTTCTTCCACATaGTCTTATTCATCTCTTGGAACTCTTCCAAAGTGTCTGTGGACA	+
Preference number: 5 (lower is better) Translates to: PQAWWAQTSPAVSST*SYSSLGTLPKCLWT Trigger: TGTCCACAGACACTTTGGAAGAGTTCCAAGAGATGAATAAGAGCATGTGGAAGAAACTGCAGGAGAAGTTTGCGCCCACCAGGCCTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025045.15 ENSMUST00000118613.8 ENSMUST00000119227.3
CDS GCA 72 bp	GTCCGTGGGCGGGACAGGACCCGAGTCCAGGCCTTGTaGTTCTCCTCAGGCCTGGTGGGCGCAAACTTCTCC	+
Preference number: 6 (lower is better) Translates to: VRGRDRTRVQAL*FSSGLVGANFS Trigger: GGAGAAGTTTGCGCCCACCAGGCCTGAGGAGAAGCACAAGGCCTGGACTCGGGTCCTGTCCCGCCCACGGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025045.15 ENSMUST00000118613.8 ENSMUST00000119227.3
CDS CAA 72 bp	CAGGTCCGTGGGCGGGACAGGACCCGAGTCCAGGCCTaGTGCTTCTCCTCAGGCCTGGTGGGCGCAAACTTC	+
Preference number: 6 (lower is better) Translates to: QVRGRDRTRVQA*CFSSGLVGANF Trigger: GAAGTTTGCGCCCACCAGGCCTGAGGAGAAGCACAAGGCCTGGACTCGGGTCCTGTCCCGCCCACGGACCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025045.15 ENSMUST00000118613.8 ENSMUST00000119227.3
CDS TCA 72 bp	ACAGGATCAGCTTGTACTCTTCCACGGACAGGCCACTaGAGCTGGTGTCTCTGGGGCGAGGGTACTTGTGCT	+
Preference number: 6 (lower is better) Translates to: TGSACTLPRTGH*SWCLWGEGTCA Trigger: AGCACAAGTACCCTCGCCCCAGAGACACCAGCTTCAGTGGCCTGTCCGTGGAAGAGTACAAGCTGATCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025045.15 ENSMUST00000118613.8 ENSMUST00000119227.3
CDS CAA 90 bp	TTCATCTCTTGGAACTCTTCCAAAGTGTCTGTGGACAGGATCAGCTaGTACTCTTCCACGGACAGGCCACTGAAGCTGGTGTCTCTGGGG	+
Preference number: 6 (lower is better) Translates to: FISWNSSKVSVDRIS*YSSTDRPLKLVSLG Trigger: CCCCAGAGACACCAGCTTCAGTGGCCTGTCCGTGGAAGAGTACAAGCTGATCCTGTCCACAGACACTTTGGAAGAGTTCCAAGAGATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025045.15 ENSMUST00000118613.8 ENSMUST00000119227.3
CDS CAA 72 bp	TGTCTCTGGGGCGAGGGTACTTGTGCTTGTAGTAGTTaGAATGCAGTCGTGCTAAGCTCTCGTACATCTGGG	+
Preference number: 6 (lower is better) Translates to: CLWGEGTCACSS*NAVVLSSRTSG Trigger: CCCAGATGTACGAGAGCTTAGCACGACTGCATTCAAACTACTACAAGCACAAGTACCCTCGCCCCAGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119227.3
CDS CAA 72 bp	TGTCTCTGGGGCGAGGGTACTTGTGCTTGTAGTAGTTaGAATGCAGTCGTGCTAAGCTCTCGTACATCTGAT	+
Preference number: 6 (lower is better) Translates to: CLWGEGTCACSS*NAVVLSSRTSD Trigger: ATCAGATGTACGAGAGCTTAGCACGACTGCATTCAAACTACTACAAGCACAAGTACCCTCGCCCCAGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025045.15 ENSMUST00000118613.8

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