Pregenerated sensors for UPRT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073016Ensembl transcript IDs: ENSMUST00000087867.6
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAAGTACCTTCCCTCAATTCCCACTTGGGGAAATGAGCCAGCCTTaGGGAATACAACGGCTTAGCAGACAAGTTAAGCGGACATCTTGG | + |
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Preference number: 1 (lower is better) Translates to: VSTFPQFPLGEMSQP*GIQRLSRQVKRTSW Trigger: CCAAGATGTCCGCTTAACTTGTCTGCTAAGCCGTTGTATTCCTCAAGGCTGGCTCATTTCCCCAAGTGGGAATTGAGGGAAGGTACTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR GCA 90 bp | GGAATACAACGGCTTAGCAGACAAGTTAAGCGGACATCTTGGGCCTaGAAATTAAGTGAGGACATAAATGGCAACATAAAATTCCGGGAT | + |
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Preference number: 1 (lower is better) Translates to: GIQRLSRQVKRTSWA*KLSEDINGNIKFRD Trigger: ATCCCGGAATTTTATGTTGCCATTTATGTCCTCACTTAATTTGCAGGCCCAAGATGTCCGCTTAACTTGTCTGCTAAGCCGTTGTATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR GCA 90 bp | ATAGAAACAACTAAATTAAAAAGAACCGTATTGCATATTGTGTTGTaGTGCATGCCTTTAATCCCAGAACTTGGGAGGCAGAAGCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: IETTKLKRTVLHIVL*CMPLIPELGRQKQV Trigger: CACCTGCTTCTGCCTCCCAAGTTCTGGGATTAAAGGCATGCAGCACAACACAATATGCAATACGGTTCTTTTTAATTTAGTTGTTTCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR-3UTR TCA 90 bp | TTAATCCCAGAACTTGGGAGGCAGAAGCAGGTGGATCTCTATGAGTTCAAGGCCACCTGGTCTACACAGTaGGTTCCAGGACAGCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: LIPELGRQKQVDLYEFKATWSTQ*VPGQPE Trigger: CTCGGGCTGTCCTGGAACTCACTGTGTAGACCAGGT...GGCCTTGAACTCATAGAGATCCACCTGCTTCTGCCTCCCAAGTTCTGGGATTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGAACTTGGGAGGCAGAAGCAGGTGGATCTCTATGAGTTCAAGGCCAACCTCCTTTGTAGAAGGCTaGTTGAGCTCTCTTGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: SQNLGGRSRWISMSSRPTSFVEG*LSSLGS Trigger: TGACCCAAGAGAGCTCAATCAGCCTTCTACAAAGGA...GGTTGGCCTTGAACTCATAGAGATCCACCTGCTTCTGCCTCCCAAGTTCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR-3UTR CCA 90 bp | TTAATCCCAGAACTTGGGAGGCAGAAGCAGGTGGATCTCTATGAGTTCAAGGCCCCCTCAATTCCCACTTaGGGAAATGAGCCAGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LIPELGRQKQVDLYEFKAPSIPT*GNEPAL Trigger: CAAGGCTGGCTCATTTCCCCAAGTGGGAATTGAGGG...GGCCTTGAACTCATAGAGATCCACCTGCTTCTGCCTCCCAAGTTCTGGGATTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGAACTTGGGAGGCAGAAGCAGGTGGATCTCTATGAGTTCAAGGCCAACCATCGGTTTTAAGCACTaGGGTTGTGCTTCATTGTTG | + |
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Preference number: 2 (lower is better) Translates to: SQNLGGRSRWISMSSRPTIGFKH*GCASLL Trigger: CAACAATGAAGCACAACCTCAGTGCTTAAAACCGAT...GGTTGGCCTTGAACTCATAGAGATCCACCTGCTTCTGCCTCCCAAGTTCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGTTCCAGGACAGCCCGAGGAACACAGAGAAACCCTACCTTGAAAAACAATTCCAAACCAAGAGATaGGGTCCTAAGTTCTACAGT | + |
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Preference number: 2 (lower is better) Translates to: SEFQDSPRNTEKPYLEKQFQTKR*GPKFYS Trigger: ACTGTAGAACTTAGGACCCCATCTCTTGGTTTGGAA...TTGTTTTTCAAGGTAGGGTTTCTCTGTGTTCCTCGGGCTGTCCTGGAACTCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR CAA 90 bp | GTAAACCTGCAGTGTACCAAAGAACTAACTCTCATTTGGGTTTTCTaGGCAGCTACAAGCAACTTCCAAACCAAGAGATGGGGTCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: VNLQCTKELTLIWVF*AATSNFQTKRWGPK Trigger: CTTAGGACCCCATCTCTTGGTTTGGAAGTTGCTTGTAGCTGCCAAGAAAACCCAAATGAGAGTTAGTTCTTTGGTACACTGCAGGTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR-3UTR GCA 90 bp | AGTGAGTTCCAGGACAGCCCGAGGAACACAGAGAAACCCTACCTTGAAAAACAATTACTGAAAAGACCCTaGGTCTTTGTCACCATGTTA | + |
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Preference number: 2 (lower is better) Translates to: SEFQDSPRNTEKPYLEKQLLKRP*VFVTML Trigger: TAACATGGTGACAAAGACGCAGGGTCTTTTCAGTAA...TTGTTTTTCAAGGTAGGGTTTCTCTGTGTTCCTCGGGCTGTCCTGGAACTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR-3UTR GCA 90 bp | TTAATCCCAGAACTTGGGAGGCAGAAGCAGGTGGATCTCTATGAGTTCAAGGCCTCCAATATTTCTTGTTaGTACACCTACTTCCAATGT | + |
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Preference number: 2 (lower is better) Translates to: LIPELGRQKQVDLYEFKASNISC*YTYFQC Trigger: ACATTGGAAGTAGGTGTAGCAACAAGAAATATTGGA...GGCCTTGAACTCATAGAGATCCACCTGCTTCTGCCTCCCAAGTTCTGGGATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR-3UTR CCA 90 bp | AACATAAAATTCCGGGATATACTCTCATTCTCTCTTCTTCAAGGTACCTGCATGTCATTTGGGTTTTCTTaGCAGCTACAAGCAACTTCC | + |
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Preference number: 2 (lower is better) Translates to: NIKFRDILSFSLLQGTCMSFGFS*QLQATS Trigger: GGAAGTTGCTTGTAGCTGCCAAGAAAACCCAAATGA...CATGCAGGTACCTTGAAGAAGAGAGAATGAGAGTATATCCCGGAATTTTATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR-3UTR CAA 90 bp | TCCCAGAACTTGGGAGGCAGAAGCAGGTGGATCTCTATGAGTTCAAGGCCAACCCTCATTTGGGTTTTCTaGGCAGCTACAAGCAACTTC | + |
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Preference number: 3 (lower is better) Translates to: SQNLGGRSRWISMSSRPTLIWVF*AATSNF Trigger: GAAGTTGCTTGTAGCTGCCAAGAAAACCCAAATGAG...GGTTGGCCTTGAACTCATAGAGATCCACCTGCTTCTGCCTCCCAAGTTCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR TCA 72 bp | TTCCCTCAATTCCCACTTGGGGAAATGAGCCAGCCTTaGGGAATACAACGGCTTAGCAGACAAGTTAAGCGG | + |
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Preference number: 3 (lower is better) Translates to: FPQFPLGEMSQP*GIQRLSRQVKR Trigger: CCGCTTAACTTGTCTGCTAAGCCGTTGTATTCCTCAAGGCTGGCTCATTTCCCCAAGTGGGAATTGAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR CCA 72 bp | TTACAGCTTGGTAAGTACCTTCCCTCAATTCCCACTTaGGGAAATGAGCCAGCCTTGAGGAATACAACGGCT | + |
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Preference number: 3 (lower is better) Translates to: LQLGKYLPSIPT*GNEPALRNTTA Trigger: AGCCGTTGTATTCCTCAAGGCTGGCTCATTTCCCCAAGTGGGAATTGAGGGAAGGTACTTACCAAGCTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR-3UTR CAA 90 bp | TTAATCCCAGAACTTGGGAGGCAGAAGCAGGTGGATCTCTATGAGTTCAAGGCCAACCAAAGAACCGTTTaGATTTCCTTATTGGCCACG | + |
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Preference number: 3 (lower is better) Translates to: LIPELGRQKQVDLYEFKANQRTV*ISLLAT Trigger: CGTGGCCAATAAGGAAATCAAAACGGTTCTTTGGTT...GGCCTTGAACTCATAGAGATCCACCTGCTTCTGCCTCCCAAGTTCTGGGATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR GCA 72 bp | CGGGATATACTCTCATTCTCTCTTCTTCAAGGTACCTaGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: RDILSFSLLQGT*MCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACATGCAGGTACCTTGAAGAAGAGAGAATGAGAGTATATCCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR CCA 72 bp | TTCTTGGCAGCTACAAGCAACTTCCAAACCAAGAGATaGGGTCCTAAGTTCTACAGTCTCCATGGACTAACT | + |
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Preference number: 3 (lower is better) Translates to: FLAATSNFQTKR*GPKFYSLHGLT Trigger: AGTTAGTCCATGGAGACTGTAGAACTTAGGACCCCATCTCTTGGTTTGGAAGTTGCTTGTAGCTGCCAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR CCA 72 bp | ATACAACGGCTTAGCAGACAAGTTAAGCGGACATCTTaGGCCTGCAAATTAAGTGAGGACATAAATGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: IQRLSRQVKRTS*ACKLSEDINGN Trigger: GTTGCCATTTATGTCCTCACTTAATTTGCAGGCCCAAGATGTCCGCTTAACTTGTCTGCTAAGCCGTTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR-3UTR CAA 90 bp | AGTGAGTTCCAGGACAGCCCGAGGAACACAGAGAAACCCTACCTTGAAAAACAATTCCAATATTTCTTGTaGCTACACCTACTTCCAATG | + |
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Preference number: 3 (lower is better) Translates to: SEFQDSPRNTEKPYLEKQFQYFL*LHLLPM Trigger: CATTGGAAGTAGGTGTAGCAACAAGAAATATTGGAA...TTGTTTTTCAAGGTAGGGTTTCTCTGTGTTCCTCGGGCTGTCCTGGAACTCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR-3UTR CAA 90 bp | AGTGAGTTCCAGGACAGCCCGAGGAACACAGAGAAACCCTACCTTGAAAAACAAGCTTCATTGTTGAATTaGGTACCACATGTGAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: SEFQDSPRNTEKPYLEKQASLLN*VPHVKK Trigger: TTTCTTCACATGTGGTACCAAATTCAACAATGAAGC...TTGTTTTTCAAGGTAGGGTTTCTCTGTGTTCCTCGGGCTGTCCTGGAACTCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR GCA 72 bp | CGGCTTAGCAGACAAGTTAAGCGGACATCTTGGGCCTaGAAATTAAGTGAGGACATAAATGGCAACATAAAA | + |
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Preference number: 3 (lower is better) Translates to: RLSRQVKRTSWA*KLSEDINGNIK Trigger: TTTTATGTTGCCATTTATGTCCTCACTTAATTTGCAGGCCCAAGATGTCCGCTTAACTTGTCTGCTAAGCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR CCA 72 bp | GTAAACCTGCAGTGTACCAAAGAACTAACTCTCATTTaGGTTTTCTTGGCAGCTACAAGCAACTTCCAAACC | + |
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Preference number: 3 (lower is better) Translates to: VNLQCTKELTLI*VFLAATSNFQT Trigger: GGTTTGGAAGTTGCTTGTAGCTGCCAAGAAAACCCAAATGAGAGTTAGTTCTTTGGTACACTGCAGGTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR GCA 72 bp | AAATTAAAAAGAACCGTATTGCATATTGTGTTGTGCTaGATGCCTTTAATCCCAGAACTTGGGAGGCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: KLKRTVLHIVLC*MPLIPELGRQK Trigger: CTTCTGCCTCCCAAGTTCTGGGATTAAAGGCATGCAGCACAACACAATATGCAATACGGTTCTTTTTAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR GCA 72 bp | ACTAAATTAAAAAGAACCGTATTGCATATTGTGTTGTaGTGCATGCCTTTAATCCCAGAACTTGGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: TKLKRTVLHIVL*CMPLIPELGRQ Trigger: CTGCCTCCCAAGTTCTGGGATTAAAGGCATGCAGCACAACACAATATGCAATACGGTTCTTTTTAATTTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR GCA 90 bp | TCATTTGGGTTTTCTTGGCAGCTACAAGCAACTTCCAAACCAAGAGATGGGGTCACGCTAGAATGGGCGTaGCCAGGGAGGAGAGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SFGFSWQLQATSKPRDGVTLEWA*PGRRVS Trigger: GCTGACTCTCCTCCCTGGGCACGCCCATTCTAGCGT...GACCCCATCTCTTGGTTTGGAAGTTGCTTGTAGCTGCCAAGAAAACCCAAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR GCA 90 bp | TTAATCCCAGAACTTGGGAGGCAGAAGCAGGTGGATCTCTATGAGTTCAAGGCCACTCCTTCATACTTGTaGCCTGTCGGAGTGGTCACC | + |
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Preference number: 4 (lower is better) Translates to: LIPELGRQKQVDLYEFKATPSYL*PVGVVT Trigger: GGTGACCACTCCGACAGGGCACAAGTATGAAGGAGT...GGCCTTGAACTCATAGAGATCCACCTGCTTCTGCCTCCCAAGTTCTGGGATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR CCA 90 bp | TTAATCCCAGAACTTGGGAGGCAGAAGCAGGTGGATCTCTATGAGTTCAAGGCCGATTGTGACAGGGCATaGAGTCCGGACGCTGTAACT | + |
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Preference number: 4 (lower is better) Translates to: LIPELGRQKQVDLYEFKADCDRA*SPDAVT Trigger: AGTTACAGCGTCCGGACTCCATGCCCTGTCACAATC...GGCCTTGAACTCATAGAGATCCACCTGCTTCTGCCTCCCAAGTTCTGGGATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR TCA 90 bp | TCACCATGTTACAGCTTGGTAAGTACCTTCCCTCAATTCCCACTTGGGGAAATGTTTACTTGCCGATTGTaGCAGGGCATGGAGTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: SPCYSLVSTFPQFPLGEMFTCRL*QGMESG Trigger: TCCGGACTCCATGCCCTGTCACAATCGGCAAGTAAA...CATTTCCCCAAGTGGGAATTGAGGGAAGGTACTTACCAAGCTGTAACATGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR CCA 90 bp | CCATGTTACAGCTTGGTAAGTACCTTCCCTCAATTCCCACTTGGGGAAATGAGCTCTTCCCAATCCGTATaGATCGACAGCAGTCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: PCYSLVSTFPQFPLGEMSSSQSV*IDSSLA Trigger: TGCGAGACTGCTGTCGATCCATACGGATTGGGAAGA...GCTCATTTCCCCAAGTGGGAATTGAGGGAAGGTACTTACCAAGCTGTAACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR TCA 90 bp | TCACCATGTTACAGCTTGGTAAGTACCTTCCCTCAATTCCCACTTGGGGAAATGGATCTGCAGAAAACATaGAGTCCCCTCTACTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SPCYSLVSTFPQFPLGEMDLQKT*SPLYWL Trigger: CAGCCAGTAGAGGGGACTTCATGTTTTCTGCAGATC...CATTTCCCCAAGTGGGAATTGAGGGAAGGTACTTACCAAGCTGTAACATGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR TCA 90 bp | CCATGTTACAGCTTGGTAAGTACCTTCCCTCAATTCCCACTTGGGGAAATGAGCGTCTCCTCATCACTCTaGATCAGGATCTTCCCAATC | + |
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Preference number: 4 (lower is better) Translates to: PCYSLVSTFPQFPLGEMSVSSSL*IRIFPI Trigger: GATTGGGAAGATCCTGATTCAGAGTGATGAGGAGAC...GCTCATTTCCCCAAGTGGGAATTGAGGGAAGGTACTTACCAAGCTGTAACATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR GCA 90 bp | TCACCATGTTACAGCTTGGTAAGTACCTTCCCTCAATTCCCACTTGGGGAAATGAGCGTTATTTTCCTCTaGATGATCCAGGACCCGGTC | + |
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Preference number: 4 (lower is better) Translates to: SPCYSLVSTFPQFPLGEMSVIFL*MIQDPV Trigger: GACCGGGTCCTGGATCATGCAGAGGAAAATAACGCT...CATTTCCCCAAGTGGGAATTGAGGGAAGGTACTTACCAAGCTGTAACATGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR CCA 90 bp | TCATTTGGGTTTTCTTGGCAGCTACAAGCAACTTCCAAACCAAGAGATGGGGTCTCTGCGATGAATGTCTaGGGGGAACTTGGCATAATA | + |
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Preference number: 4 (lower is better) Translates to: SFGFSWQLQATSKPRDGVSAMNV*GELGII Trigger: TATTATGCCAAGTTCCCCCCAGACATTCATCGCAGA...GACCCCATCTCTTGGTTTGGAAGTTGCTTGTAGCTGCCAAGAAAACCCAAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR TCA 90 bp | AGTGAGTTCCAGGACAGCCCGAGGAACACAGAGAAACCCTACCTTGAAAAACAAAAATTCTTGAATGATTaGTTTGGCACCATGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SEFQDSPRNTEKPYLEKQKFLND*FGTMWG Trigger: ACCCCACATGGTGCCAAATCAATCATTCAAGAATTT...TTGTTTTTCAAGGTAGGGTTTCTCTGTGTTCCTCGGGCTGTCCTGGAACTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR TCA 90 bp | AGTGAGTTCCAGGACAGCCCGAGGAACACAGAGAAACCCTACCTTGAAAAACAACAGTATTTCCAGTACTaGGAATTGGATACATCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SEFQDSPRNTEKPYLEKQQYFQY*ELDTSE Trigger: TTCTGATGTATCCAATTCTCAGTACTGGAAATACTG...TTGTTTTTCAAGGTAGGGTTTCTCTGTGTTCCTCGGGCTGTCCTGGAACTCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR TCA 90 bp | CCATGTTACAGCTTGGTAAGTACCTTCCCTCAATTCCCACTTGGGGAAATGAGCATCTCTGGAAATTCTTaGATGATTGATTTGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: PCYSLVSTFPQFPLGEMSISGNS*MIDLAP Trigger: TGGTGCCAAATCAATCATTCAAGAATTTCCAGAGAT...GCTCATTTCCCCAAGTGGGAATTGAGGGAAGGTACTTACCAAGCTGTAACATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR GCA 90 bp | AACATAAAATTCCGGGATATACTCTCATTCTCTCTTCTTCAAGGTACCTGCATGCAGGTGCATCGTAGTTaGCACTGTCACTACTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: NIKFRDILSFSLLQGTCMQVHRS*HCHYCH Trigger: GTGACAGTAGTGACAGTGGCAACTACGATGCACCTG...CATGCAGGTACCTTGAAGAAGAGAGAATGAGAGTATATCCCGGAATTTTATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR CCA 90 bp | TGGTTTAGTCTCTGTAGACTCATGTTACAGATTCAGTTACTGAAAAGACCCTGCCAGATGCTCGGGACTTaGGCTAGAAGTAGAGTTTAC | + |
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Preference number: 4 (lower is better) Translates to: WFSLCRLMLQIQLLKRPCQMLGT*ARSRVY Trigger: GTAAACTCTACTTCTAGCCCAAGTCCCGAGCATCTG...GCAGGGTCTTTTCAGTAACTGAATCTGTAACATGAGTCTACAGAGACTAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR CAA 72 bp | CAGTGTACCAAAGAACTAACTCTCATTTGGGTTTTCTaGGCAGCTACAAGCAACTTCCAAACCAAGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: QCTKELTLIWVF*AATSNFQTKRW Trigger: CCATCTCTTGGTTTGGAAGTTGCTTGTAGCTGCCAAGAAAACCCAAATGAGAGTTAGTTCTTTGGTACACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR GCA 90 bp | CATAAAATTCCGGGATATACTCTCATTCTCTCTTCTTCAAGGTACCTGCATGTGTCTGATCAAGCGATCTaGAGAAAACATGAAGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: HKIPGYTLILSSSRYLHVSDQAI*RKHEVP Trigger: GGGGACTTCATGTTTTCTGCAGATCGCTTGATCAGA...CACATGCAGGTACCTTGAAGAAGAGAGAATGAGAGTATATCCCGGAATTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR CCA 90 bp | TCACCATGTTACAGCTTGGTAAGTACCTTCCCTCAATTCCCACTTGGGGAAATGGTAGGTGCAACAGGATaGACTTCTGTAGTTAAAATT | + |
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Preference number: 4 (lower is better) Translates to: SPCYSLVSTFPQFPLGEMVGATG*TSVVKI Trigger: AATTTTAACTACAGAAGTCCATCCTGTTGCACCTAC...CATTTCCCCAAGTGGGAATTGAGGGAAGGTACTTACCAAGCTGTAACATGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| 3UTR CAA 72 bp | TGTAAACCTGCAGTGTACCAAAGAACTAACTCTCATTaGGGTTTTCTTGGCAGCTACAAGCAACTTCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: CKPAVYQRTNSH*GFLGSYKQLPN Trigger: GTTTGGAAGTTGCTTGTAGCTGCCAAGAAAACCCAAATGAGAGTTAGTTCTTTGGTACACTGCAGGTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR TCA 90 bp | AGTCTCCATGGACTAACTGAAGAGTCAGTGACTTCTATTAGCATACAATTAAAACTGTGGTTCTCAGAGTaGAGATTAGTGCTGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLHGLTEESVTSISIQLKLWFSE*RLVLQQ Trigger: CTGCTGCAGCACTAATCTTCACTCTGAGAACCACAG...TTTTAATTGTATGCTAATAGAAGTCACTGACTCTTCAGTTAGTCCATGGAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR TCA 90 bp | TCTTGGGCCTGCAAATTAAGTGAGGACATAAATGGCAACATAAAATTCCGGGATCACTTCTCATTATGCTaGCCCCACAATTTCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SWACKLSEDINGNIKFRDHFSLC*PHNFLS Trigger: AGAAAGGAAATTGTGGGGTCAGCATAATGAGAAGTG...ATCCCGGAATTTTATGTTGCCATTTATGTCCTCACTTAATTTGCAGGCCCAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR TCA 90 bp | AACATAAAATTCCGGGATATACTCTCATTCTCTCTTCTTCAAGGTACCTGCATGTCTTTATATGGCAGCTaGTTCAGTCCCTCTTCTACA | + |
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Preference number: 4 (lower is better) Translates to: NIKFRDILSFSLLQGTCMSLYGS*FSPSST Trigger: TGTAGAAGAGGGACTGAATCAGCTGCCATATAAAGA...CATGCAGGTACCTTGAAGAAGAGAGAATGAGAGTATATCCCGGAATTTTATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR GCA 90 bp | AACATAAAATTCCGGGATATACTCTCATTCTCTCTTCTTCAAGGTACCTGCATGTCCAAAATGTGTAGGTaGAACAGGATGGACTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: NIKFRDILSFSLLQGTCMSKMCR*NRMDFC Trigger: ACAGAAGTCCATCCTGTTGCACCTACACATTTTGGA...CATGCAGGTACCTTGAAGAAGAGAGAATGAGAGTATATCCCGGAATTTTATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR CCA 90 bp | AACATAAAATTCCGGGATATACTCTCATTCTCTCTTCTTCAAGGTACCTGCATGTCCAGTACTGAGAATTaGATACATCAGAAGGACTTT | + |
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Preference number: 4 (lower is better) Translates to: NIKFRDILSFSLLQGTCMSSTEN*IHQKDF Trigger: AAAGTCCTTCTGATGTATCCAATTCTCAGTACTGGA...CATGCAGGTACCTTGAAGAAGAGAGAATGAGAGTATATCCCGGAATTTTATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS GCA 90 bp | CAGCAGGCCGGAGAGTCCCGCTCCGAAAGCACGCTAGAATGGGCGTaGCCAGGGAGGAGAGTCAGCTTAGCCATAGCAGCGTTATTTTCC | + |
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Preference number: 5 (lower is better) Translates to: QQAGESRSESTLEWA*PGRRVSLAIAALFS Trigger: GGAAAATAACGCTGCTATGGCTAAGCTGACTCTCCTCCCTGGGCACGCCCATTCTAGCGTGCTTTCGGAGCGGGACTCTCCGGCCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS TCA 90 bp | GGGAGGAGAGTCAGCTTAGCCATAGCAGCGTTATTTTCCTCTGCATaGTCCAGGACCCGGTCCTCGGCTAGCAGATGCTCGGGACTTGGG | + |
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Preference number: 5 (lower is better) Translates to: GRRVSLAIAALFSSA*SRTRSSASRCSGLG Trigger: CCCAAGTCCCGAGCATCTGCTAGCCGAGGACCGGGTCCTGGATCATGCAGAGGAAAATAACGCTGCTATGGCTAAGCTGACTCTCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR CAA 90 bp | TTAATCCCAGAACTTGGGAGGCAGAAGCAGGTGGATCTCTATGAGTTCAAGGCCTTCACTCCTTCATACTaGTGCCCTGTCGGAGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: LIPELGRQKQVDLYEFKAFTPSY*CPVGVV Trigger: GACCACTCCGACAGGGCACAAGTATGAAGGAGTGAA...GGCCTTGAACTCATAGAGATCCACCTGCTTCTGCCTCCCAAGTTCTGGGATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS CCA 90 bp | TTTGTGTCTCCTCATCACTCTGAATCAGGATCTTCCCAATCCGTATaGATCGACAGCAGTCTCGCAAACCTTGTTCCATTGCCTCACCAC | + |
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Preference number: 5 (lower is better) Translates to: FVSPHHSESGSSQSV*IDSSLANLVPLPHH Trigger: GTGGTGAGGCAATGGAACAAGGTTTGCGAGACTGCTGTCGATCCATACGGATTGGGAAGATCCTGATTCAGAGTGATGAGGAGACACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR CAA 90 bp | TCACCATGTTACAGCTTGGTAAGTACCTTCCCTCAATTCCCACTTGGGGAAATGGCAGTCTCGCAAACCTaGTTCCATTGCCTCACCACT | + |
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Preference number: 5 (lower is better) Translates to: SPCYSLVSTFPQFPLGEMAVSQT*FHCLTT Trigger: AGTGGTGAGGCAATGGAACAAGGTTTGCGAGACTGC...CATTTCCCCAAGTGGGAATTGAGGGAAGGTACTTACCAAGCTGTAACATGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS CCA 90 bp | ACTGAGAATTGGATACATCAGAAGGACTTTTCTGCGATGAATGTCTaGGGGGAACTTGGCATAATATACTTTGGCCCTTTGTGTCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: TENWIHQKDFSAMNV*GELGIIYFGPLCLL Trigger: GAGGAGACACAAAGGGCCAAAGTATATTATGCCAAGTTCCCCCCAGACATTCATCGCAGAAAAGTCCTTCTGATGTATCCAATTCTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR CAA 90 bp | GTGTACCAAAGAACTAACTCTCATTTGGGTTTTCTTGGCAGCTACAAGCAACTTAGAAGTAGAGTTTACTaGCCGATTGTGACAGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: VYQRTNSHLGFLGSYKQLRSRVY*PIVTGH Trigger: ATGCCCTGTCACAATCGGCAAGTAAACTCTACTTCT...AAGTTGCTTGTAGCTGCCAAGAAAACCCAAATGAGAGTTAGTTCTTTGGTACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR CAA 90 bp | TCTTGGGCCTGCAAATTAAGTGAGGACATAAATGGCAACATAAAATTCCGGGATGCAAACCTTGTTCCATaGCCTCACCACTTCTCATTA | + |
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Preference number: 5 (lower is better) Translates to: SWACKLSEDINGNIKFRDANLVP*PHHFSL Trigger: TAATGAGAAGTGGTGAGGCAATGGAACAAGGTTTGC...ATCCCGGAATTTTATGTTGCCATTTATGTCCTCACTTAATTTGCAGGCCCAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS-3UTR CAA 90 bp | TCTTGGGCCTGCAAATTAAGTGAGGACATAAATGGCAACATAAAATTCCGGGATGATAATAACACTGGGTaGAACACCATGTTCTATAAG | + |
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Preference number: 5 (lower is better) Translates to: SWACKLSEDINGNIKFRDDNNTG*NTMFYK Trigger: CTTATAGAACATGGTGTTCAACCCAGTGTTATTATC...ATCCCGGAATTTTATGTTGCCATTTATGTCCTCACTTAATTTGCAGGCCCAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS GCA 72 bp | CTAGCAGGGAGTCGCCGCCGACAGGTGCATCGTAGTTaGCACTGTCACTACTGTCACTGTGGTTCTCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: LAGSRRRQVHRS*HCHYCHCGSQS Trigger: ACTCTGAGAACCACAGTGACAGTAGTGACAGTGGCAACTACGATGCACCTGTCGGCGGCGACTCCCTGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS TCA 72 bp | TTGCCACTGTCACTACTGTCACTGTGGTTCTCAGAGTaGAGATTAGTGCTGCAGCAGGCCGGAGAGTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: LPLSLLSLWFSE*RLVLQQAGESR Trigger: GCGGGACTCTCCGGCCTGCTGCAGCACTAATCTTCACTCTGAGAACCACAGTGACAGTAGTGACAGTGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS CAA 72 bp | CAGATGCTCGGGACTTGGGCTAGAAGTAGAGTTTACTaGCCGATTGTGACAGGGCATGGAGTCCGGACGCTG | + |
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Preference number: 6 (lower is better) Translates to: QMLGTWARSRVY*PIVTGHGVRTL Trigger: CAGCGTCCGGACTCCATGCCCTGTCACAATCGGCAAGTAAACTCTACTTCTAGCCCAAGTCCCGAGCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS TCA 72 bp | GGACTTGGGCTAGAAGTAGAGTTTACTTGCCGATTGTaGCAGGGCATGGAGTCCGGACGCTGTAACTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: GLGLEVEFTCRL*QGMESGRCNSE Trigger: CTCGGAGTTACAGCGTCCGGACTCCATGCCCTGTCACAATCGGCAAGTAAACTCTACTTCTAGCCCAAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS CAA 72 bp | CCCAATCCGTATGGATCGACAGCAGTCTCGCAAACCTaGTTCCATTGCCTCACCACTTCTCATTATGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: PNPYGSTAVSQT*FHCLTTSHYAD Trigger: GTCAGCATAATGAGAAGTGGTGAGGCAATGGAACAAGGTTTGCGAGACTGCTGTCGATCCATACGGATTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS CCA 72 bp | CCTCATCACTCTGAATCAGGATCTTCCCAATCCGTATaGATCGACAGCAGTCTCGCAAACCTTGTTCCATTG | + |
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Preference number: 6 (lower is better) Translates to: PHHSESGSSQSV*IDSSLANLVPL Trigger: CAATGGAACAAGGTTTGCGAGACTGCTGTCGATCCATACGGATTGGGAAGATCCTGATTCAGAGTGATGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS CCA 72 bp | GTGCCCTGTCGGAGTGGTCACCATACATTCTTTATATaGCAGCTGATTCAGTCCCTCTTCTACAACAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: VPCRSGHHTFFI*QLIQSLFYNKS Trigger: AGACTTGTTGTAGAAGAGGGACTGAATCAGCTGCCATATAAAGAATGTATGGTGACCACTCCGACAGGGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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| CDS CCA 72 bp | TGGATACATCAGAAGGACTTTTCTGCGATGAATGTCTaGGGGGAACTTGGCATAATATACTTTGGCCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: WIHQKDFSAMNV*GELGIIYFGPL Trigger: CAAAGGGCCAAAGTATATTATGCCAAGTTCCCCCCAGACATTCATCGCAGAAAAGTCCTTCTGATGTATCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087867.6 |
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