Pregenerated sensors for UPP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026839Ensembl transcript IDs: ENSMUST00000059102.13, ENSMUST00000071543.12, ENSMUST00000102755.4, ENSMUST00000229923.2, ENSMUST00000230627.2
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCCAGCTGTGCTTTACCACAGACCAGCCCACTCTCAACGAGTCCTaGTGTGTTGGTCCGAGTGAGGCCTCAGGCAGTGTTTTGGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: SQLCFTTDQPTLNES*CVGPSEASGSVLGK Trigger: CTTTCCCAAAACACTGCCTGAGGCCTCACTCGGACCAACACAGCAGGACTCGTTGAGAGTGGGCTGGTCTGTGGTAAAGCACAGCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR GCA 90 bp | GTTCAGCTGGAGGGGCACCCGCAGGACACGTTCTTCTCAATCAACTaGTGTCTTCCCAGCTGTGCTTTACCACAGACCAGCCCACTCTCA | + |
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Preference number: 1 (lower is better) Translates to: VQLEGHPQDTFFSIN*CLPSCALPQTSPLS Trigger: TGAGAGTGGGCTGGTCTGTGGTAAAGCACAGCTGGGAAGACAGCAGTTGATTGAGAAGAACGTGTCCTGCGGGTGCCCCTCCAGCTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR GCA 90 bp | CCCGCAGGACACGTTCTTCTCAATCAACTGCTGTCTTCCCAGCTGTaGTTTACCACAGACCAGCCCACTCTCAACGAGTCCTGCTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: PAGHVLLNQLLSSQL*FTTDQPTLNESCCV Trigger: AACACAGCAGGACTCGTTGAGAGTGGGCTGGTCTGTGGTAAAGCACAGCTGGGAAGACAGCAGTTGATTGAGAAGAACGTGTCCTGCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR TCA 90 bp | GCTGTGGCCGTTGCTGGTACTCCACCAGGACATCATGGGACAAATTaGTTTGGTCACTCTCGAGTCTGTCAAGAAGTGTCACACAGACCA | + |
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Preference number: 1 (lower is better) Translates to: AVAVAGTPPGHHGTN*FGHSRVCQEVSHRP Trigger: TGGTCTGTGTGACACTTCTTGACAGACTCGAGAGTGACCAAATCAATTTGTCCCATGATGTCCTGGTGGAGTACCAGCAACGGCCACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
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| 3UTR CCA 90 bp | GGCCGTTGCTGGTACTCCACCAGGACATCATGGGACAAATTGATTTaGTCACTCTCGAGTCTGTCAAGAAGTGTCACACAGACCACAGCA | + |
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Preference number: 1 (lower is better) Translates to: GRCWYSTRTSWDKLI*SLSSLSRSVTQTTA Trigger: TGCTGTGGTCTGTGTGACACTTCTTGACAGACTCGAGAGTGACCAAATCAATTTGTCCCATGATGTCCTGGTGGAGTACCAGCAACGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
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| 3UTR CCA 90 bp | GAGATTAGAAGCTGTGGCCGTTGCTGGTACTCCACCAGGACATCATaGGACAAATTGATTTGGTCACTCTCGAGTCTGTCAAGAAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: EIRSCGRCWYSTRTS*DKLIWSLSSLSRSV Trigger: GACACTTCTTGACAGACTCGAGAGTGACCAAATCAATTTGTCCCATGATGTCCTGGTGGAGTACCAGCAACGGCCACAGCTTCTAATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
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| 3UTR GCA 90 bp | GGCAGATGTAATCCTTGCCCTCCAGAATCTTACTGCCAAGGCATTTaGCATCCATTAAAGAGTGACCCAAATCATAACAAACCTCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: GRCNPCPPESYCQGI*HPLKSDPNHNKPQV Trigger: AACTTGAGGTTTGTTATGATTTGGGTCACTCTTTAATGGATGGCAAATGCCTTGGCAGTAAGATTCTGGAGGGCAAGGATTACATCTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR GCA 90 bp | AGCAGTGAATATGGCAGATGTAATCCTTGCCCTCCAGAATCTTACTaGCAAGGCATTTGCCATCCATTAAAGAGTGACCCAAATCATAAC | + |
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Preference number: 1 (lower is better) Translates to: SSEYGRCNPCPPESY*QGICHPLKSDPNHN Trigger: GTTATGATTTGGGTCACTCTTTAATGGATGGCAAATGCCTTGGCAGTAAGATTCTGGAGGGCAAGGATTACATCTGCCATATTCACTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR-3UTR TCA 90 bp | AAGCAAGGCTGTGTGGGATCCACTGGAGCCTCAGGAGGAAGGGAACACTGGGCTAGCAGGAGCAGGAGATaGAGTAGGAGCCATCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: KQGCVGSTGASGGREHWASRSRR*SRSHPP Trigger: AGGCGGATGGCTCCTACTTCATCTCCTGCTCCTGCT...AGCCCAGTGTTCCCTTCCTCCTGAGGCTCCAGTGGATCCCACACAGCCTTGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR-3UTR CCA 90 bp | AGGCATTTAGCAGTTCAGCTGGAGGGGCACCCGCAGGACACGTTCTTCTCAATCGAAAGCAAGGCTGTGTaGGATCCACTGGAGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: RHLAVQLEGHPQDTFFSIESKAV*DPLEPQ Trigger: CTGAGGCTCCAGTGGATCCCACACAGCCTTGCTTTC...GATTGAGAAGAACGTGTCCTGCGGGTGCCCCTCCAGCTGAACTGCTAAATGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR-3UTR TCA 90 bp | GTGGAGAATGGTTCAAAGGCATTTAGCAGTTCAGCTGGAGGGGCACCCGCAGGAAAACGGGGAACCGATTaGAGAGGGATGCAGAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: VENGSKAFSSSAGGAPAGKRGTD*RGMQKS Trigger: ACTCTTCTGCATCCCTCTTCAATCGGTTCCCCGTTT...TCCTGCGGGTGCCCCTCCAGCTGAACTGCTAAATGCCTTTGAACCATTCTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR-3UTR TCA 90 bp | GTGGAGAATGGTTCAAAGGCATTTAGCAGTTCAGCTGGAGGGGCACCCGCAGGACCTAGAGCTCTCAGTTaGACTTCCAGAATAGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: VENGSKAFSSSAGGAPAGPRALS*TSRIEA Trigger: CGCCTCTATTCTGGAAGTTCAACTGAGAGCTCTAGG...TCCTGCGGGTGCCCCTCCAGCTGAACTGCTAAATGCCTTTGAACCATTCTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGGGGCACCCGCAGGACACGTTCTTCTCAATCAACTGCTGTCTTCCCAGCTTTTGGGAAAGTTTTTaGCAGACCCTAATATGCCCC | + |
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Preference number: 2 (lower is better) Translates to: LEGHPQDTFFSINCCLPSFWESF*QTLICP Trigger: GGGGCATATTAGGGTCTGTCAAAAACTTTCCCAAAA...GCTGGGAAGACAGCAGTTGATTGAGAAGAACGTGTCCTGCGGGTGCCCCTCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR-3UTR GCA 90 bp | GTGGAGAATGGTTCAAAGGCATTTAGCAGTTCAGCTGGAGGGGCACCCGCAGGACCTCCAGAATCTTACTaGCAAGGCATTTGCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: VENGSKAFSSSAGGAPAGPPESY*QGICHP Trigger: TGGATGGCAAATGCCTTGGCAGTAAGATTCTGGAGG...TCCTGCGGGTGCCCCTCCAGCTGAACTGCTAAATGCCTTTGAACCATTCTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR-3UTR CCA 90 bp | AACGAGTCCTGCTGTGTTGGTCCGAGTGAGGCCTCAGGCAGTGTTTTGGGAAAGCTGCTCTTTGACGGATaGAATGAGGAAGACAGACTC | + |
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Preference number: 2 (lower is better) Translates to: NESCCVGPSEASGSVLGKLLFDG*NEEDRL Trigger: GAGTCTGTCTTCCTCATTCCATCCGTCAAAGAGCAG...CTTTCCCAAAACACTGCCTGAGGCCTCACTCGGACCAACACAGCAGGACTCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR CAA 90 bp | TGGCCGTTGCTGGTACTCCACCAGGACATCATGGGACAAATTGATTaGGTCACTCTCGAGTCTGTCAAGAAGTGTCACACAGACCACAGC | + |
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Preference number: 2 (lower is better) Translates to: WPLLVLHQDIMGQID*VTLESVKKCHTDHS Trigger: GCTGTGGTCTGTGTGACACTTCTTGACAGACTCGAGAGTGACCAAATCAATTTGTCCCATGATGTCCTGGTGGAGTACCAGCAACGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
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| 3UTR CAA 90 bp | AGCTGTGGCCGTTGCTGGTACTCCACCAGGACATCATGGGACAAATaGATTTGGTCACTCTCGAGTCTGTCAAGAAGTGTCACACAGACC | + |
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Preference number: 2 (lower is better) Translates to: SCGRCWYSTRTSWDK*IWSLSSLSRSVTQT Trigger: GGTCTGTGTGACACTTCTTGACAGACTCGAGAGTGACCAAATCAATTTGTCCCATGATGTCCTGGTGGAGTACCAGCAACGGCCACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGGGGCACCCGCAGGACACGTTCTTCTCAATCAACTGCTGTCTTCCCAGCTACGGTATCTGGACTTaGAATAATGAGGAAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: LEGHPQDTFFSINCCLPSYGIWT*NNEEDR Trigger: TCTGTCTTCCTCATTATTCCAAGTCCAGATACCGTA...GCTGGGAAGACAGCAGTTGATTGAGAAGAACGTGTCCTGCGGGTGCCCCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGATCCACTGGAGCCTCAGGAGGAAGGGAACACTGGGCTCAGATTTAAAGAAGAGTCTATTCATCTaGCTCCTCTGCTCTTTGACG | + |
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Preference number: 2 (lower is better) Translates to: CGIHWSLRRKGTLGSDLKKSLFI*LLCSLT Trigger: CGTCAAAGAGCAGAGGAGTCAGATGAATAGACTCTT...CTTTAAATCTGAGCCCAGTGTTCCCTTCCTCCTGAGGCTCCAGTGGATCCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR-3UTR TCA 90 bp | ATGTTCAAAAGAACCTTGAAGGTGAGATCAACTCCTGGAGCCTCTGCTGCATGCCAATTGAGTCACTTCTaGTTTCTGGGGGAGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: MFKRTLKVRSTPGASAACQLSHF*FLGEGR Trigger: CCTGCCCTCCCCCAGAAATCAGAAGTGACTCAATTG...GCATGCAGCAGAGGCTCCAGGAGTTGATCTCACCTTCAAGGTTCTTTTGAACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCATTTAGCAGTTCAGCTGGAGGGGCACCCGCAGGACACGTTCTTCTCAATCTACTGCCAAGGCATTTaGCATCCATTAAAGAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: RHLAVQLEGHPQDTFFSIYCQGI*HPLKSD Trigger: GTCACTCTTTAATGGATGGCAAATGCCTTGGCAGTA...GATTGAGAAGAACGTGTCCTGCGGGTGCCCCTCCAGCTGAACTGCTAAATGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR-3UTR GCA 90 bp | AAGGCAATTGAGTCACTTCTGATTTCTGGGGGAGGGCAGGGAATAAAGGTCTTTAGAAGCTGTGGCCGTTaGTGGTACTCCACCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: KAIESLLISGGGQGIKVFRSCGR*WYSTRT Trigger: TGTCCTGGTGGAGTACCAGCAACGGCCACAGCTTCT...AAAGACCTTTATTCCCTGCCCTCCCCCAGAAATCAGAAGTGACTCAATTGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
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| 3UTR-3UTR CCA 90 bp | CATCCAGCCTTACTATGCACCAGTCAGCAGCTAGAATATAAAGAGATTCAGATACTGTGTGGGATCCACTaGAGCCTCAGGAGGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: HPALLCTSQQLEYKEIQILCGIH*SLRRKG Trigger: TCCCTTCCTCCTGAGGCTCCAGTGGATCCCACACAG...TATCTGAATCTCTTTATATTCTAGCTGCTGACTGGTGCATAGTAAGGCTGGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR-3UTR CCA 90 bp | GGGAGTCTGAGGTGCAGGCCTAGAATGAGACCTACCCCAAAGTTAAACAGAAGGTCCACCAGGACATCATaGGACAAATTGATTTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: GSLRCRPRMRPTPKLNRRSTRTS*DKLIWS Trigger: TGACCAAATCAATTTGTCCCATGATGTCCTGGTGGA...CCTTCTGTTTAACTTTGGGGTAGGTCTCATTCTAGGCCTGCACCTCAGACTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
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| 3UTR-3UTR TCA 90 bp | GAATTACATAAGAATGTTATGAACAACACATGGCTCCATCGTTGCAGCTCTGTGCGGGATTCGGAGTTATaGCATCTGGTCACAAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: ELHKNVMNNTWLHRCSSVRDSEL*HLVTKS Trigger: GGACTTTGTGACCAGATGTCATAACTCCGAATCCCG...CACAGAGCTGCAACGATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
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| 3UTR-3UTR CCA 90 bp | TATACATATTTGCAAAACCTCCTCCACTCTTACCCCAACCAGACTCTCCAATTTACAGGAGGAAAGGGATaGCCATATTTCCCCGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: YTYLQNLLHSYPNQTLQFTGGKG*PYFPED Trigger: ATCCTCGGGGAAATATGGCCATCCCTTTCCTCCTGT...AAATTGGAGAGTCTGGTTGGGGTAAGAGTGGAGGAGGTTTTGCAAATATGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGCAATTGAGTCACTTCTGATTTCTGGGGGAGGGCAGGGAATAAAGGTCTTTGGGAATAAAGGTCTTTaGATGACCAATGGTTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: KAIESLLISGGGQGIKVFGNKGL*MTNGFH Trigger: ATGAAAACCATTGGTCATGCAAAGACCTTTATTCCC...AAAGACCTTTATTCCCTGCCCTCCCCCAGAAATCAGAAGTGACTCAATTGCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTGGATCTGCTTCAGCAAGCAACTGGTAACCATCTACAAATGGCTGATTTTGTACATAAGAATGTTATaGACAACACATGGCTCCATC | + |
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Preference number: 2 (lower is better) Translates to: FWICFSKQLVTIYKWLILYIRML*TTHGSI Trigger: GATGGAGCCATGTGTTGTTCATAACATTCTTATGTA...CAAAATCAGCCATTTGTAGATGGTTACCAGTTGCTTGCTGAAGCAGATCCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
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| 3UTR-3UTR TCA 90 bp | TACTATACATATTTGCAAAACCTCCTCCACTCTTACCCCAACCAGACTCTCCAATACATAAGAATGTTATaGACAACACATGGCTCCATC | + |
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Preference number: 2 (lower is better) Translates to: YYTYLQNLLHSYPNQTLQYIRML*TTHGSI Trigger: GATGGAGCCATGTGTTGTTCATAACATTCTTATGTA...TTGGAGAGTCTGGTTGGGGTAAGAGTGGAGGAGGTTTTGCAAATATGTATAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCCCGAGGATAATTCTTCCATACCAGCCTATATTACACTGGCACATTTTTGTTACATAAGAATGTTATaGACAACACATGGCTCCATC | + |
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Preference number: 2 (lower is better) Translates to: FPEDNSSIPAYITLAHFCYIRML*TTHGSI Trigger: GATGGAGCCATGTGTTGTTCATAACATTCTTATGTA...ACAAAAATGTGCCAGTGTAATATAGGCTGGTATGGAAGAATTATCCTCGGGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
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| 3UTR-3UTR TCA 90 bp | GAATTACATAAGAATGTTATGAACAACACATGGCTCCATCGTTGCAGCTCTGTGTACATAAGAATGTTATaGACAACACATGGCTCCATC | + |
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Preference number: 2 (lower is better) Translates to: ELHKNVMNNTWLHRCSSVYIRML*TTHGSI Trigger: GATGGAGCCATGTGTTGTTCATAACATTCTTATGTA...CACAGAGCTGCAACGATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
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| 3UTR-3UTR TCA 90 bp | TACACACACAACATTACATACTATACATATTTGCAAAACCTCCTCCACTCTTACTGTGATCTCAAACTGTaGTGTTCTGTGATTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: YTHNITYYTYLQNLLHSYCDLKL*CSVILA Trigger: TGCAAGAATCACAGAACATCACAGTTTGAGATCACA...GTAAGAGTGGAGGAGGTTTTGCAAATATGTATAGTATGTAATGTTGTGTGTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
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| 3UTR CCA 72 bp | GGGGCACGGAGGAAAGCAAGGCTGTGTGGGATCCACTaGAGCCTCAGGAGGAAGGGAACACTGGGCTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: GARRKARLCGIH*SLRRKGTLGSD Trigger: ATCTGAGCCCAGTGTTCCCTTCCTCCTGAGGCTCCAGTGGATCCCACACAGCCTTGCTTTCCTCCGTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR GCA 72 bp | AACCTTGAAGGTGAGATCAACTCCTGGAGCCTCTGCTaGATGCGAGTTCAACCAGGGGAGTCTGAGGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: NLEGEINSWSLC*MRVQPGESEVQ Trigger: CTGCACCTCAGACTCCCCTGGTTGAACTCGCATGCAGCAGAGGCTCCAGGAGTTGATCTCACCTTCAAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
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| 3UTR GCA 72 bp | CACGTTCTTCTCAATCAACTGCTGTCTTCCCAGCTGTaGTTTACCACAGACCAGCCCACTCTCAACGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: HVLLNQLLSSQL*FTTDQPTLNES Trigger: GGACTCGTTGAGAGTGGGCTGGTCTGTGGTAAAGCACAGCTGGGAAGACAGCAGTTGATTGAGAAGAACGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR GCA 72 bp | TCTGCTGCATGCGAGTTCAACCAGGGGAGTCTGAGGTaGAGGCCTAGAATGAGACCTACCCCAAAGTTAAAC | + |
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Preference number: 3 (lower is better) Translates to: SAACEFNQGSLR*RPRMRPTPKLN Trigger: GTTTAACTTTGGGGTAGGTCTCATTCTAGGCCTGCACCTCAGACTCCCCTGGTTGAACTCGCATGCAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
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| 3UTR CCA 72 bp | AGCTGTGGCCGTTGCTGGTACTCCACCAGGACATCATaGGACAAATTGATTTGGTCACTCTCGAGTCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: SCGRCWYSTRTS*DKLIWSLSSLS Trigger: TGACAGACTCGAGAGTGACCAAATCAATTTGTCCCATGATGTCCTGGTGGAGTACCAGCAACGGCCACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
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| 3UTR CCA 72 bp | AATGTTCAAAAGAACCTTGAAGGTGAGATCAACTCCTaGAGCCTCTGCTGCATGCGAGTTCAACCAGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: NVQKNLEGEINS*SLCCMRVQPGE Trigger: CTCCCCTGGTTGAACTCGCATGCAGCAGAGGCTCCAGGAGTTGATCTCACCTTCAAGGTTCTTTTGAACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
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| 3UTR GCA 72 bp | GAGGAAGACAGAAACGGGGAACCGATTGAAGAGGGATaGAGAAGAGTCTATTCATCTGACTCCTCTGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: EEDRNGEPIEEG*RRVYSSDSSAL Trigger: AAGAGCAGAGGAGTCAGATGAATAGACTCTTCTGCATCCCTCTTCAATCGGTTCCCCGTTTCTGTCTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR-3UTR CAA 90 bp | TTACAGGAAGAGTTTGTAAGGGAAGTGCTCTGCAGACATGCATTCCTCATTCGAGAAACGGGGAACCGATaGAAGAGGGATGCAGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: LQEEFVREVLCRHAFLIRETGNR*KRDAEE Trigger: CTCTTCTGCATCCCTCTTCAATCGGTTCCCCGTTTC...TCGAATGAGGAATGCATGTCTGCAGAGCACTTCCCTTACAAACTCTTCCTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR TCA 72 bp | GTTGCTGGTACTCCACCAGGACATCATGGGACAAATTaGTTTGGTCACTCTCGAGTCTGTCAAGAAGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: VAGTPPGHHGTN*FGHSRVCQEVS Trigger: TGACACTTCTTGACAGACTCGAGAGTGACCAAATCAATTTGTCCCATGATGTCCTGGTGGAGTACCAGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
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| 3UTR GCA 72 bp | CAGCGTCCTAGAGCAAATCAATCGACACCCAGACCCTaGTCATTCATTACAGGAAGAGTTTGTAAGGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: QRPRANQSTPRP*SFITGRVCKGS Trigger: ACTTCCCTTACAAACTCTTCCTGTAATGAATGAGCAGGGTCTGGGTGTCGATTGATTTGCTCTAGGACGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR CCA 72 bp | TGGTACTCCACCAGGACATCATGGGACAAATTGATTTaGTCACTCTCGAGTCTGTCAAGAAGTGTCACACAG | + |
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Preference number: 3 (lower is better) Translates to: WYSTRTSWDKLI*SLSSLSRSVTQ Trigger: CTGTGTGACACTTCTTGACAGACTCGAGAGTGACCAAATCAATTTGTCCCATGATGTCCTGGTGGAGTACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
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| 3UTR GCA 72 bp | TATGGCAGATGTAATCCTTGCCCTCCAGAATCTTACTaGCAAGGCATTTGCCATCCATTAAAGAGTGACCCA | + |
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Preference number: 3 (lower is better) Translates to: YGRCNPCPPESY*QGICHPLKSDP Trigger: TGGGTCACTCTTTAATGGATGGCAAATGCCTTGGCAGTAAGATTCTGGAGGGCAAGGATTACATCTGCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR CCA 72 bp | GATGTCTACAAGGCAGAAAGTTACGGTATCTGGACTTaGAATAATGAGGAAGACAGAAACGGGGAACCGATT | + |
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Preference number: 3 (lower is better) Translates to: DVYKAESYGIWT*NNEEDRNGEPI Trigger: AATCGGTTCCCCGTTTCTGTCTTCCTCATTATTCCAAGTCCAGATACCGTAACTTTCTGCCTTGTAGACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
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| 3UTR CCA 72 bp | TTGATGAAATTTGAGATTAGAAGCTGTGGCCGTTGCTaGTACTCCACCAGGACATCATGGGACAAATTGATT | + |
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Preference number: 3 (lower is better) Translates to: LMKFEIRSCGRC*YSTRTSWDKLI Trigger: AATCAATTTGTCCCATGATGTCCTGGTGGAGTACCAGCAACGGCCACAGCTTCTAATCTCAAATTTCATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
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| 3UTR GCA 72 bp | AATCCTTGCCCTCCAGAATCTTACTGCCAAGGCATTTaGCATCCATTAAAGAGTGACCCAAATCATAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: NPCPPESYCQGI*HPLKSDPNHNK Trigger: TTTGTTATGATTTGGGTCACTCTTTAATGGATGGCAAATGCCTTGGCAGTAAGATTCTGGAGGGCAAGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| 3UTR GCA 72 bp | TACACACATATATGCTTCATGCATCCAGCCTTACTATaGACCAGTCAGCAGCTAGAATATAAAGAGATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: YTHICFMHPALL*TSQQLEYKEIQ Trigger: CTGAATCTCTTTATATTCTAGCTGCTGACTGGTGCATAGTAAGGCTGGATGCATGAAGCATATATGTGTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| 3UTR-3UTR CAA 90 bp | ATTATTAGACTGCTTTCGTTAACTCGTTCCAAAATGGGATTTGAATTTCGCATGACATCATGGGACAAATaGATTTGGTCACTCTCGAGT | + |
|
Preference number: 3 (lower is better) Translates to: IIRLLSLTRSKMGFEFRMTSWDK*IWSLSS Trigger: ACTCGAGAGTGACCAAATCAATTTGTCCCATGATGT...CATGCGAAATTCAAATCCCATTTTGGAACGAGTTAACGAAAGCAGTCTAATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
||
| 3UTR CAA 72 bp | CCACAGACCAGCCCACTCTCAACGAGTCCTGCTGTGTaGGTCCGAGTGAGGCCTCAGGCAGTGTTTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PQTSPLSTSPAV*VRVRPQAVFWE Trigger: TTCCCAAAACACTGCCTGAGGCCTCACTCGGACCAACACAGCAGGACTCGTTGAGAGTGGGCTGGTCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGGGCACCCGCAGGACACGTTCTTCTCAATCAACTGCTGTCTTCCCAGCTATTACAACGGAGCCTaGTGCAATCCCAATTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LEGHPQDTFFSINCCLPSYYNGA*CNPNSP Trigger: GGGGGAATTGGGATTGCACCAGGCTCCGTTGTAATA...GCTGGGAAGACAGCAGTTGATTGAGAAGAACGTGTCCTGCGGGTGCCCCTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR CCA 90 bp | AAGCAAGGCTGTGTGGGATCCACTGGAGCCTCAGGAGGAAGGGAACACTGGGCTTCACAGCAGTGTGCATaGTGGAGTAATTTGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KQGCVGSTGASGGREHWASQQCA*WSNLMS Trigger: ACTCATCAAATTACTCCACCATGCACACTGCTGTGA...AGCCCAGTGTTCCCTTCCTCCTGAGGCTCCAGTGGATCCCACACAGCCTTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR TCA 90 bp | ACAACCCCTCTAGTGGAGAATGGTTCAAAGGCATTTAGCAGTTCAGCTGGAGGGGCACGGGGCCTGTTTTaGACATGCAGTATCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTPLVENGSKAFSSSAGGARGLF*TCSICL Trigger: CAGACAGATACTGCATGTTCAAAACAGGCCCCGTGC...CCCTCCAGCTGAACTGCTAAATGCCTTTGAACCATTCTCCACTAGAGGGGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR CCA 90 bp | ATGTTCAAAAGAACCTTGAAGGTGAGATCAACTCCTGGAGCCTCTGCTGCATGCGCCTGGTCTGTACTGTaGAATCTCAGTCCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MFKRTLKVRSTPGASAACAWSVL*NLSPAR Trigger: CCTGGCTGGACTGAGATTCCACAGTACAGACCAGGC...GCATGCAGCAGAGGCTCCAGGAGTTGATCTCACCTTCAAGGTTCTTTTGAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059102.13 |
||
| 3UTR CAA 72 bp | TGCTGTGTTGGTCCGAGTGAGGCCTCAGGCAGTGTTTaGGGAAAGTTTTTGACAGACCCTAATATGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CCVGPSEASGSV*GKFLTDPNMPQ Trigger: CTGGGGCATATTAGGGTCTGTCAAAAACTTTCCCAAAACACTGCCTGAGGCCTCACTCGGACCAACACAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR TCA 90 bp | ATGTTCAAAAGAACCTTGAAGGTGAGATCAACTCCTGGAGCCTCTGCTGCATGCGCACGGGGCCTGTTTTaGACATGCAGTATCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MFKRTLKVRSTPGASAACARGLF*TCSICL Trigger: CAGACAGATACTGCATGTTCAAAACAGGCCCCGTGC...GCATGCAGCAGAGGCTCCAGGAGTTGATCTCACCTTCAAGGTTCTTTTGAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
||
| CDS-3UTR CCA 90 bp | CCAGACCCTGCTCATTCATTACAGGAAGAGTTTGTAAGGGAAGTGCTCTGCAGACACACAGGCCACACATaGCTGCGAACACAGTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: PDPAHSLQEEFVREVLCRHTGHT*LRTQSI Trigger: AATCGACTGTGTTCGCAGCCATGTGTGGCCTGTGTG...TCTGCAGAGCACTTCCCTTACAAACTCTTCCTGTAATGAATGAGCAGGGTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR CCA 90 bp | CATACACTTCTGGATCTGCTTCAGCAAGCAACTGGTAACCATCTACAAATGGCTAGCTGTGGCCGTTGCTaGTACTCCACCAGGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: HTLLDLLQQATGNHLQMASCGRC*YSTRTS Trigger: TGATGTCCTGGTGGAGTACCAGCAACGGCCACAGCT...AGCCATTTGTAGATGGTTACCAGTTGCTTGCTGAAGCAGATCCAGAAGTGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 |
||
| 3UTR CAA 72 bp | CGTTGCTGGTACTCCACCAGGACATCATGGGACAAATaGATTTGGTCACTCTCGAGTCTGTCAAGAAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RCWYSTRTSWDK*IWSLSSLSRSV Trigger: GACACTTCTTGACAGACTCGAGAGTGACCAAATCAATTTGTCCCATGATGTCCTGGTGGAGTACCAGCAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
||
| CDS-3UTR GCA 90 bp | TTACAGGAAGAGTTTGTAAGGGAAGTGCTCTGCAGACATGCATTCCTCATTCGACAGGCCACACATGGCTaGGAACACAGTCGATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQEEFVREVLCRHAFLIRQATHG*EHSRFH Trigger: ATGGAATCGACTGTGTTCGCAGCCATGTGTGGCCTG...TCGAATGAGGAATGCATGTCTGCAGAGCACTTCCCTTACAAACTCTTCCTGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGCAGGGAATAAAGGTCTTTGCATGACCAATGGTTTTCATTTGAGAAAAAGAAGCTGTGGCCGTTaGTGGTACTCCACCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GRAGNKGLCMTNGFHLRKRSCGR*WYSTRT Trigger: TGTCCTGGTGGAGTACCAGCAACGGCCACAGCTTCT...TTTTCTCAAATGAAAACCATTGGTCATGCAAAGACCTTTATTCCCTGCCCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059102.13 |
||
| CDS-3UTR CCA 90 bp | AGGCATTTAGCAGTTCAGCTGGAGGGGCACCCGCAGGACACGTTCTTCTCAATCAATTTGATGAGTTCGTaGAGCATAATGGAAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RHLAVQLEGHPQDTFFSINLMSS*SIMEME Trigger: CTCCATTTCCATTATGCTCCACGAACTCATCAAATT...GATTGAGAAGAACGTGTCCTGCGGGTGCCCCTCCAGCTGAACTGCTAAATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR TCA 90 bp | AATATGGCAGATGTAATCCTTGCCCTCCAGAATCTTACTGCCAAGGCATTTGCCCCGGACACTATTTGCTaGCATAGGAACTACTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NMADVILALQNLTAKAFAPDTIC*HRNYSQ Trigger: CTGAGAGTAGTTCCTATGTCAGCAAATAGTGTCCGG...GGCAAATGCCTTGGCAGTAAGATTCTGGAGGGCAAGGATTACATCTGCCATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR GCA 90 bp | TGGCCGTTGCTGGTACTCCACCAGGACATCATGGGACAAATTGATTTGGTCACTCATAAACTGTGCAAATaGCTTCATTCTGTTCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WPLLVLHQDIMGQIDLVTHKLCK*LHSVRA Trigger: AGCCCGAACAGAATGAAGGCATTTGCACAGTTTATG...AGTGACCAAATCAATTTGTCCCATGATGTCCTGGTGGAGTACCAGCAACGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
||
| CDS-3UTR GCA 90 bp | TACTATACATATTTGCAAAACCTCCTCCACTCTTACCCCAACCAGACTCTCCAACAGGCCACACATGGCTaGGAACACAGTCGATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YYTYLQNLLHSYPNQTLQQATHG*EHSRFH Trigger: ATGGAATCGACTGTGTTCGCAGCCATGTGTGGCCTG...TTGGAGAGTCTGGTTGGGGTAAGAGTGGAGGAGGTTTTGCAAATATGTATAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
||
| 3UTR CAA 72 bp | CTGGTACTCCACCAGGACATCATGGGACAAATTGATTaGGTCACTCTCGAGTCTGTCAAGAAGTGTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: LVLHQDIMGQID*VTLESVKKCHT Trigger: TGTGTGACACTTCTTGACAGACTCGAGAGTGACCAAATCAATTTGTCCCATGATGTCCTGGTGGAGTACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
||
| CDS-3UTR TCA 90 bp | GAATTACATAAGAATGTTATGAACAACACATGGCTCCATCGTTGCAGCTCTGTGGCACGGGGCCTGTTTTaGACATGCAGTATCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELHKNVMNNTWLHRCSSVARGLF*TCSICL Trigger: CAGACAGATACTGCATGTTCAAAACAGGCCCCGTGC...CACAGAGCTGCAACGATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGTCTGAGGTGCAGGCCTAGAATGAGACCTACCCCAAAGTTAAACAGAAGGCTTGTGCATAAACTGTaGAAATGCCTTCATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSLRCRPRMRPTPKLNRRLVHKL*KCLHSV Trigger: AACAGAATGAAGGCATTTGCACAGTTTATGCACAAG...CCTTCTGTTTAACTTTGGGGTAGGTCTCATTCTAGGCCTGCACCTCAGACTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
||
| CDS-3UTR GCA 90 bp | TTCCCCGAGGATAATTCTTCCATACCAGCCTATATTACACTGGCACATTTTTGTCAGGCCACACATGGCTaGGAACACAGTCGATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FPEDNSSIPAYITLAHFCQATHG*EHSRFH Trigger: ATGGAATCGACTGTGTTCGCAGCCATGTGTGGCCTG...ACAAAAATGTGCCAGTGTAATATAGGCTGGTATGGAAGAATTATCCTCGGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR GCA 90 bp | TTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGCTCCATAGAAGCTGTGGCCGTTaGTGGTACTCCACCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LAQGWELHKNVMNNTWLHRSCGR*WYSTRT Trigger: TGTCCTGGTGGAGTACCAGCAACGGCCACAGCTTCT...ATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000230627.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTCAAAAGAACCTTGAAGGTGAGATCAACTCCTGGAGCCTCTGCTGCATGCTCACAGCAGTGTGCATaGTGGAGTAATTTGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MFKRTLKVRSTPGASAACSQQCA*WSNLMS Trigger: ACTCATCAAATTACTCCACCATGCACACTGCTGTGA...GCATGCAGCAGAGGCTCCAGGAGTTGATCTCACCTTCAAGGTTCTTTTGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCGAGGATAATTCTTCCATACCAGCCTATATTACACTGGCACATTTTTGTACACACAGGCCACACATaGCTGCGAACACAGTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: SPRIILPYQPILHWHIFVHTGHT*LRTQSI Trigger: AATCGACTGTGTTCGCAGCCATGTGTGGCCTGTGTG...TACAAAAATGTGCCAGTGTAATATAGGCTGGTATGGAAGAATTATCCTCGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR GCA 90 bp | TTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGCTCCATCAGGCCACACATGGCTaGGAACACAGTCGATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LAQGWELHKNVMNNTWLHQATHG*EHSRFH Trigger: ATGGAATCGACTGTGTTCGCAGCCATGTGTGGCCTG...ATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CCA 90 bp | GAATTACATAAGAATGTTATGAACAACACATGGCTCCATCGTTGCAGCTCTGTGTATTACAACGGAGCCTaGTGCAATCCCAATTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ELHKNVMNNTWLHRCSSVYYNGA*CNPNSP Trigger: GGGGGAATTGGGATTGCACCAGGCTCCGTTGTAATA...CACAGAGCTGCAACGATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CCA 90 bp | TCAATTTTTGTCACTTGTCCAACACCTAGAAGTGCTGACACCATCCTAACATACTATTACAACGGAGCCTaGTGCAATCCCAATTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SIFVTCPTPRSADTILTYYYNGA*CNPNSP Trigger: GGGGGAATTGGGATTGCACCAGGCTCCGTTGTAATA...GTATGTTAGGATGGTGTCAGCACTTCTAGGTGTTGGACAAGTGACAAAAATTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGCTCCATCACACAGGCCACACATaGCTGCGAACACAGTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: LAQGWELHKNVMNNTWLHHTGHT*LRTQSI Trigger: AATCGACTGTGTTCGCAGCCATGTGTGGCCTGTGTG...ATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTTTCGTTAACTCGTTCCAAAATGGGATTTGAATTTCGCATGAGTATTAAAAGAAGCTGTGGCCGTTaGTGGTACTCCACCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLSLTRSKMGFEFRMSIKRSCGR*WYSTRT Trigger: TGTCCTGGTGGAGTACCAGCAACGGCCACAGCTTCT...TTTAATACTCATGCGAAATTCAAATCCCATTTTGGAACGAGTTAACGAAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 |
||
| CDS-3UTR GCA 90 bp | CATACACTTCTGGATCTGCTTCAGCAAGCAACTGGTAACCATCTACAAATGGCTAAGACACTAGAATCATaGCATCATTCTTCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTLLDLLQQATGNHLQMAKTLES*HHSSRA Trigger: GGCTCTGGAAGAATGATGGCATGATTCTAGTGTCTT...AGCCATTTGTAGATGGTTACCAGTTGCTTGCTGAAGCAGATCCAGAAGTGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
||
| CDS-3UTR CCA 90 bp | GTGATTCTTGCAGAGCATACATTCATAGCGTCTAATTTTATTCTGTGTGCACTGTATTACAACGGAGCCTaGTGCAATCCCAATTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VILAEHTFIASNFILCALYYNGA*CNPNSP Trigger: GGGGGAATTGGGATTGCACCAGGCTCCGTTGTAATA...CAGTGCACACAGAATAAAATTAGACGCTATGAATGTATGCTCTGCAAGAATCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTTTCGTTAACTCGTTCCAAAATGGGATTTGAATTTCGCATGAGTATTAAAAGCTGTGGCCGTTGCTaGTACTCCACCAGGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSLTRSKMGFEFRMSIKSCGRC*YSTRTS Trigger: TGATGTCCTGGTGGAGTACCAGCAACGGCCACAGCT...TTTAATACTCATGCGAAATTCAAATCCCATTTTGGAACGAGTTAACGAAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGAGCTGTGGCCGTTGCTaGTACTCCACCAGGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: MILAQGWELHKNVMNNTWSCGRC*YSTRTS Trigger: TGATGTCCTGGTGGAGTACCAGCAACGGCCACAGCT...CCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAAAATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000230627.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTTTCGTTAACTCGTTCCAAAATGGGATTTGAATTTCGCATGAGTATTAAAGCACGGGGCCTGTTTTaGACATGCAGTATCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLSLTRSKMGFEFRMSIKARGLF*TCSICL Trigger: CAGACAGATACTGCATGTTCAAAACAGGCCCCGTGC...TTTAATACTCATGCGAAATTCAAATCCCATTTTGGAACGAGTTAACGAAAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR TCA 90 bp | ATGATTTTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGGCACGGGGCCTGTTTTaGACATGCAGTATCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MILAQGWELHKNVMNNTWARGLF*TCSICL Trigger: CAGACAGATACTGCATGTTCAAAACAGGCCCCGTGC...CCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAAAATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGGATCTGCTTCAGCAAGCAACTGGTAACCATCTACAAATGGCTGATTTTGCATAAACTGTGCAAATaGCTTCATTCTGTTCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FWICFSKQLVTIYKWLILHKLCK*LHSVRA Trigger: AGCCCGAACAGAATGAAGGCATTTGCACAGTTTATG...CAAAATCAGCCATTTGTAGATGGTTACCAGTTGCTTGCTGAAGCAGATCCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR GCA 90 bp | ATGATTTTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGCAGGCCACACATGGCTaGGAACACAGTCGATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MILAQGWELHKNVMNNTWQATHG*EHSRFH Trigger: ATGGAATCGACTGTGTTCGCAGCCATGTGTGGCCTG...CCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAAAATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CCA 90 bp | ATTATTAGACTGCTTTCGTTAACTCGTTCCAAAATGGGATTTGAATTTCGCATGCACACAGGCCACACATaGCTGCGAACACAGTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: IIRLLSLTRSKMGFEFRMHTGHT*LRTQSI Trigger: AATCGACTGTGTTCGCAGCCATGTGTGGCCTGTGTG...CATGCGAAATTCAAATCCCATTTTGGAACGAGTTAACGAAAGCAGTCTAATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTTTCGTTAACTCGTTCCAAAATGGGATTTGAATTTCGCATGAGTATTAAACACACAGGCCACACATaGCTGCGAACACAGTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: LLSLTRSKMGFEFRMSIKHTGHT*LRTQSI Trigger: AATCGACTGTGTTCGCAGCCATGTGTGGCCTGTGTG...TTTAATACTCATGCGAAATTCAAATCCCATTTTGGAACGAGTTAACGAAAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR GCA 90 bp | CATCCAGCCTTACTATGCACCAGTCAGCAGCTAGAATATAAAGAGATTCAGATACATAAACTGTGCAAATaGCTTCATTCTGTTCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HPALLCTSQQLEYKEIQIHKLCK*LHSVRA Trigger: AGCCCGAACAGAATGAAGGCATTTGCACAGTTTATG...TATCTGAATCTCTTTATATTCTAGCTGCTGACTGGTGCATAGTAAGGCTGGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR CCA 90 bp | TACAGCAGTGAATATGGCAGATGTAATCCTTGCCCTCCAGAATCTTACTGCCAAGTAGGTTGTGTGTTTTaGTTCCTAAATCCAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YSSEYGRCNPCPPESYCQVGCVF*FLNPSD Trigger: ATCACTTGGATTTAGGAACCAAAACACACAACCTAC...TTGGCAGTAAGATTCTGGAGGGCAAGGATTACATCTGCCATATTCACTGCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR CCA 90 bp | TCCCCGAGGATAATTCTTCCATACCAGCCTATATTACACTGGCACATTTTTGTATCACAGCAGTGTGCATaGTGGAGTAATTTGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPRIILPYQPILHWHIFVSQQCA*WSNLMS Trigger: ACTCATCAAATTACTCCACCATGCACACTGCTGTGA...TACAAAAATGTGCCAGTGTAATATAGGCTGGTATGGAAGAATTATCCTCGGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR CCA 90 bp | GAATTACATAAGAATGTTATGAACAACACATGGCTCCATCGTTGCAGCTCTGTGTCACAGCAGTGTGCATaGTGGAGTAATTTGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ELHKNVMNNTWLHRCSSVSQQCA*WSNLMS Trigger: ACTCATCAAATTACTCCACCATGCACACTGCTGTGA...CACAGAGCTGCAACGATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR GCA 90 bp | GTGATTCTTGCAGAGCATACATTCATAGCGTCTAATTTTATTCTGTGTGCACTGCATAAACTGTGCAAATaGCTTCATTCTGTTCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VILAEHTFIASNFILCALHKLCK*LHSVRA Trigger: AGCCCGAACAGAATGAAGGCATTTGCACAGTTTATG...CAGTGCACACAGAATAAAATTAGACGCTATGAATGTATGCTCTGCAAGAATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGCAGGGAATAAAGGTCTTTGCATGACCAATGGTTTTCATTTGAGAAAAGTAGGTTGTGTGTTTTaGTTCCTAAATCCAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRAGNKGLCMTNGFHLRKVGCVF*FLNPSD Trigger: ATCACTTGGATTTAGGAACCAAAACACACAACCTAC...TTTTCTCAAATGAAAACCATTGGTCATGCAAAGACCTTTATTCCCTGCCCTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGCAGGGAATAAAGGTCTTTGCATGACCAATGGTTTTCATTTGAGAAAAAATTTGATGAGTTCGTaGAGCATAATGGAAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRAGNKGLCMTNGFHLRKNLMSS*SIMEME Trigger: CTCCATTTCCATTATGCTCCACGAACTCATCAAATT...TTTTCTCAAATGAAAACCATTGGTCATGCAAAGACCTTTATTCCCTGCCCTCCC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
||
| CDS-3UTR CCA 90 bp | GTGATTCTTGCAGAGCATACATTCATAGCGTCTAATTTTATTCTGTGTGCACTGTCCACCAGGACATCATaGGACAAATTGATTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VILAEHTFIASNFILCALSTRTS*DKLIWS Trigger: TGACCAAATCAATTTGTCCCATGATGTCCTGGTGGA...CAGTGCACACAGAATAAAATTAGACGCTATGAATGTATGCTCTGCAAGAATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059102.13 |
||
| CDS-3UTR GCA 90 bp | CATCCAGCCTTACTATGCACCAGTCAGCAGCTAGAATATAAAGAGATTCAGATACTTGTGCATAAACTGTaGAAATGCCTTCATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HPALLCTSQQLEYKEIQILVHKL*KCLHSV Trigger: AACAGAATGAAGGCATTTGCACAGTTTATGCACAAG...TATCTGAATCTCTTTATATTCTAGCTGCTGACTGGTGCATAGTAAGGCTGGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR GCA 90 bp | GAATTACATAAGAATGTTATGAACAACACATGGCTCCATCGTTGCAGCTCTGTGCTTGTGCATAAACTGTaGAAATGCCTTCATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ELHKNVMNNTWLHRCSSVLVHKL*KCLHSV Trigger: AACAGAATGAAGGCATTTGCACAGTTTATGCACAAG...CACAGAGCTGCAACGATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCGAGGATAATTCTTCCATACCAGCCTATATTACACTGGCACATTTTTGTACTTGTGCATAAACTGTaGAAATGCCTTCATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPRIILPYQPILHWHIFVLVHKL*KCLHSV Trigger: AACAGAATGAAGGCATTTGCACAGTTTATGCACAAG...TACAAAAATGTGCCAGTGTAATATAGGCTGGTATGGAAGAATTATCCTCGGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTAAATGTTCAAAAGAACCTTGAAGGTGAGATCAACTCCTGGAGCCTCTGCGTAGGTTGTGTGTTTTaGTTCCTAAATCCAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLNVQKNLEGEINSWSLCVGCVF*FLNPSD Trigger: ATCACTTGGATTTAGGAACCAAAACACACAACCTAC...GCAGAGGCTCCAGGAGTTGATCTCACCTTCAAGGTTCTTTTGAACATTTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
||
| CDS-3UTR CCA 90 bp | GAATTACATAAGAATGTTATGAACAACACATGGCTCCATCGTTGCAGCTCTGTGAATTTGATGAGTTCGTaGAGCATAATGGAAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELHKNVMNNTWLHRCSSVNLMSS*SIMEME Trigger: CTCCATTTCCATTATGCTCCACGAACTCATCAAATT...CACAGAGCTGCAACGATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR GCA 90 bp | ATGATTTTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGCATAAACTGTGCAAATaGCTTCATTCTGTTCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MILAQGWELHKNVMNNTWHKLCK*LHSVRA Trigger: AGCCCGAACAGAATGAAGGCATTTGCACAGTTTATG...CCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAAAATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGCTCCATAATTTGATGAGTTCGTaGAGCATAATGGAAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LAQGWELHKNVMNNTWLHNLMSS*SIMEME Trigger: CTCCATTTCCATTATGCTCCACGAACTCATCAAATT...ATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGTCACAGCAGTGTGCATaGTGGAGTAATTTGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MILAQGWELHKNVMNNTWSQQCA*WSNLMS Trigger: ACTCATCAAATTACTCCACCATGCACACTGCTGTGA...CCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAAAATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CCA 90 bp | GATGTAAGCTTAATTAATGCTGCATGTGAAACTCCAAATGTCACATTTCATGAGTCCACCAGGACATCATaGGACAAATTGATTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DVSLINAACETPNVTFHESTRTS*DKLIWS Trigger: TGACCAAATCAATTTGTCCCATGATGTCCTGGTGGA...CTCATGAAATGTGACATTTGGAGTTTCACATGCAGCATTAATTAAGCTTACATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGTCCACCAGGACATCATaGGACAAATTGATTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MILAQGWELHKNVMNNTWSTRTS*DKLIWS Trigger: TGACCAAATCAATTTGTCCCATGATGTCCTGGTGGA...CCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAAAATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000230627.2 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGGTAGGTTGTGTGTTTTaGTTCCTAAATCCAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: MILAQGWELHKNVMNNTWVGCVF*FLNPSD Trigger: ATCACTTGGATTTAGGAACCAAAACACACAACCTAC...CCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAAAATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CCA 90 bp | GATGTAAGCTTAATTAATGCTGCATGTGAAACTCCAAATGTCACATTTCATGAGAATTTGATGAGTTCGTaGAGCATAATGGAAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DVSLINAACETPNVTFHENLMSS*SIMEME Trigger: CTCCATTTCCATTATGCTCCACGAACTCATCAAATT...CTCATGAAATGTGACATTTGGAGTTTCACATGCAGCATTAATTAAGCTTACATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAGGGGCACCCGCAGGACACGTTCTTCTCAATCAACTGCTGTCTTCCCAGCAGCACGGGGCCTGTTTaGAACATGCAGTATCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEGHPQDTFFSINCCLPSSTGPV*NMQYLS Trigger: AGACAGATACTGCATGTTCAAAACAGGCCCCGTGCT...GCTGGGAAGACAGCAGTTGATTGAGAAGAACGTGTCCTGCGGGTGCCCCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR CAA 90 bp | CTGGAGGGGCACCCGCAGGACACGTTCTTCTCAATCAACTGCTGTCTTCCCAGCGCATGGTGGAGTAATTaGATGAGTTCGTGGAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: LEGHPQDTFFSINCCLPSAWWSN*MSSWSI Trigger: TATGCTCCACGAACTCATCAAATTACTCCACCATGC...GCTGGGAAGACAGCAGTTGATTGAGAAGAACGTGTCCTGCGGGTGCCCCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS GCA 90 bp | GTCTTCTCCATCTCCCTCCAACCGGAGTTCCTTGTGCATAAACTGTaGAAATGCCTTCATTCTGTTCGGGCTCCCACCAACGCAGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: VFSISLQPEFLVHKL*KCLHSVRAPTNADK Trigger: TTTGTCTGCGTTGGTGGGAGCCCGAACAGAATGAAGGCATTTGCACAGTTTATGCACAAGGAACTCCGGTTGGAGGGAGATGGAGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CAA 90 bp | GTCTTCCCAGCTGTGCTTTACCACAGACCAGCCCACTCTCAACGAGTCCTGCTGCTCTCGTATGTATTCTaGTCAGGTCTCATGGATCTA | + |
|
Preference number: 5 (lower is better) Translates to: VFPAVLYHRPAHSQRVLLLSYVF*SGLMDL Trigger: TAGATCCATGAGACCTGACAAGAATACATACGAGAG...CAGCAGGACTCGTTGAGAGTGGGCTGGTCTGTGGTAAAGCACAGCTGGGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR CAA 90 bp | GTCTTCCCAGCTGTGCTTTACCACAGACCAGCCCACTCTCAACGAGTCCTGCTGTTACATCCCCAAACATaGCTGGTAGGTTGTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VFPAVLYHRPAHSQRVLLLHPQT*LVGCVF Trigger: AAACACACAACCTACCAGCAATGTTTGGGGATGTAA...CAGCAGGACTCGTTGAGAGTGGGCTGGTCTGTGGTAAAGCACAGCTGGGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR CAA 90 bp | AACGAGTCCTGCTGTGTTGGTCCGAGTGAGGCCTCAGGCAGTGTTTTGGGAAAGTCCAACCGGAGTTCCTaGTGCATAAACTGTGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: NESCCVGPSEASGSVLGKSNRSS*CINCAN Trigger: ATTTGCACAGTTTATGCACAAGGAACTCCGGTTGGA...CTTTCCCAAAACACTGCCTGAGGCCTCACTCGGACCAACACAGCAGGACTCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR CAA 90 bp | TGTGGGATCCACTGGAGCCTCAGGAGGAAGGGAACACTGGGCTCAGATTTAAAGTCATTAGCCAGTTCTTaGTCAAGCTCAGTGCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: CGIHWSLRRKGTLGSDLKSLASS*SSSVLR Trigger: CCGAAGCACTGAGCTTGACAAAGAACTGGCTAATGA...CTTTAAATCTGAGCCCAGTGTTCCCTTCCTCCTGAGGCTCCAGTGGATCCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS GCA 90 bp | TCCATCTCCCTCCAACCGGAGTTCCTTGTGCATAAACTGTGCAAATaGCTTCATTCTGTTCGGGCTCCCACCAACGCAGACAAACTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: SISLQPEFLVHKLCK*LHSVRAPTNADKLY Trigger: GTAAAGTTTGTCTGCGTTGGTGGGAGCCCGAACAGAATGAAGGCATTTGCACAGTTTATGCACAAGGAACTCCGGTTGGAGGGAGATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS GCA 90 bp | ATGTCTTCAATGTCTTCTCCATCTCCCTCCAACCGGAGTTCCTTGTaGATAAACTGTGCAAATGCCTTCATTCTGTTCGGGCTCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: MSSMSSPSPSNRSSL*INCANAFILFGLPP Trigger: TGGTGGGAGCCCGAACAGAATGAAGGCATTTGCACAGTTTATGCACAAGGAACTCCGGTTGGAGGGAGATGGAGAAGACATTGAAGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CAA 90 bp | ACGGGGAACCGATTGAAGAGGGATGCAGAAGAGTCTATTCATCTGACTCCTCTGTGCTCAAATCGAGGCTaGAAGAAGGAGTCTACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TGNRLKRDAEESIHLTPLCSNRG*KKESTA Trigger: AGCTGTAGACTCCTTCTTCAAGCCTCGATTTGAGCA...CAGAGGAGTCAGATGAATAGACTCTTCTGCATCCCTCTTCAATCGGTTCCCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR CAA 90 bp | TGTGGGATCCACTGGAGCCTCAGGAGGAAGGGAACACTGGGCTCAGATTTAAAGAACATTGCTGGTAGGTaGTGTGTTTTGGTTCCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: CGIHWSLRRKGTLGSDLKNIAGR*CVLVPK Trigger: TTTAGGAACCAAAACACACAACCTACCAGCAATGTT...CTTTAAATCTGAGCCCAGTGTTCCCTTCCTCCTGAGGCTCCAGTGGATCCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS-3UTR CAA 90 bp | ATGTTCAAAAGAACCTTGAAGGTGAGATCAACTCCTGGAGCCTCTGCTGCATGCATGAGGGTTGGAACATaGGGGATTTCTCTGCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: MFKRTLKVRSTPGASAACMRVGT*GISLLQ Trigger: CTGTAGCAGAGAAATCCCCAATGTTCCAACCCTCAT...GCATGCAGCAGAGGCTCCAGGAGTTGATCTCACCTTCAAGGTTCTTTTGAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGTACTCCACCAGGACATCATGGGACAAATTGATTTGGTCACTCTCGAGATGAGGGTTGGAACATaGGGGATTTCTCTGCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: LLVLHQDIMGQIDLVTLEMRVGT*GISLLQ Trigger: CTGTAGCAGAGAAATCCCCAATGTTCCAACCCTCAT...CTCGAGAGTGACCAAATCAATTTGTCCCATGATGTCCTGGTGGAGTACCAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
||
| CDS TCA 90 bp | TGTATCTGTTATTACAACGGAGCCTGGTGCAATCCCAATTCCCCCTaGCGTTCCAATTCTGATGATGGTAACATCACAGCAGTGTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: CICYYNGAWCNPNSP*RSNSDDGNITAVCM Trigger: CATGCACACTGCTGTGATGTTACCATCATCAGAATTGGAACGTCAGGGGGAATTGGGATTGCACCAGGCTCCGTTGTAATAACAGATACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS TCA 90 bp | GGCCACACATGGCTGCGAACACAGTCGATTCCATTTCAATGTTCCTaGCACCAGCTCTGTATGCTCTCTTCAAGTAGTCTAGCTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GHTWLRTQSIPFQCS*HQLCMLSSSSLAFS Trigger: AGAAAAAGCTAGACTACTTGAAGAGAGCATACAGAGCTGGTGTCAGGAACATTGAAATGGAATCGACTGTGTTCGCAGCCATGTGTGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CAA 90 bp | ATGTTCAAAAGAACCTTGAAGGTGAGATCAACTCCTGGAGCCTCTGCTGCATGCGCATGGTGGAGTAATTaGATGAGTTCGTGGAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: MFKRTLKVRSTPGASAACAWWSN*MSSWSI Trigger: TATGCTCCACGAACTCATCAAATTACTCCACCATGC...GCATGCAGCAGAGGCTCCAGGAGTTGATCTCACCTTCAAGGTTCTTTTGAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
||
| CDS-3UTR CAA 90 bp | GATGCAGAAGAGTCTATTCATCTGACTCCTCTGCTCTTTGACGGATGGAATGAGATGAGGGTTGGAACATaGGGGATTTCTCTGCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: DAEESIHLTPLLFDGWNEMRVGT*GISLLQ Trigger: CTGTAGCAGAGAAATCCCCAATGTTCCAACCCTCAT...CTCATTCCATCCGTCAAAGAGCAGAGGAGTCAGATGAATAGACTCTTCTGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS CCA 90 bp | GACGTTCCAATTCTGATGATGGTAACATCACAGCAGTGTGCATGGTaGAGTAATTTGATGAGTTCGTGGAGCATAATGGAAATGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DVPILMMVTSQQCAW*SNLMSSWSIMEMEG Trigger: CCCCTCCATTTCCATTATGCTCCACGAACTCATCAAATTACTCCACCATGCACACTGCTGTGATGTTACCATCATCAGAATTGGAACGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CAA 90 bp | ATGTTCAAAAGAACCTTGAAGGTGAGATCAACTCCTGGAGCCTCTGCTGCATGCCTCTCGTATGTATTCTaGTCAGGTCTCATGGATCTA | + |
|
Preference number: 5 (lower is better) Translates to: MFKRTLKVRSTPGASAACLSYVF*SGLMDL Trigger: TAGATCCATGAGACCTGACAAGAATACATACGAGAG...GCATGCAGCAGAGGCTCCAGGAGTTGATCTCACCTTCAAGGTTCTTTTGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
||
| CDS-3UTR CAA 90 bp | TTCTGGATCTGCTTCAGCAAGCAACTGGTAACCATCTACAAATGGCTGATTTTGAGCACGGGGCCTGTTTaGAACATGCAGTATCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FWICFSKQLVTIYKWLILSTGPV*NMQYLS Trigger: AGACAGATACTGCATGTTCAAAACAGGCCCCGTGCT...CAAAATCAGCCATTTGTAGATGGTTACCAGTTGCTTGCTGAAGCAGATCCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR CAA 90 bp | CATACACTTCTGGATCTGCTTCAGCAAGCAACTGGTAACCATCTACAAATGGCTTGCTCAAATCGAGGCTaGAAGAAGGAGTCTACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HTLLDLLQQATGNHLQMACSNRG*KKESTA Trigger: AGCTGTAGACTCCTTCTTCAAGCCTCGATTTGAGCA...AGCCATTTGTAGATGGTTACCAGTTGCTTGCTGAAGCAGATCCAGAAGTGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR CAA 90 bp | ACAACCCCTCTAGTGGAGAATGGTTCAAAGGCATTTAGCAGTTCAGCTGGAGGGATTTCTCTGCTACAGTaGAACAGATCATTAGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TTPLVENGSKAFSSSAGGISLLQ*NRSLAS Trigger: ACTGGCTAATGATCTGTTCAACTGTAGCAGAGAAAT...CCCTCCAGCTGAACTGCTAAATGCCTTTGAACCATTCTCCACTAGAGGGGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071543.12 |
||
| CDS CCA 90 bp | CCTGACGTTCCAATTCTGATGATGGTAACATCACAGCAGTGTGCATaGTGGAGTAATTTGATGAGTTCGTGGAGCATAATGGAAATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PDVPILMMVTSQQCA*WSNLMSSWSIMEME Trigger: CTCCATTTCCATTATGCTCCACGAACTCATCAAATTACTCCACCATGCACACTGCTGTGATGTTACCATCATCAGAATTGGAACGTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS CCA 90 bp | GCCTTCATAAAAGTCATAGGTACACATCGTGTGTCCGATGAGGGTTaGAACATTGGGGATTTCTCTGCTACAGTTGAACAGATCATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: AFIKVIGTHRVSDEG*NIGDFSATVEQIIS Trigger: GCTAATGATCTGTTCAACTGTAGCAGAGAAATCCCCAATGTTCCAACCCTCATCGGACACACGATGTGTACCTATGACTTTTATGAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CAA 90 bp | CACCATCCTAACATACACTTCTGGATCTGCTTCAGCAAGCAACTGGTAACCATCTTACATCCCCAAACATaGCTGGTAGGTTGTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HHPNIHFWICFSKQLVTILHPQT*LVGCVF Trigger: AAACACACAACCTACCAGCAATGTTTGGGGATGTAA...GATGGTTACCAGTTGCTTGCTGAAGCAGATCCAGAAGTGTATGTTAGGATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR CAA 90 bp | GAATTACATAAGAATGTTATGAACAACACATGGCTCCATCGTTGCAGCTCTGTGAGCACGGGGCCTGTTTaGAACATGCAGTATCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ELHKNVMNNTWLHRCSSVSTGPV*NMQYLS Trigger: AGACAGATACTGCATGTTCAAAACAGGCCCCGTGCT...CACAGAGCTGCAACGATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CAA 90 bp | ACCAGGACATCATGGGACAAATTGATTTGGTCACTCTCGAGTCTGTCAAGAAGTTTACATCCCCAAACATaGCTGGTAGGTTGTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TRTSWDKLIWSLSSLSRSLHPQT*LVGCVF Trigger: AAACACACAACCTACCAGCAATGTTTGGGGATGTAA...ACTTCTTGACAGACTCGAGAGTGACCAAATCAATTTGTCCCATGATGTCCTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTCACTTGTCCAACACCTAGAAGTGCTGACACCATCCTAACATACACTTCTTCCAACCGGAGTTCCTaGTGCATAAACTGTGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FVTCPTPRSADTILTYTSSNRSS*CINCAN Trigger: ATTTGCACAGTTTATGCACAAGGAACTCCGGTTGGA...AGAAGTGTATGTTAGGATGGTGTCAGCACTTCTAGGTGTTGGACAAGTGACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR CAA 90 bp | GAATTACATAAGAATGTTATGAACAACACATGGCTCCATCGTTGCAGCTCTGTGTGCTCAAATCGAGGCTaGAAGAAGGAGTCTACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ELHKNVMNNTWLHRCSSVCSNRG*KKESTA Trigger: AGCTGTAGACTCCTTCTTCAAGCCTCGATTTGAGCA...CACAGAGCTGCAACGATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CAA 90 bp | TATACATATTTGCAAAACCTCCTCCACTCTTACCCCAACCAGACTCTCCAATTTTCATTAGCCAGTTCTTaGTCAAGCTCAGTGCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: YTYLQNLLHSYPNQTLQFSLASS*SSSVLR Trigger: CCGAAGCACTGAGCTTGACAAAGAACTGGCTAATGA...AAATTGGAGAGTCTGGTTGGGGTAAGAGTGGAGGAGGTTTTGCAAATATGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
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| CDS-3UTR CAA 90 bp | GAATTACATAAGAATGTTATGAACAACACATGGCTCCATCGTTGCAGCTCTGTGTCATTAGCCAGTTCTTaGTCAAGCTCAGTGCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ELHKNVMNNTWLHRCSSVSLASS*SSSVLR Trigger: CCGAAGCACTGAGCTTGACAAAGAACTGGCTAATGA...CACAGAGCTGCAACGATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTCACTTGTCCAACACCTAGAAGTGCTGACACCATCCTAACATACACTTCTTTACATCCCCAAACATaGCTGGTAGGTTGTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FVTCPTPRSADTILTYTSLHPQT*LVGCVF Trigger: AAACACACAACCTACCAGCAATGTTTGGGGATGTAA...AGAAGTGTATGTTAGGATGGTGTCAGCACTTCTAGGTGTTGGACAAGTGACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
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| CDS-3UTR CAA 90 bp | TCCCCGAGGATAATTCTTCCATACCAGCCTATATTACACTGGCACATTTTTGTATCCAACCGGAGTTCCTaGTGCATAAACTGTGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SPRIILPYQPILHWHIFVSNRSS*CINCAN Trigger: ATTTGCACAGTTTATGCACAAGGAACTCCGGTTGGA...TACAAAAATGTGCCAGTGTAATATAGGCTGGTATGGAAGAATTATCCTCGGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCCGAGGATAATTCTTCCATACCAGCCTATATTACACTGGCACATTTTTGTGCATGGTGGAGTAATTaGATGAGTTCGTGGAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: FPEDNSSIPAYITLAHFCAWWSN*MSSWSI Trigger: TATGCTCCACGAACTCATCAAATTACTCCACCATGC...ACAAAAATGTGCCAGTGTAATATAGGCTGGTATGGAAGAATTATCCTCGGGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR CAA 90 bp | TTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGCTCCATTCATTAGCCAGTTCTTaGTCAAGCTCAGTGCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LAQGWELHKNVMNNTWLHSLASS*SSSVLR Trigger: CCGAAGCACTGAGCTTGACAAAGAACTGGCTAATGA...ATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CAA 90 bp | GAATTACATAAGAATGTTATGAACAACACATGGCTCCATCGTTGCAGCTCTGTGCTCTCGTATGTATTCTaGTCAGGTCTCATGGATCTA | + |
|
Preference number: 5 (lower is better) Translates to: ELHKNVMNNTWLHRCSSVLSYVF*SGLMDL Trigger: TAGATCCATGAGACCTGACAAGAATACATACGAGAG...CACAGAGCTGCAACGATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
||
| CDS-3UTR CAA 90 bp | GAATTACATAAGAATGTTATGAACAACACATGGCTCCATCGTTGCAGCTCTGTGTTACATCCCCAAACATaGCTGGTAGGTTGTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ELHKNVMNNTWLHRCSSVLHPQT*LVGCVF Trigger: AAACACACAACCTACCAGCAATGTTTGGGGATGTAA...CACAGAGCTGCAACGATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
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| CDS-3UTR CAA 90 bp | ATTATTAGACTGCTTTCGTTAACTCGTTCCAAAATGGGATTTGAATTTCGCATGAGCACGGGGCCTGTTTaGAACATGCAGTATCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IIRLLSLTRSKMGFEFRMSTGPV*NMQYLS Trigger: AGACAGATACTGCATGTTCAAAACAGGCCCCGTGCT...CATGCGAAATTCAAATCCCATTTTGGAACGAGTTAACGAAAGCAGTCTAATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
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| CDS-3UTR CAA 90 bp | ATGATTTTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGAGCACGGGGCCTGTTTaGAACATGCAGTATCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MILAQGWELHKNVMNNTWSTGPV*NMQYLS Trigger: AGACAGATACTGCATGTTCAAAACAGGCCCCGTGCT...CCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAAAATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS-3UTR CAA 90 bp | GAATTACATAAGAATGTTATGAACAACACATGGCTCCATCGTTGCAGCTCTGTGACATCATGGGACAAATaGATTTGGTCACTCTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ELHKNVMNNTWLHRCSSVTSWDK*IWSLSS Trigger: ACTCGAGAGTGACCAAATCAATTTGTCCCATGATGT...CACAGAGCTGCAACGATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000230627.2 |
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| CDS-3UTR CAA 90 bp | GAATTACATAAGAATGTTATGAACAACACATGGCTCCATCGTTGCAGCTCTGTGAACATTGCTGGTAGGTaGTGTGTTTTGGTTCCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: ELHKNVMNNTWLHRCSSVNIAGR*CVLVPK Trigger: TTTAGGAACCAAAACACACAACCTACCAGCAATGTT...CACAGAGCTGCAACGATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
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| CDS-3UTR CAA 90 bp | CTGCTTTCGTTAACTCGTTCCAAAATGGGATTTGAATTTCGCATGAGTATTAAATGCTCAAATCGAGGCTaGAAGAAGGAGTCTACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSLTRSKMGFEFRMSIKCSNRG*KKESTA Trigger: AGCTGTAGACTCCTTCTTCAAGCCTCGATTTGAGCA...TTTAATACTCATGCGAAATTCAAATCCCATTTTGGAACGAGTTAACGAAAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
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| CDS-3UTR CAA 90 bp | ATTATTAGACTGCTTTCGTTAACTCGTTCCAAAATGGGATTTGAATTTCGCATGTCATTAGCCAGTTCTTaGTCAAGCTCAGTGCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: IIRLLSLTRSKMGFEFRMSLASS*SSSVLR Trigger: CCGAAGCACTGAGCTTGACAAAGAACTGGCTAATGA...CATGCGAAATTCAAATCCCATTTTGGAACGAGTTAACGAAAGCAGTCTAATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
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| CDS-3UTR CAA 90 bp | TATACATATTTGCAAAACCTCCTCCACTCTTACCCCAACCAGACTCTCCAATTTATTTCTCTGCTACAGTaGAACAGATCATTAGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: YTYLQNLLHSYPNQTLQFISLLQ*NRSLAS Trigger: ACTGGCTAATGATCTGTTCAACTGTAGCAGAGAAAT...AAATTGGAGAGTCTGGTTGGGGTAAGAGTGGAGGAGGTTTTGCAAATATGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059102.13 ENSMUST00000229923.2 |
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| CDS-3UTR CAA 90 bp | GAATTACATAAGAATGTTATGAACAACACATGGCTCCATCGTTGCAGCTCTGTGATTTCTCTGCTACAGTaGAACAGATCATTAGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ELHKNVMNNTWLHRCSSVISLLQ*NRSLAS Trigger: ACTGGCTAATGATCTGTTCAACTGTAGCAGAGAAAT...CACAGAGCTGCAACGATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
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| CDS-3UTR CAA 90 bp | GATGTAAGCTTAATTAATGCTGCATGTGAAACTCCAAATGTCACATTTCATGAGATGAGGGTTGGAACATaGGGGATTTCTCTGCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: DVSLINAACETPNVTFHEMRVGT*GISLLQ Trigger: CTGTAGCAGAGAAATCCCCAATGTTCCAACCCTCAT...CTCATGAAATGTGACATTTGGAGTTTCACATGCAGCATTAATTAAGCTTACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
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| CDS-3UTR CAA 90 bp | ATGATTTTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGATGAGGGTTGGAACATaGGGGATTTCTCTGCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: MILAQGWELHKNVMNNTWMRVGT*GISLLQ Trigger: CTGTAGCAGAGAAATCCCCAATGTTCCAACCCTCAT...CCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAAAATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
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| CDS-3UTR CAA 90 bp | TTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGCTCCATACATCATGGGACAAATaGATTTGGTCACTCTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LAQGWELHKNVMNNTWLHTSWDK*IWSLSS Trigger: ACTCGAGAGTGACCAAATCAATTTGTCCCATGATGT...ATGGAGCCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000230627.2 |
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| CDS-3UTR CAA 90 bp | ATGATTTTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGTCCAACCGGAGTTCCTaGTGCATAAACTGTGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: MILAQGWELHKNVMNNTWSNRSS*CINCAN Trigger: ATTTGCACAGTTTATGCACAAGGAACTCCGGTTGGA...CCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAAAATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
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| CDS-3UTR CAA 90 bp | CTGCTTTCGTTAACTCGTTCCAAAATGGGATTTGAATTTCGCATGAGTATTAAAGCATGGTGGAGTAATTaGATGAGTTCGTGGAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: LLSLTRSKMGFEFRMSIKAWWSN*MSSWSI Trigger: TATGCTCCACGAACTCATCAAATTACTCCACCATGC...TTTAATACTCATGCGAAATTCAAATCCCATTTTGGAACGAGTTAACGAAAGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
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| CDS-3UTR CAA 90 bp | ATGATTTTAGCCCAAGGATGGGAATTACATAAGAATGTTATGAACAACACATGGGCATGGTGGAGTAATTaGATGAGTTCGTGGAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: MILAQGWELHKNVMNNTWAWWSN*MSSWSI Trigger: TATGCTCCACGAACTCATCAAATTACTCCACCATGC...CCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCTAAAATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
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| CDS-3UTR CAA 90 bp | ATGGCTGATTTTGATGTAAGCTTAATTAATGCTGCATGTGAAACTCCAAATGTCATTTCTCTGCTACAGTaGAACAGATCATTAGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: MADFDVSLINAACETPNVISLLQ*NRSLAS Trigger: ACTGGCTAATGATCTGTTCAACTGTAGCAGAGAAAT...GACATTTGGAGTTTCACATGCAGCATTAATTAAGCTTACATCAAAATCAGCCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
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| CDS-3UTR CAA 90 bp | ATTATTAGACTGCTTTCGTTAACTCGTTCCAAAATGGGATTTGAATTTCGCATGATTTCTCTGCTACAGTaGAACAGATCATTAGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: IIRLLSLTRSKMGFEFRMISLLQ*NRSLAS Trigger: ACTGGCTAATGATCTGTTCAACTGTAGCAGAGAAAT...CATGCGAAATTCAAATCCCATTTTGGAACGAGTTAACGAAAGCAGTCTAATAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059102.13 ENSMUST00000102755.4 ENSMUST00000229923.2 |
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| CDS TCA 72 bp | TTCTGTCTCTCCTCTGAGACTCGGATCTCAGGCCGTTaGGCACCTCTCAGGCCACACAGGCCACACATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FCLSSETRISGR*APLRPHRPHMA Trigger: AGCCATGTGTGGCCTGTGTGGCCTGAGAGGTGCTCAACGGCCTGAGATCCGAGTCTCAGAGGAGAGACAGAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
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| CDS CCA 72 bp | ATACACAGACCGTTTTCTGTGAATCTGAGGGCAGCCTaGTCTGTACTGTGGAATCTCAGTCCAGCCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: IHRPFSVNLRAA*SVLWNLSPARA Trigger: AGCCCTGGCTGGACTGAGATTCCACAGTACAGACCAGGCTGCCCTCAGATTCACAGAAAACGGTCTGTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059102.13 |
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| CDS GCA 72 bp | ATCTCCCTCCAACCGGAGTTCCTTGTGCATAAACTGTaGAAATGCCTTCATTCTGTTCGGGCTCCCACCAAC | + |
|
Preference number: 6 (lower is better) Translates to: ISLQPEFLVHKL*KCLHSVRAPTN Trigger: GTTGGTGGGAGCCCGAACAGAATGAAGGCATTTGCACAGTTTATGCACAAGGAACTCCGGTTGGAGGGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
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| CDS CAA 90 bp | CAGATGTCTTCAATGTCTTCTCCATCTCCCTCCAACCGGAGTTCCTaGTGCATAAACTGTGCAAATGCCTTCATTCTGTTCGGGCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QMSSMSSPSPSNRSS*CINCANAFILFGLP Trigger: TGGGAGCCCGAACAGAATGAAGGCATTTGCACAGTTTATGCACAAGGAACTCCGGTTGGAGGGAGATGGAGAAGACATTGAAGACATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
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| CDS GCA 72 bp | ATGTCTTCTCCATCTCCCTCCAACCGGAGTTCCTTGTaGATAAACTGTGCAAATGCCTTCATTCTGTTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: MSSPSPSNRSSL*INCANAFILFG Trigger: CCCGAACAGAATGAAGGCATTTGCACAGTTTATGCACAAGGAACTCCGGTTGGAGGGAGATGGAGAAGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
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| CDS GCA 72 bp | ATCCTGGTCTGCCTCCTGTGGAAGACACTAGAATCATaGCATCATTCTTCCAGAGCCTTTCCACTTTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ILVCLLWKTLES*HHSSRAFPLSV Trigger: GACAGAAAGTGGAAAGGCTCTGGAAGAATGATGGCATGATTCTAGTGTCTTCCACAGGAGGCAGACCAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229923.2 |
||
| CDS CAA 90 bp | CTTCGGGTGACCACGTTATCCAAGATGACCTGCTCAAATCGAGGCTaGAAGAAGGAGTCTACAGCTGTATCTGTTATTACAACGGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LRVTTLSKMTCSNRG*KKESTAVSVITTEP Trigger: AGGCTCCGTTGTAATAACAGATACAGCTGTAGACTCCTTCTTCAAGCCTCGATTTGAGCAGGTCATCTTGGATAACGTGGTCACCCGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS CAA 90 bp | TTGGGGATTTCTCTGCTACAGTTGAACAGATCATTAGCCAGTTCTTaGTCAAGCTCAGTGCTTCGGGTGACCACGTTATCCAAGATGACC | + |
|
Preference number: 6 (lower is better) Translates to: LGISLLQLNRSLASS*SSSVLRVTTLSKMT Trigger: GGTCATCTTGGATAACGTGGTCACCCGAAGCACTGAGCTTGACAAAGAACTGGCTAATGATCTGTTCAACTGTAGCAGAGAAATCCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS CAA 72 bp | TCTCTGCTACAGTTGAACAGATCATTAGCCAGTTCTTaGTCAAGCTCAGTGCTTCGGGTGACCACGTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: SLLQLNRSLASS*SSSVLRVTTLS Trigger: GGATAACGTGGTCACCCGAAGCACTGAGCTTGACAAAGAACTGGCTAATGATCTGTTCAACTGTAGCAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS TCA 72 bp | TGGCTGCGAACACAGTCGATTCCATTTCAATGTTCCTaGCACCAGCTCTGTATGCTCTCTTCAAGTAGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: WLRTQSIPFQCS*HQLCMLSSSSL Trigger: TAGACTACTTGAAGAGAGCATACAGAGCTGGTGTCAGGAACATTGAAATGGAATCGACTGTGTTCGCAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS CCA 72 bp | AAAGTCATAGGTACACATCGTGTGTCCGATGAGGGTTaGAACATTGGGGATTTCTCTGCTACAGTTGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: KVIGTHRVSDEG*NIGDFSATVEQ Trigger: CTGTTCAACTGTAGCAGAGAAATCCCCAATGTTCCAACCCTCATCGGACACACGATGTGTACCTATGACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS CAA 72 bp | TCAATGTCTTCTCCATCTCCCTCCAACCGGAGTTCCTaGTGCATAAACTGTGCAAATGCCTTCATTCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SMSSPSPSNRSS*CINCANAFILF Trigger: GAACAGAATGAAGGCATTTGCACAGTTTATGCACAAGGAACTCCGGTTGGAGGGAGATGGAGAAGACATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
||
| CDS CAA 72 bp | TCCCACCAACGCAGACAAACTTTACATCCCCAAACATaGCTGGTAGGTTGTGTGTTTTGGTTCCTAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: SHQRRQTLHPQT*LVGCVFWFLNP Trigger: TGGATTTAGGAACCAAAACACACAACCTACCAGCAATGTTTGGGGATGTAAAGTTTGTCTGCGTTGGTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
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| CDS CAA 72 bp | ACCACGTTATCCAAGATGACCTGCTCAAATCGAGGCTaGAAGAAGGAGTCTACAGCTGTATCTGTTATTACA | + |
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Preference number: 6 (lower is better) Translates to: TTLSKMTCSNRG*KKESTAVSVIT Trigger: TGTAATAACAGATACAGCTGTAGACTCCTTCTTCAAGCCTCGATTTGAGCAGGTCATCTTGGATAACGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059102.13 ENSMUST00000071543.12 ENSMUST00000102755.4 ENSMUST00000229923.2 ENSMUST00000230627.2 |
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