Pregenerated sensors for UPP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020407Ensembl transcript IDs: ENSMUST00000020677.8, ENSMUST00000101525.9, ENSMUST00000130522.8, ENSMUST00000164791.8, ENSMUST00000166455.2, ENSMUST00000170444.8, ENSMUST00000172452.8
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGGCTGGCGTAGCGGTCAGTaGCTGCACAGATGTTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: RFIAQELQRLLRGGKAQGWRSGQ*LHRCWD Trigger: ATCCCAACATCTGTGCAGGCACTGACCGCTACGCCA...GCCCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | AGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGGCCGTCCAGGTTGGTGTTaGGAATCACCCGTTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RFIAQELQRLLRGGKAQGRPGWC*ESPVFP Trigger: TGGGAAAACGGGTGATTCGCAACACCAACCTGGACG...GCCCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | AGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGGCAGCCGCTGTGGTCTCTaGTGGTATTCCACAAGCACA | + |
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Preference number: 4 (lower is better) Translates to: RFIAQELQRLLRGGKAQGSRCGL*WYSTST Trigger: TGTGCTTGTGGAATACCAGCAGAGACCACAGCGGCT...GCCCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | ATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGGCCCGGCTTTATACATaGCGTAGCGGTCAGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IDLLPRSCRGFSGAERHRARLYT*RSGQCL Trigger: CAGGCACTGACCGCTACGCCATGTATAAAGCCGGGC...CCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR TCA 90 bp | ATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGCAGACCTATCCCGCCTaGAGTGCCAATGCGGATGAT | + |
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Preference number: 4 (lower is better) Translates to: IDLLPRSCRGFSGAERHRQTYPA*SANADD Trigger: ATCATCCGCATTGGCACTTCAGGCGGGATAGGTCTG...CCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | AGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGGCGTAGCGGTCAGTGCCTaGACAGATGTTGGGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: RFIAQELQRLLRGGKAQGVAVSA*TDVGIF Trigger: GAATATCCCAACATCTGTGCAGGCACTGACCGCTAC...GCCCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | AATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGTCAGGCCACAGGCACTaGACATGGTGGCAAACACCG | + |
|
Preference number: 4 (lower is better) Translates to: NRFIAQELQRLLRGGKAQSGHRH*TWWQTP Trigger: CGGTGTTTGCCACCATGTGCAGTGCCTGTGGCCTGA...CTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | AGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGGCTTGGAGCACCTGGCATaGTACAGCATCTTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RFIAQELQRLLRGGKAQGLEHLA*YSILMS Trigger: GCTCATCAAGATGCTGTACCATGCCAGGTGCTCCAA...GCCCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | AGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGGCAGGCACTGCACATGGTaGCAAACACCGAAGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RFIAQELQRLLRGGKAQGRHCTW*QTPKIP Trigger: TGGAATCTTCGGTGTTTGCCACCATGTGCAGTGCCT...GCCCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR TCA 90 bp | ATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGGCTCAAACTCCGGCTTaGAGCACTCATTCACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IDLLPRSCRGFSGAERHRAQTPA*STHSLP Trigger: AGGCAGTGAATGAGTGCTTCAAGCCGGAGTTTGAGC...CCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR TCA 90 bp | ATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGGAACTCATTCAGGTCTaGGGAGCACTGCACCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: IDLLPRSCRGFSGAERHRELIQV*GALHQL Trigger: GAGTTGGTGCAGTGCTCCTCAGACCTGAATGAGTTC...CCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | AATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGTGGCGTAGCGGTCAGTaGCTGCACAGATGTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NRFIAQELQRLLRGGKAQWRSGQ*LHRCWD Trigger: ATCCCAACATCTGTGCAGGCACTGACCGCTACGCCA...CTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | ATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGCGTCCAGGTTGGTGTTaGGAATCACCCGTTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IDLLPRSCRGFSGAERHRRPGWC*ESPVFP Trigger: TGGGAAAACGGGTGATTCGCAACACCAACCTGGACG...CCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | AAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACTCAGGCCACAGGCACTaGACATGGTGGCAAACACCG | + |
|
Preference number: 4 (lower is better) Translates to: KIDLLPRSCRGFSGAERHSGHRH*TWWQTP Trigger: CGGTGTTTGCCACCATGTGCAGTGCCTGTGGCCTGA...GTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | ATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGTATTCCTTCCCTGGATaGTCAAGGCCCAGCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IDLLPRSCRGFSGAERHRYSFPG*SRPSSA Trigger: TGCAGAGCTGGGCCTTGACCATCCAGGGAAGGAATA...CCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | AAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACGCCCGGCTTTATACATaGCGTAGCGGTCAGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KIDLLPRSCRGFSGAERHARLYT*RSGQCL Trigger: CAGGCACTGACCGCTACGCCATGTATAAAGCCGGGC...GTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | ATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGCTCTTCTTGATGAAGTaGCCCACTAGCCGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IDLLPRSCRGFSGAERHRLFLMK*PTSRCG Trigger: ACCACAGCGGCTAGTGGGCCACTTCATCAAGAAGAG...CCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR TCA 90 bp | AATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGAACTCATTCAGGTCTaGGGAGCACTGCACCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: NRFIAQELQRLLRGGKAQELIQV*GALHQL Trigger: GAGTTGGTGCAGTGCTCCTCAGACCTGAATGAGTTC...CTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | AAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACTGGCGTAGCGGTCAGTaGCTGCACAGATGTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KIDLLPRSCRGFSGAERHWRSGQ*LHRCWD Trigger: ATCCCAACATCTGTGCAGGCACTGACCGCTACGCCA...GTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | AAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACTGCCGATGGAAGGAATaGCCATGCCATGGCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KIDLLPRSCRGFSGAERHCRWKE*PCHGSQ Trigger: CTGTGAGCCATGGCATGGGCATTCCTTCCATCGGCA...GTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | AAAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCATCAGGCCACAGGCACTaGACATGGTGGCAAACACCG | + |
|
Preference number: 4 (lower is better) Translates to: KNRFIAQELQRLLRGGKASGHRH*TWWQTP Trigger: CGGTGTTTGCCACCATGTGCAGTGCCTGTGGCCTGA...TGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | ATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGTTGGAGCACCTGGCATaGTACAGCATCTTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IDLLPRSCRGFSGAERHRLEHLA*YSILMS Trigger: GCTCATCAAGATGCTGTACCATGCCAGGTGCTCCAA...CCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | AATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGAGTCCAAGGTGCACATaGTGTTGCCCACAACCATGG | + |
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Preference number: 4 (lower is better) Translates to: NRFIAQELQRLLRGGKAQSPRCT*CCPQPW Trigger: CCATGGTTGTGGGCAACACCATGTGCACCTTGGACT...CTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | ATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGAGGCACTGCACATGGTaGCAAACACCGAAGATTCCA | + |
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Preference number: 4 (lower is better) Translates to: IDLLPRSCRGFSGAERHRRHCTW*QTPKIP Trigger: TGGAATCTTCGGTGTTTGCCACCATGTGCAGTGCCT...CCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR TCA 90 bp | AAAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGACCTATCCCGCCTaGAGTGCCAATGCGGATGAT | + |
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Preference number: 4 (lower is better) Translates to: KNRFIAQELQRLLRGGKAQTYPA*SANADD Trigger: ATCATCCGCATTGGCACTTCAGGCGGGATAGGTCTG...TGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | AAAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCATGCCGATGGAAGGAATaGCCATGCCATGGCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: KNRFIAQELQRLLRGGKACRWKE*PCHGSQ Trigger: CTGTGAGCCATGGCATGGGCATTCCTTCCATCGGCA...TGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | ATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGTTTCCCAGGACAATCTaGTCAAACTCCGGCTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: IDLLPRSCRGFSGAERHRFPRTI*SNSGLK Trigger: CTTCAAGCCGGAGTTTGAGCAGATTGTCCTGGGAAA...CCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | AAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGCCGCTGTGGTCTCTaGTGGTATTCCACAAGCACA | + |
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Preference number: 4 (lower is better) Translates to: KIDLLPRSCRGFSGAERHSRCGL*WYSTST Trigger: TGTGCTTGTGGAATACCAGCAGAGACCACAGCGGCT...GTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | AAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACTATTCCTTCCCTGGATaGTCAAGGCCCAGCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KIDLLPRSCRGFSGAERHYSFPG*SRPSSA Trigger: TGCAGAGCTGGGCCTTGACCATCCAGGGAAGGAATA...GTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | AATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGAGGCACTGCACATGGTaGCAAACACCGAAGATTCCA | + |
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Preference number: 4 (lower is better) Translates to: NRFIAQELQRLLRGGKAQRHCTW*QTPKIP Trigger: TGGAATCTTCGGTGTTTGCCACCATGTGCAGTGCCT...CTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | AATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGCACAGGCACTGCACATaGTGGCAAACACCGAAGATT | + |
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Preference number: 4 (lower is better) Translates to: NRFIAQELQRLLRGGKAQHRHCT*WQTPKI Trigger: AATCTTCGGTGTTTGCCACCATGTGCAGTGCCTGTG...CTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | AAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACCTCTTCTTGATGAAGTaGCCCACTAGCCGCTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: KIDLLPRSCRGFSGAERHLFLMK*PTSRCG Trigger: ACCACAGCGGCTAGTGGGCCACTTCATCAAGAAGAG...GTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR TCA 90 bp | AGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGGCTGCTATGTTTGGATTTaGAAGTTGGATGAAGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: RFIAQELQRLLRGGKAQGCYVWI*KLDEAV Trigger: GACTGCTTCATCCAACTTTCAAATCCAAACATAGCA...GCCCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | ATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGGTTTTCAAGGTCCTTTaGTTCAGTTCCTGTAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: IDLLPRSCRGFSGAERHRVFKVL*FSSCSC Trigger: GCAGCTACAGGAACTGAAGCAAAGGACCTTGAAAAC...CCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | AAAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACGTCCAGGTTGGTGTTaGGAATCACCCGTTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: KNRFIAQELQRLLRGGKARPGWC*ESPVFP Trigger: TGGGAAAACGGGTGATTCGCAACACCAACCTGGACG...TGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | AATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGCATAGAAGTCCAAGGTaGACATGGTGTTGCCCACAA | + |
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Preference number: 4 (lower is better) Translates to: NRFIAQELQRLLRGGKAQHRSPR*TWCCPQ Trigger: TTGTGGGCAACACCATGTGCACCTTGGACTTCTATG...CTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | AAAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCAAGCCGCTGTGGTCTCTaGTGGTATTCCACAAGCACA | + |
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Preference number: 4 (lower is better) Translates to: KNRFIAQELQRLLRGGKASRCGL*WYSTST Trigger: TGTGCTTGTGGAATACCAGCAGAGACCACAGCGGCT...TGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | AAAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCATATTCCTTCCCTGGATaGTCAAGGCCCAGCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KNRFIAQELQRLLRGGKAYSFPG*SRPSSA Trigger: TGCAGAGCTGGGCCTTGACCATCCAGGGAAGGAATA...TGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | AAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACTTGGAGCACCTGGCATaGTACAGCATCTTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIDLLPRSCRGFSGAERHLEHLA*YSILMS Trigger: GCTCATCAAGATGCTGTACCATGCCAGGTGCTCCAA...GTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR CCA 90 bp | AAAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCAAGTCCAAGGTGCACATaGTGTTGCCCACAACCATGG | + |
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Preference number: 4 (lower is better) Translates to: KNRFIAQELQRLLRGGKASPRCT*CCPQPW Trigger: CCATGGTTGTGGGCAACACCATGTGCACCTTGGACT...TGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS-3UTR GCA 90 bp | AATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGTTTTCAAGGTCCTTTaGTTCAGTTCCTGTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NRFIAQELQRLLRGGKAQVFKVL*FSSCSC Trigger: GCAGCTACAGGAACTGAAGCAAAGGACCTTGAAAAC...CTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR GCA 90 bp | AAAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCAGTAGCGGTCAGTGCCTaGACAGATGTTGGGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: KNRFIAQELQRLLRGGKAVAVSA*TDVGIF Trigger: GAATATCCCAACATCTGTGCAGGCACTGACCGCTAC...TGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR GCA 90 bp | AAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACTTTCCCAGGACAATCTaGTCAAACTCCGGCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KIDLLPRSCRGFSGAERHFPRTI*SNSGLK Trigger: CTTCAAGCCGGAGTTTGAGCAGATTGTCCTGGGAAA...GTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR GCA 90 bp | AAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACCATAGAAGTCCAAGGTaGACATGGTGTTGCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: KIDLLPRSCRGFSGAERHHRSPR*TWCCPQ Trigger: TTGTGGGCAACACCATGTGCACCTTGGACTTCTATG...GTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR CCA 90 bp | AAAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACACAGGCACTGCACATaGTGGCAAACACCGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: KNRFIAQELQRLLRGGKAHRHCT*WQTPKI Trigger: AATCTTCGGTGTTTGCCACCATGTGCAGTGCCTGTG...TGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR GCA 90 bp | AAAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCATTTCCCAGGACAATCTaGTCAAACTCCGGCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KNRFIAQELQRLLRGGKAFPRTI*SNSGLK Trigger: CTTCAAGCCGGAGTTTGAGCAGATTGTCCTGGGAAA...TGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR GCA 90 bp | AAAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACATAGAAGTCCAAGGTaGACATGGTGTTGCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: KNRFIAQELQRLLRGGKAHRSPR*TWCCPQ Trigger: TTGTGGGCAACACCATGTGCACCTTGGACTTCTATG...TGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR GCA 90 bp | AAAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCAGTTTTCAAGGTCCTTTaGTTCAGTTCCTGTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KNRFIAQELQRLLRGGKAVFKVL*FSSCSC Trigger: GCAGCTACAGGAACTGAAGCAAAGGACCTTGAAAAC...TGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR TCA 90 bp | AAAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCATGCTATGTTTGGATTTaGAAGTTGGATGAAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KNRFIAQELQRLLRGGKACYVWI*KLDEAV Trigger: GACTGCTTCATCCAACTTTCAAATCCAAACATAGCA...TGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS TCA 90 bp | GGTGCACATGGTGTTGCCCACAACCATGGGGAACTCATTCAGGTCTaGGGAGCACTGCACCAACTCCTGAACCAGCTGCGCGTCCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GAHGVAHNHGELIQV*GALHQLLNQLRVQV Trigger: AACCTGGACGCGCAGCTGGTTCAGGAGTTGGTGCAGTGCTCCTCAGACCTGAATGAGTTCCCCATGGTTGTGGGCAACACCATGTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS GCA 90 bp | AGACAGCACGGGCCCGGCTTTATACATGGCGTAGCGGTCAGTGCCTaGACAGATGTTGGGATATTCCTTCCCTGGATGGTCAAGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RQHGPGFIHGVAVSA*TDVGIFLPWMVKAQ Trigger: CTGGGCCTTGACCATCCAGGGAAGGAATATCCCAACATCTGTGCAGGCACTGACCGCTACGCCATGTATAAAGCCGGGCCCGTGCTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000130522.8 ENSMUST00000164791.8 ENSMUST00000166455.2 ENSMUST00000170444.8 ENSMUST00000172452.8 |
||
| CDS CCA 90 bp | TGCCCATGCCATGGCTCACAGACAGCACGGGCCCGGCTTTATACATaGCGTAGCGGTCAGTGCCTGCACAGATGTTGGGATATTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPCHGSQTARARLYT*RSGQCLHRCWDIPS Trigger: GGAAGGAATATCCCAACATCTGTGCAGGCACTGACCGCTACGCCATGTATAAAGCCGGGCCCGTGCTGTCTGTGAGCCATGGCATGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000130522.8 ENSMUST00000164791.8 ENSMUST00000170444.8 ENSMUST00000172452.8 |
||
| CDS CCA 90 bp | CGCCATCCAGACGGCCTTGCCCCTCATAGAAGTCCAAGGTGCACATaGTGTTGCCCACAACCATGGGGAACTCATTCAGGTCTGAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RHPDGLAPHRSPRCT*CCPQPWGTHSGLRS Trigger: GCTCCTCAGACCTGAATGAGTTCCCCATGGTTGTGGGCAACACCATGTGCACCTTGGACTTCTATGAGGGGCAAGGCCGTCTGGATGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS CCA 90 bp | CCCACTAGCCGCTGTGGTCTCTGCTGGTATTCCACAAGCACATCGTaGGGAGTGTTGATCTGGTCTCCTTGCAGACGGTCCAGAAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PTSRCGLCWYSTSTS*GVLIWSPCRRSRRV Trigger: CACCCTTCTGGACCGTCTGCAAGGAGACCAGATCAACACTCCCCACGATGTGCTTGTGGAATACCAGCAGAGACCACAGCGGCTAGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR CAA 90 bp | AGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGGCAAGGTGCACATGGTGTaGCCCACAACCATGGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RFIAQELQRLLRGGKAQGKVHMV*PTTMGN Trigger: GTTCCCCATGGTTGTGGGCAACACCATGTGCACCTT...GCCCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS GCA 90 bp | TCACAGACAGCACGGGCCCGGCTTTATACATGGCGTAGCGGTCAGTaGCTGCACAGATGTTGGGATATTCCTTCCCTGGATGGTCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SQTARARLYTWRSGQ*LHRCWDIPSLDGQG Trigger: GCCTTGACCATCCAGGGAAGGAATATCCCAACATCTGTGCAGGCACTGACCGCTACGCCATGTATAAAGCCGGGCCCGTGCTGTCTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000130522.8 ENSMUST00000164791.8 ENSMUST00000170444.8 ENSMUST00000172452.8 |
||
| CDS GCA 90 bp | AGCACTGCACCAACTCCTGAACCAGCTGCGCGTCCAGGTTGGTGTTaGGAATCACCCGTTTTCCCAGGACAATCTGCTCAAACTCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: STAPTPEPAARPGWC*ESPVFPGQSAQTPA Trigger: AGCCGGAGTTTGAGCAGATTGTCCTGGGAAAACGGGTGATTCGCAACACCAACCTGGACGCGCAGCTGGTTCAGGAGTTGGTGCAGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS GCA 90 bp | CCAGACGGCCTTGCCCCTCATAGAAGTCCAAGGTGCACATGGTGTTaGCCACAACCATGGGGAACTCATTCAGGTCTGAGGAGCACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PDGLAPHRSPRCTWC*PQPWGTHSGLRSTA Trigger: TGCAGTGCTCCTCAGACCTGAATGAGTTCCCCATGGTTGTGGGCAACACCATGTGCACCTTGGACTTCTATGAGGGGCAAGGCCGTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS GCA 90 bp | CATGAGACAGCACGGGCCCGGCTTTATACATGGCGTAGCGGTCAGTaGCTGCACAGATGTTGGGATATTCCTTCCCTGGATGGTCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HETARARLYTWRSGQ*LHRCWDIPSLDGQG Trigger: GCCTTGACCATCCAGGGAAGGAATATCCCAACATCTGTGCAGGCACTGACCGCTACGCCATGTATAAAGCCGGGCCCGTGCTGTCTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166455.2 |
||
| CDS CCA 90 bp | GGTCTCTGCTGGTATTCCACAAGCACATCGTGGGGAGTGTTGATCTaGTCTCCTTGCAGACGGTCCAGAAGGGTGACACACACCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLCWYSTSTSWGVLI*SPCRRSRRVTHTTA Trigger: GGCTGTGGTGTGTGTCACCCTTCTGGACCGTCTGCAAGGAGACCAGATCAACACTCCCCACGATGTGCTTGTGGAATACCAGCAGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS GCA 90 bp | AGGACAATCTGCTCAAACTCCGGCTTGAAGCACTCATTCACTGCCTaGTGCGTGATGACAACAGAGCCAGGCTCCAGACCTATCCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RTICSNSGLKHSFTA*CVMTTEPGSRPIPP Trigger: AGGCGGGATAGGTCTGGAGCCTGGCTCTGTTGTCATCACGCAGCAGGCAGTGAATGAGTGCTTCAAGCCGGAGTTTGAGCAGATTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS GCA 90 bp | GCGTCCAGGTTGGTGTTGCGAATCACCCGTTTTCCCAGGACAATCTaGTCAAACTCCGGCTTGAAGCACTCATTCACTGCCTGCTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASRLVLRITRFPRTI*SNSGLKHSFTACCV Trigger: CACGCAGCAGGCAGTGAATGAGTGCTTCAAGCCGGAGTTTGAGCAGATTGTCCTGGGAAAACGGGTGATTCGCAACACCAACCTGGACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS GCA 90 bp | TGGTATTCCACAAGCACATCGTGGGGAGTGTTGATCTGGTCTCCTTaGAGACGGTCCAGAAGGGTGACACACACCACAGCCGCTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WYSTSTSWGVLIWSP*RRSRRVTHTTAAFR Trigger: CCTGAAAGCGGCTGTGGTGTGTGTCACCCTTCTGGACCGTCTGCAAGGAGACCAGATCAACACTCCCCACGATGTGCTTGTGGAATACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS GCA 90 bp | CCCAGGCTCTTCTTGATGAAGTGGCCCACTAGCCGCTGTGGTCTCTaGTGGTATTCCACAAGCACATCGTGGGGAGTGTTGATCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PRLFLMKWPTSRCGL*WYSTSTSWGVLIWS Trigger: AGACCAGATCAACACTCCCCACGATGTGCTTGTGGAATACCAGCAGAGACCACAGCGGCTAGTGGGCCACTTCATCAAGAAGAGCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS CCA 90 bp | CTGAGGAGCACTGCACCAACTCCTGAACCAGCTGCGCGTCCAGGTTaGTGTTGCGAATCACCCGTTTTCCCAGGACAATCTGCTCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: LRSTAPTPEPAARPG*CCESPVFPGQSAQT Trigger: AGTTTGAGCAGATTGTCCTGGGAAAACGGGTGATTCGCAACACCAACCTGGACGCGCAGCTGGTTCAGGAGTTGGTGCAGTGCTCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS CCA 90 bp | AAGGAATGCCCATGCCATGAGACAGCACGGGCCCGGCTTTATACATaGCGTAGCGGTCAGTGCCTGCACAGATGTTGGGATATTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KECPCHETARARLYT*RSGQCLHRCWDIPS Trigger: GGAAGGAATATCCCAACATCTGTGCAGGCACTGACCGCTACGCCATGTATAAAGCCGGGCCCGTGCTGTCTCATGGCATGGGCATTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166455.2 |
||
| CDS-3UTR CAA 90 bp | ATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGCGGATGATGGTGATGTaGGAGCACCTGGCATGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: IDLLPRSCRGFSGAERHRRMMVM*EHLAWY Trigger: GTACCATGCCAGGTGCTCCAACATCACCATCATCCG...CCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR CAA 90 bp | ATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGAAGGTGCACATGGTGTaGCCCACAACCATGGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: IDLLPRSCRGFSGAERHRKVHMV*PTTMGN Trigger: GTTCCCCATGGTTGTGGGCAACACCATGTGCACCTT...CCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS GCA 90 bp | ACAATCTGCTCAAACTCCGGCTTGAAGCACTCATTCACTGCCTGCTaGGTGATGACAACAGAGCCAGGCTCCAGACCTATCCCGCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TICSNSGLKHSFTAC*VMTTEPGSRPIPPE Trigger: TTCAGGCGGGATAGGTCTGGAGCCTGGCTCTGTTGTCATCACGCAGCAGGCAGTGAATGAGTGCTTCAAGCCGGAGTTTGAGCAGATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS CCA 90 bp | GCCCCTCATAGAAGTCCAAGGTGCACATGGTGTTGCCCACAACCATaGGGAACTCATTCAGGTCTGAGGAGCACTGCACCAACTCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: APHRSPRCTWCCPQP*GTHSGLRSTAPTPE Trigger: TTCAGGAGTTGGTGCAGTGCTCCTCAGACCTGAATGAGTTCCCCATGGTTGTGGGCAACACCATGTGCACCTTGGACTTCTATGAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS CCA 90 bp | AGGCTCTTCTTGATGAAGTGGCCCACTAGCCGCTGTGGTCTCTGCTaGTATTCCACAAGCACATCGTGGGGAGTGTTGATCTGGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLFLMKWPTSRCGLC*YSTSTSWGVLIWSP Trigger: AGGAGACCAGATCAACACTCCCCACGATGTGCTTGTGGAATACCAGCAGAGACCACAGCGGCTAGTGGGCCACTTCATCAAGAAGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR CAA 90 bp | ATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGTGCTCAAACTCCGGCTaGAAGCACTCATTCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IDLLPRSCRGFSGAERHRCSNSG*KHSFTA Trigger: GGCAGTGAATGAGTGCTTCAAGCCGGAGTTTGAGCA...CCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR CAA 90 bp | AGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGGCGCACGTCTTCCTTCATaGCTGCTATGTTTGGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: RFIAQELQRLLRGGKAQGARLPS*LLCLDL Trigger: CAAATCCAAACATAGCAGCAATGAAGGAAGACGTGC...GCCCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR CAA 90 bp | AATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGTGCTCAAACTCCGGCTaGAAGCACTCATTCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: NRFIAQELQRLLRGGKAQCSNSG*KHSFTA Trigger: GGCAGTGAATGAGTGCTTCAAGCCGGAGTTTGAGCA...CTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR CAA 90 bp | AAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAAGGTGCACATGGTGTaGCCCACAACCATGGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KIDLLPRSCRGFSGAERHKVHMV*PTTMGN Trigger: GTTCCCCATGGTTGTGGGCAACACCATGTGCACCTT...GTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS GCA 90 bp | CACCGAAGATTCCATCTCGATATTTCGGACACCCGCGGCATGGGCTaGACGCAGATAAGACTGTTTGTCTTTCTCTGTGTAGGAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HRRFHLDISDTRGMG*TQIRLFVFLCVGAE Trigger: CTCTGCTCCTACACAGAGAAAGACAAACAGTCTTATCTGCGTGCAGCCCATGCCGCGGGTGTCCGAAATATCGAGATGGAATCTTCGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS CCA 90 bp | CCTGAAGTGCCAATGCGGATGATGGTGATGTTGGAGCACCTGGCATaGTACAGCATCTTGATGAGCTCGTGCAACATGATGCCGATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PEVPMRMMVMLEHLA*YSILMSSCNMMPME Trigger: TTCCATCGGCATCATGTTGCACGAGCTCATCAAGATGCTGTACCATGCCAGGTGCTCCAACATCACCATCATCCGCATTGGCACTTCAGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 ENSMUST00000166455.2 ENSMUST00000170444.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACGGATGATGGTGATGTaGGAGCACCTGGCATGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: KNRFIAQELQRLLRGGKARMMVM*EHLAWY Trigger: GTACCATGCCAGGTGCTCCAACATCACCATCATCCG...TGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR CAA 90 bp | ATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACAGGGCACGTCTTCCTTCATaGCTGCTATGTTTGGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: IDLLPRSCRGFSGAERHRARLPS*LLCLDL Trigger: CAAATCCAAACATAGCAGCAATGAAGGAAGACGTGC...CCTGTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS-3UTR CAA 90 bp | AAAATAGATTTATTGCCCAGGAGTTGCAGAGGCTTCTCCGGGGCGGAAAGGCACGCACGTCTTCCTTCATaGCTGCTATGTTTGGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: KIDLLPRSCRGFSGAERHARLPS*LLCLDL Trigger: CAAATCCAAACATAGCAGCAATGAAGGAAGACGTGC...GTGCCTTTCCGCCCCGGAGAAGCCTCTGCAACTCCTGGGCAATAAATCTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
||
| CDS TCA 90 bp | GAAATGGTAGAGCACGTCTTCCTTCATTGCTGCTATGTTTGGATTTaGAAGTTGGATGAAGCAGTCATTGTGATGGTTTTCAAGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EMVEHVFLHCCYVWI*KLDEAVIVMVFKVL Trigger: AAGGACCTTGAAAACCATCACAATGACTGCTTCATCCAACTTTCAAATCCAAACATAGCAGCAATGAAGGAAGACGTGCTCTACCATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000130522.8 ENSMUST00000164791.8 ENSMUST00000170444.8 ENSMUST00000172452.8 |
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| CDS CCA 72 bp | CATGGCTCACAGACAGCACGGGCCCGGCTTTATACATaGCGTAGCGGTCAGTGCCTGCACAGATGTTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: HGSQTARARLYT*RSGQCLHRCWD Trigger: ATCCCAACATCTGTGCAGGCACTGACCGCTACGCCATGTATAAAGCCGGGCCCGTGCTGTCTGTGAGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000130522.8 ENSMUST00000164791.8 ENSMUST00000170444.8 ENSMUST00000172452.8 |
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| CDS CCA 72 bp | CCATGCCATGAGACAGCACGGGCCCGGCTTTATACATaGCGTAGCGGTCAGTGCCTGCACAGATGTTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: PCHETARARLYT*RSGQCLHRCWD Trigger: ATCCCAACATCTGTGCAGGCACTGACCGCTACGCCATGTATAAAGCCGGGCCCGTGCTGTCTCATGGCATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166455.2 |
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| CDS CAA 90 bp | CGCTGTGGTCTCTGCTGGTATTCCACAAGCACATCGTGGGGAGTGTaGATCTGGTCTCCTTGCAGACGGTCCAGAAGGGTGACACACACC | + |
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Preference number: 6 (lower is better) Translates to: RCGLCWYSTSTSWGV*IWSPCRRSRRVTHT Trigger: GGTGTGTGTCACCCTTCTGGACCGTCTGCAAGGAGACCAGATCAACACTCCCCACGATGTGCTTGTGGAATACCAGCAGAGACCACAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS GCA 72 bp | GGGCCCGGCTTTATACATGGCGTAGCGGTCAGTGCCTaGACAGATGTTGGGATATTCCTTCCCTGGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: GPGFIHGVAVSA*TDVGIFLPWMV Trigger: GACCATCCAGGGAAGGAATATCCCAACATCTGTGCAGGCACTGACCGCTACGCCATGTATAAAGCCGGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000130522.8 ENSMUST00000164791.8 ENSMUST00000166455.2 ENSMUST00000170444.8 ENSMUST00000172452.8 |
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| CDS GCA 72 bp | ACAAGCACATCGTGGGGAGTGTTGATCTGGTCTCCTTaGAGACGGTCCAGAAGGGTGACACACACCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: TSTSWGVLIWSP*RRSRRVTHTTA Trigger: GGCTGTGGTGTGTGTCACCCTTCTGGACCGTCTGCAAGGAGACCAGATCAACACTCCCCACGATGTGCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS CCA 72 bp | CGCTGTGGTCTCTGCTGGTATTCCACAAGCACATCGTaGGGAGTGTTGATCTGGTCTCCTTGCAGACGGTCC | + |
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Preference number: 6 (lower is better) Translates to: RCGLCWYSTSTS*GVLIWSPCRRS Trigger: GGACCGTCTGCAAGGAGACCAGATCAACACTCCCCACGATGTGCTTGTGGAATACCAGCAGAGACCACAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS CAA 72 bp | CACAAGCACATCGTGGGGAGTGTTGATCTGGTCTCCTaGCAGACGGTCCAGAAGGGTGACACACACCACAGC | + |
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Preference number: 6 (lower is better) Translates to: HKHIVGSVDLVS*QTVQKGDTHHS Trigger: GCTGTGGTGTGTGTCACCCTTCTGGACCGTCTGCAAGGAGACCAGATCAACACTCCCCACGATGTGCTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS CAA 90 bp | CTGGTATTCCACAAGCACATCGTGGGGAGTGTTGATCTGGTCTCCTaGCAGACGGTCCAGAAGGGTGACACACACCACAGCCGCTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: LVFHKHIVGSVDLVS*QTVQKGDTHHSRFQ Trigger: CTGAAAGCGGCTGTGGTGTGTGTCACCCTTCTGGACCGTCTGCAAGGAGACCAGATCAACACTCCCCACGATGTGCTTGTGGAATACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS TCA 72 bp | GATGACAACAGAGCCAGGCTCCAGACCTATCCCGCCTaGAGTGCCAATGCGGATGATGGTGATGTTGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: DDNRARLQTYPA*SANADDGDVGA Trigger: TGCTCCAACATCACCATCATCCGCATTGGCACTTCAGGCGGGATAGGTCTGGAGCCTGGCTCTGTTGTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 ENSMUST00000166455.2 |
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| CDS TCA 72 bp | AACTCATTCAGGTCTGAGGAGCACTGCACCAACTCCTaGACCAGCTGCGCGTCCAGGTTGGTGTTGCGAATC | + |
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Preference number: 6 (lower is better) Translates to: NSFRSEEHCTNS*TSCASRLVLRI Trigger: GATTCGCAACACCAACCTGGACGCGCAGCTGGTTCAGGAGTTGGTGCAGTGCTCCTCAGACCTGAATGAGTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS GCA 72 bp | CATCCAGACGGCCTTGCCCCTCATAGAAGTCCAAGGTaGACATGGTGTTGCCCACAACCATGGGGAACTCAT | + |
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Preference number: 6 (lower is better) Translates to: HPDGLAPHRSPR*TWCCPQPWGTH Trigger: ATGAGTTCCCCATGGTTGTGGGCAACACCATGTGCACCTTGGACTTCTATGAGGGGCAAGGCCGTCTGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS CCA 72 bp | ACTGCACCAACTCCTGAACCAGCTGCGCGTCCAGGTTaGTGTTGCGAATCACCCGTTTTCCCAGGACAATCT | + |
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Preference number: 6 (lower is better) Translates to: TAPTPEPAARPG*CCESPVFPGQS Trigger: AGATTGTCCTGGGAAAACGGGTGATTCGCAACACCAACCTGGACGCGCAGCTGGTTCAGGAGTTGGTGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS CCA 72 bp | GACGGCCTTGCCCCTCATAGAAGTCCAAGGTGCACATaGTGTTGCCCACAACCATGGGGAACTCATTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: DGLAPHRSPRCT*CCPQPWGTHSG Trigger: ACCTGAATGAGTTCCCCATGGTTGTGGGCAACACCATGTGCACCTTGGACTTCTATGAGGGGCAAGGCCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS CAA 72 bp | CCTGGATGGTCAAGGCCCAGCTCTGCAGCCACATACTaGATGAAGGTGTTCATCCGGGAAGAGCTTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: PGWSRPSSAATY*MKVFIREELPP Trigger: TGGTGGAAGCTCTTCCCGGATGAACACCTTCATCAAGTATGTGGCTGCAGAGCTGGGCCTTGACCATCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000130522.8 ENSMUST00000164791.8 ENSMUST00000166455.2 ENSMUST00000170444.8 ENSMUST00000172452.8 |
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| CDS CAA 90 bp | TCCAGACCTATCCCGCCTGAAGTGCCAATGCGGATGATGGTGATGTaGGAGCACCTGGCATGGTACAGCATCTTGATGAGCTCGTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: SRPIPPEVPMRMMVM*EHLAWYSILMSSCN Trigger: GTTGCACGAGCTCATCAAGATGCTGTACCATGCCAGGTGCTCCAACATCACCATCATCCGCATTGGCACTTCAGGCGGGATAGGTCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 ENSMUST00000166455.2 ENSMUST00000170444.8 |
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| CDS GCA 72 bp | TCAAACTCCGGCTTGAAGCACTCATTCACTGCCTGCTaGGTGATGACAACAGAGCCAGGCTCCAGACCTATC | + |
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Preference number: 6 (lower is better) Translates to: SNSGLKHSFTAC*VMTTEPGSRPI Trigger: GATAGGTCTGGAGCCTGGCTCTGTTGTCATCACGCAGCAGGCAGTGAATGAGTGCTTCAAGCCGGAGTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS GCA 72 bp | AATCTGCTCAAACTCCGGCTTGAAGCACTCATTCACTaGCTGCTGCGTGATGACAACAGAGCCAGGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: NLLKLRLEALIH*LLRDDNRARLQ Trigger: CTGGAGCCTGGCTCTGTTGTCATCACGCAGCAGGCAGTGAATGAGTGCTTCAAGCCGGAGTTTGAGCAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS GCA 72 bp | CTTGCCCCTCATAGAAGTCCAAGGTGCACATGGTGTTaGCCACAACCATGGGGAACTCATTCAGGTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LAPHRSPRCTWC*PQPWGTHSGLR Trigger: CCTCAGACCTGAATGAGTTCCCCATGGTTGTGGGCAACACCATGTGCACCTTGGACTTCTATGAGGGGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS GCA 72 bp | TTCTTGATGAAGTGGCCCACTAGCCGCTGTGGTCTCTaGTGGTATTCCACAAGCACATCGTGGGGAGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: FLMKWPTSRCGL*WYSTSTSWGVL Trigger: CAACACTCCCCACGATGTGCTTGTGGAATACCAGCAGAGACCACAGCGGCTAGTGGGCCACTTCATCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS CCA 72 bp | TATACATGGCGTAGCGGTCAGTGCCTGCACAGATGTTaGGATATTCCTTCCCTGGATGGTCAAGGCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: YTWRSGQCLHRC*DIPSLDGQGPA Trigger: AGCTGGGCCTTGACCATCCAGGGAAGGAATATCCCAACATCTGTGCAGGCACTGACCGCTACGCCATGTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000130522.8 ENSMUST00000164791.8 ENSMUST00000166455.2 ENSMUST00000170444.8 ENSMUST00000172452.8 |
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| CDS CCA 72 bp | AGAAGTCCAAGGTGCACATGGTGTTGCCCACAACCATaGGGAACTCATTCAGGTCTGAGGAGCACTGCACCA | + |
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Preference number: 6 (lower is better) Translates to: RSPRCTWCCPQP*GTHSGLRSTAP Trigger: TGGTGCAGTGCTCCTCAGACCTGAATGAGTTCCCCATGGTTGTGGGCAACACCATGTGCACCTTGGACTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS CCA 72 bp | TGGTATTCCACAAGCACATCGTGGGGAGTGTTGATCTaGTCTCCTTGCAGACGGTCCAGAAGGGTGACACAC | + |
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Preference number: 6 (lower is better) Translates to: WYSTSTSWGVLI*SPCRRSRRVTH Trigger: GTGTGTCACCCTTCTGGACCGTCTGCAAGGAGACCAGATCAACACTCCCCACGATGTGCTTGTGGAATACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS CAA 72 bp | ATCCCGCCTGAAGTGCCAATGCGGATGATGGTGATGTaGGAGCACCTGGCATGGTACAGCATCTTGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: IPPEVPMRMMVM*EHLAWYSILMS Trigger: GCTCATCAAGATGCTGTACCATGCCAGGTGCTCCAACATCACCATCATCCGCATTGGCACTTCAGGCGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 ENSMUST00000166455.2 ENSMUST00000170444.8 |
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| CDS CAA 72 bp | ACCCGTTTTCCCAGGACAATCTGCTCAAACTCCGGCTaGAAGCACTCATTCACTGCCTGCTGCGTGATGACA | + |
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Preference number: 6 (lower is better) Translates to: TRFPRTICSNSG*KHSFTACCVMT Trigger: TGTCATCACGCAGCAGGCAGTGAATGAGTGCTTCAAGCCGGAGTTTGAGCAGATTGTCCTGGGAAAACGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS CAA 90 bp | TATTCCTTCCCTGGATGGTCAAGGCCCAGCTCTGCAGCCACATACTaGATGAAGGTGTTCATCCGGGAAGAGCTTCCACCAACACACACA | + |
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Preference number: 6 (lower is better) Translates to: YSFPGWSRPSSAATY*MKVFIREELPPTHT Trigger: TGTGTGTGTTGGTGGAAGCTCTTCCCGGATGAACACCTTCATCAAGTATGTGGCTGCAGAGCTGGGCCTTGACCATCCAGGGAAGGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000130522.8 ENSMUST00000164791.8 ENSMUST00000166455.2 ENSMUST00000170444.8 ENSMUST00000172452.8 |
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| CDS CAA 90 bp | ATGCGGATGATGGTGATGTTGGAGCACCTGGCATGGTACAGCATCTaGATGAGCTCGTGCAACATGATGCCGATGGAAGGAATGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: MRMMVMLEHLAWYSI*MSSCNMMPMEGMPM Trigger: CATGGGCATTCCTTCCATCGGCATCATGTTGCACGAGCTCATCAAGATGCTGTACCATGCCAGGTGCTCCAACATCACCATCATCCGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 ENSMUST00000166455.2 ENSMUST00000170444.8 |
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| CDS CAA 90 bp | TTGCGAATCACCCGTTTTCCCAGGACAATCTGCTCAAACTCCGGCTaGAAGCACTCATTCACTGCCTGCTGCGTGATGACAACAGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LRITRFPRTICSNSG*KHSFTACCVMTTEP Trigger: TGGCTCTGTTGTCATCACGCAGCAGGCAGTGAATGAGTGCTTCAAGCCGGAGTTTGAGCAGATTGTCCTGGGAAAACGGGTGATTCGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS GCA 72 bp | TTGGTGTTGCGAATCACCCGTTTTCCCAGGACAATCTaGTCAAACTCCGGCTTGAAGCACTCATTCACTGCC | + |
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Preference number: 6 (lower is better) Translates to: LVLRITRFPRTI*SNSGLKHSFTA Trigger: GGCAGTGAATGAGTGCTTCAAGCCGGAGTTTGAGCAGATTGTCCTGGGAAAACGGGTGATTCGCAACACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS CCA 72 bp | CCAATGCGGATGATGGTGATGTTGGAGCACCTGGCATaGTACAGCATCTTGATGAGCTCGTGCAACATGATG | + |
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Preference number: 6 (lower is better) Translates to: PMRMMVMLEHLA*YSILMSSCNMM Trigger: CATCATGTTGCACGAGCTCATCAAGATGCTGTACCATGCCAGGTGCTCCAACATCACCATCATCCGCATTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 ENSMUST00000166455.2 ENSMUST00000170444.8 |
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| CDS GCA 72 bp | TTCCATCTCGATATTTCGGACACCCGCGGCATGGGCTaGACGCAGATAAGACTGTTTGTCTTTCTCTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: FHLDISDTRGMG*TQIRLFVFLCV Trigger: TACACAGAGAAAGACAAACAGTCTTATCTGCGTGCAGCCCATGCCGCGGGTGTCCGAAATATCGAGATGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000164791.8 |
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| CDS TCA 72 bp | ATGTTTGGATTTGAAAGTTGGATGAAGCAGTCATTGTaGTGGTTTTCAAGGTCCTTTGCTTCAGTTCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: MFGFESWMKQSL*WFSRSFASVPV Trigger: TACAGGAACTGAAGCAAAGGACCTTGAAAACCATCACAATGACTGCTTCATCCAACTTTCAAATCCAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000020677.8 ENSMUST00000101525.9 ENSMUST00000130522.8 ENSMUST00000164791.8 ENSMUST00000170444.8 ENSMUST00000172452.8 |
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