RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UPF1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058301

Ensembl transcript IDs: ENSMUST00000075666.8, ENSMUST00000215817.2

Found 413 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCAAAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTaGGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTC +
Preference number: 1 (lower is better)
Translates to: SKTNPPAAVQAVIPG*GAQASQRCLSRKLL
Trigger: GAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR GCA 90 bp GTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTaGCTTTCCCGGAAGCTTCTCGCATCTCTCAGGTTTAACAGTCAG +
Preference number: 1 (lower is better)
Translates to: VQAVIPGCGAQASQR*LSRKLLASLRFNSQ
Trigger: CTGACTGTTAAACCTGAGAGATGCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGGATCACCGCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR GCA 90 bp CGCCTGTGGCCTCTGAAGCTCAAACTCAAAAACAAATCCTCCGGCTaGGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGGCTTCTCA +
Preference number: 1 (lower is better)
Translates to: RLWPLKLKLKNKSSG*GAGGDPRLRGSGFS
Trigger: TGAGAAGCCTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTTTGAGTTTGAGCTTCAGAGGCCACAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR CCA 90 bp CCTCGATGGGGAAGAACCCGCAGGCCGTGCTCACGAGTTCGCCTGTaGCCTCTGAAGCTCAAACTCAAAAACAAATCCTCCGGCTGCGGT +
Preference number: 1 (lower is better)
Translates to: PRWGRTRRPCSRVRL*PLKLKLKNKSSGCG
Trigger: ACCGCAGCCGGAGGATTTGTTTTTGAGTTTGAGCTTCAGAGGCCACAGGCGAACTCGTGAGCACGGCCTGCGGGTTCTTCCCCATCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR GCA 90 bp CGCTCTCTGCTCGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTaGTCACACAGTGGTGCTTCAGTTTTAGCAGTGGAAAACAGGTAT +
Preference number: 1 (lower is better)
Translates to: RSLLALAPLSSPLLG*SHSGASVLAVENRY
Trigger: ATACCTGTTTTCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCGAGCAGAGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR CCA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTaGTGCTTCAGTTTTAGCAGTGGAAAACAGGTATCCATTTATTTT +
Preference number: 1 (lower is better)
Translates to: RSRSSFLSSPRLLTQ*CFSFSSGKQVSIYF
Trigger: AAAATAAATGGATACCTGTTTTCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR-3UTR TCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGCTGCGGTGCAGGCGGTaGTCCCAGGCTGCGGGGCTC +
Preference number: 2 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRLRCRR*SQAAGL
Trigger: GAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAG...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR-3UTR GCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGCCGGCCTCGCAGCGGTaGGGGCCTCTCTCCTCTCGC +
Preference number: 2 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRPASQR*GPLSSR
Trigger: GCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGG...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR-3UTR GCA 90 bp TCCGGGGCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCCGGCCTCGCAGCGGTaGGGGCCTCTCTCCTCTCGC +
Preference number: 2 (lower is better)
Translates to: SGAGRPAMRPPPSMGKNPPASQR*GPLSSR
Trigger: GCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGG...CGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGCCCCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR-3UTR CCA 90 bp TCCGGGGCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGCGGGGCCGGTCCTaGCGAGGCCTCTCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: SGAGRPAMRPPPSMGKNPQRGRS*RGLSLW
Trigger: CCAGAGGGAGAGGCCTCGCCAGGACCGGCCCCGCTG...CGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGCCCCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR-3UTR CCA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGCGGCTGCTCACACAGTaGTGCTTCAGTTTTAGCAGT +
Preference number: 2 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRRLLTQ*CFSFSS
Trigger: ACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCG...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR-3UTR CCA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTCTCTGTCGTCCTCCCTaGCCGCTCTCTGCTCGCTCT +
Preference number: 2 (lower is better)
Translates to: APSNEASTLDGEEPAGRALCRPP*PLSARS
Trigger: AGAGCGAGCAGAGAGCGGCCAGGGAGGACGACAGAG...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR-3UTR CCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTCAGCGGGGCCGGTCCTaGCGAGGCCTCTCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRQRGRS*RGLSLW
Trigger: CCAGAGGGAGAGGCCTCGCCAGGACCGGCCCCGCTG...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR-3UTR CCA 90 bp GGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCCTCTGTCGTCCTCCCTaGCCGCTCTCTGCTCGCTCT +
Preference number: 2 (lower is better)
Translates to: GRPLGHRNAKFVLLKRSPLCRPP*PLSARS
Trigger: AGAGCGAGCAGAGAGCGGCCAGGGAGGACGACAGAG...GGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR CCA 72 bp TCCTGGCGAGGCCTCTCCCTCTGGCGGGCACGGCGCTaGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTC +
Preference number: 3 (lower is better)
Translates to: SWRGLSLWRARR*AGLAAVRASLL
Trigger: GAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGCCGTGCCCGCCAGAGGGAGAGGCCTCGCCAGGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR GCA 72 bp AATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTaGGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGG +
Preference number: 3 (lower is better)
Translates to: NPPAAVQAVIPG*GAQASQRCLSR
Trigger: CCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR CCA 72 bp ACGAGAAACAAAGAAAAAGAACAGCGGGGCCGGTCCTaGCGAGGCCTCTCCCTCTGGCGGGCACGGCGCTGG +
Preference number: 3 (lower is better)
Translates to: TRNKEKEQRGRS*RGLSLWRARRW
Trigger: CCAGCGCCGTGCCCGCCAGAGGGAGAGGCCTCGCCAGGACCGGCCCCGCTGTTCTTTTTCTTTGTTTCTCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR TCA 72 bp ACTCAAAAACAAATCCTCCGGCTGCGGTGCAGGCGGTaGTCCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCT +
Preference number: 3 (lower is better)
Translates to: TQKQILRLRCRR*SQAAGLRLLSA
Trigger: AGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTTTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR GCA 72 bp GTGATCCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTaGCTTTCCCGGAAGCTTCTCGCATCTCTCAGGTTT +
Preference number: 3 (lower is better)
Translates to: VIPGCGAQASQR*LSRKLLASLRF
Trigger: AAACCTGAGAGATGCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGGATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR TCA 72 bp CCCGCAGGCCGTGCTCACGAGTTCGCCTGTGGCCTCTaGAGCTCAAACTCAAAAACAAATCCTCCGGCTGCG +
Preference number: 3 (lower is better)
Translates to: PAGRAHEFACGL*SSNSKTNPPAA
Trigger: CGCAGCCGGAGGATTTGTTTTTGAGTTTGAGCTTCAGAGGCCACAGGCGAACTCGTGAGCACGGCCTGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR GCA 72 bp CCTCTGAAGCTCAAACTCAAAAACAAATCCTCCGGCTaGGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCA +
Preference number: 3 (lower is better)
Translates to: PLKLKLKNKSSG*GAGGDPRLRGS
Trigger: TGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTTTGAGTTTGAGCTTCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR-3UTR CAA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCACTTCCCATACTCCTTaGAAAGAATCTTTGAAGGGG +
Preference number: 3 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQATSHTP*KESLKG
Trigger: CCCCTTCAAAGATTCTTTCAAAGGAGTATGGGAAGT...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR GCA 72 bp CTCGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTaGTCACACAGTGGTGCTTCAGTTTTAGCAGTGGAA +
Preference number: 3 (lower is better)
Translates to: LALAPLSSPLLG*SHSGASVLAVE
Trigger: TTCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
3UTR CCA 72 bp GGAAGAACCCGCAGGCCGTGCTCACGAGTTCGCCTGTaGCCTCTGAAGCTCAAACTCAAAAACAAATCCTCC +
Preference number: 3 (lower is better)
Translates to: GRTRRPCSRVRL*PLKLKLKNKSS
Trigger: GGAGGATTTGTTTTTGAGTTTGAGCTTCAGAGGCCACAGGCGAACTCGTGAGCACGGCCTGCGGGTTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCGGCGGATGGGCCGGATaGCCAGCACCACCAAGCGCT +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSGGWAG*PAPPSA
Trigger: AGCGCTTGGTGGTGCTGGGCATCCGGCCCATCCGCC...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGCCGGCCCTGGCTGCTaGGGTCATAGACAGACCCGG +
Preference number: 4 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRAGPGC*GHRQTR
Trigger: CCGGGTCTGTCTATGACCGCAGCAGCCAGGGCCGGC...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CACAGGGGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCCCGGTGACCCCGCCGTaGTGGTATGCCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: HRGRPLLGAPLCRPPWPLPVTPP*WYARSP
Trigger: GGGAGAGCGGGCATACCAGCACGGCGGGGTCACCGG...GAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCCCCTGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGACTTGTGCGTCGAGCTaGCCGGCCGCGCCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRTCASS*PAAPPA
Trigger: CGCAGGCGGCGCGGCCGGCCAGCTCGACGCACAAGT...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCGCACCTGCAGGCGGATaGGCCGGATGCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSAPAGG*AGCPAP
Trigger: TGGTGCTGGGCATCCGGCCCATCCGCCTGCAGGTGC...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGGGCGTCTGCGTCTaGCTGGGAAGGGTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRGGVCV*LGRVKS
Trigger: CGACTTCACCCTTCCCAGCCAGACGCAGACGCCCCC...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
74% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCCGGCCTTCGCAGGGATaGAGCCCAGCAGGAAGACGT +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSRPSQG*SPAGRR
Trigger: ACGTCTTCCTGCTGGGCTTCATCCCTGCGAAGGCCG...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGACTGGGACAGCCCGGTaGCCCCGCCGTGCTGGTATG +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRTGTAR*PRRAGM
Trigger: CATACCAGCACGGCGGGGTCACCGGGCTGTCCCAGT...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGTCGAACTCGGAGCCCTaGGTGTCGGCGCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRSNSEP*VSAPSS
Trigger: GCTGCTCGGCGCCGACACCCAGGGCTCCGAGTTCGA...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGTCCTTCTCCCGGCCCTaGAAGGCGTCCACACTGGCA +
Preference number: 4 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRSFSRP*KASTLA
Trigger: TGCCAGTGTGGACGCCTTCCAGGGCCGGGAGAAGGA...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCGAAGGGTGGTCTGGCTaGGCCCAGGAAGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSEGWSG*AQEAQS
Trigger: GCTTTGGGCTTCCTGGGCCCAGCCAGACCACCCTTC...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGGTGACCCCGCCGTGCTaGTATGCCCGCTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRVTPPC*YARSPW
Trigger: CCAGGGAGAGCGGGCATACCAGCACGGCGGGGTCAC...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCATGCGGTATTGCACCTaGAGGCGGATGGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSMRYCT*RRMGRM
Trigger: CATCCGGCCCATCCGCCTGCAGGTGCAATACCGCAT...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGGGGGGCGTCTGCGTCTaGCTGGGAAGGGTGAAGTCG +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRGGVCV*LGRVKS
Trigger: CGACTTCACCCTTCCCAGCCAGACGCAGACGCCCCC...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
72% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCCTTGCACATCACCACTaGGCCCAGCTGGCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSLAHHH*AQLAVV
Trigger: GACCACTGCCAGCTGGGCCCAGTGGTGATGTGCAAG...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGCCAGGCTGGCTCATCTaGGAGGGCTGGCTCATGGAC +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRPGWLI*EGWLMD
Trigger: GTCCATGAGCCAGCCCTCTCAGATGAGCCAGCCTGG...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCGGACTACAGGCACCATaGACTCAGGCTCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSGLQAP*TQAQWP
Trigger: AGGCCACTGAGCCTGAGTGCATGGTGCCTGTAGTCC...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGCAGTCCGGCCTTGGCTaGCTTCTTGCACATCACCAC +
Preference number: 4 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRQSGLG*LLAHHH
Trigger: GTGGTGATGTGCAAGAAGGCAGCCAAGGCCGGACTG...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTCTGCTCCCGCCGTGCTGGTATaGCCGCTCTCCCTGGTATGT +
Preference number: 4 (lower is better)
Translates to: GRPLLGAPLCRPPWPLSAPAVLV*PLSLVC
Trigger: ACATACCAGGGAGAGCGGGCATACCAGCACGGCGGG...AGCAGAGAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGCCGGTGACCCCGCCGTaGTGGTATGCCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVPVTPP*WYARSP
Trigger: GGGAGAGCGGGCATACCAGCACGGCGGGGTCACCGG...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGTGCACTCAGGCTCAGTaGCCTGGGTGCTCTCGTCAA +
Preference number: 4 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRCTQAQ*PGCSRQ
Trigger: TTGACGAGAGCACCCAGGCCACTGAGCCTGAGTGCA...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCTGCACTCAGGCTCAGTaGCCTGGGTGCTCTCGTCAA +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSCTQAQ*PGCSRQ
Trigger: TTGACGAGAGCACCCAGGCCACTGAGCCTGAGTGCA...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTCTGCTGGGCCCAGCTGGCAGTaGTCACCGACGAGGATTAGC +
Preference number: 4 (lower is better)
Translates to: GRPLLGAPLCRPPWPLSAGPSWQ*SPTRIS
Trigger: GCTAATCCTCGTCGGTGACCACTGCCAGCTGGGCCC...AGCAGAGAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTCTGCTTTGGGAAGGGTGGTCTaGCTGGGCCCAGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GRPLLGAPLCRPPWPLSALGRVV*LGPGSP
Trigger: TGGGCTTCCTGGGCCCAGCCAGACCACCCTTCCCAA...AGCAGAGAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTCTGCTTGGGACAGTTCTGGCTaGGAGAGGCCAGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GRPLLGAPLCRPPWPLSAWDSSG*ERPGWL
Trigger: GAGCCAGCCTGGCCTCTCCCAGCCAGAACTGTCCCA...AGCAGAGAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGTGAGCTGTCCCAGTTaGTGTCCTTCAGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRVSCPS*CPSGCS
Trigger: AGAGCAGCCTGAAGGACATCAACTGGGACAGCTCAC...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp CACAGGGGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCAGTCAGCCTCCAGCTTaGCCAGTGGCCCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: HRGRPLLGAPLCRPPWPLSQPPA*PVARRC
Trigger: ACATCTTCGGGCCACTGGTCAAGCTGGAGGCTGACT...GAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCCCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCAGAGGCCCGTCCTTGTaGAGCGTCACTTCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSRGPSL*SVTSLH
Trigger: ATGCAAGGAAGTGACGCTGCACAAGGACGGGCCTCT...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCCTTGTTGATCTGCTGTaGCGTGATCTGCCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSLVDLL*RDLPCS
Trigger: CGAGCACGGCAGATCACGGCACAGCAGATCAACAAG...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CACAGGGGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCAGCTGCTGCAGCTTCTaGAGCTCAGGCATGCTGTCC +
Preference number: 4 (lower is better)
Translates to: HRGRPLLGAPLCRPPWPLSCCSF*SSGMLS
Trigger: GGACAGCATGCCTGAGCTGCAGAAGCTGCAGCAGCT...GAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCCCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TCCGGGGCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGGGCGGATGGGCCGGATaGCCAGCACCACCAAGCGCT +
Preference number: 4 (lower is better)
Translates to: SGAGRPAMRPPPSMGKNPGGWAG*PAPPSA
Trigger: AGCGCTTGGTGGTGCTGGGCATCCGGCCCATCCGCC...CGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGCCCCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGATGCGGTATTGCACCTaGAGGCGGATGGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRMRYCT*RRMGRM
Trigger: CATCCGGCCCATCCGCCTGCAGGTGCAATACCGCAT...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGCGAGGCTTGCTGAACTaGATGAGGCTCTCACGTAGG +
Preference number: 4 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRRGLLN*MRLSRR
Trigger: CCTACGTGAGAGCCTCATGCAGTTCAGCAAGCCTCG...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTCTGCTCTCCTCGTCTACGCCTaGCTTCTCCAGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRPLLGAPLCRPPWPLSALLVYA*LLQVLQ
Trigger: CTGGAGGACCTGGAGAAGCCAGGCGTAGACGAGGAG...AGCAGAGAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGAACCTTGATGACGTaGCCAATCCCCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRGTLMT*PIPFHR
Trigger: CCTGTGGAAGGGGATTGGCCACGTCATCAAGGTTCC...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGTGGCCTCACGGCTCTTaGCACAGAGGCGTACGACCT +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRWPHGS*HRGVRP
Trigger: AGGTCGTACGCCTCTGTGCCAAGAGCCGTGAGGCCA...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCCGAGGATTAGCTGCTTaGCCCCAAGGACTACAGGCA +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSRGLAA*PQGLQA
Trigger: TGCCTGTAGTCCTTGGGGCCAAGCAGCTAATCCTCG...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCGTGATGATGCCGATCTaGTCAGGCTTTGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSVMMPI*SGFAPA
Trigger: GGCAGGTGCAAAGCCTGACCAGATCGGCATCATCAC...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCTTCACAGCATACACCTaGGAGTGGTTGAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSFTAYT*EWLRSG
Trigger: CCCTGACCTCAACCACTCTCAGGTGTATGCTGTGAA...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTCTGCTTGTGCAGGGAGCCGCTaGACTGCATGTACTGCACCA +
Preference number: 4 (lower is better)
Translates to: GRPLLGAPLCRPPWPLSACAGSR*TACTAP
Trigger: TGGTGCAGTACATGCAGTTCAGCGGCTCCCTGCACA...AGCAGAGAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTCTGCTAGGAACCCAATGCCCTaGTGTTCATTGGCGCGCACG +
Preference number: 4 (lower is better)
Translates to: GRPLLGAPLCRPPWPLSARNPMP*CSLART
Trigger: CGTGCGCGCCAATGAACATCAGGGCATTGGGTTCCT...AGCAGAGAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGTCCTGGATTAGGGGCTaGCACTGTGAGCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRSWIRG*HCELSQ
Trigger: CTGGGACAGCTCACAGTGGCAGCCCCTAATCCAGGA...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCTCCAGCTTGTTGATCTaGTGTGCCGTGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSSSLLI*CAVICR
Trigger: ACGGCAGATCACGGCACAGCAGATCAACAAGCTGGA...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGCAGATCTCATCACCCTaGATGAGCCGCATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRQISSP*MSRMSE
Trigger: CTCTGACATGCGGCTCATGCAGGGTGATGAGATCTG...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCCCAGGTCCTCCAGAGTaGCTGAAGGATTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSPGPPE*LKDFPS
Trigger: GGAAGGAAAATCCTTCAGCCACTCTGGAGGACCTGG...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCAGCTGTGAAGCGCTTTaGCAGCTGGCACTTGATGAC +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSSCEAL*QLALDD
Trigger: GTCATCAAGTGCCAGCTGCCAAAGCGCTTCACAGCT...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TCCGGGGCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGACCACTGGGCCCAGCTaGCAGTGGTCACCGACGAGG +
Preference number: 4 (lower is better)
Translates to: SGAGRPAMRPPPSMGKNPTTGPS*QWSPTR
Trigger: CCTCGTCGGTGACCACTGCCAGCTGGGCCCAGTGGT...CGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGCCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTGCACCTGCAGGCGGATaGGCCGGATGCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: APSNEASTLDGEEPAGRAAPAGG*AGCPAP
Trigger: TGGTGCTGGGCATCCGGCCCATCCGCCTGCAGGTGC...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TCCGGGGCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGGGCTGGCCTGGCTGTTaGGAAGGGTGGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGAGRPAMRPPPSMGKNPGWPGC*EGWSGW
Trigger: CCAGCCAGACCACCCTTCCCAACAGCCAGGCCAGCC...CGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGCCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCAGGCCACGTCCTGGCTaGCCTGGCTGTTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQARPRPG*PGCWEG
Trigger: CCCTTCCCAACAGCCAGGCCAGCCAGGACGTGGCCT...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGCGGCCTTCGCAGGGATaGAGCCCAGCAGGAAGACGT +
Preference number: 4 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVRPSQG*SPAGRR
Trigger: ACGTCTTCCTGCTGGGCTTCATCCCTGCGAAGGCCG...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp CACAGGGGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTTCACAGCATACACCTaGGAGTGGTTGAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: HRGRPLLGAPLCRPPWPLFTAYT*EWLRSG
Trigger: CCCTGACCTCAACCACTCTCAGGTGTATGCTGTGAA...GAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCCCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGTGCTGTCCATGTTCCTaGTCTGGTTGTGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRCCPCS*SGCAKP
Trigger: TGGCTTTGCACAACCAGATCAGGAACATGGACAGCA...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp CACAGGGGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCCTTCTCATCTGCAGATaGCAGCTCGCCTGTCTCATC +
Preference number: 4 (lower is better)
Translates to: HRGRPLLGAPLCRPPWPLLLICR*QLACLI
Trigger: GATGAGACAGGCGAGCTGTCATCTGCAGATGAGAAG...GAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCCCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGCCCCATTTTGCAAGATaGCCTCTGGTCCAACTTGTG +
Preference number: 4 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRPHFAR*PLVQLV
Trigger: CACAAGTTGGACCAGAGGGCATCTTGCAAAATGGGG...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CACAGGGGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTCCACAGCCCCATTTTaGAAGATGCCCTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: HRGRPLLGAPLCRPPWPLSTAPF*KMPSGP
Trigger: TGGACCAGAGGGCATCTTGCAAAATGGGGCTGTGGA...GAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCCCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGGGATTCCACAGTAACTaGAGGCGTGGACTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRGFHSN*RRGLGG
Trigger: ACCTCCCAGTCCACGCCTGCAGTTACTGTGGAATCC...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGTGGCTGGCACAGGGCTaGCTGCACAACAGCACCACC +
Preference number: 4 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVWLAQG*LHNSTT
Trigger: GGTGGTGCTGTTGTGCAGGCAGCCCTGTGCCAGCCA...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TCCGGGGCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGTGCTGTGCCGTGATCTaGCGTGCTCGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SGAGRPAMRPPPSMGKNPCCAVI*RARSCS
Trigger: GGAGCAGCTGCGAGCACGGCAGATCACGGCACAGCA...CGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGCCCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGCGAGGCTTGCTGAACTaGATGAGGCTCTCACGTAGG +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRRGLLN*MRLSRR
Trigger: CCTACGTGAGAGCCTCATGCAGTTCAGCAAGCCTCG...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCATCTGGTCATGGGTCTaGAAGTACATGTTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSIWSWV*KYMFEG
Trigger: GCCCTCGAACATGTACTTCCAGACCCATGACCAGAT...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTCGCCCAAAGCGGTTCTTCTaGCGGCCCCCACGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: PRLRGSGFSALPFPEASRPKRFF*RPPRPV
Trigger: GACTGGCCGTGGGGGCCGCCAGAAGAACCGCTTTGG...GCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGCTGTTGGGAAGGGTaGTCTGGCTGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVGCWEG*SGWAQE
Trigger: TTCCTGGGCCCAGCCAGACCACCCTTCCCAACAGCC...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGAATCTTGACCAGCCATaGCAGAAAGCACCGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRNLDQP*QKAPVL
Trigger: CAGGACCGGTGCTTTCTGTCATGGCTGGTCAAGATT...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGCAGTCTTGGGCAAAGTaGAGAAGGCGATTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRQSWAK*RRRFSS
Trigger: AGAAGAGAATCGCCTTCTTCACTTTGCCCAAGACTG...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp TCCGGGGCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGACACCTGAGAGTGGTTaGGGTCAGGGAGCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: SGAGRPAMRPPPSMGKNPTPESG*GQGAPE
Trigger: CTCAGGGGCTCCCTGACCTCAACCACTCTCAGGTGT...CGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGCCCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCACACCTGAGAGTGGTTaGGGTCAGGGAGCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQATPESG*GQGAPE
Trigger: CTCAGGGGCTCCCTGACCTCAACCACTCTCAGGTGT...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCGTAGACAATAGTGGCTaGTGTCACAGTCTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSVDNSG*CHSLAC
Trigger: ACAGGCAAGACTGTGACATCAGCCACTATTGTCTAC...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCCTCGAAGAGCGATTGTaGCAGTCCGGCCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQALEERL*QSGLGC
Trigger: GCAGCCAAGGCCGGACTGTCACAATCGCTCTTCGAG...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGACTGGGACAGCCCGGTaGCCCCGCCGTGCTGGTATG +
Preference number: 4 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQTGTAR*PRRAGM
Trigger: CATACCAGCACGGCGGGGTCACCGGGCTGTCCCAGT...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGCACTTCCTTGCATTTTaGCCTCACGAGGTGATTCAC +
Preference number: 4 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRHFLAF*PHEVIH
Trigger: GTGAATCACCTCGTGAGGGCAAAATGCAAGGAAGTG...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTGGGTGCATGCGGTATTaGACCTGCAGGCGGATGGGC +
Preference number: 4 (lower is better)
Translates to: APSNEASTLDGEEPAGRAGCMRY*TCRRMG
Trigger: GCCCATCCGCCTGCAGGTGCAATACCGCATGCACCC...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTACTTGTGCGTCGAGCTaGCCGGCCGCGCCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRTCASS*PAAPPA
Trigger: CGCAGGCGGCGCGGCCGGCCAGCTCGACGCACAAGT...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGACTGCAGGCGTGGACTaGGAGGTCCTTAGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRTAGVD*EVLSVV
Trigger: TACTACACTAAGGACCTCCCAGTCCACGCCTGCAGT...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTTCCTTCAGGCTGCTCTaGCTGGCACAGGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: APSNEASTLDGEEPAGRASFRLL*LAQGCL
Trigger: CAGGCAGCCCTGTGCCAGCCAGAGCAGCCTGAAGGA...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGAGCTGTGAAGCGCTTTaGCAGCTGGCACTTGATGAC +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRSCEAL*QLALDD
Trigger: GTCATCAAGTGCCAGCTGCCAAAGCGCTTCACAGCT...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTCGCGTGCCTGGAGGGCCCTaGATGAGGCTGAGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: PRLRGSGFSALPFPEASRVPGGP*MRLSGL
Trigger: GAGACCACTCAGCCTCATCCAGGGCCCTCCAGGCAC...GCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CACAGGGGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCATCTGGTCATGGGTCTaGAAGTACATGTTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: HRGRPLLGAPLCRPPWPLIWSWV*KYMFEG
Trigger: GCCCTCGAACATGTACTTCCAGACCCATGACCAGAT...GAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCCCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGCCAGTCTTGGTTTTTaGGGTGCCCCGACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQAASLGF*GAPTSC
Trigger: GCAGCTGGTCGGGGCACCCCAAAAACCAAGACTGGC...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTGGCTGTTGGGAAGGGTaGTCTGGCTGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: APSNEASTLDGEEPAGRAGCWEG*SGWAQE
Trigger: TTCCTGGGCCCAGCCAGACCACCCTTCCCAACAGCC...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTCTGCTGACGCCATTCTGCAATaGGCCCTCGTAGAAGATGTT +
Preference number: 4 (lower is better)
Translates to: GRPLLGAPLCRPPWPLSADAILQ*ALVEDV
Trigger: AACATCTTCTACGAGGGCTCATTGCAGAATGGCGTC...AGCAGAGAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CACAGGGGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTATTTCCTCGGCCATTaGAGAACCACTTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HRGRPLLGAPLCRPPWPLYFLGH*RTTSCW
Trigger: CCAGCAAGAAGTGGTTCTGCAATGGCCGAGGAAATA...GAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCCCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGCAGATCTCATCACCCTaGATGAGCCGCATGTCTCTT +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRQISSP*MSRMSL
Trigger: AAGAGACATGCGGCTCATGCAGGGTGATGAGATCTG...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075666.8
CDS-3UTR GCA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGCTGATGTCACAGTCTTaGCTGTGCCTGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVLMSQS*LCLEGP
Trigger: AGGGCCCTCCAGGCACAGGCAAGACTGTGACATCAG...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CACAGGGGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTTCCTGATCTGGTTGTaGAAAGCCAGGAAGGACACT +
Preference number: 4 (lower is better)
Translates to: HRGRPLLGAPLCRPPWPLFLIWL*KARKDT
Trigger: AGTGTCCTTCCTGGCTTTGCACAACCAGATCAGGAA...GAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCCCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TCCGGGGCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGAGGATGGAACGGAACTaGATCTTGGCCAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SGAGRPAMRPPPSMGKNPRMERN*ILASLG
Trigger: CCCGAGGCTGGCCAAGATGCAGTTCCGTTCCATCCT...CGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGCCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCAGGATGGAACGGAACTaGATCTTGGCCAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQARMERN*ILASLG
Trigger: CCCGAGGCTGGCCAAGATGCAGTTCCGTTCCATCCT...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGCAGCTGGCTGGTCTTaGCCACACTGTCATCCACAG +
Preference number: 4 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQAAAGWS*PHCHPQ
Trigger: CTGTGGATGACAGTGTGGCCAAGACCAGCCAGCTGC...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCACACTGGGGAGTCAATaGCCTCACGGCTCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQATLGSQ*PHGSWH
Trigger: GTGCCAAGAGCCGTGAGGCCATTGACTCCCCAGTGT...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCAGCCAGGAAGGACACTaGGGAGTCAATGGCCTCACG +
Preference number: 4 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQASQEGH*GVNGLT
Trigger: CGTGAGGCCATTGACTCCCCAGTGTCCTTCCTGGCT...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGAACGGAACTGCATCTTaGCCAGCCTCGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVNGTAS*PASGHQ
Trigger: CTGGTGACCCGAGGCTGGCCAAGATGCAGTTCCGTT...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGTCAGGCTCAGTGGCCTaGGTGCTCTCGTCAATGAGG +
Preference number: 4 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVSGSVA*VLSSMR
Trigger: CCTCATTGACGAGAGCACCCAGGCCACTGAGCCTGA...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGACCACTGGGCCCAGCTaGCAGTGGTCACCGACGAGG +
Preference number: 4 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQTTGPS*QWSPTR
Trigger: CCTCGTCGGTGACCACTGCCAGCTGGGCCCAGTGGT...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGTGGGAGGCCACGTCCTaGCTGGCCTGGCTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQWEATS*LAWLLG
Trigger: TCCCAACAGCCAGGCCAGCCAGGACGTGGCCTCCCA...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGTGGACGGAAAGGCGCTaGGTGCAGGGTGCATGCGGT +
Preference number: 4 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQWTERR*VQGACG
Trigger: ACCGCATGCACCCTGCACTCAGCGCCTTTCCGTCCA...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTCGCTCCTGGATTAGGGGCTaGCACTGTGAGCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRLRGSGFSALPFPEASRSWIRG*HCELSQ
Trigger: CTGGGACAGCTCACAGTGGCAGCCCCTAATCCAGGA...GCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTCGCGCTCGCAGCTGCTCCTaGTCAGAGGGAATCTTGACC +
Preference number: 4 (lower is better)
Translates to: PRLRGSGFSALPFPEASRARSCS*SEGILT
Trigger: GGTCAAGATTCCCTCTGAGCAGGAGCAGCTGCGAGC...GCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGTGCCGTGATCTGCCGTaGTCGCAGCTGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQCRDLP*SQLLLL
Trigger: GAGCAGGAGCAGCTGCGAGCACGGCAGATCACGGCA...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCCTTGTTGATCTGCTGTaGCGTGATCTGCCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQALVDLL*RDLPCS
Trigger: CGAGCACGGCAGATCACGGCACAGCAGATCAACAAG...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTCGCCTGATGTCACAGTCTTaGCTGTGCCTGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PRLRGSGFSALPFPEASRLMSQS*LCLEGP
Trigger: AGGGCCCTCCAGGCACAGGCAAGACTGTGACATCAG...GCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTGCAGCTGGCTGGTCTTaGCCACACTGTCATCCACAG +
Preference number: 4 (lower is better)
Translates to: APSNEASTLDGEEPAGRAAAGWS*PHCHPQ
Trigger: CTGTGGATGACAGTGTGGCCAAGACCAGCCAGCTGC...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTCGCAGCTCAGCTAGCAGCTaGCTGGTCTTGGCCACACTG +
Preference number: 4 (lower is better)
Translates to: PRLRGSGFSALPFPEASRSSASS*LVLATL
Trigger: CAGTGTGGCCAAGACCAGCCAGCTGCTAGCTGAGCT...GCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCAGAACCACTTCTTGCTaGTATTACAGTAAACCACGC +
Preference number: 4 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSRTTSC*YYSKPR
Trigger: GCGTGGTTTACTGTAATACCAGCAAGAAGTGGTTCT...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGGAACCTTGATGACGTaGCCAATCCCCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQAGTLMT*PIPFHR
Trigger: CCTGTGGAAGGGGATTGGCCACGTCATCAAGGTTCC...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTCGCACACTGGGGAGTCAATaGCCTCACGGCTCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: PRLRGSGFSALPFPEASRTLGSQ*PHGSWH
Trigger: GTGCCAAGAGCCGTGAGGCCATTGACTCCCCAGTGT...GCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTAGCCAGGAAGGACACTaGGGAGTCAATGGCCTCACG +
Preference number: 4 (lower is better)
Translates to: APSNEASTLDGEEPAGRASQEGH*GVNGLT
Trigger: CGTGAGGCCATTGACTCCCCAGTGTCCTTCCTGGCT...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGACAGTCCGGCCTTaGCTGCCTTCTTGCACATCA +
Preference number: 4 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQAVTVRP*LPSCTS
Trigger: TGATGTGCAAGAAGGCAGCCAAGGCCGGACTGTCAC...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGTTGGGAAGGGTGGTCTaGCTGGGCCCAGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQLGRVV*LGPGSP
Trigger: TGGGCTTCCTGGGCCCAGCCAGACCACCCTTCCCAA...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCGGCTGGCCTGGCTGTTaGGAAGGGTGGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRPLGHRNAKFVLLKRSPGWPGC*EGWSGW
Trigger: CCAGCCAGACCACCCTTCCCAACAGCCAGGCCAGCC...GGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCAGGCCACGTCCTGGCTaGCCTGGCTGTTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GRPLGHRNAKFVLLKRSPRPRPG*PGCWEG
Trigger: CCCTTCCCAACAGCCAGGCCAGCCAGGACGTGGCCT...GGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCGTGACCCCGCCGTGCTaGTATGCCCGCTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFVTPPC*YARSPW
Trigger: CCAGGGAGAGCGGGCATACCAGCACGGCGGGGTCAC...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp TCCGGGGCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGGCTCAGAGGGAATCTTaGCCAGCCATGACAGAAAGC +
Preference number: 4 (lower is better)
Translates to: SGAGRPAMRPPPSMGKNPAQRES*PAMTES
Trigger: GCTTTCTGTCATGGCTGGTCAAGATTCCCTCTGAGC...CGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGCCCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGCTCAGAGGGAATCTTaGCCAGCCATGACAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVAQRES*PAMTES
Trigger: GCTTTCTGTCATGGCTGGTCAAGATTCCCTCTGAGC...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTGGTGGATCTTCTCTGTaGGCTGGTCCACAGCGATGT +
Preference number: 4 (lower is better)
Translates to: APSNEASTLDGEEPAGRAGGSSL*AGPQRC
Trigger: ACATCGCTGTGGACCAGCTCACAGAGAAGATCCACC...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGCTCGAAGAGCGATTGTaGCAGTCCGGCCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQLEERL*QSGLGC
Trigger: GCAGCCAAGGCCGGACTGTCACAATCGCTCTTCGAG...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGCATATCTTGCTCTGGTaGGAGCCACATTCAGACGCC +
Preference number: 4 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVHILLW*EPHSDA
Trigger: GGCGTCTGAATGTGGCTCTCACCAGAGCAAGATATG...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGCAGCGTCACTTCCTTaGATTTTGCCCTCACGAGGT +
Preference number: 4 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVAASLP*ILPSRG
Trigger: ACCTCGTGAGGGCAAAATGCAAGGAAGTGACGCTGC...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTCGCAGAGGCCCGTCCTTGTaGAGCGTCACTTCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: PRLRGSGFSALPFPEASRRGPSL*SVTSLH
Trigger: ATGCAAGGAAGTGACGCTGCACAAGGACGGGCCTCT...GCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGTGCCGTGCTCGCAGCTaGTCCTGCTCAGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQCRARS*SCSEGI
Trigger: GATTCCCTCTGAGCAGGAGCAGCTGCGAGCACGGCA...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCTGCTGTGCCGTGATCTaGCGTGCTCGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GRPLGHRNAKFVLLKRSPCCAVI*RARSCS
Trigger: GGAGCAGCTGCGAGCACGGCAGATCACGGCACAGCA...GGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TCCGGGGCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGACTGCAGGCGTGGACTaGGAGGTCCTTAGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: SGAGRPAMRPPPSMGKNPTAGVD*EVLSVV
Trigger: TACTACACTAAGGACCTCCCAGTCCACGCCTGCAGT...CGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGCCCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CACAGGGGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCAGAACCACTTCTTGCTaGTATTACAGTAAACCACGC +
Preference number: 4 (lower is better)
Translates to: HRGRPLLGAPLCRPPWPLRTTSC*YYSKPR
Trigger: GCGTGGTTTACTGTAATACCAGCAAGAAGTGGTTCT...GAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCCCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGCCAGGTCCTCCAGAGTaGCTGAAGGATTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVPGPPE*LKDFPS
Trigger: GGAAGGAAAATCCTTCAGCCACTCTGGAGGACCTGG...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGTCCACTTGGAAGTTGTaGGTCACTTCCACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVSTWKL*VTSTGA
Trigger: TGCCCCTGTGGAAGTGACCCACAACTTCCAAGTGGA...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTCGAGGATTAGCTGCTTaGCCCCAAGGACTACAGGCA +
Preference number: 4 (lower is better)
Translates to: APSNEASTLDGEEPAGRARGLAA*PQGLQA
Trigger: TGCCTGTAGTCCTTGGGGCCAAGCAGCTAATCCTCG...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGGAAGGCGTCCACACTaGCAATTTCCACTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQAGRRPH*QFPLPG
Trigger: ACCAGGAAGTGGAAATTGCCAGTGTGGACGCCTTCC...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTCCAAAGCGGTTCTTCTaGCGGCCCCCACGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRPKRFF*RPPRPV
Trigger: GACTGGCCGTGGGGGCCGCCAGAAGAACCGCTTTGG...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGCCTATCAAAAGAGGTTaGCTTCCACACAAAATCCAC +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRPIKRG*LPHKIH
Trigger: GTGGATTTTGTGTGGAAGTCAACCTCTTTTGATAGG...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTCTGCTCCTATCAAAAGAGGTTaGCTTCCACACAAAATCCAC +
Preference number: 4 (lower is better)
Translates to: GRPLLGAPLCRPPWPLSAPIKRG*LPHKIH
Trigger: GTGGATTTTGTGTGGAAGTCAACCTCTTTTGATAGG...AGCAGAGAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCTGCTGTCCATGTTCCTaGTCTGGTTGTGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQACCPCS*SGCAKP
Trigger: TGGCTTTGCACAACCAGATCAGGAACATGGACAGCA...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTTCCACAGCCCCATTTTaGAAGATGCCCTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: APSNEASTLDGEEPAGRASTAPF*KMPSGP
Trigger: TGGACCAGAGGGCATCTTGCAAAATGGGGCTGTGGA...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTGCAGCGTCACTTCCTTaGATTTTGCCCTCACGAGGT +
Preference number: 4 (lower is better)
Translates to: APSNEASTLDGEEPAGRAAASLP*ILPSRG
Trigger: ACCTCGTGAGGGCAAAATGCAAGGAAGTGACGCTGC...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTTGCCGTGATCTGCCGTaGTCGCAGCTGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRCRDLP*SQLLLL
Trigger: GAGCAGGAGCAGCTGCGAGCACGGCAGATCACGGCA...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTTCCAGCTTGTTGATCTaGTGTGCCGTGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: APSNEASTLDGEEPAGRASSLLI*CAVICR
Trigger: ACGGCAGATCACGGCACAGCAGATCAACAAGCTGGA...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGGTCTTCAGTGCACTCTaGATCCTATCAAAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRVFSAL*ILSKEV
Trigger: AACCTCTTTTGATAGGATGCAGAGTGCACTGAAGAC...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGAGCTGCTGCAGCTTCTaGAGCTCAGGCATGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQSCCSF*SSGMLS
Trigger: GGACAGCATGCCTGAGCTGCAGAAGCTGCAGCAGCT...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCTCCTTCAGGCTGCTCTaGCTGGCACAGGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFSFRLL*LAQGCL
Trigger: CAGGCAGCCCTGTGCCAGCCAGAGCAGCCTGAAGGA...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTGTGCCTGGAGGGCCCTaGATGAGGCTGAGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRVPGGP*MRLSGL
Trigger: GAGACCACTCAGCCTCATCCAGGGCCCTCCAGGCAC...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCTTCAGTCCTGTCTGGTaGATCTTCTCTGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQAFSPVW*IFSVSW
Trigger: CCAGCTCACAGAGAAGATCCACCAGACAGGACTGAA...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGTCAGGCTCAGTGGCCTaGGTGCTCTCGTCAATGAGG +
Preference number: 4 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQSGSVA*VLSSMR
Trigger: CCTCATTGACGAGAGCACCCAGGCCACTGAGCCTGA...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCGGGCCCAGCTGGCAGTaGTCACCGACGAGGATTAGC +
Preference number: 4 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFGPSWQ*SPTRIS
Trigger: GCTAATCCTCGTCGGTGACCACTGCCAGCTGGGCCC...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTGAAGGGTGGTCTGGCTaGGCCCAGGAAGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKREGWSG*AQEAQS
Trigger: GCTTTGGGCTTCCTGGGCCCAGCCAGACCACCCTTC...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCATGGGAGGCCACGTCCTaGCTGGCCTGGCTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: ALAPLSSPLLGCSHSGASWEATS*LAWLLG
Trigger: TCCCAACAGCCAGGCCAGCCAGGACGTGGCCTCCCA...TGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCTGGGACAGTTCTGGCTaGGAGAGGCCAGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFWDSSG*ERPGWL
Trigger: GAGCCAGCCTGGCCTCTCCCAGCCAGAACTGTCCCA...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTCGCGCTCTCCCTGGTATGTaGAGTCTTGTGAGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PRLRGSGFSALPFPEASRALPGM*SLVRVP
Trigger: TGGCACTCTCACAAGACTCCACATACCAGGGAGAGC...GCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGGGTGGATCTTCTCTGTaGGCTGGTCCACAGCGATGT +
Preference number: 4 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQGGSSL*AGPQRC
Trigger: ACATCGCTGTGGACCAGCTCACAGAGAAGATCCACC...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp CCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTCGCGACGCCATTCTGCAATaGGCCCTCGTAGAAGATGTT +
Preference number: 4 (lower is better)
Translates to: PRLRGSGFSALPFPEASRDAILQ*ALVEDV
Trigger: AACATCTTCTACGAGGGCTCATTGCAGAATGGCGTC...GCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCGCTCGCAGCTGCTCCTaGTCAGAGGGAATCTTGACC +
Preference number: 4 (lower is better)
Translates to: GRPLGHRNAKFVLLKRSPARSCS*SEGILT
Trigger: GGTCAAGATTCCCTCTGAGCAGGAGCAGCTGCGAGC...GGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTTGCCGTGCTCGCAGCTaGTCCTGCTCAGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRCRARS*SCSEGI
Trigger: GATTCCCTCTGAGCAGGAGCAGCTGCGAGCACGGCA...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCGGACTACAGGCACCATaGACTCAGGCTCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GRPLGHRNAKFVLLKRSPGLQAP*TQAQWP
Trigger: AGGCCACTGAGCCTGAGTGCATGGTGCCTGTAGTCC...GGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGGGTGCATGCGGTATTaGACCTGCAGGCGGATGGGC +
Preference number: 4 (lower is better)
Translates to: ALAPLSSPLLGCSHSGASGCMRY*TCRRMG
Trigger: GCCCATCCGCCTGCAGGTGCAATACCGCATGCACCC...TGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTGATCTGGTCAGGCTTTaGACCTGCCTTCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: APSNEASTLDGEEPAGRADLVRL*TCLQQL
Trigger: AAGCTGTTGAAGGCAGGTGCAAAGCCTGACCAGATC...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCACCCGCCGTGCTGGTATaGCCGCTCTCCCTGGTATGT +
Preference number: 4 (lower is better)
Translates to: ALAPLSSPLLGCSHSGASPAVLV*PLSLVC
Trigger: ACATACCAGGGAGAGCGGGCATACCAGCACGGCGGG...TGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTCTCCTCGTCTACGCCTaGCTTCTCCAGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRLLVYA*LLQVLQ
Trigger: CTGGAGGACCTGGAGAAGCCAGGCGTAGACGAGGAG...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCTGGCCTCACGGCTCTTaGCACAGAGGCGTACGACCT +
Preference number: 4 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFWPHGS*HRGVRP
Trigger: AGGTCGTACGCCTCTGTGCCAAGAGCCGTGAGGCCA...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCCTTGCACATCACCACTaGGCCCAGCTGGCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFLAHHH*AQLAVV
Trigger: GACCACTGCCAGCTGGGCCCAGTGGTGATGTGCAAG...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCGCCAGTCTTGGTTTTTaGGGTGCCCCGACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFASLGF*GAPTSC
Trigger: GCAGCTGGTCGGGGCACCCCAAAAACCAAGACTGGC...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGTCAGCCTCCAGCTTaGCCAGTGGCCCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRSQPPA*PVARRC
Trigger: ACATCTTCGGGCCACTGGTCAAGCTGGAGGCTGACT...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGTCATCCTTTAGCTGCTaGAGCTTCTGCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQSSFSC*SFCSSG
Trigger: GCCTGAGCTGCAGAAGCTGCAGCAGCTAAAGGATGA...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTCCTTGGCTGCCTTCTTaGACATCACCACTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRPWLPS*TSPLGP
Trigger: TGGGCCCAGTGGTGATGTGCAAGAAGGCAGCCAAGG...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCCCTTGGCTGCCTTCTTaGACATCACCACTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFPWLPS*TSPLGP
Trigger: TGGGCCCAGTGGTGATGTGCAAGAAGGCAGCCAAGG...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGTTTTAGCAGTGGAGCCGGCCCTGGCTGCTaGGGTCATAGACAGACCCGG +
Preference number: 4 (lower is better)
Translates to: FLSSPRLLTQWCFSFSSGAGPGC*GHRQTR
Trigger: CCGGGTCTGTCTATGACCGCAGCAGCCAGGGCCGGC...TCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAACGGAACTGCATCTTaGCCAGCCTCGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRNGTAS*PASGHQ
Trigger: CTGGTGACCCGAGGCTGGCCAAGATGCAGTTCCGTT...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCCTTCTCATCTGCAGATaGCAGCTCGCCTGTCTCATC +
Preference number: 4 (lower is better)
Translates to: GRPLGHRNAKFVLLKRSPLLICR*QLACLI
Trigger: GATGAGACAGGCGAGCTGTCATCTGCAGATGAGAAG...GGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TCCGGGGCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGGTCTTCAGTGCACTCTaGATCCTATCAAAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SGAGRPAMRPPPSMGKNPVFSAL*ILSKEV
Trigger: AACCTCTTTTGATAGGATGCAGAGTGCACTGAAGAC...CGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGCCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGGATCTGGTCAGGCTTTaGACCTGCCTTCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQDLVRL*TCLQQL
Trigger: AAGCTGTTGAAGGCAGGTGCAAAGCCTGACCAGATC...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAAGCTCAGCTAGCAGCTaGCTGGTCTTGGCCACACTG +
Preference number: 4 (lower is better)
Translates to: ALAPLSSPLLGCSHSGASSSASS*LVLATL
Trigger: CAGTGTGGCCAAGACCAGCCAGCTGCTAGCTGAGCT...TGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGAAAGCACCGGTCCTaGATTAGGGGCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFRKHRS*IRGCHC
Trigger: ACAGTGGCAGCCCCTAATCCAGGACCGGTGCTTTCT...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTCACACAAAATCCACTTaGAAGTTGTGGGTCACTTCC +
Preference number: 4 (lower is better)
Translates to: APSNEASTLDGEEPAGRAHTKST*KLWVTS
Trigger: GGAAGTGACCCACAACTTCCAAGTGGATTTTGTGTG...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTGTGACAGTCCGGCCTTaGCTGCCTTCTTGCACATCA +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRVTVRP*LPSCTS
Trigger: TGATGTGCAAGAAGGCAGCCAAGGCCGGACTGTCAC...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCGTGATGATGCCGATCTaGTCAGGCTTTGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFVMMPI*SGFAPA
Trigger: GGCAGGTGCAAAGCCTGACCAGATCGGCATCATCAC...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTTTTGCCCTCACGAGGTaGTTCACAATGTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRFALTR*FTMWLP
Trigger: TGGCAGCCACATTGTGAATCACCTCGTGAGGGCAAA...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAATCTTGACCAGCCATaGCAGAAAGCACCGGTCCTG +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRNLDQP*QKAPVL
Trigger: CAGGACCGGTGCTTTCTGTCATGGCTGGTCAAGATT...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGCAGTCTTGGGCAAAGTaGAGAAGGCGATTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQQSWAK*RRRFSS
Trigger: AGAAGAGAATCGCCTTCTTCACTTTGCCCAAGACTG...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp TTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGTTTTAGCAGTGGATGGACGGAAAGGCGCTaGGTGCAGGGTGCATGCGGT +
Preference number: 4 (lower is better)
Translates to: FLSSPRLLTQWCFSFSSGWTERR*VQGACG
Trigger: ACCGCATGCACCCTGCACTCAGCGCCTTTCCGTCCA...TCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTCATATCTTGCTCTGGTaGGAGCCACATTCAGACGCC +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRHILLW*EPHSDA
Trigger: GGCGTCTGAATGTGGCTCTCACCAGAGCAAGATATG...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp CTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCTCAATCACGCCAGGCTGGCTCATCTaGGAGGGCTGGCTCATGGAC +
Preference number: 4 (lower is better)
Translates to: LGHRNAKFVLLKRSPSITPGWLI*EGWLMD
Trigger: GTCCATGAGCCAGCCCTCTCAGATGAGCCAGCCTGG...CGTGATTGAGGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTCTCCAGCTTGACCAGTaGCCCGAAGATGTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRLQLDQ*PEDVLV
Trigger: TACCAGAACATCTTCGGGCCACTGGTCAAGCTGGAG...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGGCTTGTCAGGTTGTaGCCACTGGAAGTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFRLVRL*PLEVKA
Trigger: GGCTTTGACTTCCAGTGGCCACAACCTGACAAGCCT...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGGCTTGTCAGGTTGTaGCCACTGGAAGTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRRLVRL*PLEVKA
Trigger: GGCTTTGACTTCCAGTGGCCACAACCTGACAAGCCT...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGTTTTAGCAGTGGATCCTTCTCCCGGCCCTaGAAGGCGTCCACACTGGCA +
Preference number: 4 (lower is better)
Translates to: FLSSPRLLTQWCFSFSSGSFSRP*KASTLA
Trigger: TGCCAGTGTGGACGCCTTCCAGGGCCGGGAGAAGGA...TCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCGCTCTCCCTGGTATGTaGAGTCTTGTGAGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFALPGM*SLVRVP
Trigger: TGGCACTCTCACAAGACTCCACATACCAGGGAGAGC...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCATTTGCCCTCACGAGGTaGTTCACAATGTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ALAPLSSPLLGCSHSGASFALTR*FTMWLP
Trigger: TGGCAGCCACATTGTGAATCACCTCGTGAGGGCAAA...TGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCCCCCATTTTGCAAGATaGCCTCTGGTCCAACTTGTG +
Preference number: 4 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFPHFAR*PLVQLV
Trigger: CACAAGTTGGACCAGAGGGCATCTTGCAAAATGGGG...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTCGCTGCAGAACCACTTCTTaGTGGTATTACAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: PRLRGSGFSALPFPEASRCRTTS*WYYSKP
Trigger: TGGTTTACTGTAATACCAGCAAGAAGTGGTTCTGCA...GCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGTTTTAGCAGTGGAGCGCTGAGTGCAGGGTaGATGCGGTATTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: FLSSPRLLTQWCFSFSSGALSAG*MRYCTC
Trigger: GCAGGTGCAATACCGCATGCACCCTGCACTCAGCGC...TCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCTCAATCACGGCGCTGAGTGCAGGGTaGATGCGGTATTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: LGHRNAKFVLLKRSPSITALSAG*MRYCTC
Trigger: GCAGGTGCAATACCGCATGCACCCTGCACTCAGCGC...CGTGATTGAGGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCACTTCTCCACATTGGCTaGCTCCGTCCTGTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: ALAPLSSPLLGCSHSGASLLHIG*LRPVEV
Trigger: TACCTCAACAGGACGGAGGCAGCCAATGTGGAGAAG...TGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCACTCCAGCTTGACCAGTaGCCCGAAGATGTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: ALAPLSSPLLGCSHSGASLQLDQ*PEDVLV
Trigger: TACCAGAACATCTTCGGGCCACTGGTCAAGCTGGAG...TGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCTTCAGTCCTGTCTGGTaGATCTTCTCTGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFFSPVW*IFSVSW
Trigger: CCAGCTCACAGAGAAGATCCACCAGACAGGACTGAA...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGGAAGGCGTCCACACTaGCAATTTCCACTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ALAPLSSPLLGCSHSGASGRRPH*QFPLPG
Trigger: ACCAGGAAGTGGAAATTGCCAGTGTGGACGCCTTCC...TGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCATATGCCCGCTCTCCCTaGTATGTGGAGTCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: ALAPLSSPLLGCSHSGASYARSP*YVESCE
Trigger: CTCACAAGACTCCACATACCAGGGAGAGCGGGCATA...TGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTGTAGACAATAGTGGCTaGTGTCACAGTCTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRVDNSG*CHSLAC
Trigger: ACAGGCAAGACTGTGACATCAGCCACTATTGTCTAC...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp CTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCTCAATCACGTGTGCAGGGAGCCGCTaGACTGCATGTACTGCACCA +
Preference number: 4 (lower is better)
Translates to: LGHRNAKFVLLKRSPSITCAGSR*TACTAP
Trigger: TGGTGCAGTACATGCAGTTCAGCGGCTCCCTGCACA...CGTGATTGAGGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp TTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGTTTTAGCAGTGGAAGGAACCCAATGCCCTaGTGTTCATTGGCGCGCACG +
Preference number: 4 (lower is better)
Translates to: FLSSPRLLTQWCFSFSSGRNPMP*CSLART
Trigger: CGTGCGCGCCAATGAACATCAGGGCATTGGGTTCCT...TCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp GCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGTCTCATCCTTTAGCTaGTGCAGCTTCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ALAPLSSPLLGCSHSGASVSSFS*CSFCSS
Trigger: TGAGCTGCAGAAGCTGCAGCAGCTAAAGGATGAGAC...TGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCTCAATCACGCAGTCCGGCCTTGGCTaGCTTCTTGCACATCACCAC +
Preference number: 4 (lower is better)
Translates to: LGHRNAKFVLLKRSPSITQSGLG*LLAHHH
Trigger: GTGGTGATGTGCAAGAAGGCAGCCAAGGCCGGACTG...CGTGATTGAGGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCCACACAAAATCCACTTaGAAGTTGTGGGTCACTTCC +
Preference number: 4 (lower is better)
Translates to: GRPLGHRNAKFVLLKRSPHTKST*KLWVTS
Trigger: GGAAGTGACCCACAACTTCCAAGTGGATTTTGTGTG...GGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGATACTAATCTGGTCATaGGTCTGGAAGTACATGTTC +
Preference number: 4 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQILIWS*VWKYMF
Trigger: GAACATGTACTTCCAGACCCATGACCAGATTAGTAT...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR TCA 90 bp TTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGTTTTAGCAGTGGATCTCATCACCCTGCATaGGCCGCATGTCTCTTAACC +
Preference number: 4 (lower is better)
Translates to: FLSSPRLLTQWCFSFSSGSHHPA*AACLLT
Trigger: GGTTAAGAGACATGCGGCTCATGCAGGGTGATGAGA...TCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075666.8
CDS-3UTR GCA 90 bp TTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGTTTTAGCAGTGGATCATCCTTTAGCTGCTaGAGCTTCTGCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: FLSSPRLLTQWCFSFSSGSSFSC*SFCSSG
Trigger: GCCTGAGCTGCAGAAGCTGCAGCAGCTAAAGGATGA...TCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGTTTTAGCAGTGGACTTCTCCACATTGGCTaGCTCCGTCCTGTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: FLSSPRLLTQWCFSFSSGLLHIG*LRPVEV
Trigger: TACCTCAACAGGACGGAGGCAGCCAATGTGGAGAAG...TCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCTCAATCACGTCCACTTGGAAGTTGTaGGTCACTTCCACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LGHRNAKFVLLKRSPSITSTWKL*VTSTGA
Trigger: TGCCCCTGTGGAAGTGACCCACAACTTCCAAGTGGA...CGTGATTGAGGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp CTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCTCAATCACGTATGCCCGCTCTCCCTaGTATGTGGAGTCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: LGHRNAKFVLLKRSPSITYARSP*YVESCE
Trigger: CTCACAAGACTCCACATACCAGGGAGAGCGGGCATA...CGTGATTGAGGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGTTTTAGCAGTGGAGTCTCATCCTTTAGCTaGTGCAGCTTCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: FLSSPRLLTQWCFSFSSGVSSFS*CSFCSS
Trigger: TGAGCTGCAGAAGCTGCAGCAGCTAAAGGATGAGAC...TCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTATACTAATCTGGTCATaGGTCTGGAAGTACATGTTC +
Preference number: 4 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRILIWS*VWKYMF
Trigger: GAACATGTACTTCCAGACCCATGACCAGATTAGTAT...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp GCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCACTGATCATACTAATCTaGTCATGGGTCTGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: ALAPLSSPLLGCSHSGASLIILI*SWVWKY
Trigger: GTACTTCCAGACCCATGACCAGATTAGTATGATCAG...TGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGTTTTAGCAGTGGACACTTCCTTGCATTTTaGCCTCACGAGGTGATTCAC +
Preference number: 4 (lower is better)
Translates to: FLSSPRLLTQWCFSFSSGHFLAF*PHEVIH
Trigger: GTGAATCACCTCGTGAGGGCAAAATGCAAGGAAGTG...TCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCTCAATCACGTTCCTGATCTGGTTGTaGAAAGCCAGGAAGGACACT +
Preference number: 4 (lower is better)
Translates to: LGHRNAKFVLLKRSPSITFLIWL*KARKDT
Trigger: AGTGTCCTTCCTGGCTTTGCACAACCAGATCAGGAA...CGTGATTGAGGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CCA 90 bp TTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGTTTTAGCAGTGGACTGATCATACTAATCTaGTCATGGGTCTGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: FLSSPRLLTQWCFSFSSGLIILI*SWVWKY
Trigger: GTACTTCCAGACCCATGACCAGATTAGTATGATCAG...TCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGTTTTAGCAGTGGATGCAGAACCACTTCTTaGTGGTATTACAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: FLSSPRLLTQWCFSFSSGCRTTS*WYYSKP
Trigger: TGGTTTACTGTAATACCAGCAAGAAGTGGTTCTGCA...TCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp TTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGTTTTAGCAGTGGAGCAGCATATGACATCTaGATTCATGAGAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: FLSSPRLLTQWCFSFSSGAAYDI*IHEKFS
Trigger: AGAGAACTTCTCATGAATGCAGATGTCATATGCTGC...TCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR GCA 90 bp CTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCTCAATCACGGCAGCATATGACATCTaGATTCATGAGAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LGHRNAKFVLLKRSPSITAAYDI*IHEKFS
Trigger: AGAGAACTTCTCATGAATGCAGATGTCATATGCTGC...CGTGATTGAGGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCTGGCTGGCCTGGCTGTaGGGAAGGGTGGTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSWLAWL*GRVVWL
Trigger: CAGCCAGACCACCCTTCCCAACAGCCAGGCCAGCCA...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CACAGGGGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTGGCTGGCCTGGCTGTaGGGAAGGGTGGTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: HRGRPLLGAPLCRPPWPLWLAWL*GRVVWL
Trigger: CAGCCAGACCACCCTTCCCAACAGCCAGGCCAGCCA...GAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCCCCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGAACGGAACTGCATCTaGGCCAGCCTCGGGTCACCA +
Preference number: 5 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRERNCI*ASLGSP
Trigger: TGGTGACCCGAGGCTGGCCAAGATGCAGTTCCGTTC...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCGAACGGAACTGCATCTaGGCCAGCCTCGGGTCACCA +
Preference number: 5 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSERNCI*ASLGSP
Trigger: TGGTGACCCGAGGCTGGCCAAGATGCAGTTCCGTTC...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGAGCAGCTGGCTGGTCTaGGCCACACTGTCATCCACA +
Preference number: 5 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRSSWLV*ATLSST
Trigger: TGTGGATGACAGTGTGGCCAAGACCAGCCAGCTGCT...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCACGAGGATTAGCTGCTaGGCCCCAAGGACTACAGGC +
Preference number: 5 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSTRISC*APRTTG
Trigger: GCCTGTAGTCCTTGGGGCCAAGCAGCTAATCCTCGT...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGAGGGTGCATGCGGTATaGCACCTGCAGGCGGATGGG +
Preference number: 5 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRRVHAV*HLQADG
Trigger: CCCATCCGCCTGCAGGTGCAATACCGCATGCACCCT...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGTGCAGCGTCACTTCCTaGCATTTTGCCCTCACGAGG +
Preference number: 5 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRCSVTS*HFALTR
Trigger: CCTCGTGAGGGCAAAATGCAAGGAAGTGACGCTGCA...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGCCCGGGTTGACAGTGTaGACAAGTTTGCGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRPGLTV*TSLRGL
Trigger: CAAGCCTCGCAAACTTGTCAACACTGTCAACCCGGG...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCGTTATCTTCTCCACATaGGCTGCCTCCGTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSVIFST*AASVLL
Trigger: CAACAGGACGGAGGCAGCCAATGTGGAGAAGATAAC...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CACAGGGGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCCGATCTGGTCAGGCTTaGCACCTGCCTTCAACAGCT +
Preference number: 5 (lower is better)
Translates to: HRGRPLLGAPLCRPPWPLRSGQA*HLPSTA
Trigger: AGCTGTTGAAGGCAGGTGCAAAGCCTGACCAGATCG...GAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCCCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGAGGCTCTCACGTAGGTaGTTGAGCGGCCCTTCCACT +
Preference number: 5 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRRLSRR*LSGPST
Trigger: AGTGGAAGGGCCGCTCAACAACCTACGTGAGAGCCT...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp TGCGGGCCTCTCTCCTCTCGCCGCCCACAGGGGGCGCCCGCTCCTCGGCGCTCCACAAGTTTGCGAGGCTaGCTGAACTGCATGAGGCTC +
Preference number: 5 (lower is better)
Translates to: CGPLSSRRPQGAPAPRRSTSLRG*LNCMRL
Trigger: GAGCCTCATGCAGTTCAGCAAGCCTCGCAAACTTGT...GGAGCGCCGAGGAGCGGGCGCCCCCTGTGGGCGGCGAGAGGAGAGAGGCCCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGTGCTCAGAGGGAATCTaGACCAGCCATGACAGAAAG +
Preference number: 5 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRCSEGI*TSHDRK
Trigger: CTTTCTGTCATGGCTGGTCAAGATTCCCTCTGAGCA...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTCTGCTTTTGGCAGCTGGCACTaGATGACCACATCCTCCACC +
Preference number: 5 (lower is better)
Translates to: GRPLLGAPLCRPPWPLSAFGSWH*MTTSST
Trigger: GGTGGAGGATGTGGTCATCAAGTGCCAGCTGCCAAA...AGCAGAGAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp TCCGGGGCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGATGGCCTCACGGCTCTaGGCACAGAGGCGTACGACC +
Preference number: 5 (lower is better)
Translates to: SGAGRPAMRPPPSMGKNPMASRL*AQRRTT
Trigger: GGTCGTACGCCTCTGTGCCAAGAGCCGTGAGGCCAT...CGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGCCCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CACAGGGGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCACAAGTTTGCGAGGCTaGCTGAACTGCATGAGGCTC +
Preference number: 5 (lower is better)
Translates to: HRGRPLLGAPLCRPPWPLTSLRG*LNCMRL
Trigger: GAGCCTCATGCAGTTCAGCAAGCCTCGCAAACTTGT...GAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCCCCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GCGCTGGGCCGGCCTCGCAGCGGTGCGGGCCTCTCTCCTCTCGCCGCCCACAGGACAGTGTTGACAAGTTaGCGAGGCTTGCTGAACTGC +
Preference number: 5 (lower is better)
Translates to: ALGRPRSGAGLSPLAAHRTVLTS*RGLLNC
Trigger: GCAGTTCAGCAAGCCTCGCAAACTTGTCAACACTGT...CCTGTGGGCGGCGAGAGGAGAGAGGCCCGCACCGCTGCGAGGCCGGCCCAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTCGCATGGCCTCACGGCTCTaGGCACAGAGGCGTACGACC +
Preference number: 5 (lower is better)
Translates to: PRLRGSGFSALPFPEASRMASRL*AQRRTT
Trigger: GGTCGTACGCCTCTGTGCCAAGAGCCGTGAGGCCAT...GCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp CCTGTGAAAAGGGCTGGGAGGCCACGTCCTGGCTGGCCTGGCTGTTaGGAAGGGTGGTCTGGCTGGGCCCAGGAAGCCCAAAGCGGTTCT +
Preference number: 5 (lower is better)
Translates to: PVKRAGRPRPGWPGC*EGWSGWAQEAQSGS
Trigger: AGAACCGCTTTGGGCTTCCTGGGCCCAGCCAGACCACCCTTCCCAACAGCCAGGCCAGCCAGGACGTGGCCTCCCAGCCCTTTTCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GGGCGCCCGCTCCTCGGCGCTCCGCTCTGTCGTCCTCCCTGGCCGCTCTCTGCTGTATTTCCTCGGCCATaGCAGAACCACTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GRPLLGAPLCRPPWPLSAVFPRP*QNHFLL
Trigger: CAGCAAGAAGTGGTTCTGCAATGGCCGAGGAAATAC...AGCAGAGAGCGGCCAGGGAGGACGACAGAGCGGAGCGCCGAGGAGCGGGCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGACGAGGATTAGCTGCTaGGCCCCAAGGACTACAGGC +
Preference number: 5 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVTRISC*APRTTG
Trigger: GCCTGTAGTCCTTGGGGCCAAGCAGCTAATCCTCGT...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCTGTGACAGTCCGGCCTaGGCTGCCTTCTTGCACATC +
Preference number: 5 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQACDSPA*AAFLHI
Trigger: GATGTGCAAGAAGGCAGCCAAGGCCGGACTGTCACA...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGGGGGTCCGGATGTCAGAGTCAGTCTaGGGCAAAGTGAAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: RRCAWVGVGWLPREVGVRMSESV*GKVKKA
Trigger: CGCCTTCTTCACTTTGCCCAAGACTGACTCTGACAT...CCGGACCCCCACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215817.2
CDS GCA 90 bp GTGCAGGGTGCATGCGGTATTGCACCTGCAGGCGGATGGGCCGGATaGCCAGCACCACCAAGCGCTCGAAGAGCGATTGTGACAGTCCGG +
Preference number: 5 (lower is better)
Translates to: VQGACGIAPAGGWAG*PAPPSARRAIVTVR
Trigger: CCGGACTGTCACAATCGCTCTTCGAGCGCTTGGTGGTGCTGGGCATCCGGCCCATCCGCCTGCAGGTGCAATACCGCATGCACCCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 90 bp TTGGACGGAAAGGCGCTGAGTGCAGGGTGCATGCGGTATTGCACCTaGAGGCGGATGGGCCGGATGCCCAGCACCACCAAGCGCTCGAAG +
Preference number: 5 (lower is better)
Translates to: LDGKALSAGCMRYCT*RRMGRMPSTTKRSK
Trigger: CTTCGAGCGCTTGGTGGTGCTGGGCATCCGGCCCATCCGCCTGCAGGTGCAATACCGCATGCACCCTGCACTCAGCGCCTTTCCGTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp TCCGGGGCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGTGCAGCGTCACTTCCTaGCATTTTGCCCTCACGAGG +
Preference number: 5 (lower is better)
Translates to: SGAGRPAMRPPPSMGKNPCSVTS*HFALTR
Trigger: CCTCGTGAGGGCAAAATGCAAGGAAGTGACGCTGCA...CGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGCCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp AAAACAAATCCTCCGGCTGCGGTGCAGGCGGTGATCCCAGGCTGCGGGGCTCAGGCCTTGGCTGCCTTCTaGCACATCACCACTGGGCCC +
Preference number: 5 (lower is better)
Translates to: KTNPPAAVQAVIPGCGAQALAAF*HITTGP
Trigger: GGGCCCAGTGGTGATGTGCAAGAAGGCAGCCAAGGC...CTGAGCCCCGCAGCCTGGGATCACCGCCTGCACCGCAGCCGGAGGATTTGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTTGTGACAGTCCGGCCTaGGCTGCCTTCTTGCACATC +
Preference number: 5 (lower is better)
Translates to: APSNEASTLDGEEPAGRACDSPA*AAFLHI
Trigger: GATGTGCAAGAAGGCAGCCAAGGCCGGACTGTCACA...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 90 bp GATGGGCCGGATGCCCAGCACCACCAAGCGCTCGAAGAGCGATTGTaGCAGTCCGGCCTTGGCTGCCTTCTTGCACATCACCACTGGGCC +
Preference number: 5 (lower is better)
Translates to: DGPDAQHHQALEERL*QSGLGCLLAHHHWA
Trigger: GGCCCAGTGGTGATGTGCAAGAAGGCAGCCAAGGCCGGACTGTCACAATCGCTCTTCGAGCGCTTGGTGGTGCTGGGCATCCGGCCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 90 bp GCTGGCTCATCTGAGAGGGCTGGCTCATGGACACGTAACCCTGTGTaGGGGCACCCTGTGAAAAGGGCTGGGAGGCCACGTCCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: AGSSERAGSWTRNPV*GHPVKRAGRPRPGW
Trigger: CCAGCCAGGACGTGGCCTCCCAGCCCTTTTCACAGGGTGCCCTCACACAGGGTTACGTGTCCATGAGCCAGCCCTCTCAGATGAGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 90 bp AAGATGTTGGACGGAAAGGCGCTGAGTGCAGGGTGCATGCGGTATTaGACCTGCAGGCGGATGGGCCGGATGCCCAGCACCACCAAGCGC +
Preference number: 5 (lower is better)
Translates to: KMLDGKALSAGCMRY*TCRRMGRMPSTTKR
Trigger: GCGCTTGGTGGTGCTGGGCATCCGGCCCATCCGCCTGCAGGTGCAATACCGCATGCACCCTGCACTCAGCGCCTTTCCGTCCAACATCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp GTCTGGCTGGGAAGGGTGAAGTCGGTGAATTCGAACTCGGAGCCCTaGGTGTCGGCGCCGAGCAGCTCGGCCTCCTCAGTGTCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: VWLGRVKSVNSNSEP*VSAPSSSASSVSKK
Trigger: CTTCTTGGACACTGAGGAGGCCGAGCTGCTCGGCGCCGACACCCAGGGCTCCGAGTTCGAATTCACCGACTTCACCCTTCCCAGCCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp GCAGCCACGTGGCTGGGGCCTGCGCTGATCATACTAATCTGGTCATaGGTCTGGAAGTACATGTTCGAGGGCCGGCCCTGGCTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: AATWLGPALIILIWS*VWKYMFEGRPWLLR
Trigger: CCGCAGCAGCCAGGGCCGGCCCTCGAACATGTACTTCCAGACCCATGACCAGATTAGTATGATCAGCGCAGGCCCCAGCCACGTGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp GCCCCGACCAGCTGCCGGCCCGTTGGCCTGTCCGAAGTAGCCAGGTaGCGGCATGGGAGGCATGACCAAGTTGAAGGGAATAGGGATGTT +
Preference number: 5 (lower is better)
Translates to: APTSCRPVGLSEVAR*RHGRHDQVEGNRDV
Trigger: AACATCCCTATTCCCTTCAACTTGGTCATGCCTCCCATGCCGCCACCTGGCTACTTCGGACAGGCCAACGGGCCGGCAGCTGGTCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTATCCACAGCCCCATTTaGCAAGATGCCCTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: APSNEASTLDGEEPAGRAIHSPI*QDALWS
Trigger: GGACCAGAGGGCATCTTGCAAAATGGGGCTGTGGAT...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCAAGGCGATTCTCTTCTaGTTAAGGCCCAGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQAKAILF*LRPRSH
Trigger: GTGGGACCTGGGCCTTAACAAGAAGAGAATCGCCTT...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTCGCTTTGGCAGCTGGCACTaGATGACCACATCCTCCACC +
Preference number: 5 (lower is better)
Translates to: PRLRGSGFSALPFPEASRFGSWH*MTTSST
Trigger: GGTGGAGGATGTGGTCATCAAGTGCCAGCTGCCAAA...GCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTTATCTTCTCCACATaGGCTGCCTCCGTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: AGRPAMRPPPSMGKNPQAVIFST*AASVLL
Trigger: CAACAGGACGGAGGCAGCCAATGTGGAGAAGATAAC...GGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTCGCCGATCTGGTCAGGCTTaGCACCTGCCTTCAACAGCT +
Preference number: 5 (lower is better)
Translates to: PRLRGSGFSALPFPEASRRSGQA*HLPSTA
Trigger: AGCTGTTGAAGGCAGGTGCAAAGCCTGACCAGATCG...GCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp AGTCCGGCCTTGGCTGCCTTCTTGCACATCACCACTGGGCCCAGCTaGCAGTGGTCACCGACGAGGATTAGCTGCTTGGCCCCAAGGACT +
Preference number: 5 (lower is better)
Translates to: SPALAAFLHITTGPS*QWSPTRISCLAPRT
Trigger: AGTCCTTGGGGCCAAGCAGCTAATCCTCGTCGGTGACCACTGCCAGCTGGGCCCAGTGGTGATGTGCAAGAAGGCAGCCAAGGCCGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp CCAGCACCACCAAGCGCTCGAAGAGCGATTGTGACAGTCCGGCCTTaGCTGCCTTCTTGCACATCACCACTGGGCCCAGCTGGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: PAPPSARRAIVTVRP*LPSCTSPLGPAGSG
Trigger: ACCACTGCCAGCTGGGCCCAGTGGTGATGTGCAAGAAGGCAGCCAAGGCCGGACTGTCACAATCGCTCTTCGAGCGCTTGGTGGTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCAGGCCGTGCTAAGGCGATTCTCTTCTaGTTAAGGCCCAGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: APSNEASTLDGEEPAGRAKAILF*LRPRSH
Trigger: GTGGGACCTGGGCCTTAACAAGAAGAGAATCGCCTT...AGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCGCCTTGGCTGCCTTCTaGCACATCACCACTGGGCCC +
Preference number: 5 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFALAAF*HITTGP
Trigger: GGGCCCAGTGGTGATGTGCAAGAAGGCAGCCAAGGC...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGCATAGGCTTGTCAGGTaGTGGCCACTGGAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVHRLVR*WPLEVK
Trigger: TTTGACTTCCAGTGGCCACAACCTGACAAGCCTATG...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp TCCGGGGCAGGGCGCCCAGCAATGAGGCCTCCACCCTCGATGGGGAAGAACCCGCATAGGCTTGTCAGGTaGTGGCCACTGGAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: SGAGRPAMRPPPSMGKNPHRLVR*WPLEVK
Trigger: TTTGACTTCCAGTGGCCACAACCTGACAAGCCTATG...CGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCTGGGCGCCCTGCCCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGACAGTGTTGACAAGTTaGCGAGGCTTGCTGAACTGC +
Preference number: 5 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVTVLTS*RGLLNC
Trigger: GCAGTTCAGCAAGCCTCGCAAACTTGTCAACACTGT...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 90 bp GCTGCCTGCACAACAGCACCACCACAGAGTCGGCCTTCGCAGGGATaGAGCCCAGCAGGAAGACGTTGCGGCAGCCACAGTTGTAGCACT +
Preference number: 5 (lower is better)
Translates to: AACTTAPPQSRPSQG*SPAGRRCGSHSCST
Trigger: AGTGCTACAACTGTGGCTGCCGCAACGTCTTCCTGCTGGGCTTCATCCCTGCGAAGGCCGACTCTGTGGTGGTGCTGTTGTGCAGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 90 bp GGCTCAGTGGCCTGGGTGCTCTCGTCAATGAGGATGGAACGGAACTaGATCTTGGCCAGCCTCGGGTCACCAGCACCCACACATGTGCAG +
Preference number: 5 (lower is better)
Translates to: GSVAWVLSSMRMERN*ILASLGSPAPTHVQ
Trigger: CTGCACATGTGTGGGTGCTGGTGACCCGAGGCTGGCCAAGATGCAGTTCCGTTCCATCCTCATTGACGAGAGCACCCAGGCCACTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp CTGAGAGTGGTTGAGGTCAGGGAGCCCCTGAGCTGTGAAGCGCTTTaGCAGCTGGCACTTGATGACCACATCCTCCACCTCGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LRVVEVREPLSCEAL*QLALDDHILHLVAQ
Trigger: CTGGGCCACGAGGTGGAGGATGTGGTCATCAAGTGCCAGCTGCCAAAGCGCTTCACAGCTCAGGGGCTCCCTGACCTCAACCACTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp GTTCTGGTACTGGTAAGCATCCTCGTAACGCAGGAGCACGTGCTGTaGCTCCTCGTCTACGCCTGGCTTCTCCAGGTCCTCCAGAGTGGC +
Preference number: 5 (lower is better)
Translates to: VLVLVSILVTQEHVL*LLVYAWLLQVLQSG
Trigger: GCCACTCTGGAGGACCTGGAGAAGCCAGGCGTAGACGAGGAGCCACAGCACGTGCTCCTGCGTTACGAGGATGCTTACCAGTACCAGAAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp TTCATGGCAGCCACGTGGCTGGGGCCTGCGCTGATCATACTAATCTaGTCATGGGTCTGGAAGTACATGTTCGAGGGCCGGCCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: FMAATWLGPALIILI*SWVWKYMFEGRPWL
Trigger: CAGCCAGGGCCGGCCCTCGAACATGTACTTCCAGACCCATGACCAGATTAGTATGATCAGCGCAGGCCCCAGCCACGTGGCTGCCATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCATCCACAGCCCCATTTaGCAAGATGCCCTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: GRPLGHRNAKFVLLKRSPIHSPI*QDALWS
Trigger: GGACCAGAGGGCATCTTGCAAAATGGGGCTGTGGAT...GGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGCAGCTGGCTGGTCTaGGCCACACTGTCATCCACA +
Preference number: 5 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFSSWLV*ATLSST
Trigger: TGTGGATGACAGTGTGGCCAAGACCAGCCAGCTGCT...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CCCAGGCTGCGGGGCTCAGGCTTCTCAGCGCTGCCTTTCCCGGAAGCTTCTCGCAAGTCAAAGCCTTTTTaGACACGATCCGCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: PRLRGSGFSALPFPEASRKSKPF*TRSAAV
Trigger: CACTGCAGCGGATCGTGTCAAAAAAGGCTTTGACTT...GCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCTGAGCCCCGCAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGGCTCTCACGTAGGTaGTTGAGCGGCCCTTCCACT +
Preference number: 5 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFRLSRR*LSGPST
Trigger: AGTGGAAGGGCCGCTCAACAACCTACGTGAGAGCCT...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 90 bp CATTCTGCAATGAGCCCTCGTAGAAGATGTTGGACGGAAAGGCGCTaGGTGCAGGGTGCATGCGGTATTGCACCTGCAGGCGGATGGGCC +
Preference number: 5 (lower is better)
Translates to: HSAMSPRRRCWTERR*VQGACGIAPAGGWA
Trigger: GGCCCATCCGCCTGCAGGTGCAATACCGCATGCACCCTGCACTCAGCGCCTTTCCGTCCAACATCTTCTACGAGGGCTCATTGCAGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 90 bp GCACGGTCTCGCCCAGAGGCCCGTCCTTGTGCAGCGTCACTTCCTTaGATTTTGCCCTCACGAGGTGATTCACAATGTGGCTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: ARSRPEARPCAASLP*ILPSRGDSQCGCQK
Trigger: CTTCTGGCAGCCACATTGTGAATCACCTCGTGAGGGCAAAATGCAAGGAAGTGACGCTGCACAAGGACGGGCCTCTGGGCGAGACCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp TTGGCCCCAAGGACTACAGGCACCATGCACTCAGGCTCAGTGGCCTaGGTGCTCTCGTCAATGAGGATGGAACGGAACTGCATCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LAPRTTGTMHSGSVA*VLSSMRMERNCILA
Trigger: GGCCAAGATGCAGTTCCGTTCCATCCTCATTGACGAGAGCACCCAGGCCACTGAGCCTGAGTGCATGGTGCCTGTAGTCCTTGGGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp TGGGACAGCCCGGTGACCCCGCCGTGCTGGTATGCCCGCTCTCCCTaGTATGTGGAGTCTTGTGAGAGTGCCACGTCAATCTGTGATTTA +
Preference number: 5 (lower is better)
Translates to: WDSPVTPPCWYARSP*YVESCESATSICDL
Trigger: TAAATCACAGATTGACGTGGCACTCTCACAAGACTCCACATACCAGGGAGAGCGGGCATACCAGCACGGCGGGGTCACCGGGCTGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp GCAAAGCCAGGAAGGACACTGGGGAGTCAATGGCCTCACGGCTCTTaGCACAGAGGCGTACGACCTTCAGTCCTGTCTGGTGGATCTTCT +
Preference number: 5 (lower is better)
Translates to: AKPGRTLGSQWPHGS*HRGVRPSVLSGGSS
Trigger: AGAAGATCCACCAGACAGGACTGAAGGTCGTACGCCTCTGTGCCAAGAGCCGTGAGGCCATTGACTCCCCAGTGTCCTTCCTGGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp GCTGTCCATGTTCCTGATCTGGTTGTGCAAAGCCAGGAAGGACACTaGGGAGTCAATGGCCTCACGGCTCTTGGCACAGAGGCGTACGAC +
Preference number: 5 (lower is better)
Translates to: AVHVPDLVVQSQEGH*GVNGLTALGTEAYD
Trigger: GTCGTACGCCTCTGTGCCAAGAGCCGTGAGGCCATTGACTCCCCAGTGTCCTTCCTGGCTTTGCACAACCAGATCAGGAACATGGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCTTACCAGAGTCAGTCTaGGGCAAAGTGAAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: GRPLGHRNAKFVLLKRSPLPESV*GKVKKA
Trigger: CGCCTTCTTCACTTTGCCCAAGACTGACTCTGGTAA...GGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075666.8
CDS-3UTR CAA 90 bp TTGCGTTGGCGCAGGTGTGCCTGGGTAGGGGTTGGGTGGCTGCCGCGGGAGGTGTCCTATCAAAAGAGGTaGACTTCCACACAAAATCCA +
Preference number: 5 (lower is better)
Translates to: LRWRRCAWVGVGWLPREVSYQKR*TSTQNP
Trigger: TGGATTTTGTGTGGAAGTCAACCTCTTTTGATAGGA...CACCTCCCGCGGCAGCCACCCAACCCCTACCCAGGCACACCTGCGCCAACGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCTCAATCACGAGGGTGCATGCGGTATaGCACCTGCAGGCGGATGGG +
Preference number: 5 (lower is better)
Translates to: LGHRNAKFVLLKRSPSITRVHAV*HLQADG
Trigger: CCCATCCGCCTGCAGGTGCAATACCGCATGCACCCT...CGTGATTGAGGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCACCCGGGTTGACAGTGTaGACAAGTTTGCGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: ALAPLSSPLLGCSHSGASPGLTV*TSLRGL
Trigger: CAAGCCTCGCAAACTTGTCAACACTGTCAACCCGGG...TGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 90 bp AGCTTCTGCAGCTCAGGCATGCTGTCCATGTTCCTGATCTGGTTGTaGAAAGCCAGGAAGGACACTGGGGAGTCAATGGCCTCACGGCTC +
Preference number: 5 (lower is better)
Translates to: SFCSSGMLSMFLIWL*KARKDTGESMASRL
Trigger: GAGCCGTGAGGCCATTGACTCCCCAGTGTCCTTCCTGGCTTTGCACAACCAGATCAGGAACATGGACAGCATGCCTGAGCTGCAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 90 bp GCGCTGGCCCTCGTAGGGGGTGATGATGCCGATCTGGTCAGGCTTTaGACCTGCCTTCAACAGCTTCGTAGTTATCTTCTCCACATTGGC +
Preference number: 5 (lower is better)
Translates to: ALALVGGDDADLVRL*TCLQQLRSYLLHIG
Trigger: GCCAATGTGGAGAAGATAACTACGAAGCTGTTGAAGGCAGGTGCAAAGCCTGACCAGATCGGCATCATCACCCCCTACGAGGGCCAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 90 bp GCACCCGGGTTGACAGTGTTGACAAGTTTGCGAGGCTTGCTGAACTaGATGAGGCTCTCACGTAGGTTGTTGAGCGGCCCTTCCACTAGC +
Preference number: 5 (lower is better)
Translates to: APGLTVLTSLRGLLN*MRLSRRLLSGPSTS
Trigger: GCTAGTGGAAGGGCCGCTCAACAACCTACGTGAGAGCCTCATGCAGTTCAGCAAGCCTCGCAAACTTGTCAACACTGTCAACCCGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp GCCTCACGGCTCTTGGCACAGAGGCGTACGACCTTCAGTCCTGTCTaGTGGATCTTCTCTGTGAGCTGGTCCACAGCGATGTTACTTGGA +
Preference number: 5 (lower is better)
Translates to: ASRLLAQRRTTFSPV*WIFSVSWSTAMLLG
Trigger: TCCAAGTAACATCGCTGTGGACCAGCTCACAGAGAAGATCCACCAGACAGGACTGAAGGTCGTACGCCTCTGTGCCAAGAGCCGTGAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GCTCCTGGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTTGCTCAGAGGGAATCTaGACCAGCCATGACAGAAAG +
Preference number: 5 (lower is better)
Translates to: APGRPLGHRNAKFVLLKRCSEGI*TSHDRK
Trigger: CTTTCTGTCATGGCTGGTCAAGATTCCCTCTGAGCA...ACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCCAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 90 bp CACATCCTCCACCTCGTGGCCCAGCAGCTTGTGGTAAATATACCCTaGCACAGAGGTCTCGTCCACAGCGAAGGTCTTCAGTGCACTCTG +
Preference number: 5 (lower is better)
Translates to: HILHLVAQQLVVNIP*HRGLVHSEGLQCTL
Trigger: CAGAGTGCACTGAAGACCTTCGCTGTGGACGAGACCTCTGTGTCAGGGTATATTTACCACAAGCTGCTGGGCCACGAGGTGGAGGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 90 bp AGAGCCACATTCAGACGCCGGGGGTCGTTTAGGAACCCAATGCCCTaGTGTTCATTGGCGCGCACGCAGGACAGAATGATGAAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: RATFRRRGSFRNPMP*CSLARTQDRMMKSF
Trigger: GAAGGACTTCATCATTCTGTCCTGCGTGCGCGCCAATGAACATCAGGGCATTGGGTTCCTAAACGACCCCCGGCGTCTGAATGTGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 90 bp CTCGCCCAGAGGCCCGTCCTTGTGCAGCGTCACTTCCTTGCATTTTaGCCTCACGAGGTGATTCACAATGTGGCTGCCAGAAGTATTTCC +
Preference number: 5 (lower is better)
Translates to: LAQRPVLVQRHFLAF*PHEVIHNVAARSIS
Trigger: GGAAATACTTCTGGCAGCCACATTGTGAATCACCTCGTGAGGGCAAAATGCAAGGAAGTGACGCTGCACAAGGACGGGCCTCTGGGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 90 bp GCCCTCGTAGGGGGTGATGATGCCGATCTGGTCAGGCTTTGCACCTaGCTTCAACAGCTTCGTAGTTATCTTCTCCACATTGGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: ALVGGDDADLVRLCT*LQQLRSYLLHIGCL
Trigger: GAGGCAGCCAATGTGGAGAAGATAACTACGAAGCTGTTGAAGGCAGGTGCAAAGCCTGACCAGATCGGCATCATCACCCCCTACGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp TGTCTGGTGGATCTTCTCTGTGAGCTGGTCCACAGCGATGTTACTTaGAGCACAAACCAGTACAGGCCCATTGCCCTGCCGAGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: CLVDLLCELVHSDVT*STNQYRPIALPSKV
Trigger: CACCTTGCTCGGCAGGGCAATGGGCCTGTACTGGTTTGTGCTCCAAGTAACATCGCTGTGGACCAGCTCACAGAGAAGATCCACCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp TCACGGCTCTTGGCACAGAGGCGTACGACCTTCAGTCCTGTCTGGTaGATCTTCTCTGTGAGCTGGTCCACAGCGATGTTACTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: SRLLAQRRTTFSPVW*IFSVSWSTAMLLGA
Trigger: TGCTCCAAGTAACATCGCTGTGGACCAGCTCACAGAGAAGATCCACCAGACAGGACTGAAGGTCGTACGCCTCTGTGCCAAGAGCCGTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp GTAGCTCAGCAGGTGATTCCACAGGGGCTGCTTCGACAGGGCCTTTaGGTTACCCACAATGATCACGCCATATCTTGCTCTGGTGAGAGC +
Preference number: 5 (lower is better)
Translates to: VAQQVIPQGLLRQGL*VTHNDHAISCSGES
Trigger: GCTCTCACCAGAGCAAGATATGGCGTGATCATTGTGGGTAACCCAAAGGCCCTGTCGAAGCAGCCCCTGTGGAATCACCTGCTGAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp GGCATGACCAAGTTGAAGGGAATAGGGATGTTCATGGCAGCCACGTaGCTGGGGCCTGCGCTGATCATACTAATCTGGTCATGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: GMTKLKGIGMFMAAT*LGPALIILIWSWVW
Trigger: CCAGACCCATGACCAGATTAGTATGATCAGCGCAGGCCCCAGCCACGTGGCTGCCATGAACATCCCTATTCCCTTCAACTTGGTCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CGCTCTCGCTCCTCTTTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCCCACACAAAATCCACTaGGAAGTTGTGGGTCACTTC +
Preference number: 5 (lower is better)
Translates to: RSRSSFLSSPRLLTQWCFPHKIH*EVVGHF
Trigger: GAAGTGACCCACAACTTCCAAGTGGATTTTGTGTGG...GAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAAAGAGGAGCGAGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 90 bp CGCTTCTCATCTGCAGATGACAGCTCGCCTGTCTCATCCTTTAGCTaGTGCAGCTTCTGCAGCTCAGGCATGCTGTCCATGTTCCTGATC +
Preference number: 5 (lower is better)
Translates to: RFSSADDSSPVSSFS*CSFCSSGMLSMFLI
Trigger: GATCAGGAACATGGACAGCATGCCTGAGCTGCAGAAGCTGCAGCAGCTAAAGGATGAGACAGGCGAGCTGTCATCTGCAGATGAGAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp AGGCGTACGACCTTCAGTCCTGTCTGGTGGATCTTCTCTGTGAGCTaGTCCACAGCGATGTTACTTGGAGCACAAACCAGTACAGGCCCA +
Preference number: 5 (lower is better)
Translates to: RRTTFSPVWWIFSVS*STAMLLGAQTSTGP
Trigger: TGGGCCTGTACTGGTTTGTGCTCCAAGTAACATCGCTGTGGACCAGCTCACAGAGAAGATCCACCAGACAGGACTGAAGGTCGTACGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 90 bp CACAGAGGCGTACGACCTTCAGTCCTGTCTGGTGGATCTTCTCTGTaGGCTGGTCCACAGCGATGTTACTTGGAGCACAAACCAGTACAG +
Preference number: 5 (lower is better)
Translates to: HRGVRPSVLSGGSSL*AGPQRCYLEHKPVQ
Trigger: CTGTACTGGTTTGTGCTCCAAGTAACATCGCTGTGGACCAGCTCACAGAGAAGATCCACCAGACAGGACTGAAGGTCGTACGCCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 90 bp TTCTCATCTGCAGATGACAGCTCGCCTGTCTCATCCTTTAGCTGCTaGAGCTTCTGCAGCTCAGGCATGCTGTCCATGTTCCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: FSSADDSSPVSSFSC*SFCSSGMLSMFLIW
Trigger: CCAGATCAGGAACATGGACAGCATGCCTGAGCTGCAGAAGCTGCAGCAGCTAAAGGATGAGACAGGCGAGCTGTCATCTGCAGATGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp GGCCGCCCGCTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCTCCTATCAAAAGAGGTaGACTTCCACACAAAATCCA +
Preference number: 5 (lower is better)
Translates to: GRPLGHRNAKFVLLKRSPSYQKR*TSTQNP
Trigger: TGGATTTTGTGTGGAAGTCAACCTCTTTTGATAGGA...GGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAGCGGGCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp TTCCTCTCCTCTCCTCGGCTGCTCACACAGTGGTGCTTCAGTTTTAGCAGTGGACCACACAAAATCCACTaGGAAGTTGTGGGTCACTTC +
Preference number: 5 (lower is better)
Translates to: FLSSPRLLTQWCFSFSSGPHKIH*EVVGHF
Trigger: GAAGTGACCCACAACTTCCAAGTGGATTTTGTGTGG...TCCACTGCTAAAACTGAAGCACCACTGTGTGAGCAGCCGAGGAGAGGAGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS-3UTR CAA 90 bp CTTGGGCACAGAAACGCGAAGTTCGTCCTGCTAAAACGTAGCCCCTCAATCACGAAGTCAAAGCCTTTTTaGACACGATCCGCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: LGHRNAKFVLLKRSPSITKSKPF*TRSAAV
Trigger: CACTGCAGCGGATCGTGTCAAAAAAGGCTTTGACTT...CGTGATTGAGGGGCTACGTTTTAGCAGGACGAACTTCGCGTTTCTGTGCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 90 bp TGTGGCTGCCAGAAGTATTTCCTCGGCCATTGCAGAACCACTTCTTaGTGGTATTACAGTAAACCACGCAGGCAGGATCATGGATTCCAC +
Preference number: 5 (lower is better)
Translates to: CGCQKYFLGHCRTTS*WYYSKPRRQDHGFH
Trigger: GTGGAATCCATGATCCTGCCTGCGTGGTTTACTGTAATACCAGCAAGAAGTGGTTCTGCAATGGCCGAGGAAATACTTCTGGCAGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 90 bp CGAGGTGATTCACAATGTGGCTGCCAGAAGTATTTCCTCGGCCATTaGAGAACCACTTCTTGCTGGTATTACAGTAAACCACGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RGDSQCGCQKYFLGH*RTTSCWYYSKPRRQ
Trigger: CTGCCTGCGTGGTTTACTGTAATACCAGCAAGAAGTGGTTCTGCAATGGCCGAGGAAATACTTCTGGCAGCCACATTGTGAATCACCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 90 bp CCTGACACAGAGGTCTCGTCCACAGCGAAGGTCTTCAGTGCACTCTaGATCCTATCAAAAGAGGTTGACTTCCACACAAAATCCACTTGG +
Preference number: 5 (lower is better)
Translates to: PDTEVSSTAKVFSAL*ILSKEVDFHTKSTW
Trigger: CCAAGTGGATTTTGTGTGGAAGTCAACCTCTTTTGATAGGATGCAGAGTGCACTGAAGACCTTCGCTGTGGACGAGACCTCTGTGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 90 bp GGCTGCCAGAAGTATTTCCTCGGCCATTGCAGAACCACTTCTTGCTaGTATTACAGTAAACCACGCAGGCAGGATCATGGATTCCACAGT +
Preference number: 5 (lower is better)
Translates to: GCQKYFLGHCRTTSC*YYSKPRRQDHGFHS
Trigger: ACTGTGGAATCCATGATCCTGCCTGCGTGGTTTACTGTAATACCAGCAAGAAGTGGTTCTGCAATGGCCGAGGAAATACTTCTGGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 90 bp CACAGCGAAGGTCTTCAGTGCACTCTGCATCCTATCAAAAGAGGTTaGCTTCCACACAAAATCCACTTGGAAGTTGTGGGTCACTTCCAC +
Preference number: 5 (lower is better)
Translates to: HSEGLQCTLHPIKRG*LPHKIHLEVVGHFH
Trigger: GTGGAAGTGACCCACAACTTCCAAGTGGATTTTGTGTGGAAGTCAACCTCTTTTGATAGGATGCAGAGTGCACTGAAGACCTTCGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp AGCCCCATTTTGCAAGATGCCCTCTGGTCCAACTTGTaGGTCGAGCTGGCCGGCCGCGCCGCCTGCGCCCGC +
Preference number: 6 (lower is better)
Translates to: SPILQDALWSNL*VELAGRAACAR
Trigger: GCGGGCGCAGGCGGCGCGGCCGGCCAGCTCGACGCACAAGTTGGACCAGAGGGCATCTTGCAAAATGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp CACCCTGTGAAAAGGGCTGGGAGGCCACGTCCTGGCTaGCCTGGCTGTTGGGAAGGGTGGTCTGGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: HPVKRAGRPRPG*PGCWEGWSGWA
Trigger: GGCCCAGCCAGACCACCCTTCCCAACAGCCAGGCCAGCCAGGACGTGGCCTCCCAGCCCTTTTCACAGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 72 bp CACAGCCCCATTTTGCAAGATGCCCTCTGGTCCAACTaGTGCGTCGAGCTGGCCGGCCGCGCCGCCTGCGCC +
Preference number: 6 (lower is better)
Translates to: HSPILQDALWSN*CVELAGRAACA
Trigger: GGCGCAGGCGGCGCGGCCGGCCAGCTCGACGCACAAGTTGGACCAGAGGGCATCTTGCAAAATGGGGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 90 bp CCCTGTGAAAAGGGCTGGGAGGCCACGTCCTGGCTGGCCTGGCTGTaGGGAAGGGTGGTCTGGCTGGGCCCAGGAAGCCCAAAGCGGTTC +
Preference number: 6 (lower is better)
Translates to: PCEKGWEATSWLAWL*GRVVWLGPGSPKRF
Trigger: GAACCGCTTTGGGCTTCCTGGGCCCAGCCAGACCACCCTTCCCAACAGCCAGGCCAGCCAGGACGTGGCCTCCCAGCCCTTTTCACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp GACGGAAAGGCGCTGAGTGCAGGGTGCATGCGGTATTaGACCTGCAGGCGGATGGGCCGGATGCCCAGCACC +
Preference number: 6 (lower is better)
Translates to: DGKALSAGCMRY*TCRRMGRMPST
Trigger: GGTGCTGGGCATCCGGCCCATCCGCCTGCAGGTGCAATACCGCATGCACCCTGCACTCAGCGCCTTTCCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 72 bp GGACGGAAAGGCGCTGAGTGCAGGGTGCATGCGGTATaGCACCTGCAGGCGGATGGGCCGGATGCCCAGCAC +
Preference number: 6 (lower is better)
Translates to: GRKGAECRVHAV*HLQADGPDAQH
Trigger: GTGCTGGGCATCCGGCCCATCCGCCTGCAGGTGCAATACCGCATGCACCCTGCACTCAGCGCCTTTCCGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 72 bp CGCCGAGCAGCTCGGCCTCCTCAGTGTCCAAGAAGGTaGGTGTTTGCGAGCTGGGGCCGTACGCCTCCACAC +
Preference number: 6 (lower is better)
Translates to: RRAARPPQCPRR*VFASWGRTPPH
Trigger: GTGTGGAGGCGTACGGCCCCAGCTCGCAAACACTCACCTTCTTGGACACTGAGGAGGCCGAGCTGCTCGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp AAGGCGCTGAGTGCAGGGTGCATGCGGTATTGCACCTaGAGGCGGATGGGCCGGATGCCCAGCACCACCAAG +
Preference number: 6 (lower is better)
Translates to: KALSAGCMRYCT*RRMGRMPSTTK
Trigger: CTTGGTGGTGCTGGGCATCCGGCCCATCCGCCTGCAGGTGCAATACCGCATGCACCCTGCACTCAGCGCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp GGAAGGGTGAAGTCGGTGAATTCGAACTCGGAGCCCTaGGTGTCGGCGCCGAGCAGCTCGGCCTCCTCAGTG +
Preference number: 6 (lower is better)
Translates to: GRVKSVNSNSEP*VSAPSSSASSV
Trigger: CACTGAGGAGGCCGAGCTGCTCGGCGCCGACACCCAGGGCTCCGAGTTCGAATTCACCGACTTCACCCTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp GTGCAGGGTGCATGCGGTATTGCACCTGCAGGCGGATaGGCCGGATGCCCAGCACCACCAAGCGCTCGAAGA +
Preference number: 6 (lower is better)
Translates to: VQGACGIAPAGG*AGCPAPPSARR
Trigger: TCTTCGAGCGCTTGGTGGTGCTGGGCATCCGGCCCATCCGCCTGCAGGTGCAATACCGCATGCACCCTGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp TGTCCTTCAGGCTGCTCTGGCTGGCACAGGGCTGCCTaGACAACAGCACCACCACAGAGTCGGCCTTCGCAG +
Preference number: 6 (lower is better)
Translates to: CPSGCSGWHRAA*TTAPPQSRPSQ
Trigger: CTGCGAAGGCCGACTCTGTGGTGGTGCTGTTGTGCAGGCAGCCCTGTGCCAGCCAGAGCAGCCTGAAGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 90 bp CCCAGCACCACCAAGCGCTCGAAGAGCGATTGTGACAGTCCGGCCTaGGCTGCCTTCTTGCACATCACCACTGGGCCCAGCTGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: PSTTKRSKSDCDSPA*AAFLHITTGPSWQW
Trigger: CCACTGCCAGCTGGGCCCAGTGGTGATGTGCAAGAAGGCAGCCAAGGCCGGACTGTCACAATCGCTCTTCGAGCGCTTGGTGGTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 90 bp GAAGATGTTGGACGGAAAGGCGCTGAGTGCAGGGTGCATGCGGTATaGCACCTGCAGGCGGATGGGCCGGATGCCCAGCACCACCAAGCG +
Preference number: 6 (lower is better)
Translates to: EDVGRKGAECRVHAV*HLQADGPDAQHHQA
Trigger: CGCTTGGTGGTGCTGGGCATCCGGCCCATCCGCCTGCAGGTGCAATACCGCATGCACCCTGCACTCAGCGCCTTTCCGTCCAACATCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 90 bp AAGCACCGGTCCTGGATTAGGGGCTGCCACTGTGAGCTGTCCCAGTaGATGTCCTTCAGGCTGCTCTGGCTGGCACAGGGCTGCCTGCAC +
Preference number: 6 (lower is better)
Translates to: KHRSWIRGCHCELSQ*MSFRLLWLAQGCLH
Trigger: GTGCAGGCAGCCCTGTGCCAGCCAGAGCAGCCTGAAGGACATCAACTGGGACAGCTCACAGTGGCAGCCCCTAATCCAGGACCGGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp CACTCCAGCACGGTCTCGCCCAGAGGCCCGTCCTTGTaGAGCGTCACTTCCTTGCATTTTGCCCTCACGAGG +
Preference number: 6 (lower is better)
Translates to: HSSTVSPRGPSL*SVTSLHFALTR
Trigger: CCTCGTGAGGGCAAAATGCAAGGAAGTGACGCTGCACAAGGACGGGCCTCTGGGCGAGACCGTGCTGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp AGCTGCCGGCCCGTTGGCCTGTCCGAAGTAGCCAGGTaGCGGCATGGGAGGCATGACCAAGTTGAAGGGAAT +
Preference number: 6 (lower is better)
Translates to: SCRPVGLSEVAR*RHGRHDQVEGN
Trigger: ATTCCCTTCAACTTGGTCATGCCTCCCATGCCGCCACCTGGCTACTTCGGACAGGCCAACGGGCCGGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp CCGGTGACCCCGCCGTGCTGGTATGCCCGCTCTCCCTaGTATGTGGAGTCTTGTGAGAGTGCCACGTCAATC +
Preference number: 6 (lower is better)
Translates to: PVTPPCWYARSP*YVESCESATSI
Trigger: GATTGACGTGGCACTCTCACAAGACTCCACATACCAGGGAGAGCGGGCATACCAGCACGGCGGGGTCACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 90 bp GCCGTGATCTGCCGTGCTCGCAGCTGCTCCTGCTCAGAGGGAATCTaGACCAGCCATGACAGAAAGCACCGGTCCTGGATTAGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: AVICRARSCSCSEGI*TSHDRKHRSWIRGC
Trigger: GCAGCCCCTAATCCAGGACCGGTGCTTTCTGTCATGGCTGGTCAAGATTCCCTCTGAGCAGGAGCAGCTGCGAGCACGGCAGATCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 72 bp ACAACAGCACCACCACAGAGTCGGCCTTCGCAGGGATaGAGCCCAGCAGGAAGACGTTGCGGCAGCCACAGT +
Preference number: 6 (lower is better)
Translates to: TTAPPQSRPSQG*SPAGRRCGSHS
Trigger: ACTGTGGCTGCCGCAACGTCTTCCTGCTGGGCTTCATCCCTGCGAAGGCCGACTCTGTGGTGGTGCTGTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp GCCTGGGTGCTCTCGTCAATGAGGATGGAACGGAACTaGATCTTGGCCAGCCTCGGGTCACCAGCACCCACA +
Preference number: 6 (lower is better)
Translates to: AWVLSSMRMERN*ILASLGSPAPT
Trigger: TGTGGGTGCTGGTGACCCGAGGCTGGCCAAGATGCAGTTCCGTTCCATCCTCATTGACGAGAGCACCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp CTGGTAAGCATCCTCGTAACGCAGGAGCACGTGCTGTaGCTCCTCGTCTACGCCTGGCTTCTCCAGGTCCTC +
Preference number: 6 (lower is better)
Translates to: LVSILVTQEHVL*LLVYAWLLQVL
Trigger: GAGGACCTGGAGAAGCCAGGCGTAGACGAGGAGCCACAGCACGTGCTCCTGCGTTACGAGGATGCTTACCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 72 bp TCCTGGATTAGGGGCTGCCACTGTGAGCTGTCCCAGTaGATGTCCTTCAGGCTGCTCTGGCTGGCACAGGGC +
Preference number: 6 (lower is better)
Translates to: SWIRGCHCELSQ*MSFRLLWLAQG
Trigger: GCCCTGTGCCAGCCAGAGCAGCCTGAAGGACATCAACTGGGACAGCTCACAGTGGCAGCCCCTAATCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 72 bp ACCAAGCGCTCGAAGAGCGATTGTGACAGTCCGGCCTaGGCTGCCTTCTTGCACATCACCACTGGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: TKRSKSDCDSPA*AAFLHITTGPS
Trigger: GCTGGGCCCAGTGGTGATGTGCAAGAAGGCAGCCAAGGCCGGACTGTCACAATCGCTCTTCGAGCGCTTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 72 bp TGCACTCAGGCTCAGTGGCCTGGGTGCTCTCGTCAATaGGGATGGAACGGAACTGCATCTTGGCCAGCCTCG +
Preference number: 6 (lower is better)
Translates to: CTQAQWPGCSRQ*GWNGTASWPAS
Trigger: CGAGGCTGGCCAAGATGCAGTTCCGTTCCATCCTCATTGACGAGAGCACCCAGGCCACTGAGCCTGAGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp GGATTAGCTGCTTGGCCCCAAGGACTACAGGCACCATaGACTCAGGCTCAGTGGCCTGGGTGCTCTCGTCAA +
Preference number: 6 (lower is better)
Translates to: GLAAWPQGLQAP*TQAQWPGCSRQ
Trigger: TTGACGAGAGCACCCAGGCCACTGAGCCTGAGTGCATGGTGCCTGTAGTCCTTGGGGCCAAGCAGCTAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp GTTGAGGTCAGGGAGCCCCTGAGCTGTGAAGCGCTTTaGCAGCTGGCACTTGATGACCACATCCTCCACCTC +
Preference number: 6 (lower is better)
Translates to: VEVREPLSCEAL*QLALDDHILHL
Trigger: GAGGTGGAGGATGTGGTCATCAAGTGCCAGCTGCCAAAGCGCTTCACAGCTCAGGGGCTCCCTGACCTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp GGAAGGACACTGGGGAGTCAATGGCCTCACGGCTCTTaGCACAGAGGCGTACGACCTTCAGTCCTGTCTGGT +
Preference number: 6 (lower is better)
Translates to: GRTLGSQWPHGS*HRGVRPSVLSG
Trigger: ACCAGACAGGACTGAAGGTCGTACGCCTCTGTGCCAAGAGCCGTGAGGCCATTGACTCCCCAGTGTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp GGTTGTGCAAAGCCAGGAAGGACACTGGGGAGTCAATaGCCTCACGGCTCTTGGCACAGAGGCGTACGACCT +
Preference number: 6 (lower is better)
Translates to: GCAKPGRTLGSQ*PHGSWHRGVRP
Trigger: AGGTCGTACGCCTCTGTGCCAAGAGCCGTGAGGCCATTGACTCCCCAGTGTCCTTCCTGGCTTTGCACAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp GGGCCTGCGCTGATCATACTAATCTGGTCATGGGTCTaGAAGTACATGTTCGAGGGCCGGCCCTGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GPALIILIWSWV*KYMFEGRPWLL
Trigger: CAGCAGCCAGGGCCGGCCCTCGAACATGTACTTCCAGACCCATGACCAGATTAGTATGATCAGCGCAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp TGGCTGGGGCCTGCGCTGATCATACTAATCTGGTCATaGGTCTGGAAGTACATGTTCGAGGGCCGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: WLGPALIILIWS*VWKYMFEGRPW
Trigger: CCAGGGCCGGCCCTCGAACATGTACTTCCAGACCCATGACCAGATTAGTATGATCAGCGCAGGCCCCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp GCCACGTGGCTGGGGCCTGCGCTGATCATACTAATCTaGTCATGGGTCTGGAAGTACATGTTCGAGGGCCGG +
Preference number: 6 (lower is better)
Translates to: ATWLGPALIILI*SWVWKYMFEGR
Trigger: CCGGCCCTCGAACATGTACTTCCAGACCCATGACCAGATTAGTATGATCAGCGCAGGCCCCAGCCACGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 72 bp AAGAGCGATTGTGACAGTCCGGCCTTGGCTGCCTTCTaGCACATCACCACTGGGCCCAGCTGGCAGTGGTCA +
Preference number: 6 (lower is better)
Translates to: KSDCDSPALAAF*HITTGPSWQWS
Trigger: TGACCACTGCCAGCTGGGCCCAGTGGTGATGTGCAAGAAGGCAGCCAAGGCCGGACTGTCACAATCGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 90 bp GTGGCCTGGGTGCTCTCGTCAATGAGGATGGAACGGAACTGCATCTaGGCCAGCCTCGGGTCACCAGCACCCACACATGTGCAGCATATG +
Preference number: 6 (lower is better)
Translates to: VAWVLSSMRMERNCI*ASLGSPAPTHVQHM
Trigger: CATATGCTGCACATGTGTGGGTGCTGGTGACCCGAGGCTGGCCAAGATGCAGTTCCGTTCCATCCTCATTGACGAGAGCACCCAGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 72 bp ATGAGCCCTCGTAGAAGATGTTGGACGGAAAGGCGCTaGGTGCAGGGTGCATGCGGTATTGCACCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: MSPRRRCWTERR*VQGACGIAPAG
Trigger: GCCTGCAGGTGCAATACCGCATGCACCCTGCACTCAGCGCCTTTCCGTCCAACATCTTCTACGAGGGCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp CGCCCAGAGGCCCGTCCTTGTGCAGCGTCACTTCCTTaGATTTTGCCCTCACGAGGTGATTCACAATGTGGC +
Preference number: 6 (lower is better)
Translates to: RPEARPCAASLP*ILPSRGDSQCG
Trigger: GCCACATTGTGAATCACCTCGTGAGGGCAAAATGCAAGGAAGTGACGCTGCACAAGGACGGGCCTCTGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp TTGATCTGCTGTGCCGTGATCTGCCGTGCTCGCAGCTaGTCCTGCTCAGAGGGAATCTTGACCAGCCATGAC +
Preference number: 6 (lower is better)
Translates to: LICCAVICRARS*SCSEGILTSHD
Trigger: GTCATGGCTGGTCAAGATTCCCTCTGAGCAGGAGCAGCTGCGAGCACGGCAGATCACGGCACAGCAGATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp CCCCGCCGTGCTGGTATGCCCGCTCTCCCTGGTATGTaGAGTCTTGTGAGAGTGCCACGTCAATCTGTGATT +
Preference number: 6 (lower is better)
Translates to: PRRAGMPALPGM*SLVRVPRQSVI
Trigger: AATCACAGATTGACGTGGCACTCTCACAAGACTCCACATACCAGGGAGAGCGGGCATACCAGCACGGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 72 bp CGAGGCTTGCTGAACTGCATGAGGCTCTCACGTAGGTaGTTGAGCGGCCCTTCCACTAGCGCCTTCTGTTCC +
Preference number: 6 (lower is better)
Translates to: RGLLNCMRLSRR*LSGPSTSAFCS
Trigger: GGAACAGAAGGCGCTAGTGGAAGGGCCGCTCAACAACCTACGTGAGAGCCTCATGCAGTTCAGCAAGCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 90 bp ATGAAGCGGGCACCCGGGTTGACAGTGTTGACAAGTTTGCGAGGCTaGCTGAACTGCATGAGGCTCTCACGTAGGTTGTTGAGCGGCCCT +
Preference number: 6 (lower is better)
Translates to: MKRAPGLTVLTSLRG*LNCMRLSRRLLSGP
Trigger: AGGGCCGCTCAACAACCTACGTGAGAGCCTCATGCAGTTCAGCAAGCCTCGCAAACTTGTCAACACTGTCAACCCGGGTGCCCGCTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 72 bp CCACTTCCTGGTAGAGCTTTGTGTGCAGGGAGCCGCTaGACTGCATGTACTGCACCAAGTAAGAGCGCTGGC +
Preference number: 6 (lower is better)
Translates to: PLPGRALCAGSR*TACTAPSKSAG
Trigger: GCCAGCGCTCTTACTTGGTGCAGTACATGCAGTTCAGCGGCTCCCTGCACACAAAGCTCTACCAGGAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 72 bp TTCAGACGCCGGGGGTCGTTTAGGAACCCAATGCCCTaGTGTTCATTGGCGCGCACGCAGGACAGAATGATG +
Preference number: 6 (lower is better)
Translates to: FRRRGSFRNPMP*CSLARTQDRMM
Trigger: CATCATTCTGTCCTGCGTGCGCGCCAATGAACATCAGGGCATTGGGTTCCTAAACGACCCCCGGCGTCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp TTCCAGCTTGTTGATCTGCTGTGCCGTGATCTGCCGTaGTCGCAGCTGCTCCTGCTCAGAGGGAATCTTGAC +
Preference number: 6 (lower is better)
Translates to: FQLVDLLCRDLP*SQLLLLRGNLD
Trigger: GTCAAGATTCCCTCTGAGCAGGAGCAGCTGCGAGCACGGCAGATCACGGCACAGCAGATCAACAAGCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp GGCCTTTGGGTTACCCACAATGATCACGCCATATCTTaGTCTGGTGAGAGCCACATTCAGACGCCGGGGGTC +
Preference number: 6 (lower is better)
Translates to: GLWVTHNDHAIS*SGESHIQTPGV
Trigger: GACCCCCGGCGTCTGAATGTGGCTCTCACCAGAGCAAGATATGGCGTGATCATTGTGGGTAACCCAAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp GGAATCTTGACCAGCCATGACAGAAAGCACCGGTCCTaGATTAGGGGCTGCCACTGTGAGCTGTCCCAGTTG +
Preference number: 6 (lower is better)
Translates to: GILTSHDRKHRS*IRGCHCELSQL
Trigger: CAACTGGGACAGCTCACAGTGGCAGCCCCTAATCCAGGACCGGTGCTTTCTGTCATGGCTGGTCAAGATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp CCTCGTCTACGCCTGGCTTCTCCAGGTCCTCCAGAGTaGCTGAAGGATTTTCCTTCCAGAGCTCTTCCAGCT +
Preference number: 6 (lower is better)
Translates to: PRLRLASPGPPE*LKDFPSRALPA
Trigger: AGCTGGAAGAGCTCTGGAAGGAAAATCCTTCAGCCACTCTGGAGGACCTGGAGAAGCCAGGCGTAGACGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp CTCTTGGCACAGAGGCGTACGACCTTCAGTCCTGTCTaGTGGATCTTCTCTGTGAGCTGGTCCACAGCGATG +
Preference number: 6 (lower is better)
Translates to: LLAQRRTTFSPV*WIFSVSWSTAM
Trigger: CATCGCTGTGGACCAGCTCACAGAGAAGATCCACCAGACAGGACTGAAGGTCGTACGCCTCTGTGCCAAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp GTTCCTGATCTGGTTGTGCAAAGCCAGGAAGGACACTaGGGAGTCAATGGCCTCACGGCTCTTGGCACAGAG +
Preference number: 6 (lower is better)
Translates to: VPDLVVQSQEGH*GVNGLTALGTE
Trigger: CTCTGTGCCAAGAGCCGTGAGGCCATTGACTCCCCAGTGTCCTTCCTGGCTTTGCACAACCAGATCAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 72 bp GAGGCCCGTCCTTGTGCAGCGTCACTTCCTTGCATTTaGCCCTCACGAGGTGATTCACAATGTGGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: EARPCAASLPCI*PSRGDSQCGCQ
Trigger: CTGGCAGCCACATTGTGAATCACCTCGTGAGGGCAAAATGCAAGGAAGTGACGCTGCACAAGGACGGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 72 bp GGCTTGCTGAACTGCATGAGGCTCTCACGTAGGTTGTaGAGCGGCCCTTCCACTAGCGCCTTCTGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: GLLNCMRLSRRL*SGPSTSAFCSL
Trigger: CAAGGAACAGAAGGCGCTAGTGGAAGGGCCGCTCAACAACCTACGTGAGAGCCTCATGCAGTTCAGCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 72 bp CACCTCGTGGCCCAGCAGCTTGTGGTAAATATACCCTaGCACAGAGGTCTCGTCCACAGCGAAGGTCTTCAG +
Preference number: 6 (lower is better)
Translates to: HLVAQQLVVNIP*HRGLVHSEGLQ
Trigger: CTGAAGACCTTCGCTGTGGACGAGACCTCTGTGTCAGGGTATATTTACCACAAGCTGCTGGGCCACGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp AGCTCAGGCATGCTGTCCATGTTCCTGATCTGGTTGTaGAAAGCCAGGAAGGACACTGGGGAGTCAATGGCC +
Preference number: 6 (lower is better)
Translates to: SSGMLSMFLIWL*KARKDTGESMA
Trigger: GGCCATTGACTCCCCAGTGTCCTTCCTGGCTTTGCACAACCAGATCAGGAACATGGACAGCATGCCTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp GCAGATGACAGCTCGCCTGTCTCATCCTTTAGCTGCTaGAGCTTCTGCAGCTCAGGCATGCTGTCCATGTTC +
Preference number: 6 (lower is better)
Translates to: ADDSSPVSSFSC*SFCSSGMLSMF
Trigger: GAACATGGACAGCATGCCTGAGCTGCAGAAGCTGCAGCAGCTAAAGGATGAGACAGGCGAGCTGTCATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp TCTGCAGATGACAGCTCGCCTGTCTCATCCTTTAGCTaGTGCAGCTTCTGCAGCTCAGGCATGCTGTCCATG +
Preference number: 6 (lower is better)
Translates to: SADDSSPVSSFS*CSFCSSGMLSM
Trigger: CATGGACAGCATGCCTGAGCTGCAGAAGCTGCAGCAGCTAAAGGATGAGACAGGCGAGCTGTCATCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp GATCTTCTCTGTGAGCTGGTCCACAGCGATGTTACTTaGAGCACAAACCAGTACAGGCCCATTGCCCTGCCG +
Preference number: 6 (lower is better)
Translates to: DLLCELVHSDVT*STNQYRPIALP
Trigger: CGGCAGGGCAATGGGCCTGTACTGGTTTGTGCTCCAAGTAACATCGCTGTGGACCAGCTCACAGAGAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 72 bp ATGAAGCGGGCACCCGGGTTGACAGTGTTGACAAGTTaGCGAGGCTTGCTGAACTGCATGAGGCTCTCACGT +
Preference number: 6 (lower is better)
Translates to: MKRAPGLTVLTS*RGLLNCMRLSR
Trigger: ACGTGAGAGCCTCATGCAGTTCAGCAAGCCTCGCAAACTTGTCAACACTGTCAACCCGGGTGCCCGCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 72 bp GCAGTAGTCATGAAGCGGGCACCCGGGTTGACAGTGTaGACAAGTTTGCGAGGCTTGCTGAACTGCATGAGG +
Preference number: 6 (lower is better)
Translates to: AVVMKRAPGLTV*TSLRGLLNCMR
Trigger: CCTCATGCAGTTCAGCAAGCCTCGCAAACTTGTCAACACTGTCAACCCGGGTGCCCGCTTCATGACTACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 90 bp TCTCGCCCAGAGGCCCGTCCTTGTGCAGCGTCACTTCCTTGCATTTaGCCCTCACGAGGTGATTCACAATGTGGCTGCCAGAAGTATTTC +
Preference number: 6 (lower is better)
Translates to: SRPEARPCAASLPCI*PSRGDSQCGCQKYF
Trigger: GAAATACTTCTGGCAGCCACATTGTGAATCACCTCGTGAGGGCAAAATGCAAGGAAGTGACGCTGCACAAGGACGGGCCTCTGGGCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 90 bp GCAGTAGTCATGAAGCGGGCACCCGGGTTGACAGTGTTGACAAGTTaGCGAGGCTTGCTGAACTGCATGAGGCTCTCACGTAGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: AVVMKRAPGLTVLTS*RGLLNCMRLSRRLL
Trigger: CAACAACCTACGTGAGAGCCTCATGCAGTTCAGCAAGCCTCGCAAACTTGTCAACACTGTCAACCCGGGTGCCCGCTTCATGACTACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 72 bp GTCTACGCCTGGCTTCTCCAGGTCCTCCAGAGTGGCTaGAGGATTTTCCTTCCAGAGCTCTTCCAGCTTGTT +
Preference number: 6 (lower is better)
Translates to: VYAWLLQVLQSG*RIFLPELFQLV
Trigger: AACAAGCTGGAAGAGCTCTGGAAGGAAAATCCTTCAGCCACTCTGGAGGACCTGGAGAAGCCAGGCGTAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 72 bp TTTGACACGATCCGCTGCAGTGACGCCATTCTGCAATaGGCCCTCGTAGAAGATGTTGGACGGAAAGGCGCT +
Preference number: 6 (lower is better)
Translates to: FDTIRCSDAILQ*ALVEDVGRKGA
Trigger: AGCGCCTTTCCGTCCAACATCTTCTACGAGGGCTCATTGCAGAATGGCGTCACTGCAGCGGATCGTGTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp TTGGCACAGAGGCGTACGACCTTCAGTCCTGTCTGGTaGATCTTCTCTGTGAGCTGGTCCACAGCGATGTTA +
Preference number: 6 (lower is better)
Translates to: LAQRRTTFSPVW*IFSVSWSTAML
Trigger: TAACATCGCTGTGGACCAGCTCACAGAGAAGATCCACCAGACAGGACTGAAGGTCGTACGCCTCTGTGCCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp CAGGTGATTCCACAGGGGCTGCTTCGACAGGGCCTTTaGGTTACCCACAATGATCACGCCATATCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: QVIPQGLLRQGL*VTHNDHAISCS
Trigger: AGAGCAAGATATGGCGTGATCATTGTGGGTAACCCAAAGGCCCTGTCGAAGCAGCCCCTGTGGAATCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 72 bp GCACCCGGGTTGACAGTGTTGACAAGTTTGCGAGGCTaGCTGAACTGCATGAGGCTCTCACGTAGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: APGLTVLTSLRG*LNCMRLSRRLL
Trigger: CAACAACCTACGTGAGAGCCTCATGCAGTTCAGCAAGCCTCGCAAACTTGTCAACACTGTCAACCCGGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp CTCGTAGGGGGTGATGATGCCGATCTGGTCAGGCTTTaGACCTGCCTTCAACAGCTTCGTAGTTATCTTCTC +
Preference number: 6 (lower is better)
Translates to: LVGGDDADLVRL*TCLQQLRSYLL
Trigger: GAGAAGATAACTACGAAGCTGTTGAAGGCAGGTGCAAAGCCTGACCAGATCGGCATCATCACCCCCTACGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp TTGACAGTGTTGACAAGTTTGCGAGGCTTGCTGAACTaGATGAGGCTCTCACGTAGGTTGTTGAGCGGCCCT +
Preference number: 6 (lower is better)
Translates to: LTVLTSLRGLLN*MRLSRRLLSGP
Trigger: AGGGCCGCTCAACAACCTACGTGAGAGCCTCATGCAGTTCAGCAAGCCTCGCAAACTTGTCAACACTGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp AGATCCCCTTTGTACCGCAGACAGATCTCATCACCCTaGATGAGCCGCATGTCAGAGTCAGTCTTGGGCAAA +
Preference number: 6 (lower is better)
Translates to: RSPLYRRQISSP*MSRMSESVLGK
Trigger: TTTGCCCAAGACTGACTCTGACATGCGGCTCATGCAGGGTGATGAGATCTGTCTGCGGTACAAAGGGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215817.2
CDS CCA 72 bp AAGTTGAAGGGAATAGGGATGTTCATGGCAGCCACGTaGCTGGGGCCTGCGCTGATCATACTAATCTGGTCA +
Preference number: 6 (lower is better)
Translates to: KLKGIGMFMAAT*LGPALIILIWS
Trigger: TGACCAGATTAGTATGATCAGCGCAGGCCCCAGCCACGTGGCTGCCATGAACATCCCTATTCCCTTCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 72 bp AAAGAGGTTGACTTCCACACAAAATCCACTTGGAAGTaGTGGGTCACTTCCACAGGGGCACCCACGCTGCTG +
Preference number: 6 (lower is better)
Translates to: KEVDFHTKSTWK*WVTSTGAPTLL
Trigger: CAGCAGCGTGGGTGCCCCTGTGGAAGTGACCCACAACTTCCAAGTGGATTTTGTGTGGAAGTCAACCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 90 bp AACATAGGCTTGTCAGGTTGTGGCCACTGGAAGTCAAAGCCTTTTTaGACACGATCCGCTGCAGTGACGCCATTCTGCAATGAGCCCTCG +
Preference number: 6 (lower is better)
Translates to: NIGLSGCGHWKSKPF*TRSAAVTPFCNEPS
Trigger: CGAGGGCTCATTGCAGAATGGCGTCACTGCAGCGGATCGTGTCAAAAAAGGCTTTGACTTCCAGTGGCCACAACCTGACAAGCCTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 72 bp TGCAGCGTCACTTCCTTGCATTTTGCCCTCACGAGGTaGTTCACAATGTGGCTGCCAGAAGTATTTCCTCGG +
Preference number: 6 (lower is better)
Translates to: CSVTSLHFALTR*FTMWLPEVFPR
Trigger: CCGAGGAAATACTTCTGGCAGCCACATTGTGAATCACCTCGTGAGGGCAAAATGCAAGGAAGTGACGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS TCA 72 bp GTACGACCTTCAGTCCTGTCTGGTGGATCTTCTCTGTaGGCTGGTCCACAGCGATGTTACTTGGAGCACAAA +
Preference number: 6 (lower is better)
Translates to: VRPSVLSGGSSL*AGPQRCYLEHK
Trigger: TTTGTGCTCCAAGTAACATCGCTGTGGACCAGCTCACAGAGAAGATCCACCAGACAGGACTGAAGGTCGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp CTTCAACAGCTTCGTAGTTATCTTCTCCACATTGGCTaGCTCCGTCCTGTTGAGGTAGGATGTGCCAGAGCT +
Preference number: 6 (lower is better)
Translates to: LQQLRSYLLHIG*LRPVEVGCARA
Trigger: AGCTCTGGCACATCCTACCTCAACAGGACGGAGGCAGCCAATGTGGAGAAGATAACTACGAAGCTGTTGAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp GGGGGTGATGATGCCGATCTGGTCAGGCTTTGCACCTaGCTTCAACAGCTTCGTAGTTATCTTCTCCACATT +
Preference number: 6 (lower is better)
Translates to: GGDDADLVRLCT*LQQLRSYLLHI
Trigger: AATGTGGAGAAGATAACTACGAAGCTGTTGAAGGCAGGTGCAAAGCCTGACCAGATCGGCATCATCACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp CAACTTCTTGTCATAGTCAGCCTCCAGCTTGACCAGTaGCCCGAAGATGTTCTGGTACTGGTAAGCATCCTC +
Preference number: 6 (lower is better)
Translates to: QLLVIVSLQLDQ*PEDVLVLVSIL
Trigger: GAGGATGCTTACCAGTACCAGAACATCTTCGGGCCACTGGTCAAGCTGGAGGCTGACTATGACAAGAAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CCA 72 bp ACCTTCAGTCCTGTCTGGTGGATCTTCTCTGTGAGCTaGTCCACAGCGATGTTACTTGGAGCACAAACCAGT +
Preference number: 6 (lower is better)
Translates to: TFSPVWWIFSVS*STAMLLGAQTS
Trigger: ACTGGTTTGTGCTCCAAGTAACATCGCTGTGGACCAGCTCACAGAGAAGATCCACCAGACAGGACTGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 72 bp TTGTCAGGTTGTGGCCACTGGAAGTCAAAGCCTTTTTaGACACGATCCGCTGCAGTGACGCCATTCTGCAAT +
Preference number: 6 (lower is better)
Translates to: LSGCGHWKSKPF*TRSAAVTPFCN
Trigger: ATTGCAGAATGGCGTCACTGCAGCGGATCGTGTCAAAAAAGGCTTTGACTTCCAGTGGCCACAACCTGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp GAGGTCTCGTCCACAGCGAAGGTCTTCAGTGCACTCTaGATCCTATCAAAAGAGGTTGACTTCCACACAAAA +
Preference number: 6 (lower is better)
Translates to: EVSSTAKVFSAL*ILSKEVDFHTK
Trigger: TTTTGTGTGGAAGTCAACCTCTTTTGATAGGATGCAGAGTGCACTGAAGACCTTCGCTGTGGACGAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 90 bp CCACAGCGAAGGTCTTCAGTGCACTCTGCATCCTATCAAAAGAGGTaGACTTCCACACAAAATCCACTTGGAAGTTGTGGGTCACTTCCA +
Preference number: 6 (lower is better)
Translates to: PQRRSSVHSASYQKR*TSTQNPLGSCGSLP
Trigger: TGGAAGTGACCCACAACTTCCAAGTGGATTTTGTGTGGAAGTCAACCTCTTTTGATAGGATGCAGAGTGCACTGAAGACCTTCGCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp CAGAAGTATTTCCTCGGCCATTGCAGAACCACTTCTTaGTGGTATTACAGTAAACCACGCAGGCAGGATCAT +
Preference number: 6 (lower is better)
Translates to: QKYFLGHCRTTS*WYYSKPRRQDH
Trigger: ATGATCCTGCCTGCGTGGTTTACTGTAATACCAGCAAGAAGTGGTTCTGCAATGGCCGAGGAAATACTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS GCA 72 bp AGATCCCCTTTGTACCGCAGACAGATCTCATCACCCTaGATGAGCCGCATGTCTCTTAACCAAATTATGACT +
Preference number: 6 (lower is better)
Translates to: RSPLYRRQISSP*MSRMSLNQIMT
Trigger: AGTCATAATTTGGTTAAGAGACATGCGGCTCATGCAGGGTGATGAGATCTGTCTGCGGTACAAAGGGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075666.8
CDS GCA 72 bp TCACAATGTGGCTGCCAGAAGTATTTCCTCGGCCATTaGAGAACCACTTCTTGCTGGTATTACAGTAAACCA +
Preference number: 6 (lower is better)
Translates to: SQCGCQKYFLGH*RTTSCWYYSKP
Trigger: TGGTTTACTGTAATACCAGCAAGAAGTGGTTCTGCAATGGCCGAGGAAATACTTCTGGCAGCCACATTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 72 bp AGGTCTTCAGTGCACTCTGCATCCTATCAAAAGAGGTaGACTTCCACACAAAATCCACTTGGAAGTTGTGGG +
Preference number: 6 (lower is better)
Translates to: RSSVHSASYQKR*TSTQNPLGSCG
Trigger: CCCACAACTTCCAAGTGGATTTTGTGTGGAAGTCAACCTCTTTTGATAGGATGCAGAGTGCACTGAAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075666.8
ENSMUST00000215817.2
CDS CAA 90 bp TCTCTTAACCAAATTATGACTAAATCCTCATTACCAGAGTCAGTCTaGGGCAAAGTGAAGAAGGCGATTCTCTTCTTGTTAAGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: SLNQIMTKSSLPESV*GKVKKAILFLLRPR
Trigger: CCTGGGCCTTAACAAGAAGAGAATCGCCTTCTTCACTTTGCCCAAGACTGACTCTGGTAATGAGGATTTAGTCATAATTTGGTTAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075666.8
CDS CAA 72 bp CAAATTATGACTAAATCCTCATTACCAGAGTCAGTCTaGGGCAAAGTGAAGAAGGCGATTCTCTTCTTGTTA +
Preference number: 6 (lower is better)
Translates to: QIMTKSSLPESV*GKVKKAILFLL
Trigger: TAACAAGAAGAGAATCGCCTTCTTCACTTTGCCCAAGACTGACTCTGGTAATGAGGATTTAGTCATAATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075666.8