Pregenerated sensors for UOX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028186Ensembl transcript IDs: ENSMUST00000029837.14, ENSMUST00000121133.2, ENSMUST00000147409.2, ENSMUST00000199489.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCGGCTGGAGCCATGACGTCACAGCCTGGAAGGCAGCTTCCTCTTaGCTGTCCCTGTTATTTTGCCGTAGGGATTGTCGAGAGGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: TGWSHDVTAWKAASS*LSLLFCRRDCREAA Trigger: TGCTGCCTCTCGACAATCCCTACGGCAAAATAACAGGGACAGTCAAGAGGAAGCTGCCTTCCAGGCTGTGACGTCATGGCTCCAGCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| 3UTR CCA 90 bp | AATGTGGCGGCAGCCAGTACTTTACGATTATGTCCTTATGACAATTaGATTCTAAAGACGGATTCAAAGGCAGAGAACACAAGAACAGCA | + |
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Preference number: 1 (lower is better) Translates to: NVAAASTLRLCPYDN*ILKTDSKAENTRTA Trigger: TGCTGTTCTTGTGTTCTCTGCCTTTGAATCCGTCTTTAGAATCCAATTGTCATAAGGACATAATCGTAAAGTACTGGCTGCCGCCACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR TCA 90 bp | ATTAATCAATGTGGCGGCAGCCAGTACTTTACGATTATGTCCTTATaGCAATTGGATTCTAAAGACGGATTCAAAGGCAGAGAACACAAG | + |
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Preference number: 1 (lower is better) Translates to: INQCGGSQYFTIMSL*QLDSKDGFKGREHK Trigger: CTTGTGTTCTCTGCCTTTGAATCCGTCTTTAGAATCCAATTGTCATAAGGACATAATCGTAAAGTACTGGCTGCCGCCACATTGATTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR TCA 90 bp | CAAAGCAATTACTTCATACAGAACAAAGCAATCAATATCCTGAGTTaGAATTTTTGCAGGCAAGCATACAGTATTCCCCAGCATCGCAAC | + |
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Preference number: 1 (lower is better) Translates to: QSNYFIQNKAINILS*NFCRQAYSIPQHRN Trigger: GTTGCGATGCTGGGGAATACTGTATGCTTGCCTGCAAAAATTTCAACTCAGGATATTGATTGCTTTGTTCTGTATGAAGTAATTGCTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR TCA 90 bp | CTGCTAACATGGGACTCCACATACATACCACTACAAGTTCCCTGTTaGACTAGGAACAACAATAACAACAAAGCAATTACTTCATACAGA | + |
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Preference number: 1 (lower is better) Translates to: LLTWDSTYIPLQVPC*TRNNNNNKAITSYR Trigger: TCTGTATGAAGTAATTGCTTTGTTGTTATTGTTGTTCCTAGTTCAACAGGGAACTTGTAGTGGTATGTATGTGGAGTCCCATGTTAGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR-3UTR GCA 90 bp | TCCCTGCGTCCTGCTGCCCAGAGTCCTTGTGCCCATCGTATTTCAGAGAGGTGGTACCAGAGGGATGGATaGGCATTTCTCAAGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SLRPAAQSPCAHRISERWYQRDG*AFLKGK Trigger: CTTTCCCTTGAGAAATGCGCATCCATCCCTCTGGTA...CCACCTCTCTGAAATACGATGGGCACAAGGACTCTGGGCAGCAGGACGCAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR-3UTR TCA 90 bp | TGGATCAATGCTCTTTTCTGGCTTCTGTGGGCACCAAGTACACACATAGTGCACCTTTCTCTTTCCCACTaGGGCCAGTTTGGGTTTATC | + |
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Preference number: 2 (lower is better) Translates to: WINALFWLLWAPSTHIVHLSLSH*GQFGFI Trigger: GATAAACCCAAACTGGCCTCAGTGGGAAAGAGAAAG...GTGCACTATGTGTGTACTTGGTGCCCACAGAAGCCAGAAAAGAGCATTGATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR-3UTR CCA 90 bp | TGGATCAATGCTCTTTTCTGGCTTCTGTGGGCACCAAGTACACACATAGTGCACTTGGGCCTGCTAACATaGGACTCCACATACATACCA | + |
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Preference number: 2 (lower is better) Translates to: WINALFWLLWAPSTHIVHLGLLT*DSTYIP Trigger: TGGTATGTATGTGGAGTCCCATGTTAGCAGGCCCAA...GTGCACTATGTGTGTACTTGGTGCCCACAGAAGCCAGAAAAGAGCATTGATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR-3UTR TCA 90 bp | TGGATCAATGCTCTTTTCTGGCTTCTGTGGGCACCAAGTACACACATAGTGCACAAGCAATCAATATCCTaGGTTGAAATTTTTGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: WINALFWLLWAPSTHIVHKQSIS*VEIFAG Trigger: GCCTGCAAAAATTTCAACTCAGGATATTGATTGCTT...GTGCACTATGTGTGTACTTGGTGCCCACAGAAGCCAGAAAAGAGCATTGATCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR-3UTR GCA 90 bp | TGGATCAATGCTCTTTTCTGGCTTCTGTGGGCACCAAGTACACACATAGTGCACGATGATGACAGTGTTTaGTTCTGTGTTCAGATTAAT | + |
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Preference number: 2 (lower is better) Translates to: WINALFWLLWAPSTHIVHDDDSV*FCVQIN Trigger: ATTAATCTGAACACAGAAGCAAACACTGTCATCATC...GTGCACTATGTGTGTACTTGGTGCCCACAGAAGCCAGAAAAGAGCATTGATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR-3UTR GCA 90 bp | TTCTGGCTTCTGTGGGCACCAAGTACACACATAGTGCACAGGCATACATTCAGAATTGTCAGTTGCAAATaGCAAAGGAGTTTGTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: FWLLWAPSTHIVHRHTFRIVSCK*QRSLFC Trigger: ACAAAACAAACTCCTTTGGCATTTGCAACTGACAAT...TCTGAATGTATGCCTGTGCACTATGTGTGTACTTGGTGCCCACAGAAGCCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR CCA 72 bp | TGCCCATGGCCGTGGAGCAGGTTGGGCCTGCTAACATaGGACTCCACATACATACCACTACAAGTTCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: CPWPWSRLGLLT*DSTYIPLQVPC Trigger: ACAGGGAACTTGTAGTGGTATGTATGTGGAGTCCCATGTTAGCAGGCCCAACCTGCTCCACGGCCATGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR CCA 72 bp | GCCCAGAGTCCTTGTGCCCATCGTATTTCAGAGAGGTaGGCTAGAGCCTCCTTTCCAAGTCCATATTCACCC | + |
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Preference number: 3 (lower is better) Translates to: AQSPCAHRISER*ARASFPSPYSP Trigger: GGGTGAATATGGACTTGGAAAGGAGGCTCTAGCCCACCTCTCTGAAATACGATGGGCACAAGGACTCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR-3UTR CAA 90 bp | AATATTCACTTCCCATCCCAGTTTATCCCAAGTCTTTCTCACTCACCCAACTTCTGGCCGTGGAGCAGGTaGGGCCTGCTAACATGGGAC | + |
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Preference number: 3 (lower is better) Translates to: NIHFPSQFIPSLSHSPNFWPWSR*GLLTWD Trigger: GTCCCATGTTAGCAGGCCCAACCTGCTCCACGGCCA...GAAGTTGGGTGAGTGAGAAAGACTTGGGATAAACTGGGATGGGAAGTGAATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR TCA 72 bp | TCCCTCTTCCAGCCTCAATCAAACACCAATAACTCCTaGGCTAGGATTGGAGTTTCATGCCCACCCGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: SLFQPQSNTNNS*ARIGVSCPPAF Trigger: GAAGGCGGGTGGGCATGAAACTCCAATCCTAGCTCAGGAGTTATTGGTGTTTGATTGAGGCTGGAAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR GCA 72 bp | TACATAGCCAAAGTAAATCTCATCCCTGCGTCCTGCTaGCCAGAGTCCTTGTGCCCATCGTATTTCAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: YIAKVNLIPASC*PESLCPSYFRE Trigger: CTCTCTGAAATACGATGGGCACAAGGACTCTGGGCAGCAGGACGCAGGGATGAGATTTACTTTGGCTATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR CCA 72 bp | TCTGAGACTCCAATCCCATGGATCAATGCTCTTTTCTaGCTTCTGTGGGCACCAAGTACACACATAGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: SETPIPWINALF*LLWAPSTHIVH Trigger: GTGCACTATGTGTGTACTTGGTGCCCACAGAAGCCAGAAAAGAGCATTGATCCATGGGATTGGAGTCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR CCA 72 bp | GCAGCCAGTACTTTACGATTATGTCCTTATGACAATTaGATTCTAAAGACGGATTCAAAGGCAGAGAACACA | + |
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Preference number: 3 (lower is better) Translates to: AASTLRLCPYDN*ILKTDSKAENT Trigger: TGTGTTCTCTGCCTTTGAATCCGTCTTTAGAATCCAATTGTCATAAGGACATAATCGTAAAGTACTGGCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR-3UTR CAA 90 bp | CAGAGGGATGGATGCGCATTTCTCAAGGGAAAGCAATGTATACTTATTTTAATGCCTGAGTTGAAATTTTaGCAGGCAAGCATACAGTAT | + |
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Preference number: 3 (lower is better) Translates to: QRDGCAFLKGKQCILILMPELKF*QASIQY Trigger: ATACTGTATGCTTGCCTGCAAAAATTTCAACTCAGG...CATTAAAATAAGTATACATTGCTTTCCCTTGAGAAATGCGCATCCATCCCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR GCA 72 bp | CTTAGCAAACGTAACTCTTTATACCAGAGGGATGGATaGGCATTTCTCAAGGGAAAGCAATGTATACTTATT | + |
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Preference number: 3 (lower is better) Translates to: LSKRNSLYQRDG*AFLKGKQCILI Trigger: AATAAGTATACATTGCTTTCCCTTGAGAAATGCGCATCCATCCCTCTGGTATAAAGAGTTACGTTTGCTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR TCA 72 bp | TACTTCATACAGAACAAAGCAATCAATATCCTGAGTTaGAATTTTTGCAGGCAAGCATACAGTATTCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: YFIQNKAINILS*NFCRQAYSIPQ Trigger: CTGGGGAATACTGTATGCTTGCCTGCAAAAATTTCAACTCAGGATATTGATTGCTTTGTTCTGTATGAAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR TCA 72 bp | GCAATTACTTCATACAGAACAAAGCAATCAATATCCTaGGTTGAAATTTTTGCAGGCAAGCATACAGTATTC | + |
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Preference number: 3 (lower is better) Translates to: AITSYRTKQSIS*VEIFAGKHTVF Trigger: GAATACTGTATGCTTGCCTGCAAAAATTTCAACTCAGGATATTGATTGCTTTGTTCTGTATGAAGTAATTGC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR GCA 90 bp | AGCATCGCAACCGGCTGGAGCCATGACGTCACAGCCTGGAAGGCAGCTTCCTCTGGTCCGTTTCTCATCTaGTCCACCTCACAGAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: SIATGWSHDVTAWKAASSGPFLI*STSQKC Trigger: GCACTTCTGTGAGGTGGAGCAGATGAGAAACGGACC...AGAGGAAGCTGCCTTCCAGGCTGTGACGTCATGGCTCCAGCCGGTTGCGATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR GCA 90 bp | TCCCTGCGTCCTGCTGCCCAGAGTCCTTGTGCCCATCGTATTTCAGAGAGGTGGAGCTTCGCCAGGACGTaGACAGTGTTCTTGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLRPAAQSPCAHRISERWSFART*TVFLMV Trigger: CACCATCAAGAACACTGTGCACGTCCTGGCGAAGCT...CCACCTCTCTGAAATACGATGGGCACAAGGACTCTGGGCAGCAGGACGCAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR GCA 90 bp | TATTCCCCAGCATCGCAACCGGCTGGAGCCATGACGTCACAGCCTGGAAGGCAGTCTGGTAGCGCCACTTaGAGTACACTTGAGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: YSPASQPAGAMTSQPGRQSGSAT*STLEWQ Trigger: TTGCCACTCAAGTGTACTGCAAGTGGCGCTACCAGA...CTGCCTTCCAGGCTGTGACGTCATGGCTCCAGCCGGTTGCGATGCTGGGGAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR GCA 90 bp | GGAGCCATGACGTCACAGCCTGGAAGGCAGCTTCCTCTTGACTGTCCCTGTTATCGGGGTGTGGATGAATaGATGGACGTGTTTGATCCC | + |
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Preference number: 4 (lower is better) Translates to: GAMTSQPGRQLPLDCPCYRGVDE*MDVFDP Trigger: GGGATCAAACACGTCCATGCATTCATCCACACCCCG...ATAACAGGGACAGTCAAGAGGAAGCTGCCTTCCAGGCTGTGACGTCATGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR GCA 90 bp | GTCCTGCTGCCCAGAGTCCTTGTGCCCATCGTATTTCAGAGAGGTGGGCTAGAGTCTGGTAGCGCCACTTaGAGTACACTTGAGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: VLLPRVLVPIVFQRGGLESGSAT*STLEWQ Trigger: TTGCCACTCAAGTGTACTGCAAGTGGCGCTACCAGA...CTCTAGCCCACCTCTCTGAAATACGATGGGCACAAGGACTCTGGGCAGCAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR CCA 90 bp | TATTCCCCAGCATCGCAACCGGCTGGAGCCATGACGTCACAGCCTGGAAGGCAGCCTTCAAACCCAGACTaGGTTGTTTTCAAGACCTTG | + |
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Preference number: 4 (lower is better) Translates to: YSPASQPAGAMTSQPGRQPSNPD*VVFKTL Trigger: CAAGGTCTTGAAAACAACCCAGTCTGGGTTTGAAGG...CTGCCTTCCAGGCTGTGACGTCATGGCTCCAGCCGGTTGCGATGCTGGGGAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR CCA 90 bp | GTCCTGCTGCCCAGAGTCCTTGTGCCCATCGTATTTCAGAGAGGTGGGCTAGAGTCTATCTCAGGAAGCTaGCTCAGGGACAGCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: VLLPRVLVPIVFQRGGLESISGS*LRDSTC Trigger: ACAAGTGCTGTCCCTGAGCCAGCTTCCTGAGATAGA...CTCTAGCCCACCTCTCTGAAATACGATGGGCACAAGGACTCTGGGCAGCAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR TCA 90 bp | AGCATCGCAACCGGCTGGAGCCATGACGTCACAGCCTGGAAGGCAGCTTCCTCTAGGTCTCGATGTTTCTaGTCTTTCCGTAGTTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SIATGWSHDVTAWKAASSRSRCF*SFRSCH Trigger: ATGACAACTACGGAAAGATCAGAAACATCGAGACCT...AGAGGAAGCTGCCTTCCAGGCTGTGACGTCATGGCTCCAGCCGGTTGCGATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR CCA 90 bp | TGCGTCCTGCTGCCCAGAGTCCTTGTGCCCATCGTATTTCAGAGAGGTGGGCTATGGGCTCGAGTGACATaGTTAAAAGAAGAGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: CVLLPRVLVPIVFQRGGLWARVT*LKEERK Trigger: CTTCCTCTCTTCTTTTAACCATGTCACTCGAGCCCA...TAGCCCACCTCTCTGAAATACGATGGGCACAAGGACTCTGGGCAGCAGGACGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR CCA 90 bp | CAGCTTCCTCTTGACTGTCCCTGTTATTTTGCCGTAGGGATTGTCGAGAGGCAGGGGAGGGTAGTGAACTaGTCCTTGAGGAACCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: QLPLDCPCYFAVGIVERQGRVVN*SLRNPS Trigger: TGAAGGGTTCCTCAAGGACCAGTTCACTACCCTCCC...CTGCCTCTCGACAATCCCTACGGCAAAATAACAGGGACAGTCAAGAGGAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR CCA 90 bp | AGGCAGCTTCCTCTTGACTGTCCCTGTTATTTTGCCGTAGGGATTGTCGAGAGGGTCTTCTCAGGAAGCTaGCTCAGGGACAGCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: RQLPLDCPCYFAVGIVERVFSGS*LRDSTC Trigger: ACAAGTGCTGTCCCTGAGCCAGCTTCCTGAGAAGAC...CCTCTCGACAATCCCTACGGCAAAATAACAGGGACAGTCAAGAGGAAGCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR TCA 90 bp | GTCCTGCTGCCCAGAGTCCTTGTGCCCATCGTATTTCAGAGAGGTGGGCTAGAGGAATATGGAGAACTTTaGCCATGTCTTTCCCATAGC | + |
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Preference number: 4 (lower is better) Translates to: VLLPRVLVPIVFQRGGLEEYGEL*PCLSHS Trigger: GCTATGGGAAAGACATGGTCAAAGTTCTCCATATTC...CTCTAGCCCACCTCTCTGAAATACGATGGGCACAAGGACTCTGGGCAGCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR TCA 90 bp | CAGCTTCCTCTTGACTGTCCCTGTTATTTTGCCGTAGGGATTGTCGAGAGGCAGTCTTTGATTCCAGAGTaGATGACGGGAGGTCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: QLPLDCPCYFAVGIVERQSLIPE*MTGGPF Trigger: AAACGGACCTCCCGTCATTCACTCTGGAATCAAAGA...CTGCCTCTCGACAATCCCTACGGCAAAATAACAGGGACAGTCAAGAGGAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR GCA 90 bp | TGGATCAATGCTCTTTTCTGGCTTCTGTGGGCACCAAGTACACACATAGTGCACCGGGGTGTGGATGAATaGATGGACGTGTTTGATCCC | + |
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Preference number: 4 (lower is better) Translates to: WINALFWLLWAPSTHIVHRGVDE*MDVFDP Trigger: GGGATCAAACACGTCCATGCATTCATCCACACCCCG...GTGCACTATGTGTGTACTTGGTGCCCACAGAAGCCAGAAAAGAGCATTGATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR GCA 90 bp | TGGCTTCTGTGGGCACCAAGTACACACATAGTGCACAGGCATACATTCAGACAAGGTCCGTTTCTCATCTaGTCCACCTCACAGAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: WLLWAPSTHIVHRHTFRQGPFLI*STSQKC Trigger: GCACTTCTGTGAGGTGGAGCAGATGAGAAACGGACC...TTGTCTGAATGTATGCCTGTGCACTATGTGTGTACTTGGTGCCCACAGAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR CCA 90 bp | ATGACGTCACAGCCTGGAAGGCAGCTTCCTCTTGACTGTCCCTGTTATTTTGCCTGCAGTACACTTGAGTaGCAAAGCATCGGTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: MTSQPGRQLPLDCPCYFACSTLE*QSIGPS Trigger: TGAAGGACCGATGCTTTGCCACTCAAGTGTACTGCA...GGCAAAATAACAGGGACAGTCAAGAGGAAGCTGCCTTCCAGGCTGTGACGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR TCA 90 bp | TGCGTCCTGCTGCCCAGAGTCCTTGTGCCCATCGTATTTCAGAGAGGTGGGCTATATTTTCCATCTCTCTaGATATGGAGAACTTTGACC | + |
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Preference number: 4 (lower is better) Translates to: CVLLPRVLVPIVFQRGGLYFPSL*IWRTLT Trigger: GGTCAAAGTTCTCCATATTCAGAGAGATGGAAAATA...TAGCCCACCTCTCTGAAATACGATGGGCACAAGGACTCTGGGCAGCAGGACGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR TCA 90 bp | ATGACGTCACAGCCTGGAAGGCAGCTTCCTCTTGACTGTCCCTGTTATTTTGCCCTTCTGCACGGAAGGTaGGTATTCACCTTTGTCATA | + |
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Preference number: 4 (lower is better) Translates to: MTSQPGRQLPLDCPCYFALLHGR*VFTFVI Trigger: TATGACAAAGGTGAATACTCACCTTCCGTGCAGAAG...GGCAAAATAACAGGGACAGTCAAGAGGAAGCTGCCTTCCAGGCTGTGACGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR TCA 90 bp | CTTCCTCTTGACTGTCCCTGTTATTTTGCCGTAGGGATTGTCGAGAGGCAGCAAGAATGTTCGGAAGGCTaGTTTCCATGTCTTCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: LPLDCPCYFAVGIVERQQECSEG*FPCLLR Trigger: CCTGAGAAGACATGGAAATCAGCCTTCCGAACATTC...TTGCTGCCTCTCGACAATCCCTACGGCAAAATAACAGGGACAGTCAAGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR CCA 90 bp | ATGACGTCACAGCCTGGAAGGCAGCTTCCTCTTGACTGTCCCTGTTATTTTGCCTGGGCTCGAGTGACATaGTTAAAAGAAGAGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: MTSQPGRQLPLDCPCYFAWARVT*LKEERK Trigger: CTTCCTCTCTTCTTTTAACCATGTCACTCGAGCCCA...GGCAAAATAACAGGGACAGTCAAGAGGAAGCTGCCTTCCAGGCTGTGACGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR CCA 90 bp | CTTCCTCTTGACTGTCCCTGTTATTTTGCCGTAGGGATTGTCGAGAGGCAGCAAGTGTGGATGAATGCATaGACGTGTTTGATCCCATTC | + |
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Preference number: 4 (lower is better) Translates to: LPLDCPCYFAVGIVERQQVWMNA*TCLIPF Trigger: GAATGGGATCAAACACGTCCATGCATTCATCCACAC...TTGCTGCCTCTCGACAATCCCTACGGCAAAATAACAGGGACAGTCAAGAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR CCA 90 bp | CAATATCCTGAGTTGAAATTTTTGCAGGCAAGCATACAGTATTCCCCAGCATCGGTTCCCGTCGGGGTGTaGATGAATGCATGGACGTGT | + |
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Preference number: 4 (lower is better) Translates to: QYPELKFLQASIQYSPASVPVGV*MNAWTC Trigger: ACACGTCCATGCATTCATCCACACCCCGACGGGAAC...CGATGCTGGGGAATACTGTATGCTTGCCTGCAAAAATTTCAACTCAGGATATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR TCA 90 bp | TTCTGGCTTCTGTGGGCACCAAGTACACACATAGTGCACAGGCATACATTCAGACTTCTGCACGGAAGGTaGGTATTCACCTTTGTCATA | + |
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Preference number: 4 (lower is better) Translates to: FWLLWAPSTHIVHRHTFRLLHGR*VFTFVI Trigger: TATGACAAAGGTGAATACTCACCTTCCGTGCAGAAG...TCTGAATGTATGCCTGTGCACTATGTGTGTACTTGGTGCCCACAGAAGCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR CCA 90 bp | CAATCCCATGGATCAATGCTCTTTTCTGGCTTCTGTGGGCACCAAGTACACACAGTGTGGATGAATGCATaGACGTGTTTGATCCCATTC | + |
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Preference number: 4 (lower is better) Translates to: QSHGSMLFSGFCGHQVHTVWMNA*TCLIPF Trigger: GAATGGGATCAAACACGTCCATGCATTCATCCACAC...TGTGTGTACTTGGTGCCCACAGAAGCCAGAAAAGAGCATTGATCCATGGGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR CCA 90 bp | CAATATCCTGAGTTGAAATTTTTGCAGGCAAGCATACAGTATTCCCCAGCATCGGGGAGGGTAGTGAACTaGTCCTTGAGGAACCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: QYPELKFLQASIQYSPASGRVVN*SLRNPS Trigger: TGAAGGGTTCCTCAAGGACCAGTTCACTACCCTCCC...CGATGCTGGGGAATACTGTATGCTTGCCTGCAAAAATTTCAACTCAGGATATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR TCA 90 bp | CACTTAGCAAACGTAACTCTTTATACCAGAGGGATGGATGCGCATTTCTCAAGGTCTTTGATTCCAGAGTaGATGACGGGAGGTCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: HLANVTLYTRGMDAHFSRSLIPE*MTGGPF Trigger: AAACGGACCTCCCGTCATTCACTCTGGAATCAAAGA...CCTTGAGAAATGCGCATCCATCCCTCTGGTATAAAGAGTTACGTTTGCTAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR TCA 90 bp | CACTTAGCAAACGTAACTCTTTATACCAGAGGGATGGATGCGCATTTCTCAAGGAAGGCAGCTTCCTCTTaGCTGTCCCTGTTATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLANVTLYTRGMDAHFSRKAASS*LSLLFC Trigger: GCAAAATAACAGGGACAGTCAAGAGGAAGCTGCCTT...CCTTGAGAAATGCGCATCCATCCCTCTGGTATAAAGAGTTACGTTTGCTAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR CCA 90 bp | CACTTAGCAAACGTAACTCTTTATACCAGAGGGATGGATGCGCATTTCTCAAGGTGCAGTACACTTGAGTaGCAAAGCATCGGTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: HLANVTLYTRGMDAHFSRCSTLE*QSIGPS Trigger: TGAAGGACCGATGCTTTGCCACTCAAGTGTACTGCA...CCTTGAGAAATGCGCATCCATCCCTCTGGTATAAAGAGTTACGTTTGCTAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR TCA 90 bp | AAAGAGCATTTCAAAGCACAGAAAAGTTACTGGGTTGTTCATATGCACAGGTCTCACTTGCAGTACACTTaGGTGGCAAAGCATCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KEHFKAQKSYWVVHMHRSHLQYT*VAKHRS Trigger: GGACCGATGCTTTGCCACTCAAGTGTACTGCAAGTG...AGACCTGTGCATATGAACAACCCAGTAACTTTTCTGTGCTTTGAAATGCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR CCA 90 bp | AAAGAGCATTTCAAAGCACAGAAAAGTTACTGGGTTGTTCATATGCACAGGTCTCCTTCAAACCCAGACTaGGTTGTTTTCAAGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KEHFKAQKSYWVVHMHRSPSNPD*VVFKTL Trigger: CAAGGTCTTGAAAACAACCCAGTCTGGGTTTGAAGG...AGACCTGTGCATATGAACAACCCAGTAACTTTTCTGTGCTTTGAAATGCTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR CAA 72 bp | ACAGAACAAAGCAATCAATATCCTGAGTTGAAATTTTaGCAGGCAAGCATACAGTATTCCCCAGCATCGCAA | + |
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Preference number: 4 (lower is better) Translates to: TEQSNQYPELKF*QASIQYSPASQ Trigger: TTGCGATGCTGGGGAATACTGTATGCTTGCCTGCAAAAATTTCAACTCAGGATATTGATTGCTTTGTTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| 3UTR CAA 72 bp | TTACTTCATACAGAACAAAGCAATCAATATCCTGAGTaGAAATTTTTGCAGGCAAGCATACAGTATTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LLHTEQSNQYPE*KFLQASIQYSP Trigger: TGGGGAATACTGTATGCTTGCCTGCAAAAATTTCAACTCAGGATATTGATTGCTTTGTTCTGTATGAAGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR CAA 90 bp | TATTCCCCAGCATCGCAACCGGCTGGAGCCATGACGTCACAGCCTGGAAGGCAGGCTCACAGATGTTCATaGCAAAGGTCTCGATGTTTC | + |
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Preference number: 5 (lower is better) Translates to: YSPASQPAGAMTSQPGRQAHRCS*QRSRCF Trigger: GAAACATCGAGACCTTTGCAATGAACATCTGTGAGC...CTGCCTTCCAGGCTGTGACGTCATGGCTCCAGCCGGTTGCGATGCTGGGGAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS GCA 90 bp | CTGCTCCACCTCACAGAAGTGCGTTCCCGTCGGGGTGTGGATGAATaGATGGACGTGTTTGATCCCATTCTTTTCAAATCGTTTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LLHLTEVRSRRGVDE*MDVFDPILFKSFPG Trigger: CCCTGGAAACGATTTGAAAAGAATGGGATCAAACACGTCCATGCATTCATCCACACCCCGACGGGAACGCACTTCTGTGAGGTGGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000121133.2 ENSMUST00000199489.5 |
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| CDS-3UTR CAA 90 bp | AGGCAGCTTCCTCTTGACTGTCCCTGTTATTTTGCCGTAGGGATTGTCGAGAGGCCACTTGCAGTACACTaGAGTGGCAAAGCATCGGTC | + |
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Preference number: 5 (lower is better) Translates to: RQLPLDCPCYFAVGIVERPLAVH*SGKASV Trigger: GACCGATGCTTTGCCACTCAAGTGTACTGCAAGTGG...CCTCTCGACAATCCCTACGGCAAAATAACAGGGACAGTCAAGAGGAAGCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR CAA 90 bp | TCCCTGCGTCCTGCTGCCCAGAGTCCTTGTGCCCATCGTATTTCAGAGAGGTGGAGCAAAACCTCTTCCTaGTTGATCAGTCCCATTTTG | + |
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Preference number: 5 (lower is better) Translates to: SLRPAAQSPCAHRISERWSKTSS*LISPIL Trigger: CAAAATGGGACTGATCAACAAGGAAGAGGTTTTGCT...CCACCTCTCTGAAATACGATGGGCACAAGGACTCTGGGCAGCAGGACGCAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR CAA 90 bp | GCCATGACGTCACAGCCTGGAAGGCAGCTTCCTCTTGACTGTCCCTGTTATTTTGTAGTGAACTGGTCCTaGAGGAACCCTTCAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: AMTSQPGRQLPLDCPCYFVVNWS*RNPSNP Trigger: TGGGTTTGAAGGGTTCCTCAAGGACCAGTTCACTAC...AAAATAACAGGGACAGTCAAGAGGAAGCTGCCTTCCAGGCTGTGACGTCATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS TCA 90 bp | CCAGACTGGGTTGTTTTCAAGACCTTGAGGTCTTTGATTCCAGAGTaGATGACGGGAGGTCCGTTTCTCATCTGCTCCACCTCACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PDWVVFKTLRSLIPE*MTGGPFLICSTSQK Trigger: CTTCTGTGAGGTGGAGCAGATGAGAAACGGACCTCCCGTCATTCACTCTGGAATCAAAGACCTCAAGGTCTTGAAAACAACCCAGTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000121133.2 ENSMUST00000199489.5 |
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| CDS GCA 90 bp | GCAAAGGTCTCGATGTTTCTGATCCCTCTGAGCTTCGCCAGGACGTaGACAGTGTTCTTGATGGTGTCTGTAGGGATGATGTCGGAATTA | + |
|
Preference number: 5 (lower is better) Translates to: AKVSMFLIPLSFART*TVFLMVSVGMMSEL Trigger: TAATTCCGACATCATCCCTACAGACACCATCAAGAACACTGTGCACGTCCTGGCGAAGCTCAGAGGGATCAGAAACATCGAGACCTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000147409.2 ENSMUST00000199489.5 |
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| CDS CCA 90 bp | TTTCTCATCTGCTCCACCTCACAGAAGTGCGTTCCCGTCGGGGTGTaGATGAATGCATGGACGTGTTTGATCCCATTCTTTTCAAATCGT | + |
|
Preference number: 5 (lower is better) Translates to: FLICSTSQKCVPVGV*MNAWTCLIPFFSNR Trigger: ACGATTTGAAAAGAATGGGATCAAACACGTCCATGCATTCATCCACACCCCGACGGGAACGCACTTCTGTGAGGTGGAGCAGATGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000121133.2 ENSMUST00000199489.5 |
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| CDS-3UTR CAA 90 bp | CAATCCCATGGATCAATGCTCTTTTCTGGCTTCTGTGGGCACCAAGTACACACAGTAGTGAACTGGTCCTaGAGGAACCCTTCAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: QSHGSMLFSGFCGHQVHTVVNWS*RNPSNP Trigger: TGGGTTTGAAGGGTTCCTCAAGGACCAGTTCACTAC...TGTGTGTACTTGGTGCCCACAGAAGCCAGAAAAGAGCATTGATCCATGGGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR CAA 90 bp | AGGCAGCTTCCTCTTGACTGTCCCTGTTATTTTGCCGTAGGGATTGTCGAGAGGGTTGTTTTCAAGACCTaGAGGTCTTTGATTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RQLPLDCPCYFAVGIVERVVFKT*RSLIPE Trigger: CTCTGGAATCAAAGACCTCAAGGTCTTGAAAACAAC...CCTCTCGACAATCCCTACGGCAAAATAACAGGGACAGTCAAGAGGAAGCTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR CAA 90 bp | CACTTAGCAAACGTAACTCTTTATACCAGAGGGATGGATGCGCATTTCTCAAGGCCACTTGCAGTACACTaGAGTGGCAAAGCATCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HLANVTLYTRGMDAHFSRPLAVH*SGKASV Trigger: GACCGATGCTTTGCCACTCAAGTGTACTGCAAGTGG...CCTTGAGAAATGCGCATCCATCCCTCTGGTATAAAGAGTTACGTTTGCTAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS GCA 90 bp | AGTGACATGGTTAAAAGAAGAGAGGAAGTGCTCACAGATGTTCATTaGAAAGGTCTCGATGTTTCTGATCCCTCTGAGCTTCGCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SDMVKRREEVLTDVH*KGLDVSDPSELRQD Trigger: GTCCTGGCGAAGCTCAGAGGGATCAGAAACATCGAGACCTTTGCAATGAACATCTGTGAGCACTTCCTCTCTTCTTTTAACCATGTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029837.14 ENSMUST00000199489.5 |
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| CDS-3UTR CAA 90 bp | CACTTAGCAAACGTAACTCTTTATACCAGAGGGATGGATGCGCATTTCTCAAGGACGTGCACAGTGTTCTaGATGGTGTCTGTAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: HLANVTLYTRGMDAHFSRTCTVF*MVSVGM Trigger: CATCCCTACAGACACCATCAAGAACACTGTGCACGT...CCTTGAGAAATGCGCATCCATCCCTCTGGTATAAAGAGTTACGTTTGCTAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR CAA 90 bp | TGGATCAATGCTCTTTTCTGGCTTCTGTGGGCACCAAGTACACACATAGTGCACGCTCACAGATGTTCATaGCAAAGGTCTCGATGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WINALFWLLWAPSTHIVHAHRCS*QRSRCF Trigger: GAAACATCGAGACCTTTGCAATGAACATCTGTGAGC...GTGCACTATGTGTGTACTTGGTGCCCACAGAAGCCAGAAAAGAGCATTGATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR CAA 90 bp | CAATATCCTGAGTTGAAATTTTTGCAGGCAAGCATACAGTATTCCCCAGCATCGGTTGTTTTCAAGACCTaGAGGTCTTTGATTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QYPELKFLQASIQYSPASVVFKT*RSLIPE Trigger: CTCTGGAATCAAAGACCTCAAGGTCTTGAAAACAAC...CGATGCTGGGGAATACTGTATGCTTGCCTGCAAAAATTTCAACTCAGGATATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR CAA 90 bp | CAATATCCTGAGTTGAAATTTTTGCAGGCAAGCATACAGTATTCCCCAGCATCGAAAACCTCTTCCTTGTaGATCAGTCCCATTTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QYPELKFLQASIQYSPASKTSSL*ISPILD Trigger: GTCCAAAATGGGACTGATCAACAAGGAAGAGGTTTT...CGATGCTGGGGAATACTGTATGCTTGCCTGCAAAAATTTCAACTCAGGATATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS GCA 90 bp | AGTGACATGGTTAAAAGAAGAGAGGAAGTGCTCACAGATGTTCATTaGAAAGGTCTCGATGTTTCTGATCTTTCCGTAGTTGTCATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SDMVKRREEVLTDVH*KGLDVSDLSVVVMV Trigger: TACCATGACAACTACGGAAAGATCAGAAACATCGAGACCTTTGCAATGAACATCTGTGAGCACTTCCTCTCTTCTTTTAACCATGTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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| CDS-3UTR CAA 90 bp | AAAGAGCATTTCAAAGCACAGAAAAGTTACTGGGTTGTTCATATGCACAGGTCTGAAGTTGCCACCTCTTaGATGCTGTGGTATTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KEHFKAQKSYWVVHMHRSEVATS*MLWYFP Trigger: TGGAAAATACCACAGCATCAAAGAGGTGGCAACTTC...AGACCTGTGCATATGAACAACCCAGTAACTTTTCTGTGCTTTGAAATGCTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS-3UTR CAA 90 bp | TGCACAGGCATACATTCAGACAAAACATTCATGCACATGATAAAATCAGTATGTAATGCATGGACGTGTTaGATCCCATTCTTTTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: CTGIHSDKTFMHMIKSVCNAWTC*IPFFSN Trigger: ATTTGAAAAGAATGGGATCAAACACGTCCATGCATT...ACATACTGATTTTATCATGTGCATGAATGTTTTGTCTGAATGTATGCCTGTGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029837.14 |
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| CDS CAA 72 bp | CACGTCCCGTCTCTGGTAGCGCCACTTGCAGTACACTaGAGTGGCAAAGCATCGGTCCTTCACCTCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HVPSLVAPLAVH*SGKASVLHLRE Trigger: CTCCCTGAGGTGAAGGACCGATGCTTTGCCACTCAAGTGTACTGCAAGTGGCGCTACCAGAGACGGGACGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000121133.2 ENSMUST00000199489.5 |
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| CDS CAA 90 bp | CTCGAAGTCCACGTCCCGTCTCTGGTAGCGCCACTTGCAGTACACTaGAGTGGCAAAGCATCGGTCCTTCACCTCAGGGAGGGTAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LEVHVPSLVAPLAVH*SGKASVLHLREGSE Trigger: TTCACTACCCTCCCTGAGGTGAAGGACCGATGCTTTGCCACTCAAGTGTACTGCAAGTGGCGCTACCAGAGACGGGACGTGGACTTCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000121133.2 ENSMUST00000199489.5 |
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| CDS GCA 72 bp | CCTCGAAGTCCACGTCCCGTCTCTGGTAGCGCCACTTaGAGTACACTTGAGTGGCAAAGCATCGGTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PRSPRPVSGSAT*STLEWQSIGPS Trigger: TGAAGGACCGATGCTTTGCCACTCAAGTGTACTGCAAGTGGCGCTACCAGAGACGGGACGTGGACTTCGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000121133.2 ENSMUST00000199489.5 |
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| CDS CCA 72 bp | AAGCATCGGTCCTTCACCTCAGGGAGGGTAGTGAACTaGTCCTTGAGGAACCCTTCAAACCCAGACTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: KHRSFTSGRVVN*SLRNPSNPDWV Trigger: AACCCAGTCTGGGTTTGAAGGGTTCCTCAAGGACCAGTTCACTACCCTCCCTGAGGTGAAGGACCGATGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000121133.2 ENSMUST00000199489.5 |
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| CDS CAA 72 bp | CGGTCCTTCACCTCAGGGAGGGTAGTGAACTGGTCCTaGAGGAACCCTTCAAACCCAGACTGGGTTGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSFTSGRVVNWS*RNPSNPDWVVF Trigger: GAAAACAACCCAGTCTGGGTTTGAAGGGTTCCTCAAGGACCAGTTCACTACCCTCCCTGAGGTGAAGGACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000121133.2 ENSMUST00000199489.5 |
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| CDS CCA 72 bp | TGCTCCACCTCACAGAAGTGCGTTCCCGTCGGGGTGTaGATGAATGCATGGACGTGTTTGATCCCATTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: CSTSQKCVPVGV*MNAWTCLIPFF Trigger: AAAGAATGGGATCAAACACGTCCATGCATTCATCCACACCCCGACGGGAACGCACTTCTGTGAGGTGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000121133.2 ENSMUST00000199489.5 |
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| CDS CAA 90 bp | GCAAAGCATCGGTCCTTCACCTCAGGGAGGGTAGTGAACTGGTCCTaGAGGAACCCTTCAAACCCAGACTGGGTTGTTTTCAAGACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: AKHRSFTSGRVVNWS*RNPSNPDWVVFKTL Trigger: CAAGGTCTTGAAAACAACCCAGTCTGGGTTTGAAGGGTTCCTCAAGGACCAGTTCACTACCCTCCCTGAGGTGAAGGACCGATGCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000121133.2 ENSMUST00000199489.5 |
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| CDS CAA 90 bp | ATGTTTCTGATCCCTCTGAGCTTCGCCAGGACGTGCACAGTGTTCTaGATGGTGTCTGTAGGGATGATGTCGGAATTATCACCGTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: MFLIPLSFARTCTVF*MVSVGMMSELSPCR Trigger: CCTACACGGTGATAATTCCGACATCATCCCTACAGACACCATCAAGAACACTGTGCACGTCCTGGCGAAGCTCAGAGGGATCAGAAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000147409.2 ENSMUST00000199489.5 |
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| CDS GCA 72 bp | CTCACAGAAGTGCGTTCCCGTCGGGGTGTGGATGAATaGATGGACGTGTTTGATCCCATTCTTTTCAAATCG | + |
|
Preference number: 6 (lower is better) Translates to: LTEVRSRRGVDE*MDVFDPILFKS Trigger: CGATTTGAAAAGAATGGGATCAAACACGTCCATGCATTCATCCACACCCCGACGGGAACGCACTTCTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000121133.2 ENSMUST00000199489.5 |
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| CDS CCA 72 bp | CAGAAGTGCGTTCCCGTCGGGGTGTGGATGAATGCATaGACGTGTTTGATCCCATTCTTTTCAAATCGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: QKCVPVGVWMNA*TCLIPFFSNRF Trigger: GAAACGATTTGAAAAGAATGGGATCAAACACGTCCATGCATTCATCCACACCCCGACGGGAACGCACTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000121133.2 ENSMUST00000199489.5 |
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| CDS GCA 72 bp | ATCCTTCTTGGACCTCAGAGTCAACTGGACCGAAGTTaGCACCTCTTTGATGCTGTGGTATTTTCCATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ILLGPQSQLDRS*HLFDAVVFSIS Trigger: AGAGATGGAAAATACCACAGCATCAAAGAGGTGGCAACTTCGGTCCAGTTGACTCTGAGGTCCAAGAAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000147409.2 ENSMUST00000199489.5 |
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| CDS CCA 72 bp | GTGAACTGGTCCTTGAGGAACCCTTCAAACCCAGACTaGGTTGTTTTCAAGACCTTGAGGTCTTTGATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VNWSLRNPSNPD*VVFKTLRSLIP Trigger: TGGAATCAAAGACCTCAAGGTCTTGAAAACAACCCAGTCTGGGTTTGAAGGGTTCCTCAAGGACCAGTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029837.14 ENSMUST00000121133.2 ENSMUST00000199489.5 |
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| CDS GCA 72 bp | GTTAAAAGAAGAGAGGAAGTGCTCACAGATGTTCATTaGAAAGGTCTCGATGTTTCTGATCCCTCTGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VKRREEVLTDVH*KGLDVSDPSEL Trigger: AAGCTCAGAGGGATCAGAAACATCGAGACCTTTGCAATGAACATCTGTGAGCACTTCCTCTCTTCTTTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029837.14 ENSMUST00000199489.5 |
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| CDS GCA 72 bp | GTTAAAAGAAGAGAGGAAGTGCTCACAGATGTTCATTaGAAAGGTCTCGATGTTTCTGATCTTTCCGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: VKRREEVLTDVH*KGLDVSDLSVV Trigger: AACTACGGAAAGATCAGAAACATCGAGACCTTTGCAATGAACATCTGTGAGCACTTCCTCTCTTCTTTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121133.2 |
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