Pregenerated sensors for UNG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029591Ensembl transcript IDs: ENSMUST00000031587.13, ENSMUST00000102584.11, ENSMUST00000112275.8, ENSMUST00000143455.6
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGATAAAGCGGACAGCAGCAGGCACCAAACTGCTGGTCCAAAGGTaGAGATCTTTCCTCCCACCCCAGAGCAGCACACGGGACCGAGGG | + |
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Preference number: 1 (lower is better) Translates to: RIKRTAAGTKLLVQR*RSFLPPQSSTRDRG Trigger: CCCTCGGTCCCGTGTGCTGCTCTGGGGTGGGAGGAAAGATCTGCACCTTTGGACCAGCAGTTTGGTGCCTGCTGCTGTCCGCTTTATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR GCA 90 bp | TGGCCGGGCCTGGAGAGTTCAAACCTAGTGCCAGGCAAGAGGTTCTaGCTGCCAGAGCTGCAGTTTCTGTGTCCTGGTTGGCTCATGATG | + |
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Preference number: 1 (lower is better) Translates to: WPGLESSNLVPGKRF*LPELQFLCPGWLMM Trigger: CATCATGAGCCAACCAGGACACAGAAACTGCAGCTCTGGCAGGCAGAACCTCTTGCCTGGCACTAGGTTTGAACTCTCCAGGCCCGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR CCA 90 bp | GCCAGGCAAGAGGTTCTGCCTGCCAGAGCTGCAGTTTCTGTGTCCTaGTTGGCTCATGATGGTCCTATAGAGATCTATCCGTGTCATTTC | + |
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Preference number: 1 (lower is better) Translates to: ARQEVLPARAAVSVS*LAHDGPIEIYPCHF Trigger: GAAATGACACGGATAGATCTCTATAGGACCATCATGAGCCAACCAGGACACAGAAACTGCAGCTCTGGCAGGCAGAACCTCTTGCCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR TCA 90 bp | GGTTCTGCCTGCCAGAGCTGCAGTTTCTGTGTCCTGGTTGGCTCATaGTGGTCCTATAGAGATCTATCCGTGTCATTTCTCCACTCACAC | + |
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Preference number: 1 (lower is better) Translates to: GSACQSCSFCVLVGS*WSYRDLSVSFLHSH Trigger: GTGTGAGTGGAGAAATGACACGGATAGATCTCTATAGGACCATCATGAGCCAACCAGGACACAGAAACTGCAGCTCTGGCAGGCAGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR TCA 90 bp | GACTCACCAACACCCAAGGGTTCCTTTCCAGACAAAAGGGCCTTTTaGAGCACACACACACACACACACACACACACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: DSPTPKGSFPDKRAF*STHTHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTCAAAAGGCCCTTTTGTCTGGAAAGGAACCCTTGGGTGTTGGTGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR GCA 90 bp | AGGAAACCCACCCACCCTCACTTAAAAACAAATCTATCCCATTCCTaGTTCGCTCAACTTCGGAGCCTGCAAAGGCAAAGGCAAGACGCA | + |
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Preference number: 1 (lower is better) Translates to: RKPTHPHLKTNLSHS*FAQLRSLQRQRQDA Trigger: TGCGTCTTGCCTTTGCCTTTGCAGGCTCCGAAGTTGAGCGAAGCAGGAATGGGATAGATTTGTTTTTAAGTGAGGGTGGGTGGGTTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCCCACCCCAGAGCAGCACACGGGACCGAGGGTGTGTCCGCTGGTCTGAGACCGCTGTGGACAGATaGGGCCTGTGGGCGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: FLPPQSSTRDRGCVRWSETAVDR*GLWAGG Trigger: CCCACCCGCCCACAGGCCGCATCTGTCCACAGCGGT...CTCAGACCAGCGGACACACCCTCGGTCCCGTGTGCTGCTCTGGGGTGGGAGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCGCGGCAGTCTGCTGTCTGCAGAGAGGAGGAAACAACTCCACCGCCACCAGGGAGAGCGGCCACTGTaGACCCAGGGAGAACCCCGC | + |
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Preference number: 2 (lower is better) Translates to: KRGSLLSAERRKQLHRHQGERPL*TQGEPR Trigger: GCGGGGTTCTCCCTGGGTTCACAGTGGCCGCTCTCC...CTGGTGGCGGTGGAGTTGTTTCCTCCTCTCTGCAGACAGCAGACTGCCGCGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCCAGGAACCCTCTGTGCACCGACAGCGGGGAGGGGTGAGCTGTCTGCAGGAACCGCGTCCGTGAACTaGTCCCAGCCCCTCTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: IPGTLCAPTAGRGELSAGTASVN*SQPLSL Trigger: TAAGGAGAGGGGCTGGGAGCAGTTCACGGACGCGGT...TCCTGCAGACAGCTCACCCCTCCCCGCTGTCGGTGCACAGAGGGTTCCTGGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143455.6 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCCCACCCCAGAGCAGCACACGGGACCGAGGGTGTGTCCGCTGGTCTGAGCCAGGCAAGAGGTTCTaGCTGCCAGAGCTGCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: FLPPQSSTRDRGCVRWSEPGKRF*LPELQF Trigger: AAACTGCAGCTCTGGCAGGCAGAACCTCTTGCCTGG...CTCAGACCAGCGGACACACCCTCGGTCCCGTGTGCTGCTCTGGGGTGGGAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCCAGGAACCCTCTGTGCACCGACAGCGGGGAGGGGTGAGCTGTCTGCAGGATCTCCTTATGGGAATTaGCTTGGTGGGCGCGGACAG | + |
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Preference number: 2 (lower is better) Translates to: IPGTLCAPTAGRGELSAGSPYGN*LGGRGQ Trigger: CTGTCCGCGCCCACCAAGCCAATTCCCATAAGGAGA...TCCTGCAGACAGCTCACCCCTCCCCGCTGTCGGTGCACAGAGGGTTCCTGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143455.6 |
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| 3UTR-3UTR GCA 90 bp | CACCTTGGAGTTAGATCCCCAGCACCACACACACCAAGCGCGGCAGTCTGCTGTCTGCTGGTCCAAAGGTaGAGATCTTTCCTCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: HLGVRSPAPHTPSAAVCCLLVQR*RSFLPP Trigger: GGGTGGGAGGAAAGATCTGCACCTTTGGACCAGCAG...ACAGCAGACTGCCGCGCTTGGTGTGTGTGGTGCTGGGGATCTAACTCCAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCGCGGCAGTCTGCTGTCTGCAGAGAGGAGGAAACAACTCCACCGCCACCAGCTCAACTTCGGAGCCTaGAAAGGCAAAGGCAAGACG | + |
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Preference number: 2 (lower is better) Translates to: KRGSLLSAERRKQLHRHQLNFGA*KGKGKT Trigger: CGTCTTGCCTTTGCCTTTGCAGGCTCCGAAGTTGAG...CTGGTGGCGGTGGAGTTGTTTCCTCCTCTCTGCAGACAGCAGACTGCCGCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR GCA 90 bp | CACCTTGGAGTTAGATCCCCAGCACCACACACACCAAGCGCGGCAGTCTGCTGTTCTGCCTGCCAGAGCTaGAGTTTCTGTGTCCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: HLGVRSPAPHTPSAAVCCSACQS*SFCVLV Trigger: AACCAGGACACAGAAACTGCAGCTCTGGCAGGCAGA...ACAGCAGACTGCCGCGCTTGGTGTGTGTGGTGCTGGGGATCTAACTCCAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTTGCAGAAAGACAACTTGTGTGAACTCAGCCCCTAAGAAACAGCACCTTGGAGAGCGGCCACTGTaGACCCAGGGAGAACCCCGC | + |
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Preference number: 2 (lower is better) Translates to: QCCRKTTCVNSAPKKQHLGERPL*TQGEPR Trigger: GCGGGGTTCTCCCTGGGTTCACAGTGGCCGCTCTCC...AAGGTGCTGTTTCTTAGGGGCTGAGTTCACACAAGTTGTCTTTCTGCAACACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR GCA 90 bp | AACAGCACCTTGGAGTTAGATCCCCAGCACCACACACACCAAGCGCGGCAGTCTTCTGCCTGCCAGAGCTaGAGTTTCTGTGTCCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: NSTLELDPQHHTHQARQSSACQS*SFCVLV Trigger: AACCAGGACACAGAAACTGCAGCTCTGGCAGGCAGA...AGACTGCCGCGCTTGGTGTGTGTGGTGCTGGGGATCTAACTCCAAGGTGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGGACTCACGGAATCCAGCTTGTAAACTCAGTGAAGATTGTCTTTCAGAAACCGCTGTGGACAGATaGGGCCTGTGGGCGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: QLDSRNPACKLSEDCLSETAVDR*GLWAGG Trigger: CCCACCCGCCCACAGGCCGCATCTGTCCACAGCGGT...TTCTGAAAGACAATCTTCACTGAGTTTACAAGCTGGATTCCGTGAGTCCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR TCA 90 bp | CTATCCCATTCCTGCTTCGCTCAACTTCGGAGCCTGCAAAGGCAAAGGCAAGACGTGTGTCCGCTGGTCTaGGAAGTAGGTGTGTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: LSHSCFAQLRSLQRQRQDVCPLV*EVGVSQ Trigger: TTGAGACACACCTACTTCTCAGACCAGCGGACACAC...GTCTTGCCTTTGCCTTTGCAGGCTCCGAAGTTGAGCGAAGCAGGAATGGGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR TCA 90 bp | TATCCCATTCCTGCTTCGCTCAACTTCGGAGCCTGCAAAGGCAAAGGCAAGACGGTGTGTCCGCTGGTCTaGGAAGTAGGTGTGTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: YPIPASLNFGACKGKGKTVCPLV*EVGVSQ Trigger: TTGAGACACACCTACTTCTCAGACCAGCGGACACAC...CGTCTTGCCTTTGCCTTTGCAGGCTCCGAAGTTGAGCGAAGCAGGAATGGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGCCCCTAAGAAACAGCACCTTGGAGTTAGATCCCCAGCACCACACACACCATCTGCCTGCCAGAGCTaGAGTTTCTGTGTCCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: SAPKKQHLGVRSPAPHTPSACQS*SFCVLV Trigger: AACCAGGACACAGAAACTGCAGCTCTGGCAGGCAGA...TGGTGTGTGTGGTGCTGGGGATCTAACTCCAAGGTGCTGTTTCTTAGGGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR GCA 90 bp | AACTCAGCCCCTAAGAAACAGCACCTTGGAGTTAGATCCCCAGCACCACACACACTGCTGGTCCAAAGGTaGAGATCTTTCCTCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: NSAPKKQHLGVRSPAPHTLLVQR*RSFLPP Trigger: GGGTGGGAGGAAAGATCTGCACCTTTGGACCAGCAG...TGTGTGTGGTGCTGGGGATCTAACTCCAAGGTGCTGTTTCTTAGGGGCTGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGAACCCCGCCCCCTTTGTGATCAGGAAGCTCATTCAGTTGTAAGCCAGACTCAGCAGGCACCAAACTaGTGGTCCAAAGGTGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: GEPRPLCDQEAHSVVSQTQQAPN*WSKGAD Trigger: ATCTGCACCTTTGGACCAGCAGTTTGGTGCCTGCTG...AGTCTGGCTTACAACTGAATGAGCTTCCTGATCACAAAGGGGGCGGGGTTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR TCA 90 bp | AACTCAGCCCCTAAGAAACAGCACCTTGGAGTTAGATCCCCAGCACCACACACAGTGTGTCCGCTGGTCTaGGAAGTAGGTGTGTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: NSAPKKQHLGVRSPAPHTVCPLV*EVGVSQ Trigger: TTGAGACACACCTACTTCTCAGACCAGCGGACACAC...TGTGTGTGGTGCTGGGGATCTAACTCCAAGGTGCTGTTTCTTAGGGGCTGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR CAA 90 bp | AGGCAAGAGGTTCTGCCTGCCAGAGCTGCAGTTTCTGTGTCCTGGTaGGCTCATGATGGTCCTATAGAGATCTATCCGTGTCATTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: RQEVLPARAAVSVSW*AHDGPIEIYPCHFS Trigger: GGAGAAATGACACGGATAGATCTCTATAGGACCATCATGAGCCAACCAGGACACAGAAACTGCAGCTCTGGCAGGCAGAACCTCTTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGATCAGGAAGCTCATTCAGTTGTAAGCCAGACTTCTCAGGACTCACCAACACCAGGCAAGAGGTTCTaGCTGCCAGAGCTGCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: CDQEAHSVVSQTSQDSPTPGKRF*LPELQF Trigger: AAACTGCAGCTCTGGCAGGCAGAACCTCTTGCCTGG...TGTTGGTGAGTCCTGAGAAGTCTGGCTTACAACTGAATGAGCTTCCTGATCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR CCA 90 bp | GCCACCAGGAAACCCACCCACCCTCACTTAAAAACAAATCTATCCCATTCCTGCCAGGCACCAAACTGCTaGTCCAAAGGTGCAGATCTT | + |
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Preference number: 2 (lower is better) Translates to: ATRKPTHPHLKTNLSHSCQAPNC*SKGADL Trigger: AAGATCTGCACCTTTGGACCAGCAGTTTGGTGCCTG...GCAGGAATGGGATAGATTTGTTTTTAAGTGAGGGTGGGTGGGTTTCCTGGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGGACTCACGGAATCCAGCTTGTAAACTCAGTGAAGATTGTCTTTCAGAACTGCTGGTCCAAAGGTaGAGATCTTTCCTCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: QLDSRNPACKLSEDCLSELLVQR*RSFLPP Trigger: GGGTGGGAGGAAAGATCTGCACCTTTGGACCAGCAG...TTCTGAAAGACAATCTTCACTGAGTTTACAAGCTGGATTCCGTGAGTCCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGGACTCACGGAATCCAGCTTGTAAACTCAGTGAAGATTGTCTTTCAGAACAGCAGGCACCAAACTaGTGGTCCAAAGGTGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: QLDSRNPACKLSEDCLSEQQAPN*WSKGAD Trigger: ATCTGCACCTTTGGACCAGCAGTTTGGTGCCTGCTG...TTCTGAAAGACAATCTTCACTGAGTTTACAAGCTGGATTCCGTGAGTCCAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR CAA 90 bp | ACACACACACACACACACACACACACACACACACACACACACACTTaGAAATCTCTAACTCTAAAGGATAAAGCGGACAGCAGCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHTHTHTHT*KSLTLKDKADSSRH Trigger: GTGCCTGCTGCTGTCCGCTTTATCCTTTAGAGTTAGAGATTTCAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGGACTCACGGAATCCAGCTTGTAAACTCAGTGAAGATTGTCTTTCAGAACAGGCACCAAACTGCTaGTCCAAAGGTGCAGATCTT | + |
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Preference number: 2 (lower is better) Translates to: QLDSRNPACKLSEDCLSEQAPNC*SKGADL Trigger: AAGATCTGCACCTTTGGACCAGCAGTTTGGTGCCTG...TTCTGAAAGACAATCTTCACTGAGTTTACAAGCTGGATTCCGTGAGTCCAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGGACTCACGGAATCCAGCTTGTAAACTCAGTGAAGATTGTCTTTCAGAAGAAAGACAACTTGTGTaGACTCAGCCCCTAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: QLDSRNPACKLSEDCLSEERQLV*TQPLRN Trigger: GTTTCTTAGGGGCTGAGTTCACACAAGTTGTCTTTC...TTCTGAAAGACAATCTTCACTGAGTTTACAAGCTGGATTCCGTGAGTCCAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR TCA 72 bp | GGCAAAGGCAAGACGCAGGGTGGAGAGCGGCCACTGTaGACCCAGGGAGAACCCCGCCCCCTTTGTGATCAG | + |
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Preference number: 3 (lower is better) Translates to: GKGKTQGGERPL*TQGEPRPLCDQ Trigger: CTGATCACAAAGGGGGCGGGGTTCTCCCTGGGTTCACAGTGGCCGCTCTCCACCCTGCGTCTTGCCTTTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR CCA 72 bp | CTTCGGAGCCTGCAAAGGCAAAGGCAAGACGCAGGGTaGAGAGCGGCCACTGTGAACCCAGGGAGAACCCCG | + |
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Preference number: 3 (lower is better) Translates to: LRSLQRQRQDAG*RAATVNPGRTP Trigger: CGGGGTTCTCCCTGGGTTCACAGTGGCCGCTCTCCACCCTGCGTCTTGCCTTTGCCTTTGCAGGCTCCGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCCAGGAACCCTCTGTGCACCGACAGCGGGGAGGGGTGAGCTGTCTGCAGGAACAGTGAGGACGGCGTaGAGGAGGAGGACACCTTGT | + |
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Preference number: 3 (lower is better) Translates to: IPGTLCAPTAGRGELSAGTVRTA*RRRTPC Trigger: ACAAGGTGTCCTCCTCCTCAACGCCGTCCTCACTGT...TCCTGCAGACAGCTCACCCCTCCCCGCTGTCGGTGCACAGAGGGTTCCTGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143455.6 |
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| 3UTR-3UTR CAA 90 bp | ATCCCAGGAACCCTCTGTGCACCGACAGCGGGGAGGGGTGAGCTGTCTGCAGGACTCTCCTTATGGGAATaGGCTTGGTGGGCGCGGACA | + |
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Preference number: 3 (lower is better) Translates to: IPGTLCAPTAGRGELSAGLSLWE*AWWART Trigger: TGTCCGCGCCCACCAAGCCAATTCCCATAAGGAGAG...TCCTGCAGACAGCTCACCCCTCCCCGCTGTCGGTGCACAGAGGGTTCCTGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143455.6 |
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| 3UTR GCA 72 bp | CGGACAGCAGCAGGCACCAAACTGCTGGTCCAAAGGTaGAGATCTTTCCTCCCACCCCAGAGCAGCACACGG | + |
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Preference number: 3 (lower is better) Translates to: RTAAGTKLLVQR*RSFLPPQSSTR Trigger: CCGTGTGCTGCTCTGGGGTGGGAGGAAAGATCTGCACCTTTGGACCAGCAGTTTGGTGCCTGCTGCTGTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR GCA 72 bp | AGATCCCCAGCACCACACACACCAAGCGCGGCAGTCTaGTGTCTGCAGAGAGGAGGAAACAACTCCACCGCC | + |
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Preference number: 3 (lower is better) Translates to: RSPAPHTPSAAV*CLQRGGNNSTA Trigger: GGCGGTGGAGTTGTTTCCTCCTCTCTGCAGACAGCAGACTGCCGCGCTTGGTGTGTGTGGTGCTGGGGATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR CCA 72 bp | GCTGGTCTGAGAAGTAGGTGTGTCTCAACAGCCACCTaGCCGGGCCTGGAGAGTTCAAACCTAGTGCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: AGLRSRCVSTAT*PGLESSNLVPG Trigger: GCCTGGCACTAGGTTTGAACTCTCCAGGCCCGGCCAGGTGGCTGTTGAGACACACCTACTTCTCAGACCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCTCCCACCCCAGAGCAGCACACGGGACCGAGGGTGTGTCCGCTGGTCTGAGGTTTCTGTGTCCTGGTaGGCTCATGATGGTCCTATA | + |
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Preference number: 3 (lower is better) Translates to: FLPPQSSTRDRGCVRWSEVSVSW*AHDGPI Trigger: TATAGGACCATCATGAGCCAACCAGGACACAGAAAC...CTCAGACCAGCGGACACACCCTCGGTCCCGTGTGCTGCTCTGGGGTGGGAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR GCA 72 bp | ATCTATCCCATTCCTGCTTCGCTCAACTTCGGAGCCTaGAAAGGCAAAGGCAAGACGCAGGGTGGAGAGCGG | + |
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Preference number: 3 (lower is better) Translates to: IYPIPASLNFGA*KGKGKTQGGER Trigger: CCGCTCTCCACCCTGCGTCTTGCCTTTGCCTTTGCAGGCTCCGAAGTTGAGCGAAGCAGGAATGGGATAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR TCA 72 bp | GCCACTGTGAACCCAGGGAGAACCCCGCCCCCTTTGTaGTCAGGAAGCTCATTCAGTTGTAAGCCAGACTTC | + |
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Preference number: 3 (lower is better) Translates to: ATVNPGRTPPPL*SGSSFSCKPDF Trigger: GAAGTCTGGCTTACAACTGAATGAGCTTCCTGATCACAAAGGGGGCGGGGTTCTCCCTGGGTTCACAGTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR GCA 72 bp | CTGGAGAGTTCAAACCTAGTGCCAGGCAAGAGGTTCTaGCTGCCAGAGCTGCAGTTTCTGTGTCCTGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: LESSNLVPGKRF*LPELQFLCPGW Trigger: CCAACCAGGACACAGAAACTGCAGCTCTGGCAGGCAGAACCTCTTGCCTGGCACTAGGTTTGAACTCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
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| 3UTR-3UTR CAA 90 bp | AACAGCACCTTGGAGTTAGATCCCCAGCACCACACACACCAAGCGCGGCAGTCTGTTTCTGTGTCCTGGTaGGCTCATGATGGTCCTATA | + |
|
Preference number: 3 (lower is better) Translates to: NSTLELDPQHHTHQARQSVSVSW*AHDGPI Trigger: TATAGGACCATCATGAGCCAACCAGGACACAGAAAC...AGACTGCCGCGCTTGGTGTGTGTGGTGCTGGGGATCTAACTCCAAGGTGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| 3UTR CCA 72 bp | GAGGTTCTGCCTGCCAGAGCTGCAGTTTCTGTGTCCTaGTTGGCTCATGATGGTCCTATAGAGATCTATCCG | + |
|
Preference number: 3 (lower is better) Translates to: EVLPARAAVSVS*LAHDGPIEIYP Trigger: CGGATAGATCTCTATAGGACCATCATGAGCCAACCAGGACACAGAAACTGCAGCTCTGGCAGGCAGAACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCCCATTCCTGCTTCGCTCAACTTCGGAGCCTGCAAAGGCAAAGGCAAGACGGTTTCTGTGTCCTGGTaGGCTCATGATGGTCCTATA | + |
|
Preference number: 3 (lower is better) Translates to: YPIPASLNFGACKGKGKTVSVSW*AHDGPI Trigger: TATAGGACCATCATGAGCCAACCAGGACACAGAAAC...CGTCTTGCCTTTGCCTTTGCAGGCTCCGAAGTTGAGCGAAGCAGGAATGGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCGCGGCAGTCTGCTGTCTGCAGAGAGGAGGAAACAACTCCACCGCCACCAGACACACACACACACTTaGAAATCTCTAACTCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KRGSLLSAERRKQLHRHQTHTHT*KSLTLK Trigger: CTTTAGAGTTAGAGATTTCAAAGTGTGTGTGTGTGT...CTGGTGGCGGTGGAGTTGTTTCCTCCTCTCTGCAGACAGCAGACTGCCGCGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTGGAGTTAGATCCCCAGCACCACACACACCAAGCGCGGCAGTCTGCTGTACACACACACACACTTaGAAATCTCTAACTCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HLGVRSPAPHTPSAAVCCTHTHT*KSLTLK Trigger: CTTTAGAGTTAGAGATTTCAAAGTGTGTGTGTGTGT...ACAGCAGACTGCCGCGCTTGGTGTGTGTGGTGCTGGGGATCTAACTCCAAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| 3UTR TCA 72 bp | ACACCCAAGGGTTCCTTTCCAGACAAAAGGGCCTTTTaGAGCACACACACACACACACACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: TPKGSFPDKRAF*STHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTCAAAAGGCCCTTTTGTCTGGAAAGGAACCCTTGGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| 3UTR TCA 72 bp | TGCCAGAGCTGCAGTTTCTGTGTCCTGGTTGGCTCATaGTGGTCCTATAGAGATCTATCCGTGTCATTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: CQSCSFCVLVGS*WSYRDLSVSFL Trigger: GAGAAATGACACGGATAGATCTCTATAGGACCATCATGAGCCAACCAGGACACAGAAACTGCAGCTCTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| 3UTR GCA 72 bp | ACCCACCCTCACTTAAAAACAAATCTATCCCATTCCTaGTTCGCTCAACTTCGGAGCCTGCAAAGGCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: THPHLKTNLSHS*FAQLRSLQRQR Trigger: CCTTTGCCTTTGCAGGCTCCGAAGTTGAGCGAAGCAGGAATGGGATAGATTTGTTTTTAAGTGAGGGTGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTGGACTCACGGAATCCAGCTTGTAAACTCAGTGAAGATTGTCTTTCAGAACTAAGAAACAGCACCTaGGAGTTAGATCCCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: QLDSRNPACKLSEDCLSELRNST*ELDPQH Trigger: GTGCTGGGGATCTAACTCCAAGGTGCTGTTTCTTAG...TTCTGAAAGACAATCTTCACTGAGTTTACAAGCTGGATTCCGTGAGTCCAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| 3UTR TCA 72 bp | ATAACGTTCTCCAGTGTTGCAGAAAGACAACTTGTGTaGACTCAGCCCCTAAGAAACAGCACCTTGGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: ITFSSVAERQLV*TQPLRNSTLEL Trigger: TAACTCCAAGGTGCTGTTTCTTAGGGGCTGAGTTCACACAAGTTGTCTTTCTGCAACACTGGAGAACGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGCGCGGACAGTGAGGACGGCGTTGAGGAGGAGGACACCTTGTCGGGCCCATGCGGGCGGCGAGCCTaGGCAGCGCCGCGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGADSEDGVEEEDTLSGPCGRRA*AAPRPC Trigger: ACAAGGCCGCGGCGCTGCTCAGGCTCGCCGCCCGCA...TGGGCCCGACAAGGTGTCCTCCTCCTCAACGCCGTCCTCACTGTCCGCGCCCAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143455.6 |
||
| CDS-3UTR GCA 90 bp | GTGGGCGCGGACAGTGAGGACGGCGTTGAGGAGGAGGACACCTTGTCGGGCCCATTGGCGGGGCTGGCCTaGCGGGAGTCAGAGTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGADSEDGVEEEDTLSGPLAGLA*RESESG Trigger: CCCCGACTCTGACTCCCGGCAGGCCAGCCCCGCCAA...TGGGCCCGACAAGGTGTCCTCCTCCTCAACGCCGTCCTCACTGTCCGCGCCCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143455.6 |
||
| CDS-3UTR GCA 90 bp | GCGGCAGCTGAAAGCACCGCTGTGGACAGATGCGGCCTGTGGGCGGGTGGGCGGACCGCGTCCGTGAACTaGTCCCAGCCCCTCTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AAAESTAVDRCGLWAGGRTASVN*SQPLSL Trigger: TAAGGAGAGGGGCTGGGAGCAGTTCACGGACGCGGT...CCGCCCACCCGCCCACAGGCCGCATCTGTCCACAGCGGTGCTTTCAGCTGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGCGCGGACAGTGAGGACGGCGTTGAGGAGGAGGACACCTTGTCGGGCCCACCTTGTTCCTCTGGATaGGGACGAGCTGCTCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VGADSEDGVEEEDTLSGPPCSSG*GRAARR Trigger: GCGCCGAGCAGCTCGTCCGCATCCAGAGGAACAAGG...TGGGCCCGACAAGGTGTCCTCCTCCTCAACGCCGTCCTCACTGTCCGCGCCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143455.6 |
||
| CDS-3UTR CCA 90 bp | GTGGGCGCGGACAGTGAGGACGGCGTTGAGGAGGAGGACACCTTGTCGGGCCCAGCGGCCTTGTTCCTCTaGATGCGGACGAGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VGADSEDGVEEEDTLSGPAALFL*MRTSCS Trigger: CGAGCAGCTCGTCCGCATCCAGAGGAACAAGGCCGC...TGGGCCCGACAAGGTGTCCTCCTCCTCAACGCCGTCCTCACTGTCCGCGCCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143455.6 |
||
| CDS-3UTR TCA 90 bp | CATTCCTGCTTCGCTCAACTTCGGAGCCTGCAAAGGCAAAGGCAAGACGCAGGGTGCGGGCGGCGAGCCTaGGCAGCGCCGCGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSCFAQLRSLQRQRQDAGCGRRA*AAPRPC Trigger: ACAAGGCCGCGGCGCTGCTCAGGCTCGCCGCCCGCA...CCCTGCGTCTTGCCTTTGCCTTTGCAGGCTCCGAAGTTGAGCGAAGCAGGAATG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 |
||
| CDS-3UTR TCA 90 bp | AAACTGCTGGTCCAAAGGTGCAGATCTTTCCTCCCACCCCAGAGCAGCACACGGTGCGGGCGGCGAGCCTaGGCAGCGCCGCGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLLVQRCRSFLPPQSSTRCGRRA*AAPRPC Trigger: ACAAGGCCGCGGCGCTGCTCAGGCTCGCCGCCCGCA...CCGTGTGCTGCTCTGGGGTGGGAGGAAAGATCTGCACCTTTGGACCAGCAGTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 |
||
| CDS-3UTR TCA 90 bp | GCGGCAGCTGAAAGCACCGCTGTGGACAGATGCGGCCTGTGGGCGGGTGGGCGGCTGGTCTTTGGACACTaGAGCAGAGCCCGTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AAAESTAVDRCGLWAGGRLVFGH*SRAREL Trigger: AAGCTCACGGGCTCTGCTTCAGTGTCCAAAGACCAG...CCGCCCACCCGCCCACAGGCCGCATCTGTCCACAGCGGTGCTTTCAGCTGCCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CCA 90 bp | GCGGCAGCTGAAAGCACCGCTGTGGACAGATGCGGCCTGTGGGCGGGTGGGCGGCAAACTGGGCGGGGGTaGAACTGGTCTTTGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: AAAESTAVDRCGLWAGGRQTGRG*NWSLDT Trigger: AGTGTCCAAAGACCAGTTCCACCCCCGCCCAGTTTG...CCGCCCACCCGCCCACAGGCCGCATCTGTCCACAGCGGTGCTTTCAGCTGCCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR GCA 90 bp | AAGCGCGGCAGTCTGCTGTCTGCAGAGAGGAGGAAACAACTCCACCGCCACCAGCCTTGTTCCTCTGGATaGGGACGAGCTGCTCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KRGSLLSAERRKQLHRHQPCSSG*GRAARR Trigger: GCGCCGAGCAGCTCGTCCGCATCCAGAGGAACAAGG...CTGGTGGCGGTGGAGTTGTTTCCTCCTCTCTGCAGACAGCAGACTGCCGCGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCCACCCCAGAGCAGCACACGGGACCGAGGGTGTGTCCGCTGGTCTGAGCAAACTGGGCGGGGGTaGAACTGGTCTTTGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: FLPPQSSTRDRGCVRWSEQTGRG*NWSLDT Trigger: AGTGTCCAAAGACCAGTTCCACCCCCGCCCAGTTTG...CTCAGACCAGCGGACACACCCTCGGTCCCGTGTGCTGCTCTGGGGTGGGAGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR GCA 90 bp | CTATCCCATTCCTGCTTCGCTCAACTTCGGAGCCTGCAAAGGCAAAGGCAAGACTTGGCGGGGCTGGCCTaGCGGGAGTCAGAGTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSHSCFAQLRSLQRQRQDLAGLA*RESESG Trigger: CCCCGACTCTGACTCCCGGCAGGCCAGCCCCGCCAA...GTCTTGCCTTTGCCTTTGCAGGCTCCGAAGTTGAGCGAAGCAGGAATGGGATAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102584.11 |
||
| CDS-3UTR CCA 90 bp | TGCAGATCTTTCCTCCCACCCCAGAGCAGCACACGGGACCGAGGGTGTGTCCGCGGTGGAACTGGTCTTTaGACACTGAAGCAGAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CRSFLPPQSSTRDRGCVRGGTGL*TLKQSP Trigger: CGGGCTCTGCTTCAGTGTCCAAAGACCAGTTCCACC...GCGGACACACCCTCGGTCCCGTGTGCTGCTCTGGGGTGGGAGGAAAGATCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR GCA 90 bp | AAACTGCTGGTCCAAAGGTGCAGATCTTTCCTCCCACCCCAGAGCAGCACACGGCCTTGTTCCTCTGGATaGGGACGAGCTGCTCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KLLVQRCRSFLPPQSSTRPCSSG*GRAARR Trigger: GCGCCGAGCAGCTCGTCCGCATCCAGAGGAACAAGG...CCGTGTGCTGCTCTGGGGTGGGAGGAAAGATCTGCACCTTTGGACCAGCAGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 |
||
| CDS-3UTR TCA 90 bp | CATTCCTGCTTCGCTCAACTTCGGAGCCTGCAAAGGCAAAGGCAAGACGCAGGGAGGCCACTCAGGTTCTaGTTCAGCCAGGACACGACC | + |
|
Preference number: 4 (lower is better) Translates to: HSCFAQLRSLQRQRQDAGRPLRF*FSQDTT Trigger: GGTCGTGTCCTGGCTGAATCAGAACCTGAGTGGCCT...CCCTGCGTCTTGCCTTTGCCTTTGCAGGCTCCGAAGTTGAGCGAAGCAGGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CCA 90 bp | CTATCCCATTCCTGCTTCGCTCAACTTCGGAGCCTGCAAAGGCAAAGGCAAGACGCGGCCTTGTTCCTCTaGATGCGGACGAGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSHSCFAQLRSLQRQRQDAALFL*MRTSCS Trigger: CGAGCAGCTCGTCCGCATCCAGAGGAACAAGGCCGC...GTCTTGCCTTTGCCTTTGCAGGCTCCGAAGTTGAGCGAAGCAGGAATGGGATAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 |
||
| CDS-3UTR CCA 90 bp | GGCACCAAACTGCTGGTCCAAAGGTGCAGATCTTTCCTCCCACCCCAGAGCAGCCAAACTGGGCGGGGGTaGAACTGGTCTTTGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: GTKLLVQRCRSFLPPQSSQTGRG*NWSLDT Trigger: AGTGTCCAAAGACCAGTTCCACCCCCGCCCAGTTTG...GCTGCTCTGGGGTGGGAGGAAAGATCTGCACCTTTGGACCAGCAGTTTGGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR TCA 90 bp | AAACTGCTGGTCCAAAGGTGCAGATCTTTCCTCCCACCCCAGAGCAGCACACGGCTGGTCTTTGGACACTaGAGCAGAGCCCGTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLLVQRCRSFLPPQSSTRLVFGH*SRAREL Trigger: AAGCTCACGGGCTCTGCTTCAGTGTCCAAAGACCAG...CCGTGTGCTGCTCTGGGGTGGGAGGAAAGATCTGCACCTTTGGACCAGCAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR TCA 90 bp | ACCAAACTGCTGGTCCAAAGGTGCAGATCTTTCCTCCCACCCCAGAGCAGCACAAGGCCACTCAGGTTCTaGTTCAGCCAGGACACGACC | + |
|
Preference number: 4 (lower is better) Translates to: TKLLVQRCRSFLPPQSSTRPLRF*FSQDTT Trigger: GGTCGTGTCCTGGCTGAATCAGAACCTGAGTGGCCT...TGTGCTGCTCTGGGGTGGGAGGAAAGATCTGCACCTTTGGACCAGCAGTTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCCACCCCAGAGCAGCACACGGGACCGAGGGTGTGTCCGCTGGTCTGAGTTCTTGCCAGACTTCTaGAGCAGTTCATTGGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FLPPQSSTRDRGCVRWSEFLPDF*SSSLAL Trigger: TAAAGCCAATGAACTGCTCCAGAAGTCTGGCAAGAA...CTCAGACCAGCGGACACACCCTCGGTCCCGTGTGCTGCTCTGGGGTGGGAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR GCA 90 bp | AACTCAGCCCCTAAGAAACAGCACCTTGGAGTTAGATCCCCAGCACCACACACAACCGCGTCCGTGAACTaGTCCCAGCCCCTCTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: NSAPKKQHLGVRSPAPHTTASVN*SQPLSL Trigger: TAAGGAGAGGGGCTGGGAGCAGTTCACGGACGCGGT...TGTGTGTGGTGCTGGGGATCTAACTCCAAGGTGCTGTTTCTTAGGGGCTGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAACCCCGCCCCCTTTGTGATCAGGAAGCTCATTCAGTTGTAAGCCAGACTCTGGTCTTTGGACACTaGAGCAGAGCCCGTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GEPRPLCDQEAHSVVSQTLVFGH*SRAREL Trigger: AAGCTCACGGGCTCTGCTTCAGTGTCCAAAGACCAG...AGTCTGGCTTACAACTGAATGAGCTTCCTGATCACAAAGGGGGCGGGGTTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR TCA 90 bp | AACTCAGCCCCTAAGAAACAGCACCTTGGAGTTAGATCCCCAGCACCACACACAAGGCCACTCAGGTTCTaGTTCAGCCAGGACACGACC | + |
|
Preference number: 4 (lower is better) Translates to: NSAPKKQHLGVRSPAPHTRPLRF*FSQDTT Trigger: GGTCGTGTCCTGGCTGAATCAGAACCTGAGTGGCCT...TGTGTGTGGTGCTGGGGATCTAACTCCAAGGTGCTGTTTCTTAGGGGCTGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CCA 90 bp | TATCCCATTCCTGCTTCGCTCAACTTCGGAGCCTGCAAAGGCAAAGGCAAGACGCGGATGTCGCACATCTaGGTCCATGTGAACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YPIPASLNFGACKGKGKTRMSHI*VHVNTC Trigger: GCAGGTGTTCACATGGACCCAGATGTGCGACATCCG...CGTCTTGCCTTTGCCTTTGCAGGCTCCGAAGTTGAGCGAAGCAGGAATGGGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCCCCTAAGAAACAGCACCTTGGAGTTAGATCCCCAGCACCACACACACCATCTCCTTATGGGAATTaGCTTGGTGGGCGCGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SAPKKQHLGVRSPAPHTPSPYGN*LGGRGQ Trigger: CTGTCCGCGCCCACCAAGCCAATTCCCATAAGGAGA...TGGTGTGTGTGGTGCTGGGGATCTAACTCCAAGGTGCTGTTTCTTAGGGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTGGACTCACGGAATCCAGCTTGTAAACTCAGTGAAGATTGTCTTTCAGAAACATCTGGGTCCATGTaGACACCTGCTCCGGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QLDSRNPACKLSEDCLSETSGSM*TPAPGA Trigger: CGCCCCCGGAGCAGGTGTTCACATGGACCCAGATGT...TTCTGAAAGACAATCTTCACTGAGTTTACAAGCTGGATTCCGTGAGTCCAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGGACTCACGGAATCCAGCTTGTAAACTCAGTGAAGATTGTCTTTCAGAAGCGGCCTTGTTCCTCTaGATGCGGACGAGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QLDSRNPACKLSEDCLSEAALFL*MRTSCS Trigger: CGAGCAGCTCGTCCGCATCCAGAGGAACAAGGCCGC...TTCTGAAAGACAATCTTCACTGAGTTTACAAGCTGGATTCCGTGAGTCCAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 |
||
| CDS-3UTR CCA 90 bp | GCCACCAGGAAACCCACCCACCCTCACTTAAAAACAAATCTATCCCATTCCTGCGGTGGAACTGGTCTTTaGACACTGAAGCAGAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ATRKPTHPHLKTNLSHSCGGTGL*TLKQSP Trigger: CGGGCTCTGCTTCAGTGTCCAAAGACCAGTTCCACC...GCAGGAATGGGATAGATTTGTTTTTAAGTGAGGGTGGGTGGGTTTCCTGGTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CCA 90 bp | GCCACCAGGAAACCCACCCACCCTCACTTAAAAACAAATCTATCCCATTCCTGCTCTCCTTATGGGAATTaGCTTGGTGGGCGCGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ATRKPTHPHLKTNLSHSCSPYGN*LGGRGQ Trigger: CTGTCCGCGCCCACCAAGCCAATTCCCATAAGGAGA...GCAGGAATGGGATAGATTTGTTTTTAAGTGAGGGTGGGTGGGTTTCCTGGTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| 3UTR CAA 72 bp | GTTCTGCCTGCCAGAGCTGCAGTTTCTGTGTCCTGGTaGGCTCATGATGGTCCTATAGAGATCTATCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLPARAAVSVSW*AHDGPIEIYPC Trigger: ACACGGATAGATCTCTATAGGACCATCATGAGCCAACCAGGACACAGAAACTGCAGCTCTGGCAGGCAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATCAGGAAGCTCATTCAGTTGTAAGCCAGACTTCTCAGGACTCACCAACACGGATGTCGCACATCTaGGTCCATGTGAACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CDQEAHSVVSQTSQDSPTRMSHI*VHVNTC Trigger: GCAGGTGTTCACATGGACCCAGATGTGCGACATCCG...TGTTGGTGAGTCCTGAGAAGTCTGGCTTACAACTGAATGAGCTTCCTGATCACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATCAGGAAGCTCATTCAGTTGTAAGCCAGACTTCTCAGGACTCACCAACAGGTGGAACTGGTCTTTaGACACTGAAGCAGAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CDQEAHSVVSQTSQDSPTGGTGL*TLKQSP Trigger: CGGGCTCTGCTTCAGTGTCCAAAGACCAGTTCCACC...TGTTGGTGAGTCCTGAGAAGTCTGGCTTACAACTGAATGAGCTTCCTGATCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR TCA 90 bp | TCACGGAATCCAGCTTGTAAACTCAGTGAAGATTGTCTTTCAGAAAAGCATGAAACATCTGGGTCCATGTaGACACCTGCTCCGGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SRNPACKLSEDCLSEKHETSGSM*TPAPGA Trigger: CGCCCCCGGAGCAGGTGTTCACATGGACCCAGATGT...TTCATGCTTTTCTGAAAGACAATCTTCACTGAGTTTACAAGCTGGATTCCGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| 3UTR CAA 72 bp | AACACCCAAGGGTTCCTTTCCAGACAAAAGGGCCTTTaGAAGCACACACACACACACACACACACACACACA | + |
|
Preference number: 4 (lower is better) Translates to: NTQGFLSRQKGL*KHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTCAAAAGGCCCTTTTGTCTGGAAAGGAACCCTTGGGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CCA 90 bp | TCACGGAATCCAGCTTGTAAACTCAGTGAAGATTGTCTTTCAGAAAAGCATGAATCTCCTTATGGGAATTaGCTTGGTGGGCGCGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SRNPACKLSEDCLSEKHESPYGN*LGGRGQ Trigger: CTGTCCGCGCCCACCAAGCCAATTCCCATAAGGAGA...TTCATGCTTTTCTGAAAGACAATCTTCACTGAGTTTACAAGCTGGATTCCGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTGCAGAAAGACAACTTGTGTGAACTCAGCCCCTAAGAAACAGCACCTTTTCTTGCCAGACTTCTaGAGCAGTTCATTGGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QCCRKTTCVNSAPKKQHLFLPDF*SSSLAL Trigger: TAAAGCCAATGAACTGCTCCAGAAGTCTGGCAAGAA...AAGGTGCTGTTTCTTAGGGGCTGAGTTCACACAAGTTGTCTTTCTGCAACACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| 3UTR CAA 72 bp | CACACACACACACACACACACACACACACACACACTTaGAAATCTCTAACTCTAAAGGATAAAGCGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHT*KSLTLKDKADS Trigger: GCTGTCCGCTTTATCCTTTAGAGTTAGAGATTTCAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGGACTCACGGAATCCAGCTTGTAAACTCAGTGAAGATTGTCTTTCAGAATTCTTGCCAGACTTCTaGAGCAGTTCATTGGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QLDSRNPACKLSEDCLSEFLPDF*SSSLAL Trigger: TAAAGCCAATGAACTGCTCCAGAAGTCTGGCAAGAA...TTCTGAAAGACAATCTTCACTGAGTTTACAAGCTGGATTCCGTGAGTCCAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS CCA 90 bp | ACGTTGCGGGCGGCGAGCCTGAGCAGCGCCGCGGCCTTGTTCCTCTaGATGCGGACGAGCTGCTCGGCGCTGAGCGGCGAGCCTTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TLRAASLSSAAALFL*MRTSCSALSGEPCS Trigger: CGAGCAAGGCTCGCCGCTCAGCGCCGAGCAGCTCGTCCGCATCCAGAGGAACAAGGCCGCGGCGCTGCTCAGGCTCGCCGCCCGCAACGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS TCA 90 bp | TCCAGCTCTCGCCGAAGCCGGCAGGCACGTTGCGGGCGGCGAGCCTaGGCAGCGCCGCGGCCTTGTTCCTCTGGATGCGGACGAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSRRSRQARCGRRA*AAPRPCSSGCGRAA Trigger: AGCAGCTCGTCCGCATCCAGAGGAACAAGGCCGCGGCGCTGCTCAGGCTCGCCGCCCGCAACGTGCCTGCCGGCTTCGGCGAGAGCTGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS GCA 90 bp | CGCCGATCTCGGCCGCCACTCCGCTCCCTGGGACCGGCTCCGGGCTaGGCGTGGTCCGCTTCCCTGTGGGGGTCGGAGAGAAGAAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RRSRPPLRSLGPAPG*AWSASLWGSERRKS Trigger: ACTCTTTCTTCTCTCCGACCCCCACAGGGAAGCGGACCACGCGCAGCCCGGAGCCGGTCCCAGGGAGCGGAGTGGCGGCCGAGATCGGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031587.13 |
||
| CDS GCA 90 bp | CCTTGCTCGTTCTGCTCCACCCGGGCCTTCTTGGCGGGGCTGGCCTaGCGGGAGTCAGAGTCGGGGTTGGGAGTCAGGCTCCGGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PCSFCSTRAFLAGLA*RESESGLGVRLRSP Trigger: GGGGCTCCGGAGCCTGACTCCCAACCCCGACTCTGACTCCCGGCAGGCCAGCCCCGCCAAGAAGGCCCGGGTGGAGCAGAACGAGCAAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS GCA 90 bp | ATGCGGACGAGCTGCTCGGCGCTGAGCGGCGAGCCTTGCTCGTTCTaGTCCACCCGGGCCTTCTTGGCGGGGCTGGCCTGCCGGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MRTSCSALSGEPCSF*STRAFLAGLACRES Trigger: TGACTCCCGGCAGGCCAGCCCCGCCAAGAAGGCCCGGGTGGAGCAGAACGAGCAAGGCTCGCCGCTCAGCGCCGAGCAGCTCGTCCGCAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS TCA 90 bp | GCGCCGCGGCCTTGTTCCTCTGGATGCGGACGAGCTGCTCGGCGCTaGGCGGCGAGCCTTGCTCGTTCTGCTCCACCCGGGCCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: APRPCSSGCGRAARR*AASLARSAPPGPSW Trigger: CCAAGAAGGCCCGGGTGGAGCAGAACGAGCAAGGCTCGCCGCTCAGCGCCGAGCAGCTCGTCCGCATCCAGAGGAACAAGGCCGCGGCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS GCA 90 bp | TTCCTCTGGATGCGGACGAGCTGCTCGGCGCTGAGCGGCGAGCCTTaGTCGTTCTGCTCCACCCGGGCCTTCTTGGCGGGGCTGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: FLWMRTSCSALSGEP*SFCSTRAFLAGLAT Trigger: CGTGGCCAGCCCCGCCAAGAAGGCCCGGGTGGAGCAGAACGAGCAAGGCTCGCCGCTCAGCGCCGAGCAGCTCGTCCGCATCCAGAGGAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031587.13 |
||
| CDS GCA 90 bp | AGCCTGAGCAGCGCCGCGGCCTTGTTCCTCTGGATGCGGACGAGCTaGTCGGCGCTGAGCGGCGAGCCTTGCTCGTTCTGCTCCACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSSAAALFLWMRTS*SALSGEPCSFCSTR Trigger: CCGGGTGGAGCAGAACGAGCAAGGCTCGCCGCTCAGCGCCGAGCAGCTCGTCCGCATCCAGAGGAACAAGGCCGCGGCGCTGCTCAGGCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS GCA 90 bp | TTCCTCTGGATGCGGACGAGCTGCTCGGCGCTGAGCGGCGAGCCTTaGTCGTTCTGCTCCACCCGGGCCTTCTTGGCGGGGCTGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLWMRTSCSALSGEP*SFCSTRAFLAGLAC Trigger: GCAGGCCAGCCCCGCCAAGAAGGCCCGGGTGGAGCAGAACGAGCAAGGCTCGCCGCTCAGCGCCGAGCAGCTCGTCCGCATCCAGAGGAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS CCA 90 bp | GCGAGCCTTGCTCGTTCTGCTCCACCCGGGCCTTCTTGGCGGGGCTaGCCTGCCGGGAGTCAGAGTCGGGGTTGGGAGTCAGGCTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASLARSAPPGPSWRG*PAGSQSRGWESGSG Trigger: TCCGGAGCCTGACTCCCAACCCCGACTCTGACTCCCGGCAGGCCAGCCCCGCCAAGAAGGCCCGGGTGGAGCAGAACGAGCAAGGCTCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS-3UTR CAA 90 bp | GTGGGCGCGGACAGTGAGGACGGCGTTGAGGAGGAGGACACCTTGTCGGGCCCAAGCAGCGCCGCGGCCTaGTTCCTCTGGATGCGGACG | + |
|
Preference number: 5 (lower is better) Translates to: VGADSEDGVEEEDTLSGPSSAAA*FLWMRT Trigger: CGTCCGCATCCAGAGGAACAAGGCCGCGGCGCTGCT...TGGGCCCGACAAGGTGTCCTCCTCCTCAACGCCGTCCTCACTGTCCGCGCCCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143455.6 |
||
| CDS-3UTR CAA 90 bp | TGCAGATCTTTCCTCCCACCCCAGAGCAGCACACGGGACCGAGGGTGTGTCCGCAGCAGCGCCGCGGCCTaGTTCCTCTGGATGCGGACG | + |
|
Preference number: 5 (lower is better) Translates to: CRSFLPPQSSTRDRGCVRSSAAA*FLWMRT Trigger: CGTCCGCATCCAGAGGAACAAGGCCGCGGCGCTGCT...GCGGACACACCCTCGGTCCCGTGTGCTGCTCTGGGGTGGGAGGAAAGATCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 |
||
| CDS-3UTR CAA 90 bp | GCGGCAGCTGAAAGCACCGCTGTGGACAGATGCGGCCTGTGGGCGGGTGGGCGGGGGTGGAACTGGTCTTaGGACACTGAAGCAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AAAESTAVDRCGLWAGGRGWNWS*DTEAEP Trigger: GGGCTCTGCTTCAGTGTCCAAAGACCAGTTCCACCC...CCGCCCACCCGCCCACAGGCCGCATCTGTCCACAGCGGTGCTTTCAGCTGCCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CAA 90 bp | GCGGCAGCTGAAAGCACCGCTGTGGACAGATGCGGCCTGTGGGCGGGTGGGCGGACAGTGAGGACGGCGTaGAGGAGGAGGACACCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AAAESTAVDRCGLWAGGRTVRTA*RRRTPC Trigger: ACAAGGTGTCCTCCTCCTCAACGCCGTCCTCACTGT...CCGCCCACCCGCCCACAGGCCGCATCTGTCCACAGCGGTGCTTTCAGCTGCCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS GCA 90 bp | ATTAGCTTGACGAAGTACGGCTTCCCGAACTCCCCGCACAGCTGCTaGTTCCAGCTCTCGCCGAAGCCGGCAGGCACGTTGCGGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ISLTKYGFPNSPHSC*FQLSPKPAGTLRAA Trigger: CGCCGCCCGCAACGTGCCTGCCGGCTTCGGCGAGAGCTGGAAGCAGCAGCTGTGCGGGGAGTTCGGGAAGCCGTACTTCGTCAAGCTAAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS GCA 90 bp | CCCATTAGCTTGACGAAGTACGGCTTCCCGAACTCCCCGCACAGCTaGTGCTTCCAGCTCTCGCCGAAGCCGGCAGGCACGTTGCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PISLTKYGFPNSPHS*CFQLSPKPAGTLRA Trigger: CGCCCGCAACGTGCCTGCCGGCTTCGGCGAGAGCTGGAAGCAGCAGCTGTGCGGGGAGTTCGGGAAGCCGTACTTCGTCAAGCTAATGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS CCA 90 bp | CGCTCCCTGGGACCGGCTCCGGGCTGCGCGTGGTCCGCTTCCCTGTaGGGGTCGGAGAGAAGAAAGAGTATAGGGTCTTCTGGCCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: RSLGPAPGCAWSASL*GSERRKSIGSSGRS Trigger: TGATCGGCCAGAAGACCCTATACTCTTTCTTCTCTCCGACCCCCACAGGGAAGCGGACCACGCGCAGCCCGGAGCCGGTCCCAGGGAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031587.13 |
||
| CDS-3UTR CAA 90 bp | TGCAGATCTTTCCTCCCACCCCAGAGCAGCACACGGGACCGAGGGTGTGTCCGCCTCTCCTTATGGGAATaGGCTTGGTGGGCGCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: CRSFLPPQSSTRDRGCVRLSLWE*AWWART Trigger: TGTCCGCGCCCACCAAGCCAATTCCCATAAGGAGAG...GCGGACACACCCTCGGTCCCGTGTGCTGCTCTGGGGTGGGAGGAAAGATCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CAA 90 bp | TATCCCATTCCTGCTTCGCTCAACTTCGGAGCCTGCAAAGGCAAAGGCAAGACGAGCAGCGCCGCGGCCTaGTTCCTCTGGATGCGGACG | + |
|
Preference number: 5 (lower is better) Translates to: YPIPASLNFGACKGKGKTSSAAA*FLWMRT Trigger: CGTCCGCATCCAGAGGAACAAGGCCGCGGCGCTGCT...CGTCTTGCCTTTGCCTTTGCAGGCTCCGAAGTTGAGCGAAGCAGGAATGGGATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 |
||
| CDS-3UTR CAA 90 bp | AAGCGCGGCAGTCTGCTGTCTGCAGAGAGGAGGAAACAACTCCACCGCCACCAGGCAGAGCCCGTGAGCTaGATTAGGTCCGTGATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KRGSLLSAERRKQLHRHQAEPVS*IRSVIG Trigger: CCCTATCACGGACCTAATCAAGCTCACGGGCTCTGC...CTGGTGGCGGTGGAGTTGTTTCCTCCTCTCTGCAGACAGCAGACTGCCGCGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CAA 90 bp | CACCTTGGAGTTAGATCCCCAGCACCACACACACCAAGCGCGGCAGTCTGCTGTCTCTCCTTATGGGAATaGGCTTGGTGGGCGCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: HLGVRSPAPHTPSAAVCCLSLWE*AWWART Trigger: TGTCCGCGCCCACCAAGCCAATTCCCATAAGGAGAG...ACAGCAGACTGCCGCGCTTGGTGTGTGTGGTGCTGGGGATCTAACTCCAAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CAA 90 bp | CATTCCTGCTTCGCTCAACTTCGGAGCCTGCAAAGGCAAAGGCAAGACGCAGGGACAGTGAGGACGGCGTaGAGGAGGAGGACACCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HSCFAQLRSLQRQRQDAGTVRTA*RRRTPC Trigger: ACAAGGTGTCCTCCTCCTCAACGCCGTCCTCACTGT...CCCTGCGTCTTGCCTTTGCCTTTGCAGGCTCCGAAGTTGAGCGAAGCAGGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAACTGCTGGTCCAAAGGTGCAGATCTTTCCTCCCACCCCAGAGCAGCACAGCAGAGCCCGTGAGCTaGATTAGGTCCGTGATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TKLLVQRCRSFLPPQSSTAEPVS*IRSVIG Trigger: CCCTATCACGGACCTAATCAAGCTCACGGGCTCTGC...TGTGCTGCTCTGGGGTGGGAGGAAAGATCTGCACCTTTGGACCAGCAGTTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCCCCTAAGAAACAGCACCTTGGAGTTAGATCCCCAGCACCACACACACCAGGGTGGAACTGGTCTTaGGACACTGAAGCAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SAPKKQHLGVRSPAPHTPGWNWS*DTEAEP Trigger: GGGCTCTGCTTCAGTGTCCAAAGACCAGTTCCACCC...TGGTGTGTGTGGTGCTGGGGATCTAACTCCAAGGTGCTGTTTCTTAGGGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAACCCCGCCCCCTTTGTGATCAGGAAGCTCATTCAGTTGTAAGCCAGACTCTCTCCTTATGGGAATaGGCTTGGTGGGCGCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GEPRPLCDQEAHSVVSQTLSLWE*AWWART Trigger: TGTCCGCGCCCACCAAGCCAATTCCCATAAGGAGAG...AGTCTGGCTTACAACTGAATGAGCTTCCTGATCACAAAGGGGGCGGGGTTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CAA 90 bp | AACTCAGCCCCTAAGAAACAGCACCTTGGAGTTAGATCCCCAGCACCACACACAGGGTGGAACTGGTCTTaGGACACTGAAGCAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NSAPKKQHLGVRSPAPHTGWNWS*DTEAEP Trigger: GGGCTCTGCTTCAGTGTCCAAAGACCAGTTCCACCC...TGTGTGTGGTGCTGGGGATCTAACTCCAAGGTGCTGTTTCTTAGGGGCTGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CAA 90 bp | AACTCAGCCCCTAAGAAACAGCACCTTGGAGTTAGATCCCCAGCACCACACACAACAGTGAGGACGGCGTaGAGGAGGAGGACACCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: NSAPKKQHLGVRSPAPHTTVRTA*RRRTPC Trigger: ACAAGGTGTCCTCCTCCTCAACGCCGTCCTCACTGT...TGTGTGTGGTGCTGGGGATCTAACTCCAAGGTGCTGTTTCTTAGGGGCTGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAACTGCTGGTCCAAAGGTGCAGATCTTTCCTCCCACCCCAGAGCAGCACACAGTTGATGGGCTTCTaGCCAGACTTCTGGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TKLLVQRCRSFLPPQSSTQLMGF*PDFWSS Trigger: ACTGCTCCAGAAGTCTGGCAAGAAGCCCATCAACTG...TGTGCTGCTCTGGGGTGGGAGGAAAGATCTGCACCTTTGGACCAGCAGTTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CAA 90 bp | TATCCCATTCCTGCTTCGCTCAACTTCGGAGCCTGCAAAGGCAAAGGCAAGACGCAGTTGATGGGCTTCTaGCCAGACTTCTGGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: YPIPASLNFGACKGKGKTQLMGF*PDFWSS Trigger: ACTGCTCCAGAAGTCTGGCAAGAAGCCCATCAACTG...CGTCTTGCCTTTGCCTTTGCAGGCTCCGAAGTTGAGCGAAGCAGGAATGGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTGGACTCACGGAATCCAGCTTGTAAACTCAGTGAAGATTGTCTTTCAGAACAGTTGATGGGCTTCTaGCCAGACTTCTGGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QLDSRNPACKLSEDCLSEQLMGF*PDFWSS Trigger: ACTGCTCCAGAAGTCTGGCAAGAAGCCCATCAACTG...TTCTGAAAGACAATCTTCACTGAGTTTACAAGCTGGATTCCGTGAGTCCAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000112275.8 |
||
| CDS CAA 90 bp | CCGGCAGGCACGTTGCGGGCGGCGAGCCTGAGCAGCGCCGCGGCCTaGTTCCTCTGGATGCGGACGAGCTGCTCGGCGCTGAGCGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: PAGTLRAASLSSAAA*FLWMRTSCSALSGE Trigger: CTCGCCGCTCAGCGCCGAGCAGCTCGTCCGCATCCAGAGGAACAAGGCCGCGGCGCTGCTCAGGCTCGCCGCCCGCAACGTGCCTGCCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS TCA 72 bp | CGCCGAAGCCGGCAGGCACGTTGCGGGCGGCGAGCCTaGGCAGCGCCGCGGCCTTGTTCCTCTGGATGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RRSRQARCGRRA*AAPRPCSSGCG Trigger: TCCGCATCCAGAGGAACAAGGCCGCGGCGCTGCTCAGGCTCGCCGCCCGCAACGTGCCTGCCGGCTTCGGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS CCA 72 bp | GCGGCGAGCCTGAGCAGCGCCGCGGCCTTGTTCCTCTaGATGCGGACGAGCTGCTCGGCGCTGAGCGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: AASLSSAAALFL*MRTSCSALSGE Trigger: CTCGCCGCTCAGCGCCGAGCAGCTCGTCCGCATCCAGAGGAACAAGGCCGCGGCGCTGCTCAGGCTCGCCGC 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS CAA 72 bp | TGCTGCTTCCAGCTCTCGCCGAAGCCGGCAGGCACGTaGCGGGCGGCGAGCCTGAGCAGCGCCGCGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CCFQLSPKPAGT*RAASLSSAAAL Trigger: CAAGGCCGCGGCGCTGCTCAGGCTCGCCGCCCGCAACGTGCCTGCCGGCTTCGGCGAGAGCTGGAAGCAGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS CAA 90 bp | CCGCACAGCTGCTGCTTCCAGCTCTCGCCGAAGCCGGCAGGCACGTaGCGGGCGGCGAGCCTGAGCAGCGCCGCGGCCTTGTTCCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PHSCCFQLSPKPAGT*RAASLSSAAALFLW Trigger: CCAGAGGAACAAGGCCGCGGCGCTGCTCAGGCTCGCCGCCCGCAACGTGCCTGCCGGCTTCGGCGAGAGCTGGAAGCAGCAGCTGTGCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS GCA 72 bp | AGCTGCTCGGCGCTGAGCGGCGAGCCTTGCTCGTTCTaGTCCACCCGGGCCTTCTTGGCGGGGCTGGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: SCSALSGEPCSF*STRAFLAGLAT Trigger: CGTGGCCAGCCCCGCCAAGAAGGCCCGGGTGGAGCAGAACGAGCAAGGCTCGCCGCTCAGCGCCGAGCAGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031587.13 |
||
| CDS GCA 72 bp | AGCTGCTCGGCGCTGAGCGGCGAGCCTTGCTCGTTCTaGTCCACCCGGGCCTTCTTGGCGGGGCTGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SCSALSGEPCSF*STRAFLAGLAC Trigger: GCAGGCCAGCCCCGCCAAGAAGGCCCGGGTGGAGCAGAACGAGCAAGGCTCGCCGCTCAGCGCCGAGCAGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102584.11 ENSMUST00000143455.6 |
||
| CDS CAA 72 bp | ACGTTGCGGGCGGCGAGCCTGAGCAGCGCCGCGGCCTaGTTCCTCTGGATGCGGACGAGCTGCTCGGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: TLRAASLSSAAA*FLWMRTSCSAL Trigger: CAGCGCCGAGCAGCTCGTCCGCATCCAGAGGAACAAGGCCGCGGCGCTGCTCAGGCTCGCCGCCCGCAACGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
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| CDS CAA 72 bp | GGCGAGCCTTGCTCGTTCTGCTCCACCCGGGCCTTCTaGGCGGGGCTGGCCTGCCGGGAGTCAGAGTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: GEPCSFCSTRAF*AGLACRESESG Trigger: CCCCGACTCTGACTCCCGGCAGGCCAGCCCCGCCAAGAAGGCCCGGGTGGAGCAGAACGAGCAAGGCTCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102584.11 ENSMUST00000143455.6 |
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| CDS CCA 72 bp | CCACTCCGCTCCCTGGGACCGGCTCCGGGCTGCGCGTaGTCCGCTTCCCTGTGGGGGTCGGAGAGAAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: PLRSLGPAPGCA*SASLWGSERRK Trigger: CTTTCTTCTCTCCGACCCCCACAGGGAAGCGGACCACGCGCAGCCCGGAGCCGGTCCCAGGGAGCGGAGTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031587.13 |
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| CDS CAA 90 bp | GTTCCTCTGGATGCGGACGAGCTGCTCGGCGCTGAGCGGCGAGCCTaGCTCGTTCTGCTCCACCCGGGCCTTCTTGGCGGGGCTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: VPLDADELLGAERRA*LVLLHPGLLGGAGH Trigger: GTGGCCAGCCCCGCCAAGAAGGCCCGGGTGGAGCAGAACGAGCAAGGCTCGCCGCTCAGCGCCGAGCAGCTCGTCCGCATCCAGAGGAAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031587.13 |
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| CDS CAA 90 bp | GTTCCTCTGGATGCGGACGAGCTGCTCGGCGCTGAGCGGCGAGCCTaGCTCGTTCTGCTCCACCCGGGCCTTCTTGGCGGGGCTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: VPLDADELLGAERRA*LVLLHPGLLGGAGL Trigger: CAGGCCAGCCCCGCCAAGAAGGCCCGGGTGGAGCAGAACGAGCAAGGCTCGCCGCTCAGCGCCGAGCAGCTCGTCCGCATCCAGAGGAAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102584.11 ENSMUST00000143455.6 |
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| CDS GCA 72 bp | AGCGCCGCGGCCTTGTTCCTCTGGATGCGGACGAGCTaGTCGGCGCTGAGCGGCGAGCCTTGCTCGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SAAALFLWMRTS*SALSGEPCSFC Trigger: GCAGAACGAGCAAGGCTCGCCGCTCAGCGCCGAGCAGCTCGTCCGCATCCAGAGGAACAAGGCCGCGGCGCT 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
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| CDS CCA 72 bp | GCTCGTTCTGCTCCACCCGGGCCTTCTTGGCGGGGCTaGCCTGCCGGGAGTCAGAGTCGGGGTTGGGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: ARSAPPGPSWRG*PAGSQSRGWES Trigger: TGACTCCCAACCCCGACTCTGACTCCCGGCAGGCCAGCCCCGCCAAGAAGGCCCGGGTGGAGCAGAACGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102584.11 ENSMUST00000143455.6 |
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| CDS TCA 72 bp | CCTTGTTCCTCTGGATGCGGACGAGCTGCTCGGCGCTaGGCGGCGAGCCTTGCTCGTTCTGCTCCACCCGGG | + |
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Preference number: 6 (lower is better) Translates to: PCSSGCGRAARR*AASLARSAPPG Trigger: CCCGGGTGGAGCAGAACGAGCAAGGCTCGCCGCTCAGCGCCGAGCAGCTCGTCCGCATCCAGAGGAACAAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
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| CDS GCA 72 bp | ACGAAGTACGGCTTCCCGAACTCCCCGCACAGCTGCTaGTTCCAGCTCTCGCCGAAGCCGGCAGGCACGTTG | + |
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Preference number: 6 (lower is better) Translates to: TKYGFPNSPHSC*FQLSPKPAGTL Trigger: CAACGTGCCTGCCGGCTTCGGCGAGAGCTGGAAGCAGCAGCTGTGCGGGGAGTTCGGGAAGCCGTACTTCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
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| CDS GCA 72 bp | TTGACGAAGTACGGCTTCCCGAACTCCCCGCACAGCTaGTGCTTCCAGCTCTCGCCGAAGCCGGCAGGCACG | + |
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Preference number: 6 (lower is better) Translates to: LTKYGFPNSPHS*CFQLSPKPAGT Trigger: CGTGCCTGCCGGCTTCGGCGAGAGCTGGAAGCAGCAGCTGTGCGGGGAGTTCGGGAAGCCGTACTTCGTCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031587.13 ENSMUST00000102584.11 ENSMUST00000143455.6 |
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