Pregenerated sensors for UNCX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029546Ensembl transcript IDs: ENSMUST00000172997.3, ENSMUST00000174792.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCTCTGTCAAGAGCGCCCAGGCCAGGGCCCACTTTGTCCCCTCCTaGAGGGCTTTTCGAGCCTCGGCAGCCTTTCCAGACTGTGCGCCG | + |
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Preference number: 1 (lower is better) Translates to: ASVKSAQARAHFVPS*RAFRASAAFPDCAP Trigger: CGGCGCACAGTCTGGAAAGGCTGCCGAGGCTCGAAAAGCCCTCCAGGAGGGGACAAAGTGGGCCCTGGCCTGGGCGCTCTTGACAGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| 3UTR TCA 90 bp | AATGTCTCTAAGAGCCGATCACCTGATTCGTTGGGAGTCTGGGGCTaGGTGAGTGGGCTCGACTGGCTAAGCGCATCTTCCAGCCGCGGT | + |
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Preference number: 1 (lower is better) Translates to: NVSKSRSPDSLGVWG*VSGLDWLSASSSRG Trigger: ACCGCGGCTGGAAGATGCGCTTAGCCAGTCGAGCCCACTCACTCAGCCCCAGACTCCCAACGAATCAGGTGATCGGCTCTTAGAGACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| 3UTR CAA 90 bp | GATGGGAGAAAGCCTCTGTCAAGAGCGCCCAGGCCAGGGCCCACTTaGTCCCCTCCTGGAGGGCTTTTCGAGCCTCGGCAGCCTTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: DGRKPLSRAPRPGPT*SPPGGLFEPRQPFQ Trigger: CTGGAAAGGCTGCCGAGGCTCGAAAAGCCCTCCAGGAGGGGACAAAGTGGGCCCTGGCCTGGGCGCTCTTGACAGAGGCTTTCTCCCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| 3UTR-3UTR TCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTTTGGGAGTCTGGGGCTaGGTGAGTGGGCTCGACTGG | + |
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Preference number: 2 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFLGVWG*VSGLDW Trigger: CCAGTCGAGCCCACTCACTCAGCCCCAGACTCCCAA...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| 3UTR CCA 72 bp | CTTCCCCGAATCGAACGCAGTCACTGCAGTGGCTACTaGGGCGCCACCAGGATCTCTCCCCAATCACCTCGG | + |
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Preference number: 3 (lower is better) Translates to: LPRIERSHCSGY*GATRISPQSPR Trigger: CCGAGGTGATTGGGGAGAGATCCTGGTGGCGCCCCAGTAGCCACTGCAGTGACTGCGTTCGATTCGGGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| 3UTR TCA 72 bp | AAGAGCCGATCACCTGATTCGTTGGGAGTCTGGGGCTaGGTGAGTGGGCTCGACTGGCTAAGCGCATCTTCC | + |
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Preference number: 3 (lower is better) Translates to: KSRSPDSLGVWG*VSGLDWLSASS Trigger: GGAAGATGCGCTTAGCCAGTCGAGCCCACTCACTCAGCCCCAGACTCCCAACGAATCAGGTGATCGGCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| 3UTR CCA 72 bp | CCAGAAATAAAGCAACAGATCTGTCAGCTTCGAGGATaGGAGAAAGCCTCTGTCAAGAGCGCCCAGGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEIKQQICQLRG*EKASVKSAQAR Trigger: CCTGGCCTGGGCGCTCTTGACAGAGGCTTTCTCCCATCCTCGAAGCTGACAGATCTGTTGCTTTATTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| CDS-3UTR TCA 90 bp | AGAGCGCCCAGGCCAGGGCCCACTTTGTCCCCTCCTGGAGGGCTTTTCGAGCCTGCCGACTGCAGCTGGTaGCCGGCCAGCTCGTACACG | + |
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Preference number: 4 (lower is better) Translates to: RAPRPGPTLSPPGGLFEPADCSW*PASSYT Trigger: CGTGTACGAGCTGGCCGGTCACCAGCTGCAGTCGGC...AGGCTCGAAAAGCCCTCCAGGAGGGGACAAAGTGGGCCCTGGCCTGGGCGCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| CDS-3UTR GCA 90 bp | GGCTTCCCCGAATCGAACGCAGTCACTGCAGTGGCTACTGGGGCGCCACCAGGAAACTGGGCATGCGGGTaGTCCAGGAGGCGACCGTCC | + |
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Preference number: 4 (lower is better) Translates to: GFPESNAVTAVATGAPPGNWACG*SRRRPS Trigger: GGACGGTCGCCTCCTGGAGCACCCGCATGCCCAGTT...TCCTGGTGGCGCCCCAGTAGCCACTGCAGTGACTGCGTTCGATTCGGGGAAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| CDS-3UTR TCA 90 bp | AATCGAACGCAGTCACTGCAGTGGCTACTGGGGCGCCACCAGGATCTCTCCCCACAGCGCACGAGCCGCTaGGCAGGCCGTCGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: NRTQSLQWLLGRHQDLSPQRTSR*AGRRWR Trigger: TCTCCATCGACGGCCTGCTCAGCGGCTCGTGCGCTG...TGGGGAGAGATCCTGGTGGCGCCCCAGTAGCCACTGCAGTGACTGCGTTCGATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| CDS-3UTR GCA 90 bp | CCACCAGGATCTCTCCCCAATCACCTCGGCACTCTCAAGTTACTCACCTCCAGACACCGAGGCGGCGGCTaGAGCGCACGAGCCGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: PPGSLPNHLGTLKLLTSRHRGGG*SARAAE Trigger: CTCAGCGGCTCGTGCGCTGCAGCCGCCGCCTCGGTG...TCTGGAGGTGAGTAACTTGAGAGTGCCGAGGTGATTGGGGAGAGATCCTGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| CDS-3UTR CCA 90 bp | CAGCTTCGAGGATGGGAGAAAGCCTCTGTCAAGAGCGCCCAGGCCAGGGCCCACGGGGCTCTCCTTGTCTaGATCCCCCGAGTCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: QLRGWEKASVKSAQARAHGALLV*IPRVCK Trigger: CTTGCAGACTCGGGGGATCCAGACAAGGAGAGCCCC...GTGGGCCCTGGCCTGGGCGCTCTTGACAGAGGCTTTCTCCCATCCTCGAAGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| CDS-3UTR CCA 90 bp | GGCTTCCCCGAATCGAACGCAGTCACTGCAGTGGCTACTGGGGCGCCACCAGGACACTTAGAACAAAGGTaGCCCTGCCTCACCGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: GFPESNAVTAVATGAPPGHLEQR*PCLTAL Trigger: GAGCGCGGTGAGGCAGGGCCACCTTTGTTCTAAGTG...TCCTGGTGGCGCCCCAGTAGCCACTGCAGTGACTGCGTTCGATTCGGGGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| CDS-3UTR CCA 90 bp | CCACCAGGATCTCTCCCCAATCACCTCGGCACTCTCAAGTTACTCACCTCCAGAAGCGAGCCCCCGAACTaGGCATGCGGGTGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PPGSLPNHLGTLKLLTSRSEPPN*ACGCSR Trigger: CCTGGAGCACCCGCATGCCCAGTTCGGGGGCTCGCT...TCTGGAGGTGAGTAACTTGAGAGTGCCGAGGTGATTGGGGAGAGATCCTGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| CDS-3UTR TCA 90 bp | CGAATCGAACGCAGTCACTGCAGTGGCTACTGGGGCGCCACCAGGATCTCTCCCGGTAGTGGCTCTCATTaGACGCCTTCTCCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RIERSHCSGYWGATRISPGSGSH*TPSPAP Trigger: AGGAGCTGGAGAAGGCGTTCAATGAGAGCCACTACC...GGGAGAGATCCTGGTGGCGCCCCAGTAGCCACTGCAGTGACTGCGTTCGATTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| CDS-3UTR TCA 90 bp | CGAATCGAACGCAGTCACTGCAGTGGCTACTGGGGCGCCACCAGGATCTCTCCCACACCAATCTTTACCTaGACTCGGGACTCGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: RIERSHCSGYWGATRISPTPIFT*TRDSTR Trigger: CCTGGTCGAGTCCCGAGTTCAGGTAAAGATTGGTGT...GGGAGAGATCCTGGTGGCGCCCCAGTAGCCACTGCAGTGACTGCGTTCGATTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| CDS-3UTR GCA 90 bp | CCACCAGGATCTCTCCCCAATCACCTCGGCACTCTCAAGTTACTCACCTCCAGAGAACAAAGGTGGCCCTaGCTCACCGCGCTCTGCACG | + |
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Preference number: 4 (lower is better) Translates to: PPGSLPNHLGTLKLLTSREQRWP*LTALCT Trigger: CGTGCAGAGCGCGGTGAGGCAGGGCCACCTTTGTTC...TCTGGAGGTGAGTAACTTGAGAGTGCCGAGGTGATTGGGGAGAGATCCTGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| CDS-3UTR TCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGCAGCGGCGTGGGGTTaGCCACCGAGGCGGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFAAAWG*PPRRRL Trigger: CAGCCGCCGCCTCGGTGGTCAACCCCACGCCGCTGC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR TCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTACGGCAGCCCCGGCGTaGAGTCCAGCCCCGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFTAAPA*SPAPQW Trigger: CCACTGCGGGGCTGGACTTCACGCCGGGGCTGCCGT...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR GCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTCACCGAGGCGGCGGCTaGAGCGCACGAGCCGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFHRGGG*SARAAE Trigger: CTCAGCGGCTCGTGCGCTGCAGCCGCCGCCTCGGTG...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR GCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGAGCTGGGCGCGCTGTaGAGGGACAGGCCACCGGGC | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFELGAL*RDRPPG Trigger: GCCCGGTGGCCTGTCCCTGCACAGCGCGCCCAGCTC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR GCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTAGGCGGGATCGCAGGTaGCAGGCGCGGGTGGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFRRDRR*QARVAR Trigger: GCGAGCCACCCGCGCCTGGCACCTGCGATCCCGCCT...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR GCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTCTGCACGTGGTCGGGTaGGAGTTGTGGGCCGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFLHVVG*ELWAGR Trigger: CCGGCCGGCCCACAACTCGCACCCGACCACGTGCAG...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR GCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTTGGCTGGGGTGGCTTTaGGGCGCGGTGGCGAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFWLGWL*GAVASR Trigger: CCGACTCGCCACCGCGCCGCAAAGCCACCCCAGCCA...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR CCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTCGGTGGCGGCTCGGGTaGCTCTGGAGACAGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFRWRLG*LWRQAS Trigger: GGAGGCCTGTCTCCAGAGCCACCCGAGCCGCCACCG...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR TCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGCCGACTGCAGCTGGTaGCCGGCCAGCTCGTACACG | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFADCSW*PASSYT Trigger: CGTGTACGAGCTGGCCGGTCACCAGCTGCAGTCGGC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR TCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTCAGCGCACGAGCCGCTaGGCAGGCCGTCGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFQRTSR*AGRRWR Trigger: TCTCCATCGACGGCCTGCTCAGCGGCTCGTGCGCTG...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR GCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTCCATGGGCTCCCCGCTaGACGTGGTCGGGTGCGAGT | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFPWAPR*TWSGAS Trigger: ACTCGCACCCGACCACGTGCAGCGGGGAGCCCATGG...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR GCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGCGATGCCAGAGCCGTaGGCTCCAGGACCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFAMPEP*APGPLA Trigger: GGCCAAGGGTCCTGGAGCGCACGGCTCTGGCATCGC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR CCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTAGCGAGCCCCCGAACTaGGCATGCGGGTGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFSEPPN*ACGCSR Trigger: CCTGGAGCACCCGCATGCCCAGTTCGGGGGCTCGCT...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR CCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGCTCCCCGCTGCACGTaGTCGGGTGCGAGTTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFAPRCT*SGASCG Trigger: CCCACAACTCGCACCCGACCACGTGCAGCGGGGAGC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR GCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTAACTGGGCATGCGGGTaGTCCAGGAGGCGACCGTCC | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFNWACG*SRRRPS Trigger: GGACGGTCGCCTCCTGGAGCACCCGCATGCCCAGTT...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR GCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTAATCAGGGTCCGAGGTaGACACGGCAGCCCCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFNQGPR*TRQPRR Trigger: ACGCCGGGGCTGCCGTGTGCACCTCGGACCCTGATT...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR CCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTTCTCCTCTGGGTCCATaGGCTCCCCGCTGCACGTGG | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFSPLGP*APRCTW Trigger: CCACGTGCAGCGGGGAGCCCATGGACCCAGAGGAGA...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR CCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGCGAGCGATCTCCTCTaGGTCCATGGGCTCCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFASDLL*VHGLPA Trigger: AGCGGGGAGCCCATGGACCCAGAGGAGATCGCTCGC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR CCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTTGTCGCTGTCGGAGCTaGGCGCGCTGTGCAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFCRCRS*ARCAGT Trigger: TGTCCCTGCACAGCGCGCCCAGCTCCGACAGCGACA...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR GCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGGGTGCGTCTCCGTTTaGAGCCGGGGCTCTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFGCVSV*SRGSPC Trigger: ACAAGGAGAGCCCCGGCTGCAAACGGAGACGCACCC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR CCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGGGGCTCTCCTTGTCTaGATCCCCCGAGTCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFGALLV*IPRVCK Trigger: CTTGCAGACTCGGGGGATCCAGACAAGGAGAGCCCC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR GCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGCAAGAAGTGGCCCTTaGCAATCAGGGTCCGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFARSGP*QSGSEV Trigger: CACCTCGGACCCTGATTGGCAAGGGCCACTTCTTGC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR TCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGGTAGTGGCTCTCATTaGACGCCTTCTCCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFGSGSH*TPSPAP Trigger: AGGAGCTGGAGAAGGCGTTCAATGAGAGCCACTACC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR TCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTTTTTGGAACCAGACCTaGACTCGGGACTCGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFFWNQT*TRDSTR Trigger: CCTGGTCGAGTCCCGAGTTCAGGTCTGGTTCCAAAA...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 43% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR TCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTTGCAGGTGGCGGCTCTaGCTCTTGAGCAGTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFCRWRL*LLSSFF Trigger: GAAGAAACTGCTCAAGAGTCAGAGCCGCCACCTGCA...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR TCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGGCGGCTCTGACTCTTaGGCAGTTTCTTCTCGTGTT | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFGGSDS*AVSSRV Trigger: AACACGAGAAGAAACTGCTCAAGAGTCAGAGCCGCC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR GCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTTCTTCTCCAGTTCCTTaGGAGCGATCTCCTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFSSPVP*ERSPLG Trigger: ACCCAGAGGAGATCGCTCGCAAGGAACTGGAGAAGA...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR CCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGGCCAGGGCCCTTTTTaGTGTTCTCCTTCTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFGQGPF*CSPSFS Trigger: GGAGAAAGAAGGAGAACACCAAAAAGGGCCCTGGCC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR GCA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGTTTCTTCTCGTGTTTaGGTTTCTTCTTCTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFVSSRV*VSSSPS Trigger: AGATGGAGAAGAAGAAACGCAAACACGAGAAGAAAC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS CCA 90 bp | GCTGGGTCCCGTAGCAGCGCCCGGCTCAGCGGCGCCGCAAGTGGCTaGCTCCCCGGGTGGGCTGGGGGCTCTAGGGCCCGGGCCAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: AGSRSSARLSGAASG*LPGWAGGSRARARR Trigger: TCGCCTGGCCCGGGCCCTAGAGCCCCCAGCCCACCCGGGGAGCCAGCCACTTGCGGCGCCGCTGAGCCGGGCGCTGCTACGGGACCCAGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS CCA 90 bp | AGCAGCGCCCGGCTCAGCGGCGCCGCAAGTGGCTGGCTCCCCGGGTaGGCTGGGGGCTCTAGGGCCCGGGCCAGGCGACGTTTCGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSARLSGAASGWLPG*AGGSRARARRRFER Trigger: CCTCTCGAAACGTCGCCTGGCCCGGGCCCTAGAGCCCCCAGCCCACCCGGGGAGCCAGCCACTTGCGGCGCCGCTGAGCCGGGCGCTGCT 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS GCA 90 bp | GGCAGCCGGCAGCAGCGGCGTGGGGTTGACCACCGAGGCGGCGGCTaGAGCGCACGAGCCGCTGAGCAGGCCGTCGATGGAGAAGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSRQQRRGVDHRGGG*SARAAEQAVDGEGH Trigger: GTGCCCTTCTCCATCGACGGCCTGCTCAGCGGCTCGTGCGCTGCAGCCGCCGCCTCGGTGGTCAACCCCACGCCGCTGCTGCCGGCTGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172997.3 ENSMUST00000174792.2 |
||
| CDS CCA 90 bp | GTGGCTCTGGAGACAGGCCTCCGCCACCGCTGTCGCTGTCGGAGCTaGGCGCGCTGTGCAGGGACAGGCCACCGGGCGAGTGCAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VALETGLRHRCRCRS*ARCAGTGHRASAGG Trigger: GCCACCTGCACTCGCCCGGTGGCCTGTCCCTGCACAGCGCGCCCAGCTCCGACAGCGACAGCGGTGGCGGAGGCCTGTCTCCAGAGCCAC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS GCA 90 bp | AGCCGGCGCCGCTTCTTTGGCTCGGGTAGAAGGCGGGATCGCAGGTaGCAGGCGCGGGTGGCTCGCCAGGAGGTACCGGAGCGGAACCCG | + |
|
Preference number: 5 (lower is better) Translates to: SRRRFFGSGRRRDRR*QARVARQEVPERNP Trigger: CGGGTTCCGCTCCGGTACCTCCTGGCGAGCCACCCGCGCCTGGCACCTGCGATCCCGCCTTCTACCCGAGCCAAAGAAGCGGCGCCGGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS GCA 90 bp | CCAGTTCCTTGCGAGCGATCTCCTCTGGGTCCATGGGCTCCCCGCTaGACGTGGTCGGGTGCGAGTTGTGGGCCGGCCGGCCAGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PVPCERSPLGPWAPR*TWSGASCGPAGQGP Trigger: AGGGCCCTGGCCGGCCGGCCCACAACTCGCACCCGACCACGTGCAGCGGGGAGCCCATGGACCCAGAGGAGATCGCTCGCAAGGAACTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS CCA 90 bp | CCCCGCAGTGGCCGCAGCGTTGGCTGGGGTGGCTTTGCGGCGCGGTaGCGAGTCGGACAGCAGGCTCTCCACGCTGAACGGGCTAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PRSGRSVGWGGFAAR*RVGQQALHAERASL Trigger: AAGGCTAGCCCGTTCAGCGTGGAGAGCCTGCTGTCCGACTCGCCACCGCGCCGCAAAGCCACCCCAGCCAACGCTGCGGCCACTGCGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS CCA 90 bp | CCTTGCGAGCGATCTCCTCTGGGTCCATGGGCTCCCCGCTGCACGTaGTCGGGTGCGAGTTGTGGGCCGGCCGGCCAGGGCCCTTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PCERSPLGPWAPRCT*SGASCGPAGQGPFW Trigger: CCAAAAAGGGCCCTGGCCGGCCGGCCCACAACTCGCACCCGACCACGTGCAGCGGGGAGCCCATGGACCCAGAGGAGATCGCTCGCAAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS CCA 90 bp | TCTTTGGCTCGGGTAGAAGGCGGGATCGCAGGTGCCAGGCGCGGGTaGCTCGCCAGGAGGTACCGGAGCGGAACCCGCGATGCCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLARVEGGIAGARRG*LARRYRSGTRDARA Trigger: GGCTCTGGCATCGCGGGTTCCGCTCCGGTACCTCCTGGCGAGCCACCCGCGCCTGGCACCTGCGATCCCGCCTTCTACCCGAGCCAAAGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS GCA 90 bp | GCGATCTCCTCTGGGTCCATGGGCTCCCCGCTGCACGTGGTCGGGTaGGAGTTGTGGGCCGGCCGGCCAGGGCCCTTTTTGGTGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AISSGSMGSPLHVVG*ELWAGRPGPFLVFS Trigger: GGAGAACACCAAAAAGGGCCCTGGCCGGCCGGCCCACAACTCGCACCCGACCACGTGCAGCGGGGAGCCCATGGACCCAGAGGAGATCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS-3UTR CAA 90 bp | AACGCAGTCACTGCAGTGGCTACTGGGGCGCCACCAGGATCTCTCCCCAATCACAGCAGCGGCGTGGGGTaGACCACCGAGGCGGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NAVTAVATGAPPGSLPNHSSGVG*TTEAAA Trigger: AGCCGCCGCCTCGGTGGTCAACCCCACGCCGCTGCT...GTGATTGGGGAGAGATCCTGGTGGCGCCCCAGTAGCCACTGCAGTGACTGCGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
||
| CDS CCA 90 bp | GTTGGTGCGGGTGCGTCTCCGTTTGCAGCCGGGGCTCTCCTTGTCTaGATCCCCCGAGTCTGCAAGCTTGAAGGGCTGGCTTTCGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VGAGASPFAAGALLV*IPRVCKLEGLAFAG Trigger: GCCGGCGAAAGCCAGCCCTTCAAGCTTGCAGACTCGGGGGATCCAGACAAGGAGAGCCCCGGCTGCAAACGGAGACGCACCCGCACCAAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172997.3 ENSMUST00000174792.2 |
||
| CDS CCA 90 bp | TCTGGGTCCATGGGCTCCCCGCTGCACGTGGTCGGGTGCGAGTTGTaGGCCGGCCGGCCAGGGCCCTTTTTGGTGTTCTCCTTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGSMGSPLHVVGCEL*AGRPGPFLVFSFFL Trigger: GAGAAAGAAGGAGAACACCAAAAAGGGCCCTGGCCGGCCGGCCCACAACTCGCACCCGACCACGTGCAGCGGGGAGCCCATGGACCCAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS CCA 90 bp | TCTCCATCTTCTCCAGTTCCTTGCGAGCGATCTCCTCTGGGTCCATaGGCTCCCCGCTGCACGTGGTCGGGTGCGAGTTGTGGGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPSSPVPCERSPLGP*APRCTWSGASCGPA Trigger: GGCCGGCCCACAACTCGCACCCGACCACGTGCAGCGGGGAGCCCATGGACCCAGAGGAGATCGCTCGCAAGGAACTGGAGAAGATGGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS-3UTR CAA 90 bp | AGCTTCGAGGATGGGAGAAAGCCTCTGTCAAGAGCGCCCAGGCCAGGGCCCACTCGGGTGCGTCTCCGTTaGCAGCCGGGGCTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFEDGRKPLSRAPRPGPTRVRLR*QPGLSL Trigger: CAAGGAGAGCCCCGGCTGCAAACGGAGACGCACCCG...AGTGGGCCCTGGCCTGGGCGCTCTTGACAGAGGCTTTCTCCCATCCTCGAAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
||
| CDS GCA 90 bp | CCTCCCCGCCACTTAGAACAAAGGTGGCCCTGCCTCACCGCGCTCTaGACGCCTAGTGCGGGATCTCGGACTCCTTGGGCGACACCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PPRHLEQRWPCLTAL*TPSAGSRTPWATPI Trigger: GATTGGTGTCGCCCAAGGAGTCCGAGATCCCGCACTAGGCGTGCAGAGCGCGGTGAGGCAGGGCCACCTTTGTTCTAAGTGGCGGGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
||
| CDS-3UTR CAA 90 bp | CCCGAATCGAACGCAGTCACTGCAGTGGCTACTGGGGCGCCACCAGGATCTCTCCCCGAGTCTGCAAGCTaGAAGGGCTGGCTTTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PESNAVTAVATGAPPGSLPESAS*KGWLSP Trigger: CGGCGAAAGCCAGCCCTTCAAGCTTGCAGACTCGGG...GAGAGATCCTGGTGGCGCCCCAGTAGCCACTGCAGTGACTGCGTTCGATTCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
||
| CDS-3UTR CAA 90 bp | CCCCGAATCGAACGCAGTCACTGCAGTGGCTACTGGGGCGCCACCAGGATCTCTTGCCAGCCGGTAAAGTaGGTGCGGGTGCGTCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PRIERSHCSGYWGATRISCQPVK*VRVRLR Trigger: ACGGAGACGCACCCGCACCAACTTTACCGGCTGGCA...AGAGATCCTGGTGGCGCCCCAGTAGCCACTGCAGTGACTGCGTTCGATTCGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
||
| CDS TCA 90 bp | GCGCTGTGCAGGGACAGGCCACCGGGCGAGTGCAGGTGGCGGCTCTaGCTCTTGAGCAGTTTCTTCTCGTGTTTGCGTTTCTTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALCRDRPPGECRWRL*LLSSFFSCLRFFFS Trigger: GGAGAAGAAGAAACGCAAACACGAGAAGAAACTGCTCAAGAGTCAGAGCCGCCACCTGCACTCGCCCGGTGGCCTGTCCCTGCACAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS-3UTR CAA 90 bp | CCCCGAATCGAACGCAGTCACTGCAGTGGCTACTGGGGCGCCACCAGGATCTCTGGGATCTCGGACTCCTaGGGCGACACCAATCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: PRIERSHCSGYWGATRISGISDS*GDTNLY Trigger: GTAAAGATTGGTGTCGCCCAAGGAGTCCGAGATCCC...AGAGATCCTGGTGGCGCCCCAGTAGCCACTGCAGTGACTGCGTTCGATTCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
||
| CDS CCA 90 bp | TTTCTTCTTCTCCATCTTCTCCAGTTCCTTGCGAGCGATCTCCTCTaGGTCCATGGGCTCCCCGCTGCACGTGGTCGGGTGCGAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLLLHLLQFLASDLL*VHGLPAARGRVRVV Trigger: CACAACTCGCACCCGACCACGTGCAGCGGGGAGCCCATGGACCCAGAGGAGATCGCTCGCAAGGAACTGGAGAAGATGGAGAAGAAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS TCA 90 bp | GCAGGGACAGGCCACCGGGCGAGTGCAGGTGGCGGCTCTGACTCTTaGGCAGTTTCTTCTCGTGTTTGCGTTTCTTCTTCTCCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGTGHRASAGGGSDS*AVSSRVCVSSSPSS Trigger: AGAAGATGGAGAAGAAGAAACGCAAACACGAGAAGAAACTGCTCAAGAGTCAGAGCCGCCACCTGCACTCGCCCGGTGGCCTGTCCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS GCA 90 bp | TCTTCTCGTGTTTGCGTTTCTTCTTCTCCATCTTCTCCAGTTCCTTaGGAGCGATCTCCTCTGGGTCCATGGGCTCCCCGCTGCACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSRVCVSSSPSSPVP*ERSPLGPWAPRCTW Trigger: CCACGTGCAGCGGGGAGCCCATGGACCCAGAGGAGATCGCTCGCAAGGAACTGGAGAAGATGGAGAAGAAGAAACGCAAACACGAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS-3UTR CAA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGTGGTCGGGTGCGAGTaGTGGGCCGGCCGGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFVVGCE*WAGRPG Trigger: CCCTGGCCGGCCGGCCCACAACTCGCACCCGACCAC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS-3UTR CAA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTAGCAGCGGCGTGGGGTaGACCACCGAGGCGGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFSSGVG*TTEAAA Trigger: AGCCGCCGCCTCGGTGGTCAACCCCACGCCGCTGCT...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS-3UTR CAA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGGGCCCGCTCCGCCCTaGAGCGCTGCCTGTGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFGPAPP*SAACGT Trigger: AGTGCCACAGGCAGCGCTCAAGGGCGGAGCGGGCCC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS-3UTR CAA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGCGGGCGGCGCGTCCTaGGGCACCAATTCAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFAGGAS*GTNSGP Trigger: GGGCCCTGAATTGGTGCCCAAGGACGCGCCGCCCGC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS-3UTR CAA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTGCCGGCGCCGCTTCTTaGGCTCGGGTAGAAGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFAGAAS*ARVEGG Trigger: CCCGCCTTCTACCCGAGCCAAAGAAGCGGCGCCGGC...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS-3UTR CAA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTCGGGTGCGTCTCCGTTaGCAGCCGGGGCTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFRVRLR*QPGLSL Trigger: CAAGGAGAGCCCCGGCTGCAAACGGAGACGCACCCG...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS-3UTR CAA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTCAGCCGGGGCTCTCCTaGTCTGGATCCCCCGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFQPGLS*SGSPES Trigger: AGACTCGGGGGATCCAGACAAGGAGAGCCCCGGCTG...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS-3UTR CAA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTCCCGAGTCTGCAAGCTaGAAGGGCTGGCTTTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFPESAS*KGWLSP Trigger: CGGCGAAAGCCAGCCCTTCAAGCTTGCAGACTCGGG...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS-3UTR CAA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTTGCCAGCCGGTAAAGTaGGTGCGGGTGCGTCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFCQPVK*VRVRLR Trigger: ACGGAGACGCACCCGCACCAACTTTACCGGCTGGCA...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS-3UTR CAA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTAGCAAGAAGTGGCCCTaGCCAATCAGGGTCCGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFSKKWP*PIRVRG Trigger: ACCTCGGACCCTGATTGGCAAGGGCCACTTCTTGCT...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS-3UTR CAA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTCGGCCAGGGCCCTTTTaGGTGTTCTCCTTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFRPGPF*VFSFFL Trigger: GAGAAAGAAGGAGAACACCAAAAAGGGCCCTGGCCG...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS-3UTR CAA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTATCTTCTCCAGTTCCTaGCGAGCGATCTCCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFIFSSS*RAISSG Trigger: CCCAGAGGAGATCGCTCGCAAGGAACTGGAGAAGAT...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS-3UTR CAA 90 bp | ATATTCTTAGACATTTTTGCATTTTACAAGGCTGAGGATTCTCGTTGTGGGTTTAGTTTCTTCTCGTGTTaGCGTTTCTTCTTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: IFLDIFAFYKAEDSRCGFSFFSC*RFFFSI Trigger: GATGGAGAAGAAGAAACGCAAACACGAGAAGAAACT...AAACCCACAACGAGAATCCTCAGCCTTGTAAAATGCAAAAATGTCTAAGAATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS CCA 72 bp | CGGCTCAGCGGCGCCGCAAGTGGCTGGCTCCCCGGGTaGGCTGGGGGCTCTAGGGCCCGGGCCAGGCGACGT | + |
|
Preference number: 6 (lower is better) Translates to: RLSGAASGWLPG*AGGSRARARRR Trigger: ACGTCGCCTGGCCCGGGCCCTAGAGCCCCCAGCCCACCCGGGGAGCCAGCCACTTGCGGCGCCGCTGAGCCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS CCA 72 bp | CGTAGCAGCGCCCGGCTCAGCGGCGCCGCAAGTGGCTaGCTCCCCGGGTGGGCTGGGGGCTCTAGGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RSSARLSGAASG*LPGWAGGSRAR Trigger: CCGGGCCCTAGAGCCCCCAGCCCACCCGGGGAGCCAGCCACTTGCGGCGCCGCTGAGCCGGGCGCTGCTACG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS CAA 90 bp | AGGCCCGCAGTCGCCGCCGCTCCAGGCCCGCAAGGGACCGTGTCCTaGTCCGCCGGGCGACCTAGCCGTGGCTGCGAGCCGGCGCCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RPAVAAAPGPQGTVS*SAGRPSRGCEPAPL Trigger: AAGCGGCGCCGGCTCGCAGCCACGGCTAGGTCGCCCGGCGGACAAGGACACGGTCCCTTGCGGGCCTGGAGCGGCGGCGACTGCGGGCCT 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS GCA 72 bp | CCGCCACCGCTGTCGCTGTCGGAGCTGGGCGCGCTGTaGAGGGACAGGCCACCGGGCGAGTGCAGGTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PPPLSLSELGAL*RDRPPGECRWR Trigger: CCGCCACCTGCACTCGCCCGGTGGCCTGTCCCTGCACAGCGCGCCCAGCTCCGACAGCGACAGCGGTGGCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS CAA 72 bp | GTCGCCGCCGCTCCAGGCCCGCAAGGGACCGTGTCCTaGTCCGCCGGGCGACCTAGCCGTGGCTGCGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VAAAPGPQGTVS*SAGRPSRGCEP Trigger: CGGCTCGCAGCCACGGCTAGGTCGCCCGGCGGACAAGGACACGGTCCCTTGCGGGCCTGGAGCGGCGGCGAC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS GCA 72 bp | GAGCGGGTGGCCCGGGAGAGGCAACAACCTCAGGGCTaGGACGGGCGAAGGCCGGGTCCGCAGCGCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: ERVARERQQPQG*DGRRPGPQRHQ Trigger: CTGGTGGCGCTGCGGACCCGGCCTTCGCCCGTCGCAGCCCTGAGGTTGTTGCCTCTCCCGGGCCACCCGCTC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS CAA 72 bp | CCCGGCGTGAAGTCCAGCCCCGCAGTGGCCGCAGCGTaGGCTGGGGTGGCTTTGCGGCGCGGTGGCGAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PGVKSSPAVAAA*AGVALRRGGES Trigger: CGACTCGCCACCGCGCCGCAAAGCCACCCCAGCCAACGCTGCGGCCACTGCGGGGCTGGACTTCACGCCGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS GCA 72 bp | CAGCAGCGGCGTGGGGTTGACCACCGAGGCGGCGGCTaGAGCGCACGAGCCGCTGAGCAGGCCGTCGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: QQRRGVDHRGGG*SARAAEQAVDG Trigger: TCCATCGACGGCCTGCTCAGCGGCTCGTGCGCTGCAGCCGCCGCCTCGGTGGTCAACCCCACGCCGCTGCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172997.3 ENSMUST00000174792.2 |
||
| CDS CCA 72 bp | CGATCTCCTCTGGGTCCATGGGCTCCCCGCTGCACGTaGTCGGGTGCGAGTTGTGGGCCGGCCGGCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSPLGPWAPRCT*SGASCGPAGQG Trigger: GCCCTGGCCGGCCGGCCCACAACTCGCACCCGACCACGTGCAGCGGGGAGCCCATGGACCCAGAGGAGATCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS CCA 72 bp | AGTCCAGCCCCGCAGTGGCCGCAGCGTTGGCTGGGGTaGCTTTGCGGCGCGGTGGCGAGTCGGACAGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPAPQWPQRWLG*LCGAVASRTAG Trigger: GCCTGCTGTCCGACTCGCCACCGCGCCGCAAAGCCACCCCAGCCAACGCTGCGGCCACTGCGGGGCTGGACT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
||
| CDS CAA 72 bp | AGCCCCGCAGTGGCCGCAGCGTTGGCTGGGGTGGCTTaGCGGCGCGGTGGCGAGTCGGACAGCAGGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPAVAAALAGVA*RRGGESDSRLS Trigger: GGAGAGCCTGCTGTCCGACTCGCCACCGCGCCGCAAAGCCACCCCAGCCAACGCTGCGGCCACTGCGGGGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS GCA 72 bp | TGCGAGCGATCTCCTCTGGGTCCATGGGCTCCCCGCTaGACGTGGTCGGGTGCGAGTTGTGGGCCGGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: CERSPLGPWAPR*TWSGASCGPAG Trigger: GCCGGCCGGCCCACAACTCGCACCCGACCACGTGCAGCGGGGAGCCCATGGACCCAGAGGAGATCGCTCGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS CCA 72 bp | GGCCGCAGCGTTGGCTGGGGTGGCTTTGCGGCGCGGTaGCGAGTCGGACAGCAGGCTCTCCACGCTGAACGG | + |
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Preference number: 6 (lower is better) Translates to: GRSVGWGGFAAR*RVGQQALHAER Trigger: CCGTTCAGCGTGGAGAGCCTGCTGTCCGACTCGCCACCGCGCCGCAAAGCCACCCCAGCCAACGCTGCGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS CCA 72 bp | CGTGAAGTCCAGCCCCGCAGTGGCCGCAGCGTTGGCTaGGGTGGCTTTGCGGCGCGGTGGCGAGTCGGACAG | + |
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Preference number: 6 (lower is better) Translates to: REVQPRSGRSVG*GGFAARWRVGQ Trigger: CTGTCCGACTCGCCACCGCGCCGCAAAGCCACCCCAGCCAACGCTGCGGCCACTGCGGGGCTGGACTTCACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS GCA 72 bp | TCTGGGTCCATGGGCTCCCCGCTGCACGTGGTCGGGTaGGAGTTGTGGGCCGGCCGGCCAGGGCCCTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: SGSMGSPLHVVG*ELWAGRPGPFL Trigger: CAAAAAGGGCCCTGGCCGGCCGGCCCACAACTCGCACCCGACCACGTGCAGCGGGGAGCCCATGGACCCAGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS CAA 90 bp | GTGAAGTCCAGCCCCGCAGTGGCCGCAGCGTTGGCTGGGGTGGCTTaGCGGCGCGGTGGCGAGTCGGACAGCAGGCTCTCCACGCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: VKSSPAVAAALAGVA*RRGGESDSRLSTLN Trigger: GTTCAGCGTGGAGAGCCTGCTGTCCGACTCGCCACCGCGCCGCAAAGCCACCCCAGCCAACGCTGCGGCCACTGCGGGGCTGGACTTCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS CCA 72 bp | ATGGGCTCCCCGCTGCACGTGGTCGGGTGCGAGTTGTaGGCCGGCCGGCCAGGGCCCTTTTTGGTGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: MGSPLHVVGCEL*AGRPGPFLVFS Trigger: GGAGAACACCAAAAAGGGCCCTGGCCGGCCGGCCCACAACTCGCACCCGACCACGTGCAGCGGGGAGCCCAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS CAA 72 bp | TCCATGGGCTCCCCGCTGCACGTGGTCGGGTGCGAGTaGTGGGCCGGCCGGCCAGGGCCCTTTTTGGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SMGSPLHVVGCE*WAGRPGPFLVF Trigger: GAACACCAAAAAGGGCCCTGGCCGGCCGGCCCACAACTCGCACCCGACCACGTGCAGCGGGGAGCCCATGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS GCA 72 bp | GCAGCCGGGGCTCTCCTTGTCTGGATCCCCCGAGTCTaGAAGCTTGAAGGGCTGGCTTTCGCCGGCCACCCC | + |
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Preference number: 6 (lower is better) Translates to: AAGALLVWIPRV*KLEGLAFAGHP Trigger: GGGGTGGCCGGCGAAAGCCAGCCCTTCAAGCTTGCAGACTCGGGGGATCCAGACAAGGAGAGCCCCGGCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172997.3 ENSMUST00000174792.2 |
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| CDS GCA 72 bp | GAGCAAGAAGTGGCCCTTGCCAATCAGGGTCCGAGGTaGACACGGCAGCCCCGGCGTGAAGTCCAGCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: EQEVALANQGPR*TRQPRREVQPR Trigger: GCGGGGCTGGACTTCACGCCGGGGCTGCCGTGTGCACCTCGGACCCTGATTGGCAAGGGCCACTTCTTGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS CCA 72 bp | TTGTCTGGATCCCCCGAGTCTGCAAGCTTGAAGGGCTaGCTTTCGCCGGCCACCCCGCAGGCAGCCGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LSGSPESASLKG*LSPATPQAAGS Trigger: GCTGCCGGCTGCCTGCGGGGTGGCCGGCGAAAGCCAGCCCTTCAAGCTTGCAGACTCGGGGGATCCAGACAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172997.3 ENSMUST00000174792.2 |
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| CDS TCA 72 bp | CGTCCTTGGGCACCAATTCAGGGCCCGCTCCGCCCTTaGGCGCTGCCTGTGGCACTAGGAAACCCAGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RPWAPIQGPLRP*ALPVALGNPGA Trigger: AGCCCCTGGGTTTCCTAGTGCCACAGGCAGCGCTCAAGGGCGGAGCGGGCCCTGAATTGGTGCCCAAGGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS CAA 90 bp | TCCTCTGGGTCCATGGGCTCCCCGCTGCACGTGGTCGGGTGCGAGTaGTGGGCCGGCCGGCCAGGGCCCTTTTTGGTGTTCTCCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SSGSMGSPLHVVGCE*WAGRPGPFLVFSFF Trigger: AAAGAAGGAGAACACCAAAAAGGGCCCTGGCCGGCCGGCCCACAACTCGCACCCGACCACGTGCAGCGGGGAGCCCATGGACCCAGAGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS CAA 72 bp | TGCCAGCCGGTAAAGTTGGTGCGGGTGCGTCTCCGTTaGCAGCCGGGGCTCTCCTTGTCTGGATCCCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: CQPVKLVRVRLR*QPGLSLSGSPE Trigger: CTCGGGGGATCCAGACAAGGAGAGCCCCGGCTGCAAACGGAGACGCACCCGCACCAACTTTACCGGCTGGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172997.3 ENSMUST00000174792.2 |
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| CDS GCA 72 bp | CACTTAGAACAAAGGTGGCCCTGCCTCACCGCGCTCTaGACGCCTAGTGCGGGATCTCGGACTCCTTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: HLEQRWPCLTAL*TPSAGSRTPWA Trigger: CGCCCAAGGAGTCCGAGATCCCGCACTAGGCGTGCAGAGCGCGGTGAGGCAGGGCCACCTTTGTTCTAAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| CDS CCA 72 bp | GGTGCGTCTCCGTTTGCAGCCGGGGCTCTCCTTGTCTaGATCCCCCGAGTCTGCAAGCTTGAAGGGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: GASPFAAGALLV*IPRVCKLEGLA Trigger: AGCCAGCCCTTCAAGCTTGCAGACTCGGGGGATCCAGACAAGGAGAGCCCCGGCTGCAAACGGAGACGCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172997.3 ENSMUST00000174792.2 |
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| CDS CCA 72 bp | AGCCTGAAACCACCTCCCCGCCACTTAGAACAAAGGTaGCCCTGCCTCACCGCGCTCTGCACGCCTAGTGCG | + |
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Preference number: 6 (lower is better) Translates to: SLKPPPRHLEQR*PCLTALCTPSA Trigger: CGCACTAGGCGTGCAGAGCGCGGTGAGGCAGGGCCACCTTTGTTCTAAGTGGCGGGGAGGTGGTTTCAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| CDS CCA 72 bp | TCTCCAGTTCCTTGCGAGCGATCTCCTCTGGGTCCATaGGCTCCCCGCTGCACGTGGTCGGGTGCGAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SPVPCERSPLGP*APRCTWSGASC Trigger: ACAACTCGCACCCGACCACGTGCAGCGGGGAGCCCATGGACCCAGAGGAGATCGCTCGCAAGGAACTGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS CCA 72 bp | CTCCATCTTCTCCAGTTCCTTGCGAGCGATCTCCTCTaGGTCCATGGGCTCCCCGCTGCACGTGGTCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LHLLQFLASDLL*VHGLPAARGRV Trigger: CACCCGACCACGTGCAGCGGGGAGCCCATGGACCCAGAGGAGATCGCTCGCAAGGAACTGGAGAAGATGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS TCA 72 bp | GGATCTCGGACTCCTTGGGCGACACCAATCTTTACCTaGACTCGGGACTCGACCAGGTCCAGGCGCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: GSRTPWATPIFT*TRDSTRSRRSA Trigger: GGCGCTGCGCCTGGACCTGGTCGAGTCCCGAGTTCAGGTAAAGATTGGTGTCGCCCAAGGAGTCCGAGATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174792.2 |
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| CDS CAA 90 bp | GTAAAGTTGGTGCGGGTGCGTCTCCGTTTGCAGCCGGGGCTCTCCTaGTCTGGATCCCCCGAGTCTGCAAGCTTGAAGGGCTGGCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: VKLVRVRLRLQPGLS*SGSPESASLKGWLS Trigger: CGAAAGCCAGCCCTTCAAGCTTGCAGACTCGGGGGATCCAGACAAGGAGAGCCCCGGCTGCAAACGGAGACGCACCCGCACCAACTTTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172997.3 ENSMUST00000174792.2 |
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| CDS TCA 72 bp | AGGGACAGGCCACCGGGCGAGTGCAGGTGGCGGCTCTaGCTCTTGAGCAGTTTCTTCTCGTGTTTGCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: RDRPPGECRWRL*LLSSFFSCLRF Trigger: GAAACGCAAACACGAGAAGAAACTGCTCAAGAGTCAGAGCCGCCACCTGCACTCGCCCGGTGGCCTGTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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| CDS CAA 90 bp | TTCTTCTCGTGTTTGCGTTTCTTCTTCTCCATCTTCTCCAGTTCCTaGCGAGCGATCTCCTCTGGGTCCATGGGCTCCCCGCTGCACGTG | + |
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Preference number: 6 (lower is better) Translates to: FFSCLRFFFSIFSSS*RAISSGSMGSPLHV Trigger: CACGTGCAGCGGGGAGCCCATGGACCCAGAGGAGATCGCTCGCAAGGAACTGGAGAAGATGGAGAAGAAGAAACGCAAACACGAGAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172997.3 |
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