RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UNC93A2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056133

Ensembl transcript IDs: ENSMUST00000070059.5, ENSMUST00000231922.2

Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCCATGGTGGTGAGGTAGGTACCCTGAGCCGACCACAGAGGGGCTaGACCCAGGCCCAGCAAGATGGAGGTAGGGATCAGGGTGTACCT +
Preference number: 1 (lower is better)
Translates to: SHGGEVGTLSRPQRG*TQAQQDGGRDQGVP
Trigger: AGGTACACCCTGATCCCTACCTCCATCTTGCTGGGCCTGGGTGCAGCCCCTCTGTGGTCGGCTCAGGGTACCTACCTCACCACCATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231922.2
3UTR CCA 90 bp GAAACAGTTGTGGAGGGTCGAGTCTATCGCCTGAGCGCTGCTACGTaGACCGCCTCTGCTGACCCAGGCTGGGTTCTCAGCCATCACTTG +
Preference number: 1 (lower is better)
Translates to: ETVVEGRVYRLSAAT*TASADPGWVLSHHL
Trigger: CAAGTGATGGCTGAGAACCCAGCCTGGGTCAGCAGAGGCGGTCCACGTAGCAGCGCTCAGGCGATAGACTCGACCCTCCACAACTGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070059.5
ENSMUST00000231922.2
3UTR GCA 90 bp GTCCTGGCCCTCCTGGCTACTAGCCAATGGCTCCACGGATCTTTCTaGCTCTGCCTCTGCCTCTGCCTCCCCAGTACAGGAATTATACAT +
Preference number: 1 (lower is better)
Translates to: VLALLATSQWLHGSF*LCLCLCLPSTGIIH
Trigger: ATGTATAATTCCTGTACTGGGGAGGCAGAGGCAGAGGCAGAGGCAGAAAGATCCGTGGAGCCATTGGCTAGTAGCCAGGAGGGCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
3UTR GCA 90 bp TGGGTTGAGGGTTCAAACTGGGGTCCTCGTGCTCAGCCTAGAAAGTaGTTTAATGACAGAGCCACTTCCTCCACCCCAGTACCTAGCTAC +
Preference number: 1 (lower is better)
Translates to: WVEGSNWGPRAQPRK*FNDRATSSTPVPSY
Trigger: GTAGCTAGGTACTGGGGTGGAGGAAGTGGCTCTGTCATTAAAGCACTTTCTAGGCTGAGCACGAGGACCCCAGTTTGAACCCTCAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
3UTR CAA 90 bp GACAGAGCCACTTCCTCCACCCCAGTACCTAGCTACGGCTTCCTTTaGGTAGTGTTGTGGGCTGATCGTGTGGCCTTGTGTTTGCTAAGG +
Preference number: 2 (lower is better)
Translates to: DRATSSTPVPSYGFL*VVLWADRVALCLLR
Trigger: CCTTAGCAAACACAAGGCCACACGATCAGCCCACAACACTACCAAAAGGAAGCCGTAGCTAGGTACTGGGGTGGAGGAAGTGGCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
3UTR CAA 90 bp ATACTGGTTCACCACATCTTTGCCAAGCTTCCCCACCTTTTCCGCTaGCAGATTTCCCATGGTGGTGAGGTAGGTACCCTGAGCCGACCA +
Preference number: 2 (lower is better)
Translates to: ILVHHIFAKLPHLFR*QISHGGEVGTLSRP
Trigger: TGGTCGGCTCAGGGTACCTACCTCACCACCATGGGAAATCTGCAAGCGGAAAAGGTGGGGAAGCTTGGCAAAGATGTGGTGAACCAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231922.2
3UTR-3UTR GCA 90 bp ATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGCTCTGCCTCTGCCTCTaGCTCCCCAGTACAGGAATT +
Preference number: 2 (lower is better)
Translates to: MCPWLLLTLVLGTKISGLLCLCL*LPSTGI
Trigger: AATTCCTGTACTGGGGAGGCAGAGGCAGAGGCAGAG...CAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
3UTR-3UTR TCA 90 bp GTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGAAGGTAGTGTTGTGGGCTaGTCGTGTGGCCTTGTGTTT +
Preference number: 2 (lower is better)
Translates to: VSLVATNLSSWDQDLGTEGSVVG*SCGLVF
Trigger: AAACACAAGGCCACACGATCAGCCCACAACACTACC...TTCAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
3UTR-3UTR GCA 90 bp TTCCTCTTCTGCCTGGTTTTTCTTTTCTGCACCAAGGACCTTGGAAGCAGCCAGGGATCAGGGTGTACCTaGAGAAAGACCCAGCAAAGA +
Preference number: 2 (lower is better)
Translates to: FLFCLVFLFCTKDLGSSQGSGCT*RKTQQR
Trigger: TCTTTGCTGGGTCTTTCTGCAGGTACACCCTGATCC...CTGGCTGCTTCCAAGGTCCTTGGTGCAGAAAAGAAAAACCAGGCAGAAGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000231922.2
3UTR CAA 90 bp TCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATGTGTCCTaGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACT +
Preference number: 2 (lower is better)
Translates to: SVCLSVCVGGRHYVS*VATNLSSWDQDLGT
Trigger: AGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAATGTCTACCTCCTACACAGACAGACAGACAGACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
3UTR GCA 72 bp GGTGAGGTAGGTACCCTGAGCCGACCACAGAGGGGCTaGACCCAGGCCCAGCAAGATGGAGGTAGGGATCAG +
Preference number: 3 (lower is better)
Translates to: GEVGTLSRPQRG*TQAQQDGGRDQ
Trigger: CTGATCCCTACCTCCATCTTGCTGGGCCTGGGTGCAGCCCCTCTGTGGTCGGCTCAGGGTACCTACCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231922.2
3UTR CCA 72 bp AGCGCTGCTACGTGGACCGCCTCTGCTGACCCAGGCTaGGTTCTCAGCCATCACTTGTCCACATTTACATTT +
Preference number: 3 (lower is better)
Translates to: SAATWTASADPG*VLSHHLSTFTF
Trigger: AAATGTAAATGTGGACAAGTGATGGCTGAGAACCCAGCCTGGGTCAGCAGAGGCGGTCCACGTAGCAGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231922.2
CDS-3UTR GCA 90 bp GTCTATCGCCTGAGCGCTGCTACGTGGACCGCCTCTGCTGACCCAGGCTGGGTTGTGAGGGGTGATGAGTaGTGTTGGTGGCCGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VYRLSAATWTASADPGWVVRGDE*CWWPLD
Trigger: GTCCAGCGGCCACCAACAGCACTCATCACCCCTCAC...AACCCAGCCTGGGTCAGCAGAGGCGGTCCACGTAGCAGCGCTCAGGCGATAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR TCA 90 bp TACTGGTTCACCACATCTTTGCCAAGCTTCCCCACCTTTTCCGCTTGCAGATTTAGACACCCGTGTGTGTaGGGGCAGGGCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: YWFTTSLPSFPTFSACRFRHPCV*GQGPRR
Trigger: TCTCCTGGGGCCCTGCCCTCACACACACGGGTGTCT...AAATCTGCAAGCGGAAAAGGTGGGGAAGCTTGGCAAAGATGTGGTGAACCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000231922.2
CDS-3UTR CCA 90 bp GTCTATCGCCTGAGCGCTGCTACGTGGACCGCCTCTGCTGACCCAGGCTGGGTTCACACTCCAGAAGATTaGAATACCAGGAAAAAGATG +
Preference number: 4 (lower is better)
Translates to: VYRLSAATWTASADPGWVHTPED*NTRKKM
Trigger: CATCTTTTTCCTGGTATTCCAATCTTCTGGAGTGTG...AACCCAGCCTGGGTCAGCAGAGGCGGTCCACGTAGCAGCGCTCAGGCGATAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
3UTR CAA 72 bp ACTTCCTCCACCCCAGTACCTAGCTACGGCTTCCTTTaGGTAGTGTTGTGGGCTGATCGTGTGGCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: TSSTPVPSYGFL*VVLWADRVALC
Trigger: ACACAAGGCCACACGATCAGCCCACAACACTACCAAAAGGAAGCCGTAGCTAGGTACTGGGGTGGAGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp GCCCAGCAAGATGGAGGTAGGGATCAGGGTGTACCTGCAGAAAGACCCAGCAAACTTGATGAGGATAGGTaGGAGGAACATGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: AQQDGGRDQGVPAERPSKLDEDR*EEHGGQ
Trigger: CTGTCCTCCATGTTCCTCCCACCTATCCTCATCAAG...TTTGCTGGGTCTTTCTGCAGGTACACCCTGATCCCTACCTCCATCTTGCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231922.2
CDS-3UTR CCA 90 bp GTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGAAGGACCAAAGAGGTGGTaGTCTGGGCCTCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VSLVATNLSSWDQDLGTEGPKRW*SGPPLS
Trigger: GGAGAGAGGAGGCCCAGACCACCACCTCTTTGGTCC...TTCAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR TCA 90 bp TACTGGTTCACCACATCTTTGCCAAGCTTCCCCACCTTTTCCGCTTGCAGATTTACCCACCCAGGCCAGTaGTTCCCTCTGTCCTACTCT +
Preference number: 4 (lower is better)
Translates to: YWFTTSLPSFPTFSACRFTHPGQ*FPLSYS
Trigger: AGAGTAGGACAGAGGGAATCACTGGCCTGGGTGGGT...AAATCTGCAAGCGGAAAAGGTGGGGAAGCTTGGCAAAGATGTGGTGAACCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231922.2
CDS-3UTR CCA 90 bp TCTTCTGCCTGGTTTTTCTTTTCTGCACCAAGGACCTTGGAAGCAGCCAGGAAAAGGGGCTGTACCAGTTaGCATGGAAGTTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SSAWFFFSAPRTLEAARKRGCTS*HGSCPG
Trigger: CCCTGGGCAACTTCCATGCCAACTGGTACAGCCCCT...TTTCCTGGCTGCTTCCAAGGTCCTTGGTGCAGAAAAGAAAAACCAGGCAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000231922.2
CDS-3UTR CCA 90 bp CATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGTGTGGACCAAAGAGGTaGTGGTCTGGGCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: HYVSLVATNLSSWDQDLGCGPKR*WSGPPL
Trigger: GAGAGGAGGCCCAGACCACCACCTCTTTGGTCCACA...CCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp CATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGTCAGGGTGTACCAGTTaGCATGGAAGTTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: HYVSLVATNLSSWDQDLGSGCTS*HGSCPG
Trigger: CCCTGGGCAACTTCCATGCCAACTGGTACACCCTGA...CCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp ATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGAGCTGTTGGTGGCCGCTaGACCCATCAGGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: IMCPWLLLTLVLGTKISGAVGGR*THQAVF
Trigger: AAAGACTGCCTGATGGGTCCAGCGGCCACCAACAGC...TCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATTCTGGGATGGCCTCTTaGATGGACATCTTGCCGAAC +
Preference number: 4 (lower is better)
Translates to: VCVCVSVCLSVCVGGRHYSGMAS*MDILPN
Trigger: GTTCGGCAAGATGTCCATGCAAGAGGCCATCCCAGA...ATAATGTCTACCTCCTACACAGACAGACAGACAGACAGACACACACACACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp ATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGCTTGATGAGGATAGGTaGGAGGAACATGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: MCPWLLLTLVLGTKISGLLDEDR*EEHGGQ
Trigger: CTGTCCTCCATGTTCCTCCCACCTATCCTCATCAAG...CAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp CATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGGTGTACCAGTTGGCATaGAAGTTGCCCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: HYVSLVATNLSSWDQDLGVYQLA*KLPREK
Trigger: CTTCTCCCTGGGCAACTTCCATGCCAACTGGTACAC...CCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATGCTGTTCCTCTGGGATaGCCTCTTGCATGGACATCT +
Preference number: 4 (lower is better)
Translates to: VCVCVSVCLSVCVGGRHYAVPLG*PLAWTS
Trigger: AGATGTCCATGCAAGAGGCCATCCCAGAGGAACAGC...ATAATGTCTACCTCCTACACAGACAGACAGACAGACAGACACACACACACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp ATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGAAGAAGACAGGCAGTTaGTTGGTGTTTGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: MCPWLLLTLVLGTKISGLKKTGS*LVFGCH
Trigger: GTGGCACCCAAACACCAACCAACTGCCTGTCTTCTT...CAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR TCA 90 bp ATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGAGTAGATCAGCTGCTGTaGGGGGTGATGAGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: IMCPWLLLTLVLGTKISGVDQLL*GVMSAV
Trigger: AACAGCACTCATCACCCCTCACAGCAGCTGATCTAC...TCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR GCA 90 bp TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAACGACCACAGAGGGGCTaGACCCAGGCCCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: YNDSPLRILLISMSRKLERPQRG*TQAQQD
Trigger: ATCTTGCTGGGCCTGGGTGCAGCCCCTCTGTGGTCG...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAACAGCTACCAGCAGGATaGCCAGGACACCACAGCCGG +
Preference number: 4 (lower is better)
Translates to: YNDSPLRILLISMSRKLEQLPAG*PGHHSR
Trigger: CCGGCTGTGGTGTCCTGGCCATCCTGCTGGTAGCTG...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp CATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGAGGTTGACAGTAATGTaGACCAAAGAGGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: HYVSLVATNLSSWDQDLGRLTVM*TKEVVV
Trigger: GACCACCACCTCTTTGGTCCACATTACTGTCAACCT...CCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR GCA 90 bp GACTATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAAGCCCACAAAGTGGATaGCCAGGGCACAGGTCACAT +
Preference number: 4 (lower is better)
Translates to: DYNDSPLRILLISMSRKLSPQSG*PGHRSH
Trigger: ATGTGACCTGTGCCCTGGGCATCCACTTTGTGGGCT...TAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp ATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGAAAACCCACTGTACAGTaGCAGGAACATCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: IMCPWLLLTLVLGTKISGKPTVQ*QEHQET
Trigger: TGTCTCCTGATGTTCCTGCCACTGTACAGTGGGTTT...TCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR TCA 90 bp GACTATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAACAACGCAAGAGAAGTaGATGGCTGCTCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: DYNDSPLRILLISMSRKLTTQEK*MAAPSA
Trigger: TGCACTGGGAGCAGCCATTCACTTCTCTTGCGTTGT...TAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp GACTATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTACCCTGCCCGTGTACTTaGAGATCTTCCCATACAGCA +
Preference number: 4 (lower is better)
Translates to: DYNDSPLRILLISMSRKLPCPCT*RSSHTA
Trigger: TGCTGTATGGGAAGATCTCCAAGTACACGGGCAGGG...TAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATAGAGGATGTAGAGCTTaGTACTCACACACAGAAATG +
Preference number: 4 (lower is better)
Translates to: VCVCVSVCLSVCVGGRHYRGCRA*YSHTEM
Trigger: CATTTCTGTGTGTGAGTACCAAGCTCTACATCCTCT...ATAATGTCTACCTCCTACACAGACAGACAGACAGACAGACACACACACACACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
3UTR CAA 72 bp CTGTCTGTCTGTGTAGGAGGTAGACATTATGTGTCCTaGGTTGCTACTAACCTTAGTTCTTGGGACCAAGAT +
Preference number: 4 (lower is better)
Translates to: LSVCVGGRHYVS*VATNLSSWDQD
Trigger: ATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAATGTCTACCTCCTACACAGACAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAAAAAGAGGTGGTGGTCTaGGCCTCCTCTCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: YNDSPLRILLISMSRKLEKEVVV*ASSLLH
Trigger: ATGAAGGAGAGAGGAGGCCCAGACCACCACCTCTTT...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAACAGTTGGTTGGTGTTTaGGTGCCACAGCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: YNDSPLRILLISMSRKLEQLVGV*VPQQED
Trigger: GTCTTCCTGCTGTGGCACCCAAACACCAACCAACTG...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAAAGACAGGCAGTTGGTTaGTGTTTGGGTGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: YNDSPLRILLISMSRKLERQAVG*CLGATA
Trigger: TGCTGTGGCACCCAAACACCAACCAACTGCCTGTCT...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CCA 90 bp TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAACGCAAGAGAAGTGAATaGCTGCTCCCAGTGCATAGA +
Preference number: 4 (lower is better)
Translates to: YNDSPLRILLISMSRKLERKRSE*LLPVHR
Trigger: TCTATGCACTGGGAGCAGCCATTCACTTCTCTTGCG...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
3UTR CAA 72 bp CGCAAAACTGCCCAGTGTCTTTGTTCAGGTGACTTCTaGTACCCGTTTGTAAAATTTGTGATATTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: RKTAQCLCSGDF*YPFVKFVILGV
Trigger: AACACCTAATATCACAAATTTTACAAACGGGTACAAGAAGTCACCTGAACAAAGACACTGGGCAGTTTTGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS GCA 90 bp TCCCATGGTGGTGAGGTAGGTACCCTGAGCCGACCACAGAGGGGCTaGACCCAGGCCCAGCAAGATGGAGGTAGGGATCAGGGTGTACCA +
Preference number: 5 (lower is better)
Translates to: SHGGEVGTLSRPQRG*TQAQQDGGRDQGVP
Trigger: TGGTACACCCTGATCCCTACCTCCATCTTGCTGGGCCTGGGTGCAGCCCCTCTGTGGTCGGCTCAGGGTACCTACCTCACCACCATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS TCA 90 bp ACCACAGCCGGTGTAGATGCCCAGCAGTGTGTAGATCAGCTGCTGTaGGGGGTGATGAGTGCTGTTGGTGGCCGCTGGACCCATCAGGCA +
Preference number: 5 (lower is better)
Translates to: TTAGVDAQQCVDQLL*GVMSAVGGRWTHQA
Trigger: TGCCTGATGGGTCCAGCGGCCACCAACAGCACTCATCACCCCTCACAGCAGCTGATCTACACACTGCTGGGCATCTACACCGGCTGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CCA 90 bp AGGGTTACCACCAGGGTCAGGAGCCAGAGAGGAAGGCACACACACTaGGAAGGGCCGGCTAGAGGGGCTGTACCAGTTGGCATGGAAGTT +
Preference number: 5 (lower is better)
Translates to: RVTTRVRSQRGRHTH*EGPARGAVPVGMEV
Trigger: AACTTCCATGCCAACTGGTACAGCCCCTCTAGCCGGCCCTTCCCAGTGTGTGTGCCTTCCTCTCTGGCTCCTGACCCTGGTGGTAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231922.2
CDS-3UTR CAA 90 bp GTCTATCGCCTGAGCGCTGCTACGTGGACCGCCTCTGCTGACCCAGGCTGGGTTGAAGAAGACAGGCAGTaGGTTGGTGTTTGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: VYRLSAATWTASADPGWVEEDRQ*VGVWVP
Trigger: TGGCACCCAAACACCAACCAACTGCCTGTCTTCTTC...AACCCAGCCTGGGTCAGCAGAGGCGGTCCACGTAGCAGCGCTCAGGCGATAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp ACCCAGGCCCAGCAAGATGGAGGTAGGGATCAGGGTGTACCTGCAGAAAGACCCGAGGGGCTGTACCAGTaGGCATGGAAGTTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TQAQQDGGRDQGVPAERPEGLYQ*AWKLPR
Trigger: CCTGGGCAACTTCCATGCCAACTGGTACAGCCCCTC...GGGTCTTTCTGCAGGTACACCCTGATCCCTACCTCCATCTTGCTGGGCCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231922.2
CDS GCA 90 bp AGATGCCCAGCAGTGTGTAGATCAGCTGCTGTGAGGGGTGATGAGTaGTGTTGGTGGCCGCTGGACCCATCAGGCAGTCTTTGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: RCPAVCRSAAVRGDE*CWWPLDPSGSLWLH
Trigger: GTGGAGCCAAAGACTGCCTGATGGGTCCAGCGGCCACCAACAGCACTCATCACCCCTCACAGCAGCTGATCTACACACTGCTGGGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CCA 90 bp CCAGCAGTGTGTAGATCAGCTGCTGTGAGGGGTGATGAGTGCTGTTaGTGGCCGCTGGACCCATCAGGCAGTCTTTGGCTCCACAGGACA +
Preference number: 5 (lower is better)
Translates to: PAVCRSAAVRGDECC*WPLDPSGSLWLHRT
Trigger: TGTCCTGTGGAGCCAAAGACTGCCTGATGGGTCCAGCGGCCACCAACAGCACTCATCACCCCTCACAGCAGCTGATCTACACACTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CCA 90 bp GAATGGCTGCTCCCAGTGCATAGAGCGCAGCCCTGCCCGTGTACTTaGAGATCTTCCCATACAGCAGGGAGCACAGTGCAGTCATGGCTG +
Preference number: 5 (lower is better)
Translates to: EWLLPVHRAQPCPCT*RSSHTAGSTVQSWL
Trigger: CAGCCATGACTGCACTGTGCTCCCTGCTGTATGGGAAGATCTCCAAGTACACGGGCAGGGCTGCGCTCTATGCACTGGGAGCAGCCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp GTCTATCGCCTGAGCGCTGCTACGTGGACCGCCTCTGCTGACCCAGGCTGGGTTACCTTGGAAGCAGCCTaGACTTCCAGGTACTCAACT +
Preference number: 5 (lower is better)
Translates to: VYRLSAATWTASADPGWVTLEAA*TSRYST
Trigger: AGTTGAGTACCTGGAAGTCAAGGCTGCTTCCAAGGT...AACCCAGCCTGGGTCAGCAGAGGCGGTCCACGTAGCAGCGCTCAGGCGATAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS GCA 90 bp TGGGTGCCACAGCAGGAAGACCACAACGCAAGAGAAGTGAATGGCTaGTCCCAGTGCATAGAGCGCAGCCCTGCCCGTGTACTTGGAGAT +
Preference number: 5 (lower is better)
Translates to: WVPQQEDHNAREVNG*SQCIERSPARVLGD
Trigger: ATCTCCAAGTACACGGGCAGGGCTGCGCTCTATGCACTGGGAGCAGCCATTCACTTCTCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CCA 90 bp TGTTTGGGTGCCACAGCAGGAAGACCACAACGCAAGAGAAGTGAATaGCTGCTCCCAGTGCATAGAGCGCAGCCCTGCCCGTGTACTTGG +
Preference number: 5 (lower is better)
Translates to: CLGATAGRPQRKRSE*LLPVHRAQPCPCTW
Trigger: CCAAGTACACGGGCAGGGCTGCGCTCTATGCACTGGGAGCAGCCATTCACTTCTCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCAAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS TCA 90 bp CTTGGAGATCTTCCCATACAGCAGGGAGCACAGTGCAGTCATGGCTaGGAAGCAGATCATCACGTAGCCCACAAAGTGGATGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LGDLPIQQGAQCSHG*EADHHVAHKVDAQG
Trigger: GCCCTGGGCATCCACTTTGTGGGCTACGTGATGATCTGCTTCTCAGCCATGACTGCACTGTGCTCCCTGCTGTATGGGAAGATCTCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS TCA 90 bp GCACCCACCCAGGCCAGTGATTCCCTCTGTCCTACTCTCAAAAACTaGGGGTACAGGGAATGGGTCGTTGGTCCCTTGCTGGCTGAATCT +
Preference number: 5 (lower is better)
Translates to: APTQASDSLCPTLKN*GYREWVVGPLLAES
Trigger: AGATTCAGCCAGCAAGGGACCAACGACCCATTCCCTGTACCCTCAGTTTTTGAGAGTAGGACAGAGGGAATCACTGGCCTGGGTGGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000231922.2
CDS GCA 90 bp CAGCAGGAAGACCACAACGCAAGAGAAGTGAATGGCTGCTCCCAGTaGATAGAGCGCAGCCCTGCCCGTGTACTTGGAGATCTTCCCATA +
Preference number: 5 (lower is better)
Translates to: QQEDHNAREVNGCSQ*IERSPARVLGDLPI
Trigger: TATGGGAAGATCTCCAAGTACACGGGCAGGGCTGCGCTCTATGCACTGGGAGCAGCCATTCACTTCTCTTGCGTTGTGGTCTTCCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CCA 90 bp CCACAGGCCAGAGAGGACGAAGAAGACAGGCAGTTGGTTGGTGTTTaGGTGCCACAGCAGGAAGACCACAACGCAAGAGAAGTGAATGGC +
Preference number: 5 (lower is better)
Translates to: PQAREDEEDRQLVGV*VPQQEDHNAREVNG
Trigger: GCCATTCACTTCTCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCTGGCCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CCA 90 bp TCAGACATTCCCCACAGGCCAGAGAGGACGAAGAAGACAGGCAGTTaGTTGGTGTTTGGGTGCCACAGCAGGAAGACCACAACGCAAGAG +
Preference number: 5 (lower is better)
Translates to: SDIPHRPERTKKTGS*LVFGCHSRKTTTQE
Trigger: CTCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCTGGCCTGTGGGGAATGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS GCA 90 bp TCTTTGGCTCCACAGGACATGAGCTGTTCCTCTGGGATGGCCTCTTaGATGGACATCTTGCCGAACACCAGTGAGGAAATCAGGTTGCCC +
Preference number: 5 (lower is better)
Translates to: SLAPQDMSCSSGMAS*MDILPNTSEEIRLP
Trigger: GGGCAACCTGATTTCCTCACTGGTGTTCGGCAAGATGTCCATGCAAGAGGCCATCCCAGAGGAACAGCTCATGTCCTGTGGAGCCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CCA 90 bp ACATTCCCCACAGGCCAGAGAGGACGAAGAAGACAGGCAGTTGGTTaGTGTTTGGGTGCCACAGCAGGAAGACCACAACGCAAGAGAAGT +
Preference number: 5 (lower is better)
Translates to: TFPTGQRGRRRQAVG*CLGATAGRPQRKRS
Trigger: ACTTCTCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCTGGCCTGTGGGGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CCA 90 bp TGTACTTGGAGATCTTCCCATACAGCAGGGAGCACAGTGCAGTCATaGCTGAGAAGCAGATCATCACGTAGCCCACAAAGTGGATGCCCA +
Preference number: 5 (lower is better)
Translates to: CTWRSSHTAGSTVQS*LRSRSSRSPQSGCP
Trigger: TGGGCATCCACTTTGTGGGCTACGTGATGATCTGCTTCTCAGCCATGACTGCACTGTGCTCCCTGCTGTATGGGAAGATCTCCAAGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp TTCCTCTTCTGCCTGGTTTTTCTTTTCTGCACCAAGGACCTTGGAAGCAGCCAGCAGTTGGCATGGAAGTaGCCCAGGGAGAAGACCACA +
Preference number: 5 (lower is better)
Translates to: FLFCLVFLFCTKDLGSSQQLAWK*PREKTT
Trigger: TGTGGTCTTCTCCCTGGGCAACTTCCATGCCAACTG...CTGGCTGCTTCCAAGGTCCTTGGTGCAGAAAAGAAAAACCAGGCAGAAGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000231922.2
CDS GCA 90 bp CAGTCATGGCTGAGAAGCAGATCATCACGTAGCCCACAAAGTGGATaGCCAGGGCACAGGTCACATAAGACTTTGTGTACTCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: QSWLRSRSSRSPQSG*PGHRSHKTLCTLQR
Trigger: TCTCTGGAGAGTACACAAAGTCTTATGTGACCTGTGCCCTGGGCATCCACTTTGTGGGCTACGTGATGATCTGCTTCTCAGCCATGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp GTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGAACAGTTGGCATGGAAGTaGCCCAGGGAGAAGACCACA +
Preference number: 5 (lower is better)
Translates to: VSLVATNLSSWDQDLGTEQLAWK*PREKTT
Trigger: TGTGGTCTTCTCCCTGGGCAACTTCCATGCCAACTG...TTCAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp TACTGGTTCACCACATCTTTGCCAAGCTTCCCCACCTTTTCCGCTTGCAGATTTTTGCAGCCACACTTCTaGATGAGGATAGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: YWFTTSLPSFPTFSACRFLQPHF*MRIGGR
Trigger: CCTCCCACCTATCCTCATCAAGAAGTGTGGCTGCAA...AAATCTGCAAGCGGAAAAGGTGGGGAAGCTTGGCAAAGATGTGGTGAACCAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000231922.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATCCCCACCTTTTCCGCTaGCAGATTTCCCATGGTGGT +
Preference number: 5 (lower is better)
Translates to: VCVCVSVCLSVCVGGRHYPHLFR*QISHGG
Trigger: ACCACCATGGGAAATCTGCAAGCGGAAAAGGTGGGG...ATAATGTCTACCTCCTACACAGACAGACAGACAGACAGACACACACACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp ATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACCCATCAGGCAGTCTTaGGCTCCACAGGACATGAGC +
Preference number: 5 (lower is better)
Translates to: IMCPWLLLTLVLGTKISGPIRQS*APQDMS
Trigger: GCTCATGTCCTGTGGAGCCAAAGACTGCCTGATGGG...TCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATTCTGCACCAAGGACCTaGGAAGCAGCCTTGACTTCC +
Preference number: 5 (lower is better)
Translates to: VCVCVSVCLSVCVGGRHYSAPRT*EAALTS
Trigger: GGAAGTCAAGGCTGCTTCCAAGGTCCTTGGTGCAGA...ATAATGTCTACCTCCTACACAGACAGACAGACAGACAGACACACACACACACAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp GTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGAAAGTGAGGAAATCAGGTaGCCCCACACTCCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: VSLVATNLSSWDQDLGTESEEIR*PHTPED
Trigger: ATCTTCTGGAGTGTGGGGCAACCTGATTTCCTCACT...TTCAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp ATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGATTGCAGCCACACTTCTaGATGAGGATAGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: IMCPWLLLTLVLGTKISGLQPHF*MRIGGR
Trigger: CCTCCCACCTATCCTCATCAAGAAGTGTGGCTGCAA...TCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp ATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGTCCAGAGAGGAACTCTaGTTGAAACCCACTGTACAG +
Preference number: 5 (lower is better)
Translates to: MCPWLLLTLVLGTKISGLSREEL*LKPTVQ
Trigger: CTGTACAGTGGGTTTCAACAAGAGTTCCTCTCTGGA...CAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATACACCGAAAAGAGCATaGTTCTGTGTCTGCCAGACA +
Preference number: 5 (lower is better)
Translates to: VCVCVSVCLSVCVGGRHYTPKRA*FCVCQT
Trigger: TGTCTGGCAGACACAGAACAATGCTCTTTTCGGTGT...ATAATGTCTACCTCCTACACAGACAGACAGACAGACAGACACACACACACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAAGCCCTGCCCGTGTACTaGGAGATCTTCCCATACAGC +
Preference number: 5 (lower is better)
Translates to: YNDSPLRILLISMSRKLEALPVY*EIFPYS
Trigger: GCTGTATGGGAAGATCTCCAAGTACACGGGCAGGGC...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATCCACACTCCAGAAGATaGGAATACCAGGAAAAAGAT +
Preference number: 5 (lower is better)
Translates to: VCVCVSVCLSVCVGGRHYPHSRR*EYQEKD
Trigger: ATCTTTTTCCTGGTATTCCAATCTTCTGGAGTGTGG...ATAATGTCTACCTCCTACACAGACAGACAGACAGACAGACACACACACACACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAAGCAGTTGGTTGGTGTTaGGGTGCCACAGCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: YNDSPLRILLISMSRKLEAVGWC*GATAGR
Trigger: TCTTCCTGCTGTGGCACCCAAACACCAACCAACTGC...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp GACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAAATTTGTGCAAAAGCAGGTTCTTaGTTCTCCTCAAACAGGACA +
Preference number: 5 (lower is better)
Translates to: DSPLRILLISMSRKLEICAKAGS*FSSNRT
Trigger: TGTCCTGTTTGAGGAGAACAAAGAACCTGCTTTTGC...ACAAATTTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS-3UTR CAA 90 bp TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAAAGGTCACATAAGACTTaGTGTACTCTCCAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: YNDSPLRILLISMSRKLERSHKT*CTLQRG
Trigger: TCCTCTCTGGAGAGTACACAAAGTCTTATGTGACCT...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CCA 72 bp ACCAGGGTCAGGAGCCAGAGAGGAAGGCACACACACTaGGAAGGGCCGGCTAGAGGGGCTGTACCAGTTGGC +
Preference number: 6 (lower is better)
Translates to: TRVRSQRGRHTH*EGPARGAVPVG
Trigger: GCCAACTGGTACAGCCCCTCTAGCCGGCCCTTCCCAGTGTGTGTGCCTTCCTCTCTGGCTCCTGACCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231922.2
CDS CCA 72 bp GCCACAGCAGGAAGACCACAACGCAAGAGAAGTGAATaGCTGCTCCCAGTGCATAGAGCGCAGCCCTGCCCG +
Preference number: 6 (lower is better)
Translates to: ATAGRPQRKRSE*LLPVHRAQPCP
Trigger: CGGGCAGGGCTGCGCTCTATGCACTGGGAGCAGCCATTCACTTCTCTTGCGTTGTGGTCTTCCTGCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CCA 72 bp AGATCAGCTGCTGTGAGGGGTGATGAGTGCTGTTGGTaGCCGCTGGACCCATCAGGCAGTCTTTGGCTCCAC +
Preference number: 6 (lower is better)
Translates to: RSAAVRGDECCW*PLDPSGSLWLH
Trigger: GTGGAGCCAAAGACTGCCTGATGGGTCCAGCGGCCACCAACAGCACTCATCACCCCTCACAGCAGCTGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CCA 72 bp CTCCCAGTGCATAGAGCGCAGCCCTGCCCGTGTACTTaGAGATCTTCCCATACAGCAGGGAGCACAGTGCAG +
Preference number: 6 (lower is better)
Translates to: LPVHRAQPCPCT*RSSHTAGSTVQ
Trigger: CTGCACTGTGCTCCCTGCTGTATGGGAAGATCTCCAAGTACACGGGCAGGGCTGCGCTCTATGCACTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 72 bp GTGCTGTTGGTGGCCGCTGGACCCATCAGGCAGTCTTaGGCTCCACAGGACATGAGCTGTTCCTCTGGGATG +
Preference number: 6 (lower is better)
Translates to: VLLVAAGPIRQS*APQDMSCSSGM
Trigger: CATCCCAGAGGAACAGCTCATGTCCTGTGGAGCCAAAGACTGCCTGATGGGTCCAGCGGCCACCAACAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS GCA 72 bp GCAGTGTGTAGATCAGCTGCTGTGAGGGGTGATGAGTaGTGTTGGTGGCCGCTGGACCCATCAGGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: AVCRSAAVRGDE*CWWPLDPSGSL
Trigger: AAGACTGCCTGATGGGTCCAGCGGCCACCAACAGCACTCATCACCCCTCACAGCAGCTGATCTACACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CCA 72 bp TGTAGATCAGCTGCTGTGAGGGGTGATGAGTGCTGTTaGTGGCCGCTGGACCCATCAGGCAGTCTTTGGCTC +
Preference number: 6 (lower is better)
Translates to: CRSAAVRGDECC*WPLDPSGSLWL
Trigger: GAGCCAAAGACTGCCTGATGGGTCCAGCGGCCACCAACAGCACTCATCACCCCTCACAGCAGCTGATCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS GCA 72 bp GACCACAACGCAAGAGAAGTGAATGGCTGCTCCCAGTaGATAGAGCGCAGCCCTGCCCGTGTACTTGGAGAT +
Preference number: 6 (lower is better)
Translates to: DHNAREVNGCSQ*IERSPARVLGD
Trigger: ATCTCCAAGTACACGGGCAGGGCTGCGCTCTATGCACTGGGAGCAGCCATTCACTTCTCTTGCGTTGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CCA 72 bp ACAGGCCAGAGAGGACGAAGAAGACAGGCAGTTGGTTaGTGTTTGGGTGCCACAGCAGGAAGACCACAACGC +
Preference number: 6 (lower is better)
Translates to: TGQRGRRRQAVG*CLGATAGRPQR
Trigger: GCGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCTGGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 72 bp CACAGGCCAGAGAGGACGAAGAAGACAGGCAGTTGGTaGGTGTTTGGGTGCCACAGCAGGAAGACCACAACG +
Preference number: 6 (lower is better)
Translates to: HRPERTKKTGSW*VFGCHSRKTTT
Trigger: CGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCTGGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 90 bp GACATTCCCCACAGGCCAGAGAGGACGAAGAAGACAGGCAGTTGGTaGGTGTTTGGGTGCCACAGCAGGAAGACCACAACGCAAGAGAAG +
Preference number: 6 (lower is better)
Translates to: DIPHRPERTKKTGSW*VFGCHSRKTTTQEK
Trigger: CTTCTCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCTGGCCTGTGGGGAATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 90 bp GTCAGACATTCCCCACAGGCCAGAGAGGACGAAGAAGACAGGCAGTaGGTTGGTGTTTGGGTGCCACAGCAGGAAGACCACAACGCAAGA +
Preference number: 6 (lower is better)
Translates to: VRHSPQAREDEEDRQ*VGVWVPQQEDHNAR
Trigger: TCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCTGGCCTGTGGGGAATGTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CCA 72 bp GCAGTCTTTGGCTCCACAGGACATGAGCTGTTCCTCTaGGATGGCCTCTTGCATGGACATCTTGCCGAACAC +
Preference number: 6 (lower is better)
Translates to: AVFGSTGHELFL*DGLLHGHLAEH
Trigger: GTGTTCGGCAAGATGTCCATGCAAGAGGCCATCCCAGAGGAACAGCTCATGTCCTGTGGAGCCAAAGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 90 bp CAGGACATGAGCTGTTCCTCTGGGATGGCCTCTTGCATGGACATCTaGCCGAACACCAGTGAGGAAATCAGGTTGCCCCACACTCCAGAA +
Preference number: 6 (lower is better)
Translates to: QDMSCSSGMASCMDI*PNTSEEIRLPHTPE
Trigger: TTCTGGAGTGTGGGGCAACCTGATTTCCTCACTGGTGTTCGGCAAGATGTCCATGCAAGAGGCCATCCCAGAGGAACAGCTCATGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS GCA 72 bp CCACAGGACATGAGCTGTTCCTCTGGGATGGCCTCTTaGATGGACATCTTGCCGAACACCAGTGAGGAAATC +
Preference number: 6 (lower is better)
Translates to: PQDMSCSSGMAS*MDILPNTSEEI
Trigger: GATTTCCTCACTGGTGTTCGGCAAGATGTCCATGCAAGAGGCCATCCCAGAGGAACAGCTCATGTCCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS TCA 72 bp GATGGCCTCTTGCATGGACATCTTGCCGAACACCAGTaGGGAAATCAGGTTGCCCCACACTCCAGAAGATTG +
Preference number: 6 (lower is better)
Translates to: DGLLHGHLAEHQ*GNQVAPHSRRL
Trigger: CAATCTTCTGGAGTGTGGGGCAACCTGATTTCCTCACTGGTGTTCGGCAAGATGTCCATGCAAGAGGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CCA 72 bp AGAGAGGACGAAGAAGACAGGCAGTTGGTTGGTGTTTaGGTGCCACAGCAGGAAGACCACAACGCAAGAGAA +
Preference number: 6 (lower is better)
Translates to: REDEEDRQLVGV*VPQQEDHNARE
Trigger: TTCTCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 90 bp GCCTCTTGCATGGACATCTTGCCGAACACCAGTGAGGAAATCAGGTaGCCCCACACTCCAGAAGATTGGAATACCAGGAAAAAGATGCCA +
Preference number: 6 (lower is better)
Translates to: ASCMDILPNTSEEIR*PHTPEDWNTRKKMP
Trigger: TGGCATCTTTTTCCTGGTATTCCAATCTTCTGGAGTGTGGGGCAACCTGATTTCCTCACTGGTGTTCGGCAAGATGTCCATGCAAGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 90 bp CGTAGCCCACAAAGTGGATGCCCAGGGCACAGGTCACATAAGACTTaGTGTACTCTCCAGAGAGGAACTCTTGTTGAAACCCACTGTACA +
Preference number: 6 (lower is better)
Translates to: RSPQSGCPGHRSHKT*CTLQRGTLVETHCT
Trigger: TGTACAGTGGGTTTCAACAAGAGTTCCTCTCTGGAGAGTACACAAAGTCTTATGTGACCTGTGCCCTGGGCATCCACTTTGTGGGCTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 72 bp ATGGACATCTTGCCGAACACCAGTGAGGAAATCAGGTaGCCCCACACTCCAGAAGATTGGAATACCAGGAAA +
Preference number: 6 (lower is better)
Translates to: MDILPNTSEEIR*PHTPEDWNTRK
Trigger: TTTCCTGGTATTCCAATCTTCTGGAGTGTGGGGCAACCTGATTTCCTCACTGGTGTTCGGCAAGATGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 72 bp CAAAGTGGATGCCCAGGGCACAGGTCACATAAGACTTaGTGTACTCTCCAGAGAGGAACTCTTGTTGAAACC +
Preference number: 6 (lower is better)
Translates to: QSGCPGHRSHKT*CTLQRGTLVET
Trigger: GGTTTCAACAAGAGTTCCTCTCTGGAGAGTACACAAAGTCTTATGTGACCTGTGCCCTGGGCATCCACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 72 bp TCTTTGTTCTCCTCAAACAGGACACCGAAAAGAGCATaGTTCTGTGTCTGCCAGACAGCGTCAGACATTCCC +
Preference number: 6 (lower is better)
Translates to: SLFSSNRTPKRA*FCVCQTASDIP
Trigger: GGGAATGTCTGACGCTGTCTGGCAGACACAGAACAATGCTCTTTTCGGTGTCCTGTTTGAGGAGAACAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 72 bp TCTTCTGCCTGGTTTTTCTTTTCTGCACCAAGGACCTaGGAAGCAGCCTTGACTTCCAGGTACTCAACTGTC +
Preference number: 6 (lower is better)
Translates to: SSAWFFFSAPRT*EAALTSRYSTV
Trigger: GACAGTTGAGTACCTGGAAGTCAAGGCTGCTTCCAAGGTCCTTGGTGCAGAAAAGAAAAACCAGGCAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 90 bp GGCACAGGTCACATAAGACTTTGTGTACTCTCCAGAGAGGAACTCTaGTTGAAACCCACTGTACAGTGGCAGGAACATCAGGAGACACAA +
Preference number: 6 (lower is better)
Translates to: GTGHIRLCVLSREEL*LKPTVQWQEHQETQ
Trigger: TTGTGTCTCCTGATGTTCCTGCCACTGTACAGTGGGTTTCAACAAGAGTTCCTCTCTGGAGAGTACACAAAGTCTTATGTGACCTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 90 bp ACAGGTCACATAAGACTTTGTGTACTCTCCAGAGAGGAACTCTTGTaGAAACCCACTGTACAGTGGCAGGAACATCAGGAGACACAAACG +
Preference number: 6 (lower is better)
Translates to: TGHIRLCVLSREELL*KPTVQWQEHQETQT
Trigger: CGTTTGTGTCTCCTGATGTTCCTGCCACTGTACAGTGGGTTTCAACAAGAGTTCCTCTCTGGAGAGTACACAAAGTCTTATGTGACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 72 bp CTGTACAGTGGCAGGAACATCAGGAGACACAAACGCTaGTCTCTAAACAGCATGAAGGTTGACAGTAATGTG +
Preference number: 6 (lower is better)
Translates to: LYSGRNIRRHKR*SLNSMKVDSNV
Trigger: CACATTACTGTCAACCTTCATGCTGTTTAGAGACAAGCGTTTGTGTCTCCTGATGTTCCTGCCACTGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 72 bp ATAAGACTTTGTGTACTCTCCAGAGAGGAACTCTTGTaGAAACCCACTGTACAGTGGCAGGAACATCAGGAG +
Preference number: 6 (lower is better)
Translates to: IRLCVLSREELL*KPTVQWQEHQE
Trigger: CTCCTGATGTTCCTGCCACTGTACAGTGGGTTTCAACAAGAGTTCCTCTCTGGAGAGTACACAAAGTCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5
CDS CAA 72 bp CACATAAGACTTTGTGTACTCTCCAGAGAGGAACTCTaGTTGAAACCCACTGTACAGTGGCAGGAACATCAG +
Preference number: 6 (lower is better)
Translates to: HIRLCVLSREEL*LKPTVQWQEHQ
Trigger: CTGATGTTCCTGCCACTGTACAGTGGGTTTCAACAAGAGTTCCTCTCTGGAGAGTACACAAAGTCTTATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070059.5