Pregenerated sensors for UNC93A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056133Ensembl transcript IDs: ENSMUST00000070059.5, ENSMUST00000231922.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TCCCATGGTGGTGAGGTAGGTACCCTGAGCCGACCACAGAGGGGCTaGACCCAGGCCCAGCAAGATGGAGGTAGGGATCAGGGTGTACCT | + |
Preference number: 1 (lower is better) Translates to: SHGGEVGTLSRPQRG*TQAQQDGGRDQGVP Trigger: AGGTACACCCTGATCCCTACCTCCATCTTGCTGGGCCTGGGTGCAGCCCCTCTGTGGTCGGCTCAGGGTACCTACCTCACCACCATGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231922.2 |
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3UTR CCA 90 bp | GAAACAGTTGTGGAGGGTCGAGTCTATCGCCTGAGCGCTGCTACGTaGACCGCCTCTGCTGACCCAGGCTGGGTTCTCAGCCATCACTTG | + |
Preference number: 1 (lower is better) Translates to: ETVVEGRVYRLSAAT*TASADPGWVLSHHL Trigger: CAAGTGATGGCTGAGAACCCAGCCTGGGTCAGCAGAGGCGGTCCACGTAGCAGCGCTCAGGCGATAGACTCGACCCTCCACAACTGTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070059.5 ENSMUST00000231922.2 |
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3UTR GCA 90 bp | GTCCTGGCCCTCCTGGCTACTAGCCAATGGCTCCACGGATCTTTCTaGCTCTGCCTCTGCCTCTGCCTCCCCAGTACAGGAATTATACAT | + |
Preference number: 1 (lower is better) Translates to: VLALLATSQWLHGSF*LCLCLCLPSTGIIH Trigger: ATGTATAATTCCTGTACTGGGGAGGCAGAGGCAGAGGCAGAGGCAGAAAGATCCGTGGAGCCATTGGCTAGTAGCCAGGAGGGCCAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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3UTR GCA 90 bp | TGGGTTGAGGGTTCAAACTGGGGTCCTCGTGCTCAGCCTAGAAAGTaGTTTAATGACAGAGCCACTTCCTCCACCCCAGTACCTAGCTAC | + |
Preference number: 1 (lower is better) Translates to: WVEGSNWGPRAQPRK*FNDRATSSTPVPSY Trigger: GTAGCTAGGTACTGGGGTGGAGGAAGTGGCTCTGTCATTAAAGCACTTTCTAGGCTGAGCACGAGGACCCCAGTTTGAACCCTCAACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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3UTR CAA 90 bp | GACAGAGCCACTTCCTCCACCCCAGTACCTAGCTACGGCTTCCTTTaGGTAGTGTTGTGGGCTGATCGTGTGGCCTTGTGTTTGCTAAGG | + |
Preference number: 2 (lower is better) Translates to: DRATSSTPVPSYGFL*VVLWADRVALCLLR Trigger: CCTTAGCAAACACAAGGCCACACGATCAGCCCACAACACTACCAAAAGGAAGCCGTAGCTAGGTACTGGGGTGGAGGAAGTGGCTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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3UTR CAA 90 bp | ATACTGGTTCACCACATCTTTGCCAAGCTTCCCCACCTTTTCCGCTaGCAGATTTCCCATGGTGGTGAGGTAGGTACCCTGAGCCGACCA | + |
Preference number: 2 (lower is better) Translates to: ILVHHIFAKLPHLFR*QISHGGEVGTLSRP Trigger: TGGTCGGCTCAGGGTACCTACCTCACCACCATGGGAAATCTGCAAGCGGAAAAGGTGGGGAAGCTTGGCAAAGATGTGGTGAACCAGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231922.2 |
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3UTR-3UTR GCA 90 bp | ATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGCTCTGCCTCTGCCTCTaGCTCCCCAGTACAGGAATT | + |
Preference number: 2 (lower is better) Translates to: MCPWLLLTLVLGTKISGLLCLCL*LPSTGI Trigger: AATTCCTGTACTGGGGAGGCAGAGGCAGAGGCAGAG...CAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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3UTR-3UTR TCA 90 bp | GTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGAAGGTAGTGTTGTGGGCTaGTCGTGTGGCCTTGTGTTT | + |
Preference number: 2 (lower is better) Translates to: VSLVATNLSSWDQDLGTEGSVVG*SCGLVF Trigger: AAACACAAGGCCACACGATCAGCCCACAACACTACC...TTCAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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3UTR-3UTR GCA 90 bp | TTCCTCTTCTGCCTGGTTTTTCTTTTCTGCACCAAGGACCTTGGAAGCAGCCAGGGATCAGGGTGTACCTaGAGAAAGACCCAGCAAAGA | + |
Preference number: 2 (lower is better) Translates to: FLFCLVFLFCTKDLGSSQGSGCT*RKTQQR Trigger: TCTTTGCTGGGTCTTTCTGCAGGTACACCCTGATCC...CTGGCTGCTTCCAAGGTCCTTGGTGCAGAAAAGAAAAACCAGGCAGAAGAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231922.2 |
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3UTR CAA 90 bp | TCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATGTGTCCTaGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACT | + |
Preference number: 2 (lower is better) Translates to: SVCLSVCVGGRHYVS*VATNLSSWDQDLGT Trigger: AGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAATGTCTACCTCCTACACAGACAGACAGACAGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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3UTR GCA 72 bp | GGTGAGGTAGGTACCCTGAGCCGACCACAGAGGGGCTaGACCCAGGCCCAGCAAGATGGAGGTAGGGATCAG | + |
Preference number: 3 (lower is better) Translates to: GEVGTLSRPQRG*TQAQQDGGRDQ Trigger: CTGATCCCTACCTCCATCTTGCTGGGCCTGGGTGCAGCCCCTCTGTGGTCGGCTCAGGGTACCTACCTCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231922.2 |
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3UTR CCA 72 bp | AGCGCTGCTACGTGGACCGCCTCTGCTGACCCAGGCTaGGTTCTCAGCCATCACTTGTCCACATTTACATTT | + |
Preference number: 3 (lower is better) Translates to: SAATWTASADPG*VLSHHLSTFTF Trigger: AAATGTAAATGTGGACAAGTGATGGCTGAGAACCCAGCCTGGGTCAGCAGAGGCGGTCCACGTAGCAGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231922.2 |
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CDS-3UTR GCA 90 bp | GTCTATCGCCTGAGCGCTGCTACGTGGACCGCCTCTGCTGACCCAGGCTGGGTTGTGAGGGGTGATGAGTaGTGTTGGTGGCCGCTGGAC | + |
Preference number: 4 (lower is better) Translates to: VYRLSAATWTASADPGWVVRGDE*CWWPLD Trigger: GTCCAGCGGCCACCAACAGCACTCATCACCCCTCAC...AACCCAGCCTGGGTCAGCAGAGGCGGTCCACGTAGCAGCGCTCAGGCGATAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR TCA 90 bp | TACTGGTTCACCACATCTTTGCCAAGCTTCCCCACCTTTTCCGCTTGCAGATTTAGACACCCGTGTGTGTaGGGGCAGGGCCCCAGGAGA | + |
Preference number: 4 (lower is better) Translates to: YWFTTSLPSFPTFSACRFRHPCV*GQGPRR Trigger: TCTCCTGGGGCCCTGCCCTCACACACACGGGTGTCT...AAATCTGCAAGCGGAAAAGGTGGGGAAGCTTGGCAAAGATGTGGTGAACCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000231922.2 |
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CDS-3UTR CCA 90 bp | GTCTATCGCCTGAGCGCTGCTACGTGGACCGCCTCTGCTGACCCAGGCTGGGTTCACACTCCAGAAGATTaGAATACCAGGAAAAAGATG | + |
Preference number: 4 (lower is better) Translates to: VYRLSAATWTASADPGWVHTPED*NTRKKM Trigger: CATCTTTTTCCTGGTATTCCAATCTTCTGGAGTGTG...AACCCAGCCTGGGTCAGCAGAGGCGGTCCACGTAGCAGCGCTCAGGCGATAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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3UTR CAA 72 bp | ACTTCCTCCACCCCAGTACCTAGCTACGGCTTCCTTTaGGTAGTGTTGTGGGCTGATCGTGTGGCCTTGTGT | + |
Preference number: 4 (lower is better) Translates to: TSSTPVPSYGFL*VVLWADRVALC Trigger: ACACAAGGCCACACGATCAGCCCACAACACTACCAAAAGGAAGCCGTAGCTAGGTACTGGGGTGGAGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | GCCCAGCAAGATGGAGGTAGGGATCAGGGTGTACCTGCAGAAAGACCCAGCAAACTTGATGAGGATAGGTaGGAGGAACATGGAGGACAG | + |
Preference number: 4 (lower is better) Translates to: AQQDGGRDQGVPAERPSKLDEDR*EEHGGQ Trigger: CTGTCCTCCATGTTCCTCCCACCTATCCTCATCAAG...TTTGCTGGGTCTTTCTGCAGGTACACCCTGATCCCTACCTCCATCTTGCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231922.2 |
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CDS-3UTR CCA 90 bp | GTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGAAGGACCAAAGAGGTGGTaGTCTGGGCCTCCTCTCTCC | + |
Preference number: 4 (lower is better) Translates to: VSLVATNLSSWDQDLGTEGPKRW*SGPPLS Trigger: GGAGAGAGGAGGCCCAGACCACCACCTCTTTGGTCC...TTCAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR TCA 90 bp | TACTGGTTCACCACATCTTTGCCAAGCTTCCCCACCTTTTCCGCTTGCAGATTTACCCACCCAGGCCAGTaGTTCCCTCTGTCCTACTCT | + |
Preference number: 4 (lower is better) Translates to: YWFTTSLPSFPTFSACRFTHPGQ*FPLSYS Trigger: AGAGTAGGACAGAGGGAATCACTGGCCTGGGTGGGT...AAATCTGCAAGCGGAAAAGGTGGGGAAGCTTGGCAAAGATGTGGTGAACCAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231922.2 |
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CDS-3UTR CCA 90 bp | TCTTCTGCCTGGTTTTTCTTTTCTGCACCAAGGACCTTGGAAGCAGCCAGGAAAAGGGGCTGTACCAGTTaGCATGGAAGTTGCCCAGGG | + |
Preference number: 4 (lower is better) Translates to: SSAWFFFSAPRTLEAARKRGCTS*HGSCPG Trigger: CCCTGGGCAACTTCCATGCCAACTGGTACAGCCCCT...TTTCCTGGCTGCTTCCAAGGTCCTTGGTGCAGAAAAGAAAAACCAGGCAGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000231922.2 |
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CDS-3UTR CCA 90 bp | CATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGTGTGGACCAAAGAGGTaGTGGTCTGGGCCTCCTCTC | + |
Preference number: 4 (lower is better) Translates to: HYVSLVATNLSSWDQDLGCGPKR*WSGPPL Trigger: GAGAGGAGGCCCAGACCACCACCTCTTTGGTCCACA...CCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | CATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGTCAGGGTGTACCAGTTaGCATGGAAGTTGCCCAGGG | + |
Preference number: 4 (lower is better) Translates to: HYVSLVATNLSSWDQDLGSGCTS*HGSCPG Trigger: CCCTGGGCAACTTCCATGCCAACTGGTACACCCTGA...CCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | ATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGAGCTGTTGGTGGCCGCTaGACCCATCAGGCAGTCTTT | + |
Preference number: 4 (lower is better) Translates to: IMCPWLLLTLVLGTKISGAVGGR*THQAVF Trigger: AAAGACTGCCTGATGGGTCCAGCGGCCACCAACAGC...TCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATTCTGGGATGGCCTCTTaGATGGACATCTTGCCGAAC | + |
Preference number: 4 (lower is better) Translates to: VCVCVSVCLSVCVGGRHYSGMAS*MDILPN Trigger: GTTCGGCAAGATGTCCATGCAAGAGGCCATCCCAGA...ATAATGTCTACCTCCTACACAGACAGACAGACAGACAGACACACACACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | ATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGCTTGATGAGGATAGGTaGGAGGAACATGGAGGACAG | + |
Preference number: 4 (lower is better) Translates to: MCPWLLLTLVLGTKISGLLDEDR*EEHGGQ Trigger: CTGTCCTCCATGTTCCTCCCACCTATCCTCATCAAG...CAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | CATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGGTGTACCAGTTGGCATaGAAGTTGCCCAGGGAGAAG | + |
Preference number: 4 (lower is better) Translates to: HYVSLVATNLSSWDQDLGVYQLA*KLPREK Trigger: CTTCTCCCTGGGCAACTTCCATGCCAACTGGTACAC...CCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATGCTGTTCCTCTGGGATaGCCTCTTGCATGGACATCT | + |
Preference number: 4 (lower is better) Translates to: VCVCVSVCLSVCVGGRHYAVPLG*PLAWTS Trigger: AGATGTCCATGCAAGAGGCCATCCCAGAGGAACAGC...ATAATGTCTACCTCCTACACAGACAGACAGACAGACAGACACACACACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | ATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGAAGAAGACAGGCAGTTaGTTGGTGTTTGGGTGCCAC | + |
Preference number: 4 (lower is better) Translates to: MCPWLLLTLVLGTKISGLKKTGS*LVFGCH Trigger: GTGGCACCCAAACACCAACCAACTGCCTGTCTTCTT...CAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR TCA 90 bp | ATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGAGTAGATCAGCTGCTGTaGGGGGTGATGAGTGCTGTT | + |
Preference number: 4 (lower is better) Translates to: IMCPWLLLTLVLGTKISGVDQLL*GVMSAV Trigger: AACAGCACTCATCACCCCTCACAGCAGCTGATCTAC...TCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR GCA 90 bp | TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAACGACCACAGAGGGGCTaGACCCAGGCCCAGCAAGAT | + |
Preference number: 4 (lower is better) Translates to: YNDSPLRILLISMSRKLERPQRG*TQAQQD Trigger: ATCTTGCTGGGCCTGGGTGCAGCCCCTCTGTGGTCG...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAACAGCTACCAGCAGGATaGCCAGGACACCACAGCCGG | + |
Preference number: 4 (lower is better) Translates to: YNDSPLRILLISMSRKLEQLPAG*PGHHSR Trigger: CCGGCTGTGGTGTCCTGGCCATCCTGCTGGTAGCTG...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | CATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGAGGTTGACAGTAATGTaGACCAAAGAGGTGGTGGTC | + |
Preference number: 4 (lower is better) Translates to: HYVSLVATNLSSWDQDLGRLTVM*TKEVVV Trigger: GACCACCACCTCTTTGGTCCACATTACTGTCAACCT...CCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR GCA 90 bp | GACTATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAAGCCCACAAAGTGGATaGCCAGGGCACAGGTCACAT | + |
Preference number: 4 (lower is better) Translates to: DYNDSPLRILLISMSRKLSPQSG*PGHRSH Trigger: ATGTGACCTGTGCCCTGGGCATCCACTTTGTGGGCT...TAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | ATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGAAAACCCACTGTACAGTaGCAGGAACATCAGGAGACA | + |
Preference number: 4 (lower is better) Translates to: IMCPWLLLTLVLGTKISGKPTVQ*QEHQET Trigger: TGTCTCCTGATGTTCCTGCCACTGTACAGTGGGTTT...TCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR TCA 90 bp | GACTATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAACAACGCAAGAGAAGTaGATGGCTGCTCCCAGTGCA | + |
Preference number: 4 (lower is better) Translates to: DYNDSPLRILLISMSRKLTTQEK*MAAPSA Trigger: TGCACTGGGAGCAGCCATTCACTTCTCTTGCGTTGT...TAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | GACTATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTACCCTGCCCGTGTACTTaGAGATCTTCCCATACAGCA | + |
Preference number: 4 (lower is better) Translates to: DYNDSPLRILLISMSRKLPCPCT*RSSHTA Trigger: TGCTGTATGGGAAGATCTCCAAGTACACGGGCAGGG...TAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATAGAGGATGTAGAGCTTaGTACTCACACACAGAAATG | + |
Preference number: 4 (lower is better) Translates to: VCVCVSVCLSVCVGGRHYRGCRA*YSHTEM Trigger: CATTTCTGTGTGTGAGTACCAAGCTCTACATCCTCT...ATAATGTCTACCTCCTACACAGACAGACAGACAGACAGACACACACACACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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3UTR CAA 72 bp | CTGTCTGTCTGTGTAGGAGGTAGACATTATGTGTCCTaGGTTGCTACTAACCTTAGTTCTTGGGACCAAGAT | + |
Preference number: 4 (lower is better) Translates to: LSVCVGGRHYVS*VATNLSSWDQD Trigger: ATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAATGTCTACCTCCTACACAGACAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAAAAAGAGGTGGTGGTCTaGGCCTCCTCTCTCCTTCAT | + |
Preference number: 4 (lower is better) Translates to: YNDSPLRILLISMSRKLEKEVVV*ASSLLH Trigger: ATGAAGGAGAGAGGAGGCCCAGACCACCACCTCTTT...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAACAGTTGGTTGGTGTTTaGGTGCCACAGCAGGAAGAC | + |
Preference number: 4 (lower is better) Translates to: YNDSPLRILLISMSRKLEQLVGV*VPQQED Trigger: GTCTTCCTGCTGTGGCACCCAAACACCAACCAACTG...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAAAGACAGGCAGTTGGTTaGTGTTTGGGTGCCACAGCA | + |
Preference number: 4 (lower is better) Translates to: YNDSPLRILLISMSRKLERQAVG*CLGATA Trigger: TGCTGTGGCACCCAAACACCAACCAACTGCCTGTCT...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CCA 90 bp | TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAACGCAAGAGAAGTGAATaGCTGCTCCCAGTGCATAGA | + |
Preference number: 4 (lower is better) Translates to: YNDSPLRILLISMSRKLERKRSE*LLPVHR Trigger: TCTATGCACTGGGAGCAGCCATTCACTTCTCTTGCG...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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3UTR CAA 72 bp | CGCAAAACTGCCCAGTGTCTTTGTTCAGGTGACTTCTaGTACCCGTTTGTAAAATTTGTGATATTAGGTGTT | + |
Preference number: 4 (lower is better) Translates to: RKTAQCLCSGDF*YPFVKFVILGV Trigger: AACACCTAATATCACAAATTTTACAAACGGGTACAAGAAGTCACCTGAACAAAGACACTGGGCAGTTTTGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS GCA 90 bp | TCCCATGGTGGTGAGGTAGGTACCCTGAGCCGACCACAGAGGGGCTaGACCCAGGCCCAGCAAGATGGAGGTAGGGATCAGGGTGTACCA | + |
Preference number: 5 (lower is better) Translates to: SHGGEVGTLSRPQRG*TQAQQDGGRDQGVP Trigger: TGGTACACCCTGATCCCTACCTCCATCTTGCTGGGCCTGGGTGCAGCCCCTCTGTGGTCGGCTCAGGGTACCTACCTCACCACCATGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS TCA 90 bp | ACCACAGCCGGTGTAGATGCCCAGCAGTGTGTAGATCAGCTGCTGTaGGGGGTGATGAGTGCTGTTGGTGGCCGCTGGACCCATCAGGCA | + |
Preference number: 5 (lower is better) Translates to: TTAGVDAQQCVDQLL*GVMSAVGGRWTHQA Trigger: TGCCTGATGGGTCCAGCGGCCACCAACAGCACTCATCACCCCTCACAGCAGCTGATCTACACACTGCTGGGCATCTACACCGGCTGTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CCA 90 bp | AGGGTTACCACCAGGGTCAGGAGCCAGAGAGGAAGGCACACACACTaGGAAGGGCCGGCTAGAGGGGCTGTACCAGTTGGCATGGAAGTT | + |
Preference number: 5 (lower is better) Translates to: RVTTRVRSQRGRHTH*EGPARGAVPVGMEV Trigger: AACTTCCATGCCAACTGGTACAGCCCCTCTAGCCGGCCCTTCCCAGTGTGTGTGCCTTCCTCTCTGGCTCCTGACCCTGGTGGTAACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231922.2 |
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CDS-3UTR CAA 90 bp | GTCTATCGCCTGAGCGCTGCTACGTGGACCGCCTCTGCTGACCCAGGCTGGGTTGAAGAAGACAGGCAGTaGGTTGGTGTTTGGGTGCCA | + |
Preference number: 5 (lower is better) Translates to: VYRLSAATWTASADPGWVEEDRQ*VGVWVP Trigger: TGGCACCCAAACACCAACCAACTGCCTGTCTTCTTC...AACCCAGCCTGGGTCAGCAGAGGCGGTCCACGTAGCAGCGCTCAGGCGATAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | ACCCAGGCCCAGCAAGATGGAGGTAGGGATCAGGGTGTACCTGCAGAAAGACCCGAGGGGCTGTACCAGTaGGCATGGAAGTTGCCCAGG | + |
Preference number: 5 (lower is better) Translates to: TQAQQDGGRDQGVPAERPEGLYQ*AWKLPR Trigger: CCTGGGCAACTTCCATGCCAACTGGTACAGCCCCTC...GGGTCTTTCTGCAGGTACACCCTGATCCCTACCTCCATCTTGCTGGGCCTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231922.2 |
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CDS GCA 90 bp | AGATGCCCAGCAGTGTGTAGATCAGCTGCTGTGAGGGGTGATGAGTaGTGTTGGTGGCCGCTGGACCCATCAGGCAGTCTTTGGCTCCAC | + |
Preference number: 5 (lower is better) Translates to: RCPAVCRSAAVRGDE*CWWPLDPSGSLWLH Trigger: GTGGAGCCAAAGACTGCCTGATGGGTCCAGCGGCCACCAACAGCACTCATCACCCCTCACAGCAGCTGATCTACACACTGCTGGGCATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CCA 90 bp | CCAGCAGTGTGTAGATCAGCTGCTGTGAGGGGTGATGAGTGCTGTTaGTGGCCGCTGGACCCATCAGGCAGTCTTTGGCTCCACAGGACA | + |
Preference number: 5 (lower is better) Translates to: PAVCRSAAVRGDECC*WPLDPSGSLWLHRT Trigger: TGTCCTGTGGAGCCAAAGACTGCCTGATGGGTCCAGCGGCCACCAACAGCACTCATCACCCCTCACAGCAGCTGATCTACACACTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CCA 90 bp | GAATGGCTGCTCCCAGTGCATAGAGCGCAGCCCTGCCCGTGTACTTaGAGATCTTCCCATACAGCAGGGAGCACAGTGCAGTCATGGCTG | + |
Preference number: 5 (lower is better) Translates to: EWLLPVHRAQPCPCT*RSSHTAGSTVQSWL Trigger: CAGCCATGACTGCACTGTGCTCCCTGCTGTATGGGAAGATCTCCAAGTACACGGGCAGGGCTGCGCTCTATGCACTGGGAGCAGCCATTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | GTCTATCGCCTGAGCGCTGCTACGTGGACCGCCTCTGCTGACCCAGGCTGGGTTACCTTGGAAGCAGCCTaGACTTCCAGGTACTCAACT | + |
Preference number: 5 (lower is better) Translates to: VYRLSAATWTASADPGWVTLEAA*TSRYST Trigger: AGTTGAGTACCTGGAAGTCAAGGCTGCTTCCAAGGT...AACCCAGCCTGGGTCAGCAGAGGCGGTCCACGTAGCAGCGCTCAGGCGATAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS GCA 90 bp | TGGGTGCCACAGCAGGAAGACCACAACGCAAGAGAAGTGAATGGCTaGTCCCAGTGCATAGAGCGCAGCCCTGCCCGTGTACTTGGAGAT | + |
Preference number: 5 (lower is better) Translates to: WVPQQEDHNAREVNG*SQCIERSPARVLGD Trigger: ATCTCCAAGTACACGGGCAGGGCTGCGCTCTATGCACTGGGAGCAGCCATTCACTTCTCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CCA 90 bp | TGTTTGGGTGCCACAGCAGGAAGACCACAACGCAAGAGAAGTGAATaGCTGCTCCCAGTGCATAGAGCGCAGCCCTGCCCGTGTACTTGG | + |
Preference number: 5 (lower is better) Translates to: CLGATAGRPQRKRSE*LLPVHRAQPCPCTW Trigger: CCAAGTACACGGGCAGGGCTGCGCTCTATGCACTGGGAGCAGCCATTCACTTCTCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCAAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS TCA 90 bp | CTTGGAGATCTTCCCATACAGCAGGGAGCACAGTGCAGTCATGGCTaGGAAGCAGATCATCACGTAGCCCACAAAGTGGATGCCCAGGGC | + |
Preference number: 5 (lower is better) Translates to: LGDLPIQQGAQCSHG*EADHHVAHKVDAQG Trigger: GCCCTGGGCATCCACTTTGTGGGCTACGTGATGATCTGCTTCTCAGCCATGACTGCACTGTGCTCCCTGCTGTATGGGAAGATCTCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS TCA 90 bp | GCACCCACCCAGGCCAGTGATTCCCTCTGTCCTACTCTCAAAAACTaGGGGTACAGGGAATGGGTCGTTGGTCCCTTGCTGGCTGAATCT | + |
Preference number: 5 (lower is better) Translates to: APTQASDSLCPTLKN*GYREWVVGPLLAES Trigger: AGATTCAGCCAGCAAGGGACCAACGACCCATTCCCTGTACCCTCAGTTTTTGAGAGTAGGACAGAGGGAATCACTGGCCTGGGTGGGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231922.2 |
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CDS GCA 90 bp | CAGCAGGAAGACCACAACGCAAGAGAAGTGAATGGCTGCTCCCAGTaGATAGAGCGCAGCCCTGCCCGTGTACTTGGAGATCTTCCCATA | + |
Preference number: 5 (lower is better) Translates to: QQEDHNAREVNGCSQ*IERSPARVLGDLPI Trigger: TATGGGAAGATCTCCAAGTACACGGGCAGGGCTGCGCTCTATGCACTGGGAGCAGCCATTCACTTCTCTTGCGTTGTGGTCTTCCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CCA 90 bp | CCACAGGCCAGAGAGGACGAAGAAGACAGGCAGTTGGTTGGTGTTTaGGTGCCACAGCAGGAAGACCACAACGCAAGAGAAGTGAATGGC | + |
Preference number: 5 (lower is better) Translates to: PQAREDEEDRQLVGV*VPQQEDHNAREVNG Trigger: GCCATTCACTTCTCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCTGGCCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CCA 90 bp | TCAGACATTCCCCACAGGCCAGAGAGGACGAAGAAGACAGGCAGTTaGTTGGTGTTTGGGTGCCACAGCAGGAAGACCACAACGCAAGAG | + |
Preference number: 5 (lower is better) Translates to: SDIPHRPERTKKTGS*LVFGCHSRKTTTQE Trigger: CTCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCTGGCCTGTGGGGAATGTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS GCA 90 bp | TCTTTGGCTCCACAGGACATGAGCTGTTCCTCTGGGATGGCCTCTTaGATGGACATCTTGCCGAACACCAGTGAGGAAATCAGGTTGCCC | + |
Preference number: 5 (lower is better) Translates to: SLAPQDMSCSSGMAS*MDILPNTSEEIRLP Trigger: GGGCAACCTGATTTCCTCACTGGTGTTCGGCAAGATGTCCATGCAAGAGGCCATCCCAGAGGAACAGCTCATGTCCTGTGGAGCCAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CCA 90 bp | ACATTCCCCACAGGCCAGAGAGGACGAAGAAGACAGGCAGTTGGTTaGTGTTTGGGTGCCACAGCAGGAAGACCACAACGCAAGAGAAGT | + |
Preference number: 5 (lower is better) Translates to: TFPTGQRGRRRQAVG*CLGATAGRPQRKRS Trigger: ACTTCTCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCTGGCCTGTGGGGAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CCA 90 bp | TGTACTTGGAGATCTTCCCATACAGCAGGGAGCACAGTGCAGTCATaGCTGAGAAGCAGATCATCACGTAGCCCACAAAGTGGATGCCCA | + |
Preference number: 5 (lower is better) Translates to: CTWRSSHTAGSTVQS*LRSRSSRSPQSGCP Trigger: TGGGCATCCACTTTGTGGGCTACGTGATGATCTGCTTCTCAGCCATGACTGCACTGTGCTCCCTGCTGTATGGGAAGATCTCCAAGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | TTCCTCTTCTGCCTGGTTTTTCTTTTCTGCACCAAGGACCTTGGAAGCAGCCAGCAGTTGGCATGGAAGTaGCCCAGGGAGAAGACCACA | + |
Preference number: 5 (lower is better) Translates to: FLFCLVFLFCTKDLGSSQQLAWK*PREKTT Trigger: TGTGGTCTTCTCCCTGGGCAACTTCCATGCCAACTG...CTGGCTGCTTCCAAGGTCCTTGGTGCAGAAAAGAAAAACCAGGCAGAAGAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231922.2 |
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CDS GCA 90 bp | CAGTCATGGCTGAGAAGCAGATCATCACGTAGCCCACAAAGTGGATaGCCAGGGCACAGGTCACATAAGACTTTGTGTACTCTCCAGAGA | + |
Preference number: 5 (lower is better) Translates to: QSWLRSRSSRSPQSG*PGHRSHKTLCTLQR Trigger: TCTCTGGAGAGTACACAAAGTCTTATGTGACCTGTGCCCTGGGCATCCACTTTGTGGGCTACGTGATGATCTGCTTCTCAGCCATGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | GTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGAACAGTTGGCATGGAAGTaGCCCAGGGAGAAGACCACA | + |
Preference number: 5 (lower is better) Translates to: VSLVATNLSSWDQDLGTEQLAWK*PREKTT Trigger: TGTGGTCTTCTCCCTGGGCAACTTCCATGCCAACTG...TTCAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | TACTGGTTCACCACATCTTTGCCAAGCTTCCCCACCTTTTCCGCTTGCAGATTTTTGCAGCCACACTTCTaGATGAGGATAGGTGGGAGG | + |
Preference number: 5 (lower is better) Translates to: YWFTTSLPSFPTFSACRFLQPHF*MRIGGR Trigger: CCTCCCACCTATCCTCATCAAGAAGTGTGGCTGCAA...AAATCTGCAAGCGGAAAAGGTGGGGAAGCTTGGCAAAGATGTGGTGAACCAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000231922.2 |
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CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATCCCCACCTTTTCCGCTaGCAGATTTCCCATGGTGGT | + |
Preference number: 5 (lower is better) Translates to: VCVCVSVCLSVCVGGRHYPHLFR*QISHGG Trigger: ACCACCATGGGAAATCTGCAAGCGGAAAAGGTGGGG...ATAATGTCTACCTCCTACACAGACAGACAGACAGACAGACACACACACACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | ATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACCCATCAGGCAGTCTTaGGCTCCACAGGACATGAGC | + |
Preference number: 5 (lower is better) Translates to: IMCPWLLLTLVLGTKISGPIRQS*APQDMS Trigger: GCTCATGTCCTGTGGAGCCAAAGACTGCCTGATGGG...TCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATTCTGCACCAAGGACCTaGGAAGCAGCCTTGACTTCC | + |
Preference number: 5 (lower is better) Translates to: VCVCVSVCLSVCVGGRHYSAPRT*EAALTS Trigger: GGAAGTCAAGGCTGCTTCCAAGGTCCTTGGTGCAGA...ATAATGTCTACCTCCTACACAGACAGACAGACAGACAGACACACACACACACAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | GTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGAAAGTGAGGAAATCAGGTaGCCCCACACTCCAGAAGAT | + |
Preference number: 5 (lower is better) Translates to: VSLVATNLSSWDQDLGTESEEIR*PHTPED Trigger: ATCTTCTGGAGTGTGGGGCAACCTGATTTCCTCACT...TTCAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | ATTATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGATTGCAGCCACACTTCTaGATGAGGATAGGTGGGAGG | + |
Preference number: 5 (lower is better) Translates to: IMCPWLLLTLVLGTKISGLQPHF*MRIGGR Trigger: CCTCCCACCTATCCTCATCAAGAAGTGTGGCTGCAA...TCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | ATGTGTCCTTGGTTGCTACTAACCTTAGTTCTTGGGACCAAGATCTCGGGACTGTCCAGAGAGGAACTCTaGTTGAAACCCACTGTACAG | + |
Preference number: 5 (lower is better) Translates to: MCPWLLLTLVLGTKISGLSREEL*LKPTVQ Trigger: CTGTACAGTGGGTTTCAACAAGAGTTCCTCTCTGGA...CAGTCCCGAGATCTTGGTCCCAAGAACTAAGGTTAGTAGCAACCAAGGACACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATACACCGAAAAGAGCATaGTTCTGTGTCTGCCAGACA | + |
Preference number: 5 (lower is better) Translates to: VCVCVSVCLSVCVGGRHYTPKRA*FCVCQT Trigger: TGTCTGGCAGACACAGAACAATGCTCTTTTCGGTGT...ATAATGTCTACCTCCTACACAGACAGACAGACAGACAGACACACACACACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAAGCCCTGCCCGTGTACTaGGAGATCTTCCCATACAGC | + |
Preference number: 5 (lower is better) Translates to: YNDSPLRILLISMSRKLEALPVY*EIFPYS Trigger: GCTGTATGGGAAGATCTCCAAGTACACGGGCAGGGC...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTGTAGGAGGTAGACATTATCCACACTCCAGAAGATaGGAATACCAGGAAAAAGAT | + |
Preference number: 5 (lower is better) Translates to: VCVCVSVCLSVCVGGRHYPHSRR*EYQEKD Trigger: ATCTTTTTCCTGGTATTCCAATCTTCTGGAGTGTGG...ATAATGTCTACCTCCTACACAGACAGACAGACAGACAGACACACACACACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAAGCAGTTGGTTGGTGTTaGGGTGCCACAGCAGGAAGA | + |
Preference number: 5 (lower is better) Translates to: YNDSPLRILLISMSRKLEAVGWC*GATAGR Trigger: TCTTCCTGCTGTGGCACCCAAACACCAACCAACTGC...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | GACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAAATTTGTGCAAAAGCAGGTTCTTaGTTCTCCTCAAACAGGACA | + |
Preference number: 5 (lower is better) Translates to: DSPLRILLISMSRKLEICAKAGS*FSSNRT Trigger: TGTCCTGTTTGAGGAGAACAAAGAACCTGCTTTTGC...ACAAATTTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS-3UTR CAA 90 bp | TATAATGACAGCCCTTTGCGTATCCTTTTGATCTCCATGAGTAGAAAACTAGAAAGGTCACATAAGACTTaGTGTACTCTCCAGAGAGGA | + |
Preference number: 5 (lower is better) Translates to: YNDSPLRILLISMSRKLERSHKT*CTLQRG Trigger: TCCTCTCTGGAGAGTACACAAAGTCTTATGTGACCT...TTCTAGTTTTCTACTCATGGAGATCAAAAGGATACGCAAAGGGCTGTCATTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CCA 72 bp | ACCAGGGTCAGGAGCCAGAGAGGAAGGCACACACACTaGGAAGGGCCGGCTAGAGGGGCTGTACCAGTTGGC | + |
Preference number: 6 (lower is better) Translates to: TRVRSQRGRHTH*EGPARGAVPVG Trigger: GCCAACTGGTACAGCCCCTCTAGCCGGCCCTTCCCAGTGTGTGTGCCTTCCTCTCTGGCTCCTGACCCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231922.2 |
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CDS CCA 72 bp | GCCACAGCAGGAAGACCACAACGCAAGAGAAGTGAATaGCTGCTCCCAGTGCATAGAGCGCAGCCCTGCCCG | + |
Preference number: 6 (lower is better) Translates to: ATAGRPQRKRSE*LLPVHRAQPCP Trigger: CGGGCAGGGCTGCGCTCTATGCACTGGGAGCAGCCATTCACTTCTCTTGCGTTGTGGTCTTCCTGCTGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CCA 72 bp | AGATCAGCTGCTGTGAGGGGTGATGAGTGCTGTTGGTaGCCGCTGGACCCATCAGGCAGTCTTTGGCTCCAC | + |
Preference number: 6 (lower is better) Translates to: RSAAVRGDECCW*PLDPSGSLWLH Trigger: GTGGAGCCAAAGACTGCCTGATGGGTCCAGCGGCCACCAACAGCACTCATCACCCCTCACAGCAGCTGATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CCA 72 bp | CTCCCAGTGCATAGAGCGCAGCCCTGCCCGTGTACTTaGAGATCTTCCCATACAGCAGGGAGCACAGTGCAG | + |
Preference number: 6 (lower is better) Translates to: LPVHRAQPCPCT*RSSHTAGSTVQ Trigger: CTGCACTGTGCTCCCTGCTGTATGGGAAGATCTCCAAGTACACGGGCAGGGCTGCGCTCTATGCACTGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 72 bp | GTGCTGTTGGTGGCCGCTGGACCCATCAGGCAGTCTTaGGCTCCACAGGACATGAGCTGTTCCTCTGGGATG | + |
Preference number: 6 (lower is better) Translates to: VLLVAAGPIRQS*APQDMSCSSGM Trigger: CATCCCAGAGGAACAGCTCATGTCCTGTGGAGCCAAAGACTGCCTGATGGGTCCAGCGGCCACCAACAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS GCA 72 bp | GCAGTGTGTAGATCAGCTGCTGTGAGGGGTGATGAGTaGTGTTGGTGGCCGCTGGACCCATCAGGCAGTCTT | + |
Preference number: 6 (lower is better) Translates to: AVCRSAAVRGDE*CWWPLDPSGSL Trigger: AAGACTGCCTGATGGGTCCAGCGGCCACCAACAGCACTCATCACCCCTCACAGCAGCTGATCTACACACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CCA 72 bp | TGTAGATCAGCTGCTGTGAGGGGTGATGAGTGCTGTTaGTGGCCGCTGGACCCATCAGGCAGTCTTTGGCTC | + |
Preference number: 6 (lower is better) Translates to: CRSAAVRGDECC*WPLDPSGSLWL Trigger: GAGCCAAAGACTGCCTGATGGGTCCAGCGGCCACCAACAGCACTCATCACCCCTCACAGCAGCTGATCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS GCA 72 bp | GACCACAACGCAAGAGAAGTGAATGGCTGCTCCCAGTaGATAGAGCGCAGCCCTGCCCGTGTACTTGGAGAT | + |
Preference number: 6 (lower is better) Translates to: DHNAREVNGCSQ*IERSPARVLGD Trigger: ATCTCCAAGTACACGGGCAGGGCTGCGCTCTATGCACTGGGAGCAGCCATTCACTTCTCTTGCGTTGTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CCA 72 bp | ACAGGCCAGAGAGGACGAAGAAGACAGGCAGTTGGTTaGTGTTTGGGTGCCACAGCAGGAAGACCACAACGC | + |
Preference number: 6 (lower is better) Translates to: TGQRGRRRQAVG*CLGATAGRPQR Trigger: GCGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCTGGCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 72 bp | CACAGGCCAGAGAGGACGAAGAAGACAGGCAGTTGGTaGGTGTTTGGGTGCCACAGCAGGAAGACCACAACG | + |
Preference number: 6 (lower is better) Translates to: HRPERTKKTGSW*VFGCHSRKTTT Trigger: CGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCTGGCCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 90 bp | GACATTCCCCACAGGCCAGAGAGGACGAAGAAGACAGGCAGTTGGTaGGTGTTTGGGTGCCACAGCAGGAAGACCACAACGCAAGAGAAG | + |
Preference number: 6 (lower is better) Translates to: DIPHRPERTKKTGSW*VFGCHSRKTTTQEK Trigger: CTTCTCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCTGGCCTGTGGGGAATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 90 bp | GTCAGACATTCCCCACAGGCCAGAGAGGACGAAGAAGACAGGCAGTaGGTTGGTGTTTGGGTGCCACAGCAGGAAGACCACAACGCAAGA | + |
Preference number: 6 (lower is better) Translates to: VRHSPQAREDEEDRQ*VGVWVPQQEDHNAR Trigger: TCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCTGGCCTGTGGGGAATGTCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CCA 72 bp | GCAGTCTTTGGCTCCACAGGACATGAGCTGTTCCTCTaGGATGGCCTCTTGCATGGACATCTTGCCGAACAC | + |
Preference number: 6 (lower is better) Translates to: AVFGSTGHELFL*DGLLHGHLAEH Trigger: GTGTTCGGCAAGATGTCCATGCAAGAGGCCATCCCAGAGGAACAGCTCATGTCCTGTGGAGCCAAAGACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 90 bp | CAGGACATGAGCTGTTCCTCTGGGATGGCCTCTTGCATGGACATCTaGCCGAACACCAGTGAGGAAATCAGGTTGCCCCACACTCCAGAA | + |
Preference number: 6 (lower is better) Translates to: QDMSCSSGMASCMDI*PNTSEEIRLPHTPE Trigger: TTCTGGAGTGTGGGGCAACCTGATTTCCTCACTGGTGTTCGGCAAGATGTCCATGCAAGAGGCCATCCCAGAGGAACAGCTCATGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS GCA 72 bp | CCACAGGACATGAGCTGTTCCTCTGGGATGGCCTCTTaGATGGACATCTTGCCGAACACCAGTGAGGAAATC | + |
Preference number: 6 (lower is better) Translates to: PQDMSCSSGMAS*MDILPNTSEEI Trigger: GATTTCCTCACTGGTGTTCGGCAAGATGTCCATGCAAGAGGCCATCCCAGAGGAACAGCTCATGTCCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS TCA 72 bp | GATGGCCTCTTGCATGGACATCTTGCCGAACACCAGTaGGGAAATCAGGTTGCCCCACACTCCAGAAGATTG | + |
Preference number: 6 (lower is better) Translates to: DGLLHGHLAEHQ*GNQVAPHSRRL Trigger: CAATCTTCTGGAGTGTGGGGCAACCTGATTTCCTCACTGGTGTTCGGCAAGATGTCCATGCAAGAGGCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CCA 72 bp | AGAGAGGACGAAGAAGACAGGCAGTTGGTTGGTGTTTaGGTGCCACAGCAGGAAGACCACAACGCAAGAGAA | + |
Preference number: 6 (lower is better) Translates to: REDEEDRQLVGV*VPQQEDHNARE Trigger: TTCTCTTGCGTTGTGGTCTTCCTGCTGTGGCACCCAAACACCAACCAACTGCCTGTCTTCTTCGTCCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 90 bp | GCCTCTTGCATGGACATCTTGCCGAACACCAGTGAGGAAATCAGGTaGCCCCACACTCCAGAAGATTGGAATACCAGGAAAAAGATGCCA | + |
Preference number: 6 (lower is better) Translates to: ASCMDILPNTSEEIR*PHTPEDWNTRKKMP Trigger: TGGCATCTTTTTCCTGGTATTCCAATCTTCTGGAGTGTGGGGCAACCTGATTTCCTCACTGGTGTTCGGCAAGATGTCCATGCAAGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 90 bp | CGTAGCCCACAAAGTGGATGCCCAGGGCACAGGTCACATAAGACTTaGTGTACTCTCCAGAGAGGAACTCTTGTTGAAACCCACTGTACA | + |
Preference number: 6 (lower is better) Translates to: RSPQSGCPGHRSHKT*CTLQRGTLVETHCT Trigger: TGTACAGTGGGTTTCAACAAGAGTTCCTCTCTGGAGAGTACACAAAGTCTTATGTGACCTGTGCCCTGGGCATCCACTTTGTGGGCTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 72 bp | ATGGACATCTTGCCGAACACCAGTGAGGAAATCAGGTaGCCCCACACTCCAGAAGATTGGAATACCAGGAAA | + |
Preference number: 6 (lower is better) Translates to: MDILPNTSEEIR*PHTPEDWNTRK Trigger: TTTCCTGGTATTCCAATCTTCTGGAGTGTGGGGCAACCTGATTTCCTCACTGGTGTTCGGCAAGATGTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 72 bp | CAAAGTGGATGCCCAGGGCACAGGTCACATAAGACTTaGTGTACTCTCCAGAGAGGAACTCTTGTTGAAACC | + |
Preference number: 6 (lower is better) Translates to: QSGCPGHRSHKT*CTLQRGTLVET Trigger: GGTTTCAACAAGAGTTCCTCTCTGGAGAGTACACAAAGTCTTATGTGACCTGTGCCCTGGGCATCCACTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 72 bp | TCTTTGTTCTCCTCAAACAGGACACCGAAAAGAGCATaGTTCTGTGTCTGCCAGACAGCGTCAGACATTCCC | + |
Preference number: 6 (lower is better) Translates to: SLFSSNRTPKRA*FCVCQTASDIP Trigger: GGGAATGTCTGACGCTGTCTGGCAGACACAGAACAATGCTCTTTTCGGTGTCCTGTTTGAGGAGAACAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 72 bp | TCTTCTGCCTGGTTTTTCTTTTCTGCACCAAGGACCTaGGAAGCAGCCTTGACTTCCAGGTACTCAACTGTC | + |
Preference number: 6 (lower is better) Translates to: SSAWFFFSAPRT*EAALTSRYSTV Trigger: GACAGTTGAGTACCTGGAAGTCAAGGCTGCTTCCAAGGTCCTTGGTGCAGAAAAGAAAAACCAGGCAGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 90 bp | GGCACAGGTCACATAAGACTTTGTGTACTCTCCAGAGAGGAACTCTaGTTGAAACCCACTGTACAGTGGCAGGAACATCAGGAGACACAA | + |
Preference number: 6 (lower is better) Translates to: GTGHIRLCVLSREEL*LKPTVQWQEHQETQ Trigger: TTGTGTCTCCTGATGTTCCTGCCACTGTACAGTGGGTTTCAACAAGAGTTCCTCTCTGGAGAGTACACAAAGTCTTATGTGACCTGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 90 bp | ACAGGTCACATAAGACTTTGTGTACTCTCCAGAGAGGAACTCTTGTaGAAACCCACTGTACAGTGGCAGGAACATCAGGAGACACAAACG | + |
Preference number: 6 (lower is better) Translates to: TGHIRLCVLSREELL*KPTVQWQEHQETQT Trigger: CGTTTGTGTCTCCTGATGTTCCTGCCACTGTACAGTGGGTTTCAACAAGAGTTCCTCTCTGGAGAGTACACAAAGTCTTATGTGACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 72 bp | CTGTACAGTGGCAGGAACATCAGGAGACACAAACGCTaGTCTCTAAACAGCATGAAGGTTGACAGTAATGTG | + |
Preference number: 6 (lower is better) Translates to: LYSGRNIRRHKR*SLNSMKVDSNV Trigger: CACATTACTGTCAACCTTCATGCTGTTTAGAGACAAGCGTTTGTGTCTCCTGATGTTCCTGCCACTGTACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 72 bp | ATAAGACTTTGTGTACTCTCCAGAGAGGAACTCTTGTaGAAACCCACTGTACAGTGGCAGGAACATCAGGAG | + |
Preference number: 6 (lower is better) Translates to: IRLCVLSREELL*KPTVQWQEHQE Trigger: CTCCTGATGTTCCTGCCACTGTACAGTGGGTTTCAACAAGAGTTCCTCTCTGGAGAGTACACAAAGTCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |
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CDS CAA 72 bp | CACATAAGACTTTGTGTACTCTCCAGAGAGGAACTCTaGTTGAAACCCACTGTACAGTGGCAGGAACATCAG | + |
Preference number: 6 (lower is better) Translates to: HIRLCVLSREEL*LKPTVQWQEHQ Trigger: CTGATGTTCCTGCCACTGTACAGTGGGTTTCAACAAGAGTTCCTCTCTGGAGAGTACACAAAGTCTTATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070059.5 |