RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UNC5D (Mus musculus)

Ensembl gene IDs: ENSMUSG00000063626

Ensembl transcript IDs: ENSMUST00000168630.4, ENSMUST00000209401.2, ENSMUST00000210298.2, ENSMUST00000210785.2, ENSMUST00000211448.2

Found 644 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGTGGTATGAAGCCAAGGCCATGCTTCGCTTAGACCCTCTCCTGTaGCTTGCTCACTCCTTCAGCTTCATGTCCGAGTTAGTGTTCAGC +
Preference number: 1 (lower is better)
Translates to: VWYEAKAMLRLDPLL*LAHSFSFMSELVFS
Trigger: GCTGAACACTAACTCGGACATGAAGCTGAAGGAGTGAGCAAGCCACAGGAGAGGGTCTAAGCGAAGCATGGCCTTGGCTTCATACCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR TCA 90 bp ACACATGGTGTGGCTAGGCAGTCAGAGCACAGAAGTCTCTCTGAATaGTGCGTATGGTTCCTAGGAAAGTGTGGTAGGGTTCTCTTCCTT +
Preference number: 1 (lower is better)
Translates to: THGVARQSEHRSLSE*CVWFLGKCGRVLFL
Trigger: AAGGAAGAGAACCCTACCACACTTTCCTAGGAACCATACGCATCATTCAGAGAGACTTCTGTGCTCTGACTGCCTAGCCACACCATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR TCA 90 bp TTTAGCGCCCAGAGTAATGTGGAAACCTCTTCCAGGATGGGCATTTaGGCTGTGACAGGTGAAAGTCATGCAAAAGCTTGGGGTCACAGT +
Preference number: 1 (lower is better)
Translates to: FSAQSNVETSSRMGI*AVTGESHAKAWGHS
Trigger: ACTGTGACCCCAAGCTTTTGCATGACTTTCACCTGTCACAGCTCAAATGCCCATCCTGGAAGAGGTTTCCACATTACTCTGGGCGCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR GCA 90 bp ACAGTGAGTCATTGCATGTTCAAGTGTGAGCTAAGCCTTGAGACCTaGAGACCCTCCCTGGACACACACAATCCCTTGGTCTGTAAATCT +
Preference number: 1 (lower is better)
Translates to: TVSHCMFKCELSLET*RPSLDTHNPLVCKS
Trigger: AGATTTACAGACCAAGGGATTGTGTGTGTCCAGGGAGGGTCTGCAGGTCTCAAGGCTTAGCTCACACTTGAACATGCAATGACTCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 90 bp AGTAGGCCAGAGAGGCACGTTTTTCAGCTCCTTCCTCATTTCTGCTaGAATAAAGACCTCAGAGAGTGTTGCCTTAGCATGCCTGATAGC +
Preference number: 1 (lower is better)
Translates to: SRPERHVFQLLPHFC*NKDLRECCLSMPDS
Trigger: GCTATCAGGCATGCTAAGGCAACACTCTCTGAGGTCTTTATTCCAGCAGAAATGAGGAAGGAGCTGAAAAACGTGCCTCTCTGGCCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR TCA 90 bp TCTTATTATGATTTCCAACCTCTGGGATGCCAGTCGGTTGGAATCTaGAAATCTGGTCTCAGGATCATCTGGCCCGTGGGGCAAGTCATT +
Preference number: 1 (lower is better)
Translates to: SYYDFQPLGCQSVGI*KSGLRIIWPVGQVI
Trigger: AATGACTTGCCCCACGGGCCAGATGATCCTGAGACCAGATTTTCAGATTCCAACCGACTGGCATCCCAGAGGTTGGAAATCATAATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR TCA 90 bp AGGATCTCTCTAGAGTGTGTTGCAAATAGTTTGTTACCTAACAAGTaGTGCCGATTCTGCCCGCACCCGACCCTACTGTTCATCGTCATC +
Preference number: 1 (lower is better)
Translates to: RISLECVANSLLPNK*CRFCPHPTLLFIVI
Trigger: GATGACGATGAACAGTAGGGTCGGGTGCGGGCAGAATCGGCATCACTTGTTAGGTAACAAACTATTTGCAACACACTCTAGAGAGATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR TCA 90 bp CATTCAGAATTTACACTGATAATACAAGGCACAAAAAGTGTGGTATaGAGCCAAGGCCATGCTTCGCTTAGACCCTCTCCTGTGGCTTGC +
Preference number: 1 (lower is better)
Translates to: HSEFTLIIQGTKSVV*SQGHASLRPSPVAC
Trigger: GCAAGCCACAGGAGAGGGTCTAAGCGAAGCATGGCCTTGGCTTCATACCACACTTTTTGTGCCTTGTATTATCAGTGTAAATTCTGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR GCA 90 bp AAATCAAACAAACAGAACACAAAACCTGAATCTAATGGGGGCAACTaGAGACACATGGGACCAACCTTCATGCTGTTCCTGCTACCTCAC +
Preference number: 1 (lower is better)
Translates to: KSNKQNTKPESNGGN*RHMGPTFMLFLLPH
Trigger: GTGAGGTAGCAGGAACAGCATGAAGGTTGGTCCCATGTGTCTGCAGTTGCCCCCATTAGATTCAGGTTTTGTGTTCTGTTTGTTTGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR GCA 90 bp CTCATTTCTGCTGGAATAAAGACCTCAGAGAGTGTTGCCTTAGCATaGCTGATAGCTCTATCATTCAACACATTTACAGAGGCCAGGCAG +
Preference number: 1 (lower is better)
Translates to: LISAGIKTSESVALA*LIALSFNTFTEARQ
Trigger: CTGCCTGGCCTCTGTAAATGTGTTGAATGATAGAGCTATCAGGCATGCTAAGGCAACACTCTCTGAGGTCTTTATTCCAGCAGAAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 90 bp CAAATACAGCTCTATGACAATGAACACCAAAGGGCTAATAAAATGTaGTCACCATCGGTAAGCCCACGCTTTTGTTCTTGCAGGTGCTGT +
Preference number: 1 (lower is better)
Translates to: QIQLYDNEHQRANKM*SPSVSPRFCSCRCC
Trigger: ACAGCACCTGCAAGAACAAAAGCGTGGGCTTACCGATGGTGACCACATTTTATTAGCCCTTTGGTGTTCATTGTCATAGAGCTGTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR GCA 90 bp CAGCTCCTTCCTCATTTCTGCTGGAATAAAGACCTCAGAGAGTGTTaGCTTAGCATGCCTGATAGCTCTATCATTCAACACATTTACAGA +
Preference number: 1 (lower is better)
Translates to: QLLPHFCWNKDLREC*LSMPDSSIIQHIYR
Trigger: TCTGTAAATGTGTTGAATGATAGAGCTATCAGGCATGCTAAGGCAACACTCTCTGAGGTCTTTATTCCAGCAGAAATGAGGAAGGAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 90 bp CTGCTTTCACTTCTGAAAGCTAGTCTTATTATGATTTCCAACCTCTaGGATGCCAGTCGGTTGGAATCTGAAAATCTGGTCTCAGGATCA +
Preference number: 1 (lower is better)
Translates to: LLSLLKASLIMISNL*DASRLESENLVSGS
Trigger: TGATCCTGAGACCAGATTTTCAGATTCCAACCGACTGGCATCCCAGAGGTTGGAAATCATAATAAGACTAGCTTTCAGAAGTGAAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 90 bp GGACAAAAACAGTGGCAACTATTGAAACGGTGGCCATTCAAGTCTTaGCCCAAAGCATCAATGTTCAAATACAGCTCTATGACAATGAAC +
Preference number: 1 (lower is better)
Translates to: GQKQWQLLKRWPFKS*PKASMFKYSSMTMN
Trigger: GTTCATTGTCATAGAGCTGTATTTGAACATTGATGCTTTGGGCCAAGACTTGAATGGCCACCGTTTCAATAGTTGCCACTGTTTTTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 90 bp AGAAAAACTCTATGCGGACAAAAACAGTGGCAACTATTGAAACGGTaGCCATTCAAGTCTTGGCCCAAAGCATCAATGTTCAAATACAGC +
Preference number: 1 (lower is better)
Translates to: RKTLCGQKQWQLLKR*PFKSWPKASMFKYS
Trigger: GCTGTATTTGAACATTGATGCTTTGGGCCAAGACTTGAATGGCCACCGTTTCAATAGTTGCCACTGTTTTTGTCCGCATAGAGTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 90 bp TCTCCACATTTGAGCAGAATGCTTGTGTTTTGGGAAAGGGTCTTGTaGCATGACATTTGGCTTATTCCCTTTAAATATCATGCATTCATC +
Preference number: 1 (lower is better)
Translates to: SPHLSRMLVFWERVL*HDIWLIPFKYHAFI
Trigger: GATGAATGCATGATATTTAAAGGGAATAAGCCAAATGTCATGCCACAAGACCCTTTCCCAAAACACAAGCATTCTGCTCAAATGTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 90 bp ACATTAGAATTGCTGTCTCCACATTTGAGCAGAATGCTTGTGTTTTaGGAAAGGGTCTTGTGGCATGACATTTGGCTTATTCCCTTTAAA +
Preference number: 1 (lower is better)
Translates to: TLELLSPHLSRMLVF*ERVLWHDIWLIPFK
Trigger: TTTAAAGGGAATAAGCCAAATGTCATGCCACAAGACCCTTTCCCAAAACACAAGCATTCTGCTCAAATGTGGAGACAGCAATTCTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 90 bp AGCAGAATGCTTGTGTTTTGGGAAAGGGTCTTGTGGCATGACATTTaGCTTATTCCCTTTAAATATCATGCATTCATCAGAACTCTAGTT +
Preference number: 1 (lower is better)
Translates to: SRMLVFWERVLWHDI*LIPFKYHAFIRTLV
Trigger: AACTAGAGTTCTGATGAATGCATGATATTTAAAGGGAATAAGCCAAATGTCATGCCACAAGACCCTTTCCCAAAACACAAGCATTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR TCA 90 bp AGCCAAGGCCATGCTTCGCTTAGACCCTCTCCTGTGGCTTGCTCACTCCTTCAGAGGATAGGAGAGAAATaGGTTTTGTCTCGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: SQGHASLRPSPVACSLLQRIGEK*VLSREW
Trigger: CCACTCCCGAGACAAAACTCATTTCTCTCCTATCCT...CTGAAGGAGTGAGCAAGCCACAGGAGAGGGTCTAAGCGAAGCATGGCCTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR CCA 90 bp AACAGCACTCTGACATTAGAGTGGCTTGGCTGGGAACAGAGATTGTTTGTCCTGTGTCTCGGGAGTGGGTaGGTGGGGGATGAAGGTGAG +
Preference number: 2 (lower is better)
Translates to: NSTLTLEWLGWEQRLFVLCLGSG*VGDEGE
Trigger: CTCACCTTCATCCCCCACCCACCCACTCCCGAGACA...CAGGACAAACAATCTCTGTTCCCAGCCAAGCCACTCTAATGTCAGAGTGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR TCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCCCTGTCTTCCCCACTTaGAGCCACTGCTCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFPVFPT*SHCSEA
Trigger: TGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGG...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
3UTR-3UTR TCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGACCTGTCTTCCCCACTTaGAGCCACTGCTCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGPVFPT*SHCSEA
Trigger: TGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGG...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
3UTR CAA 90 bp AAAGCTAGTCTTATTATGATTTCCAACCTCTGGGATGCCAGTCGGTaGGAATCTGAAAATCTGGTCTCAGGATCATCTGGCCCGTGGGGC +
Preference number: 2 (lower is better)
Translates to: KASLIMISNLWDASR*ESENLVSGSSGPWG
Trigger: GCCCCACGGGCCAGATGATCCTGAGACCAGATTTTCAGATTCCAACCGACTGGCATCCCAGAGGTTGGAAATCATAATAAGACTAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR TCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTCCTGTCTTCCCCACTTaGAGCCACTGCTCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFPVFPT*SHCSEA
Trigger: TGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGG...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
3UTR CAA 90 bp AAGCTAAGTAGCTGCCTGGAAGTTAATGTAGGTGGTTGGCTTGGGTaGTCCTCCTTGTGGGCAGTTACTGAAAACTTCCTCCAGAAGAAG +
Preference number: 2 (lower is better)
Translates to: KLSSCLEVNVGGWLG*SSLWAVTENFLQKK
Trigger: CTTCTTCTGGAGGAAGTTTTCAGTAACTGCCCACAAGGAGGACAACCCAAGCCAACCACCTACATTAACTTCCAGGCAGCTACTTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR CCA 90 bp ACCAATCAGACCTGGTTACGAAGAACAGAAATTCTGTTCTTCATGTGGTGTAGACCTGCAGACCCTCCCTaGACACACACAATCCCTTGG +
Preference number: 2 (lower is better)
Translates to: TNQTWLRRTEILFFMWCRPADPP*THTIPW
Trigger: CCAAGGGATTGTGTGTGTCCAGGGAGGGTCTGCAGG...TCTACACCACATGAAGAACAGAATTTCTGTTCTTCGTAACCAGGTCTGATTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CAA 90 bp AGCTGCCTGGAAGTTAATGTAGGTGGTTGGCTTGGGTTGTCCTCCTaGTGGGCAGTTACTGAAAACTTCCTCCAGAAGAAGAGTATATCT +
Preference number: 2 (lower is better)
Translates to: SCLEVNVGGWLGLSS*WAVTENFLQKKSIS
Trigger: AGATATACTCTTCTTCTGGAGGAAGTTTTCAGTAACTGCCCACAAGGAGGACAACCCAAGCCAACCACCTACATTAACTTCCAGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR GCA 90 bp ACCAATCAGACCTGGTTACGAAGAACAGAAATTCTGTTCTTCATGTGGTGTAGACTAAGCCTTGAGACCTaGAGACCCTCCCTGGACACA +
Preference number: 2 (lower is better)
Translates to: TNQTWLRRTEILFFMWCRLSLET*RPSLDT
Trigger: TGTGTCCAGGGAGGGTCTGCAGGTCTCAAGGCTTAG...TCTACACCACATGAAGAACAGAATTTCTGTTCTTCGTAACCAGGTCTGATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR TCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACCCTGTCTTCCCCACTTaGAGCCACTGCTCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYPVFPT*SHCSEA
Trigger: TGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGG...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
3UTR-3UTR CCA 90 bp TGGCCATTCAAGTCTTGGCCCAAAGCATCAATGTTCAAATACAGCTCTATGACAGGATCATCTGGCCCGTaGGGCAAGTCATTAAAAACC +
Preference number: 2 (lower is better)
Translates to: WPFKSWPKASMFKYSSMTGSSGP*GKSLKT
Trigger: GGTTTTTAATGACTTGCCCCACGGGCCAGATGATCC...TGTCATAGAGCTGTATTTGAACATTGATGCTTTGGGCCAAGACTTGAATGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CAA 90 bp AATAGAGTAAGCCTTTCATTCCTGAGCAAAGCAACCCGGGTTCTTTaGATTTGCACACGGCAAAGCCTTTTATGTGATATGGAGGACCTG +
Preference number: 2 (lower is better)
Translates to: NRVSLSFLSKATRVL*ICTRQSLLCDMEDL
Trigger: CAGGTCCTCCATATCACATAAAAGGCTTTGCCGTGTGCAAATCAAAAGAACCCGGGTTGCTTTGCTCAGGAATGAAAGGCTTACTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR TCA 90 bp ATACATGGTAGGTTCGAAGACATGAAGTTGCAACGTTACTGTCTTAGGCCCACTCTTGTGGGCAGTTACTaGAAACTTCCTCCAGAAGAA +
Preference number: 2 (lower is better)
Translates to: IHGRFEDMKLQRYCLRPTLVGSY*KLPPEE
Trigger: TTCTTCTGGAGGAAGTTTTCAGTAACTGCCCACAAG...AGTGGGCCTAAGACAGTAACGTTGCAACTTCATGTCTTCGAACCTACCATGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR CCA 90 bp ATACATGGTAGGTTCGAAGACATGAAGTTGCAACGTTACTGTCTTAGGCCCACTTGCGGACAAAAACAGTaGCAACTATTGAAACGGTGG +
Preference number: 2 (lower is better)
Translates to: IHGRFEDMKLQRYCLRPTCGQKQ*QLLKRW
Trigger: CCACCGTTTCAATAGTTGCCACTGTTTTTGTCCGCA...AGTGGGCCTAAGACAGTAACGTTGCAACTTCATGTCTTCGAACCTACCATGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR TCA 90 bp ACCAATCAGACCTGGTTACGAAGAACAGAAATTCTGTTCTTCATGTGGTGTAGAGCACAGAAGTCTCTCTaGATGATGCGTATGGTTCCT +
Preference number: 2 (lower is better)
Translates to: TNQTWLRRTEILFFMWCRAQKSL*MMRMVP
Trigger: AGGAACCATACGCATCATTCAGAGAGACTTCTGTGC...TCTACACCACATGAAGAACAGAATTTCTGTTCTTCGTAACCAGGTCTGATTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CAA 90 bp CGGACAAAAACAGTGGCAACTATTGAAACGGTGGCCATTCAAGTCTaGGCCCAAAGCATCAATGTTCAAATACAGCTCTATGACAATGAA +
Preference number: 2 (lower is better)
Translates to: RTKTVATIETVAIQV*AQSINVQIQLYDNE
Trigger: TTCATTGTCATAGAGCTGTATTTGAACATTGATGCTTTGGGCCAAGACTTGAATGGCCACCGTTTCAATAGTTGCCACTGTTTTTGTCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR GCA 90 bp TGGCCATTCAAGTCTTGGCCCAAAGCATCAATGTTCAAATACAGCTCTATGACAAGTGTTGCCTTAGCATaGCTGATAGCTCTATCATTC +
Preference number: 2 (lower is better)
Translates to: WPFKSWPKASMFKYSSMTSVALA*LIALSF
Trigger: GAATGATAGAGCTATCAGGCATGCTAAGGCAACACT...TGTCATAGAGCTGTATTTGAACATTGATGCTTTGGGCCAAGACTTGAATGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR GCA 90 bp TGGCCATTCAAGTCTTGGCCCAAAGCATCAATGTTCAAATACAGCTCTATGACACTCCTTCCTCATTTCTaGTGGAATAAAGACCTCAGA +
Preference number: 2 (lower is better)
Translates to: WPFKSWPKASMFKYSSMTLLPHF*WNKDLR
Trigger: TCTGAGGTCTTTATTCCAGCAGAAATGAGGAAGGAG...TGTCATAGAGCTGTATTTGAACATTGATGCTTTGGGCCAAGACTTGAATGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR CCA 90 bp ACCAATCAGACCTGGTTACGAAGAACAGAAATTCTGTTCTTCATGTGGTGTAGATGGAATCTGAAAATCTaGTCTCAGGATCATCTGGCC +
Preference number: 2 (lower is better)
Translates to: TNQTWLRRTEILFFMWCRWNLKI*SQDHLA
Trigger: GGCCAGATGATCCTGAGACCAGATTTTCAGATTCCA...TCTACACCACATGAAGAACAGAATTTCTGTTCTTCGTAACCAGGTCTGATTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR CCA 90 bp ACCAATCAGACCTGGTTACGAAGAACAGAAATTCTGTTCTTCATGTGGTGTAGAGACATTAGAGTGGCTTaGCTGGGAACAGAGATTGTT +
Preference number: 2 (lower is better)
Translates to: TNQTWLRRTEILFFMWCRDIRVA*LGTEIV
Trigger: AACAATCTCTGTTCCCAGCCAAGCCACTCTAATGTC...TCTACACCACATGAAGAACAGAATTTCTGTTCTTCGTAACCAGGTCTGATTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CAA 90 bp AGATATGGCATTCTGACTAAGTCTGTCAGTTCGAAGATGATTCATTaGTTCAATAGAGTAAGCCTTTCATTCCTGAGCAAAGCAACCCGG +
Preference number: 2 (lower is better)
Translates to: RYGILTKSVSSKMIH*FNRVSLSFLSKATR
Trigger: CCGGGTTGCTTTGCTCAGGAATGAAAGGCTTACTCTATTGAACAAATGAATCATCTTCGAACTGACAGACTTAGTCAGAATGCCATATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CAA 90 bp CTGTCTCCACATTTGAGCAGAATGCTTGTGTTTTGGGAAAGGGTCTaGTGGCATGACATTTGGCTTATTCCCTTTAAATATCATGCATTC +
Preference number: 2 (lower is better)
Translates to: LSPHLSRMLVFWERV*WHDIWLIPFKYHAF
Trigger: GAATGCATGATATTTAAAGGGAATAAGCCAAATGTCATGCCACAAGACCCTTTCCCAAAACACAAGCATTCTGCTCAAATGTGGAGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CAA 90 bp CTTCTCTACCTGTCCATGCTGACAATACTTCTAGGTCATGATTTATaGGAGTGTCTGTACCAATCAGACCTGGTTACGAAGAACAGAAAT +
Preference number: 2 (lower is better)
Translates to: LLYLSMLTILLGHDL*ECLYQSDLVTKNRN
Trigger: ATTTCTGTTCTTCGTAACCAGGTCTGATTGGTACAGACACTCCAATAAATCATGACCTAGAAGTATTGTCAGCATGGACAGGTAGAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR GCA 90 bp ATACATGGTAGGTTCGAAGACATGAAGTTGCAACGTTACTGTCTTAGGCCCACTAAAGCAATGAGGAGCTaGCTCAAAAACCACAATTAT +
Preference number: 2 (lower is better)
Translates to: IHGRFEDMKLQRYCLRPTKAMRS*LKNHNY
Trigger: ATAATTGTGGTTTTTGAGGCAGCTCCTCATTGCTTT...AGTGGGCCTAAGACAGTAACGTTGCAACTTCATGTCTTCGAACCTACCATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR CCA 90 bp TGGCCATTCAAGTCTTGGCCCAAAGCATCAATGTTCAAATACAGCTCTATGACAAAATGTTGGAGAACTTaGGTTAATTACCCATCTCCT +
Preference number: 2 (lower is better)
Translates to: WPFKSWPKASMFKYSSMTKCWRT*VNYPSP
Trigger: AGGAGATGGGTAATTAACCCAAGTTCTCCAACATTT...TGTCATAGAGCTGTATTTGAACATTGATGCTTTGGGCCAAGACTTGAATGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR GCA 90 bp TGGCCATTCAAGTCTTGGCCCAAAGCATCAATGTTCAAATACAGCTCTATGACAGATATTATGATCAAGTaGACTTATAAACACAGGCCA +
Preference number: 2 (lower is better)
Translates to: WPFKSWPKASMFKYSSMTDIMIK*TYKHRP
Trigger: TGGCCTGTGTTTATAAGTGCACTTGATCATAATATC...TGTCATAGAGCTGTATTTGAACATTGATGCTTTGGGCCAAGACTTGAATGGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR TCA 72 bp GATTTCCAACCTCTGGGATGCCAGTCGGTTGGAATCTaGAAATCTGGTCTCAGGATCATCTGGCCCGTGGGG +
Preference number: 3 (lower is better)
Translates to: DFQPLGCQSVGI*KSGLRIIWPVG
Trigger: CCCCACGGGCCAGATGATCCTGAGACCAGATTTTCAGATTCCAACCGACTGGCATCCCAGAGGTTGGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 72 bp ACCTCTGGGATGCCAGTCGGTTGGAATCTGAAAATCTaGTCTCAGGATCATCTGGCCCGTGGGGCAAGTCAT +
Preference number: 3 (lower is better)
Translates to: TSGMPVGWNLKI*SQDHLARGASH
Trigger: ATGACTTGCCCCACGGGCCAGATGATCCTGAGACCAGATTTTCAGATTCCAACCGACTGGCATCCCAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 72 bp GGGGCTTCTGTTCTCAGCTTTTCTCCCAGGAAGCCCTaGTGGGTGTGTCCTGGTTATTCTCCATCTTTCCAC +
Preference number: 3 (lower is better)
Translates to: GASVLSFSPRKP*WVCPGYSPSFH
Trigger: GTGGAAAGATGGAGAATAACCAGGACACACCCACCAGGGCTTCCTGGGAGAAAAGCTGAGAACAGAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 72 bp GCTTCTGTTCTCAGCTTTTCTCCCAGGAAGCCCTGGTaGGTGTGTCCTGGTTATTCTCCATCTTTCCACTCC +
Preference number: 3 (lower is better)
Translates to: ASVLSFSPRKPW*VCPGYSPSFHS
Trigger: GGAGTGGAAAGATGGAGAATAACCAGGACACACCCACCAGGGCTTCCTGGGAGAAAAGCTGAGAACAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR CAA 90 bp AGCCAAGGCCATGCTTCGCTTAGACCCTCTCCTGTGGCTTGCTCACTCCTTCAGGACACACACAATCCCTaGGTCTGTAAATCTCACAGA +
Preference number: 3 (lower is better)
Translates to: SQGHASLRPSPVACSLLQDTHNP*VCKSHR
Trigger: TCTGTGAGATTTACAGACCAAGGGATTGTGTGTGTC...CTGAAGGAGTGAGCAAGCCACAGGAGAGGGTCTAAGCGAAGCATGGCCTTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR TCA 72 bp GTGGCTAGGCAGTCAGAGCACAGAAGTCTCTCTGAATaGTGCGTATGGTTCCTAGGAAAGTGTGGTAGGGTT +
Preference number: 3 (lower is better)
Translates to: VARQSEHRSLSE*CVWFLGKCGRV
Trigger: AACCCTACCACACTTTCCTAGGAACCATACGCATCATTCAGAGAGACTTCTGTGCTCTGACTGCCTAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR CAA 90 bp TGGCCATTCAAGTCTTGGCCCAAAGCATCAATGTTCAAATACAGCTCTATGACAGGTGGTTGGCTTGGGTaGTCCTCCTTGTGGGCAGTT +
Preference number: 3 (lower is better)
Translates to: WPFKSWPKASMFKYSSMTGGWLG*SSLWAV
Trigger: AACTGCCCACAAGGAGGACAACCCAAGCCAACCACC...TGTCATAGAGCTGTATTTGAACATTGATGCTTTGGGCCAAGACTTGAATGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR TCA 72 bp CTAGAGTGTGTTGCAAATAGTTTGTTACCTAACAAGTaGTGCCGATTCTGCCCGCACCCGACCCTACTGTTC +
Preference number: 3 (lower is better)
Translates to: LECVANSLLPNK*CRFCPHPTLLF
Trigger: GAACAGTAGGGTCGGGTGCGGGCAGAATCGGCATCACTTGTTAGGTAACAAACTATTTGCAACACACTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR TCA 72 bp ATGTGGAAACCTCTTCCAGGATGGGCATTTGAGCTGTaGCAGGTGAAAGTCATGCAAAAGCTTGGGGTCACA +
Preference number: 3 (lower is better)
Translates to: MWKPLPGWAFEL*QVKVMQKLGVT
Trigger: TGTGACCCCAAGCTTTTGCATGACTTTCACCTGTCACAGCTCAAATGCCCATCCTGGAAGAGGTTTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 72 bp AAGCTAAGTAGCTGCCTGGAAGTTAATGTAGGTGGTTaGCTTGGGTTGTCCTCCTTGTGGGCAGTTACTGAA +
Preference number: 3 (lower is better)
Translates to: KLSSCLEVNVGG*LGLSSLWAVTE
Trigger: TTCAGTAACTGCCCACAAGGAGGACAACCCAAGCCAACCACCTACATTAACTTCCAGGCAGCTACTTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 72 bp CACTTGGGTATTTCCCTGTTATCGAGAAGTTTTCTATaGGAGCAGGAAGCATCTAGGAGAGGCCCTTGTTGG +
Preference number: 3 (lower is better)
Translates to: HLGISLLSRSFL*EQEASRRGPCW
Trigger: CCAACAAGGGCCTCTCCTAGATGCTTCCTGCTCCCATAGAAAACTTCTCGATAACAGGGAAATACCCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR CAA 90 bp ATACATGGTAGGTTCGAAGACATGAAGTTGCAACGTTACTGTCTTAGGCCCACTCTTGGGTTGTCCTCCTaGTGGGCAGTTACTGAAAAC +
Preference number: 3 (lower is better)
Translates to: IHGRFEDMKLQRYCLRPTLGLSS*WAVTEN
Trigger: GTTTTCAGTAACTGCCCACAAGGAGGACAACCCAAG...AGTGGGCCTAAGACAGTAACGTTGCAACTTCATGTCTTCGAACCTACCATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR TCA 72 bp CAGAGTAATGTGGAAACCTCTTCCAGGATGGGCATTTaGGCTGTGACAGGTGAAAGTCATGCAAAAGCTTGG +
Preference number: 3 (lower is better)
Translates to: QSNVETSSRMGI*AVTGESHAKAW
Trigger: CCAAGCTTTTGCATGACTTTCACCTGTCACAGCTCAAATGCCCATCCTGGAAGAGGTTTCCACATTACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR GCA 72 bp AAACAGAACACAAAACCTGAATCTAATGGGGGCAACTaGAGACACATGGGACCAACCTTCATGCTGTTCCTG +
Preference number: 3 (lower is better)
Translates to: KQNTKPESNGGN*RHMGPTFMLFL
Trigger: CAGGAACAGCATGAAGGTTGGTCCCATGTGTCTGCAGTTGCCCCCATTAGATTCAGGTTTTGTGTTCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 72 bp GAGAGGCACGTTTTTCAGCTCCTTCCTCATTTCTGCTaGAATAAAGACCTCAGAGAGTGTTGCCTTAGCATG +
Preference number: 3 (lower is better)
Translates to: ERHVFQLLPHFC*NKDLRECCLSM
Trigger: CATGCTAAGGCAACACTCTCTGAGGTCTTTATTCCAGCAGAAATGAGGAAGGAGCTGAAAAACGTGCCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR CAA 90 bp ATACATGGTAGGTTCGAAGACATGAAGTTGCAACGTTACTGTCTTAGGCCCACTCCACTTGGGAAGAGGTaGCGAGCATTTGTTTTCACA +
Preference number: 3 (lower is better)
Translates to: IHGRFEDMKLQRYCLRPTPLGKR*RAFVFT
Trigger: TGTGAAAACAAATGCTCGCAACCTCTTCCCAAGTGG...AGTGGGCCTAAGACAGTAACGTTGCAACTTCATGTCTTCGAACCTACCATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR CAA 90 bp ATACATGGTAGGTTCGAAGACATGAAGTTGCAACGTTACTGTCTTAGGCCCACTTACAGCCAAACAGCTTaGTCACCGCAGCTAGTGAAA +
Preference number: 3 (lower is better)
Translates to: IHGRFEDMKLQRYCLRPTYSQTA*SPQLVK
Trigger: TTTCACTAGCTGCGGTGACAAAGCTGTTTGGCTGTA...AGTGGGCCTAAGACAGTAACGTTGCAACTTCATGTCTTCGAACCTACCATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR TCA 72 bp TGGTTGGCTTGGGTTGTCCTCCTTGTGGGCAGTTACTaGAAACTTCCTCCAGAAGAAGAGTATATCTGTTCA +
Preference number: 3 (lower is better)
Translates to: WLAWVVLLVGSY*KLPPEEEYICS
Trigger: TGAACAGATATACTCTTCTTCTGGAGGAAGTTTTCAGTAACTGCCCACAAGGAGGACAACCCAAGCCAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR TCA 72 bp ATGAAGTTGCAACGTTACTGTCTTAGGCCCACTTCGTaGGGACACCCCAAATCCATGATCTTCACAGCAAAA +
Preference number: 3 (lower is better)
Translates to: MKLQRYCLRPTS*GHPKSMIFTAK
Trigger: TTTTGCTGTGAAGATCATGGATTTGGGGTGTCCTCACGAAGTGGGCCTAAGACAGTAACGTTGCAACTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR GCA 72 bp AGGCTTTGGGAGTTACTAAGTGTTCAGGTTCTGCAATaGTTCATGAGCAATAGAATGAAAATGGGCCGCGCA +
Preference number: 3 (lower is better)
Translates to: RLWELLSVQVLQ*FMSNRMKMGRA
Trigger: TGCGCGGCCCATTTTCATTCTATTGCTCATGAAGCATTGCAGAACCTGAACACTTAGTAACTCCCAAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 72 bp GTCCTGGTTATTCTCCATCTTTCCACTCCCCATGCTTaGCAACAAAGGAACATTAGAATTGCTGTCTCCACA +
Preference number: 3 (lower is better)
Translates to: VLVILHLSTPHA*QQRNIRIAVST
Trigger: TGTGGAGACAGCAATTCTAATGTTCCTTTGTTGCCAAGCATGGGGAGTGGAAAGATGGAGAATAACCAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR TCA 72 bp TTTACACTGATAATACAAGGCACAAAAAGTGTGGTATaGAGCCAAGGCCATGCTTCGCTTAGACCCTCTCCT +
Preference number: 3 (lower is better)
Translates to: FTLIIQGTKSVV*SQGHASLRPSP
Trigger: AGGAGAGGGTCTAAGCGAAGCATGGCCTTGGCTTCATACCACACTTTTTGTGCCTTGTATTATCAGTGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR GCA 72 bp CCTCATTTCTGCTGGAATAAAGACCTCAGAGAGTGTTaGCTTAGCATGCCTGATAGCTCTATCATTCAACAC +
Preference number: 3 (lower is better)
Translates to: PHFCWNKDLREC*LSMPDSSIIQH
Trigger: GTGTTGAATGATAGAGCTATCAGGCATGCTAAGGCAACACTCTCTGAGGTCTTTATTCCAGCAGAAATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 72 bp CTCTATGACAATGAACACCAAAGGGCTAATAAAATGTaGTCACCATCGGTAAGCCCACGCTTTTGTTCTTGC +
Preference number: 3 (lower is better)
Translates to: LYDNEHQRANKM*SPSVSPRFCSC
Trigger: GCAAGAACAAAAGCGTGGGCTTACCGATGGTGACCACATTTTATTAGCCCTTTGGTGTTCATTGTCATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 72 bp CAGTGGCAACTATTGAAACGGTGGCCATTCAAGTCTTaGCCCAAAGCATCAATGTTCAAATACAGCTCTATG +
Preference number: 3 (lower is better)
Translates to: QWQLLKRWPFKS*PKASMFKYSSM
Trigger: CATAGAGCTGTATTTGAACATTGATGCTTTGGGCCAAGACTTGAATGGCCACCGTTTCAATAGTTGCCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR TCA 72 bp TCTCTACCTGTCCATGCTGACAATACTTCTAGGTCATaGTTTATTGGAGTGTCTGTACCAATCAGACCTGGT +
Preference number: 3 (lower is better)
Translates to: SLPVHADNTSRS*FIGVSVPIRPG
Trigger: ACCAGGTCTGATTGGTACAGACACTCCAATAAATCATGACCTAGAAGTATTGTCAGCATGGACAGGTAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR GCA 72 bp GCTGGAATAAAGACCTCAGAGAGTGTTGCCTTAGCATaGCTGATAGCTCTATCATTCAACACATTTACAGAG +
Preference number: 3 (lower is better)
Translates to: AGIKTSESVALA*LIALSFNTFTE
Trigger: CTCTGTAAATGTGTTGAATGATAGAGCTATCAGGCATGCTAAGGCAACACTCTCTGAGGTCTTTATTCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 72 bp CTTCTGAAAGCTAGTCTTATTATGATTTCCAACCTCTaGGATGCCAGTCGGTTGGAATCTGAAAATCTGGTC +
Preference number: 3 (lower is better)
Translates to: LLKASLIMISNL*DASRLESENLV
Trigger: GACCAGATTTTCAGATTCCAACCGACTGGCATCCCAGAGGTTGGAAATCATAATAAGACTAGCTTTCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR-3UTR CAA 90 bp TGGCCATTCAAGTCTTGGCCCAAAGCATCAATGTTCAAATACAGCTCTATGACATCTCCCTTCTTGATCTaGTCTCTGTTAAGTGACTCA +
Preference number: 3 (lower is better)
Translates to: WPFKSWPKASMFKYSSMTSPFLI*SLLSDS
Trigger: TGAGTCACTTAACAGAGACAAGATCAAGAAGGGAGA...TGTCATAGAGCTGTATTTGAACATTGATGCTTTGGGCCAAGACTTGAATGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 72 bp AATAAGTCATATTATAACAGCACTCTGACATTAGAGTaGCTTGGCTGGGAACAGAGATTGTTTGTCCTGCTC +
Preference number: 3 (lower is better)
Translates to: NKSYYNSTLTLE*LGWEQRLFVLL
Trigger: GAGCAGGACAAACAATCTCTGTTCCCAGCCAAGCCACTCTAATGTCAGAGTGCTGTTATAATATGACTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 72 bp TCAAAGCCTGGGACATCTGTAGTCTATATATTTTCCTaGACCTTGTATAGCCTCTCTTATCAACACTCCATA +
Preference number: 3 (lower is better)
Translates to: SKPGTSVVYIFS*TLYSLSYQHSI
Trigger: TATGGAGTGTTGATAAGAGAGGCTATACAAGGTCCAGGAAAATATATAGACTACAGATGTCCCAGGCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 72 bp GGTTATAACGTCAACCTGAATTTAGGTATTTCCACTTaGGAAGAGGTTGCGAGCATTTGTTTTCACACAAAG +
Preference number: 3 (lower is better)
Translates to: GYNVNLNLGIST*EEVASICFHTK
Trigger: CTTTGTGTGAAAACAAATGCTCGCAACCTCTTCCCAAGTGGAAATACCTAAATTCAGGTTGACGTTATAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 72 bp GTCATGATTTATTGGAGTGTCTGTACCAATCAGACCTaGTTACGAAGAACAGAAATTCTGTTCTTCATGTGG +
Preference number: 3 (lower is better)
Translates to: VMIYWSVCTNQT*LRRTEILFFMW
Trigger: CCACATGAAGAACAGAATTTCTGTTCTTCGTAACCAGGTCTGATTGGTACAGACACTCCAATAAATCATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CCA 72 bp CTTGTGTTTTGGGAAAGGGTCTTGTGGCATGACATTTaGCTTATTCCCTTTAAATATCATGCATTCATCAGA +
Preference number: 3 (lower is better)
Translates to: LVFWERVLWHDI*LIPFKYHAFIR
Trigger: TCTGATGAATGCATGATATTTAAAGGGAATAAGCCAAATGTCATGCCACAAGACCCTTTCCCAAAACACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR GCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGGGGCTGCCGGTTGCTaGTCCACACTCGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAGAAGC*STLGRR
Trigger: CCTTCTCCCGAGTGTGGAGCAGCAACCGGCAGCCCC...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGCAGGGGCTGCCGGTTaGTGCTCCACACTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASAGAAG*CSTLGR
Trigger: TCTCCCGAGTGTGGAGCAGCAACCGGCAGCCCCTGC...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAAACAGCTGGGTGGTGGTaGGCGTGTAGCGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGETAGWW*ACSAPG
Trigger: CCCTGGAGCGCTACACGCCCACCACCACCCAGCTGT...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCACAGTGCAGGGGCTaGCGGTTGCTGCTCCACACT +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAAQCRG*RLLLHT
Trigger: AGTGTGGAGCAGCAACCGGCAGCCCCTGCACTGTGC...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCAGGGAGAAGGCACAGTaGAGGGGCTGCCGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASREKAQ*RGCRLL
Trigger: CAGCAACCGGCAGCCCCTGCACTGTGCCTTCTCCCT...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTAGGGAGAAGGCACAGTaGAGGGGCTGCCGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAREKAQ*RGCRLL
Trigger: CAGCAACCGGCAGCCCCTGCACTGTGCCTTCTCCCT...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCAGGACAGCTGGGTGGTaGTGGGCGTGTAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASRTAGW*WACSAP
Trigger: TGGAGCGCTACACGCCCACCACCACCCAGCTGTCCT...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCTGCAGGACAGCTGGGTaGTGGTGGGCGTGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASCRTAG*WWACSA
Trigger: AGCGCTACACGCCCACCACCACCCAGCTGTCCTGCA...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AGCCAAGGCCATGCTTCGCTTAGACCCTCTCCTGTGGCTTGCTCACTCCTTCAGCCATTCCACCTCTGCTaGTGGAACTCCCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SQGHASLRPSPVACSLLQPFHLC*WNSLWR
Trigger: CCGCCAGAGGGAGTTCCAGCAGCAGAGGTGGAATGG...CTGAAGGAGTGAGCAAGCCACAGGAGAGGGTCTAAGCGAAGCATGGCCTTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR GCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAACCATTCCACCTCTGCTaGTGGAACTCCCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGEPFHLC*WNSLWR
Trigger: CCGCCAGAGGGAGTTCCAGCAGCAGAGGTGGAATGG...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCCCATTCCACCTCTGCTaGTGGAACTCCCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASPFHLC*WNSLWR
Trigger: CCGCCAGAGGGAGTTCCAGCAGCAGAGGTGGAATGG...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AGCCAAGGCCATGCTTCGCTTAGACCCTCTCCTGTGGCTTGCTCACTCCTTCAGTTGTCGAGCGGATCCTaGAGACAGATGGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: SQGHASLRPSPVACSLLQLSSGS*RQMGPL
Trigger: CAGCGGGCCCATCTGTCTGCAGGATCCGCTCGACAA...CTGAAGGAGTGAGCAAGCCACAGGAGAGGGTCTAAGCGAAGCATGGCCTTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR GCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAATTGTCGAGCGGATCCTaGAGACAGATGGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGELSSGS*RQMGPL
Trigger: CAGCGGGCCCATCTGTCTGCAGGATCCGCTCGACAA...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGATCCTGCAGACAGATaGGCCCGCTGTATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSADPADR*ARCMSG
Trigger: GCCGGACATACAGCGGGCCCATCTGTCTGCAGGATC...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGATCCTGCAGACAGATaGGCCCGCTGTATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASDPADR*ARCMSG
Trigger: GCCGGACATACAGCGGGCCCATCTGTCTGCAGGATC...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTCAGCCATTCCACCTCTaGTGCTGGAACTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAQPFHL*CWNSLW
Trigger: CCAGAGGGAGTTCCAGCAGCAGAGGTGGAATGGCTG...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGCACCAGTAGTCCTCTaGCCCATGGAAGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASAPVVL*PMEVLH
Trigger: GTGGAGGACTTCCATGGGCCAGAGGACTACTGGTGC...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAAAGAGGCTCCTCCTCTTaGCCACGATGTTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGERGSSS*PRCWLP
Trigger: TGGCAGCCAACATCGTGGCCAAGAGGAGGAGCCTCT...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCCTTGCCCCCATTTCTTaGGGGTGGAGCTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASLAPIS*GWSCAL
Trigger: GAGTGCACAGCTCCACCCCCAAGAAATGGGGGCAAG...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTAGGAGCTGGCCGCCTTaGTGCCGTTCGTCAGAAATC +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSARSWPP*CRSSEI
Trigger: GATTTCTGACGAACGGCACCAAGGCGGCCAGCTCCT...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGCCTTGCTTTGCACCTaGGTGCAATCGGGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASALLCT*VQSGCS
Trigger: AGAGCAACCCGATTGCACTCAGGTGCAAAGCAAGGC...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTCTCTGGGCTGCAGACTaGCCATTCACTCCACACTTC +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSALWAAD*PFTPHF
Trigger: GAAGTGTGGAGTGAATGGTCAGTCTGCAGCCCAGAG...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAAGTGAGGACTCTGTCATaGGCTCCTTGTCGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGEVRTLS*APCRAD
Trigger: ATCCGCTCGACAAGGAGCTCATGACAGAGTCCTCAC...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTAACCTCAGATCCATCTaGCTGCAGGCTCGGTTCACC +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSANLRSI*LQARFT
Trigger: GGTGAACCGAGCCTGCAGTCAGATGGATCTGAGGTT...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAAGCCGAATGCAGATTTTaGAGGACAGCTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGEAECRF*RTAGWW
Trigger: CCACCACCCAGCTGTCCTGCAAAATCTGCATTCGGC...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCATGCCTTCCTACTCTTaGACGTTCCCAGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASMPSYS*TFPGGS
Trigger: GGAGCCACCTGGGAACGTCCAAGAGTAGGAAGGCAT...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTCTGCACAGTGAGGGATaGTCAGCGCAAAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSALHSEG*SAQREL
Trigger: CAACTCCCTTTGCGCTGACCATCCCTCACTGTGCAG...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCCCCAGAGGTTCAAAATaGCAGCGGAAGGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASPRGSK*QRKGCF
Trigger: AAAGCAGCCCTTCCGCTGTCATTTTGAACCTCTGGG...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTCTGCATGGCTGGCCTTaGTTTGCACCTGAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSALHGWP*FAPECN
Trigger: ATTGCACTCAGGTGCAAAGCAAGGCCAGCCATGCAG...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAAGGCTATGCGCACAGATaGCTTCCTACTCTTGGACGT +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGEGYAHR*LPTLGR
Trigger: ACGTCCAAGAGTAGGAAGGCATCTGTGCGCATAGCC...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGGCCACGATGTTGGCTaGCATACAGGTGTAATTCCC +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAGHDVG*HTGVIP
Trigger: GGGAATTACACCTGTATGGCAGCCAACATCGTGGCC...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGTTCACACTCTGGGCTaGAGACTGACCATTCACTCC +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAVHTLG*RLTIHS
Trigger: GGAGTGAATGGTCAGTCTGCAGCCCAGAGTGTGAAC...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGTTCACACTCTGGGCTaGAGACTGACCATTCACTCC +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASVHTLG*RLTIHS
Trigger: GGAGTGAATGGTCAGTCTGCAGCCCAGAGTGTGAAC...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAAGTTCACACTCTGGGCTaGAGACTGACCATTCACTCC +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGEVHTLG*RLTIHS
Trigger: GGAGTGAATGGTCAGTCTGCAGCCCAGAGTGTGAAC...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGACCTTCACAGAACTTaGCCCCATTTCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSADLHRT*PHFLGV
Trigger: CACCCCCAAGAAATGGGGGCAAGTTCTGTGAAGGTC...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTACAGCCACCTTGAGCTaGTTTACGGCACAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSATATLS*FTAQSV
Trigger: CACAGACTGTGCCGTAAAGCAGCTCAAGGTGGCTGT...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCGCAGGGGCTGCCGGTTaGTGCTCCACACTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFAGAAG*CSTLGR
Trigger: TCTCCCGAGTGTGGAGCAGCAACCGGCAGCCCCTGC...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAACGTTCCAGGGGCAGATaGGATAGAGTCGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGERSRGR*DRVGKN
Trigger: ATTCTTCCCGACTCTATCCCATCTGCCCCTGGAACG...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGAAGATCTGCATGGCTaGCCTTGCTTTGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASEDLHG*PCFAPE
Trigger: CTCAGGTGCAAAGCAAGGCCAGCCATGCAGATCTTC...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTCCTGTTCGGAGTCGATaGGCTCCTCATTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAPVRSR*APHFSA
Trigger: GGCTGAAAAATGAGGAGCCCATCGACTCCGAACAGG...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGCACAGTCTGTGATTaGCTCTCCTGTGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASGTVCD*LSCEGI
Trigger: TATGCCCTCACAGGAGAGCCAATCACAGACTGTGCC...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGAAATGCAGCAGCTTTaGTTCTTCCAGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAEMQQL*FFQELA
Trigger: GGCCAGCTCCTGGAAGAACCAAAGCTGCTGCATTTC...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AACAGCACTCTGACATTAGAGTGGCTTGGCTGGGAACAGAGATTGTTTGTCCTGACAGCTGGGTGGTGGTaGGCGTGTAGCGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: NSTLTLEWLGWEQRLFVLTAGWW*ACSAPG
Trigger: CCCTGGAGCGCTACACGCCCACCACCACCCAGCTGT...CAGGACAAACAATCTCTGTTCCCAGCCAAGCCACTCTAATGTCAGAGTGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR TCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCAATGTTCCAGTGCTCTaGACTGACGTCTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASNVPVL*TDVCTV
Trigger: CACTGTGCAGACGTCAGTTCAGAGCACTGGAACATT...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGGGGCTGCCGGTTGCTaGTCCACACTCGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFGAAGC*STLGRR
Trigger: CCTTCTCCCGAGTGTGGAGCAGCAACCGGCAGCCCC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTGGGGCTGCCGGTTGCTaGTCCACACTCGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFGAAGC*STLGRR
Trigger: CCTTCTCCCGAGTGTGGAGCAGCAACCGGCAGCCCC...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATGCAGGGGCTGCCGGTTaGTGCTCCACACTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDAGAAG*CSTLGR
Trigger: TCTCCCGAGTGTGGAGCAGCAACCGGCAGCCCCTGC...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTAAGCGTCCCCCTAAATaGCCAAAGACACCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAKRPPK*PKTPVV
Trigger: GACAACTGGTGTCTTTGGCCATTTAGGGGGACGCTT...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTTGTGACAAGCATATCTaGAGGCCCACAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSACDKHI*RPTGDF
Trigger: GAAGTCACCTGTGGGCCTCCAGATATGCTTGTCACA...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGGCAGTAACAGGATGTaGACTCATCCTCCACTGACA +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAGSNRM*THPPLT
Trigger: TGTCAGTGGAGGATGAGTCCACATCCTGTTACTGCC...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGCAGTAACAGGATGTaGACTCATCCTCCACTGACA +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASGSNRM*THPPLT
Trigger: TGTCAGTGGAGGATGAGTCCACATCCTGTTACTGCC...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGGACAGCTGGGTGGTaGTGGGCGTGTAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFRTAGW*WACSAP
Trigger: TGGAGCGCTACACGCCCACCACCACCCAGCTGTCCT...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAATGGAGGATCTGTTCATaGCCTTTGAGCTGCCGAATG +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGEWRICS*PLSCRM
Trigger: CATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCA...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCCTTGCCTTTGGCATTTaGGGTATCAAACGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASLAFGI*GIKRGA
Trigger: TGCGCCACGTTTGATACCCCAAATGCCAAAGGCAAG...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTCTTGCCTTTGGCATTTaGGGTATCAAACGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSALAFGI*GIKRGA
Trigger: TGCGCCACGTTTGATACCCCAAATGCCAAAGGCAAG...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAACTTGCCTTTGGCATTTaGGGTATCAAACGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGELAFGI*GIKRGA
Trigger: TGCGCCACGTTTGATACCCCAAATGCCAAAGGCAAG...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTTTTCAGATTCCTGGCTaGGACCTTCACAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAFQIPG*DLHRTC
Trigger: GCAAGTTCTGTGAAGGTCTCAGCCAGGAATCTGAAA...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTATGCAGAAGAGTCAATaGCATCCACTCCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAMQKSQ*HPLRSH
Trigger: GTGACTACGGAGTGGATGTCATTGACTCTTCTGCAT...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCATGCAGAAGAGTCAATaGCATCCACTCCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASMQKSQ*HPLRSH
Trigger: GTGACTACGGAGTGGATGTCATTGACTCTTCTGCAT...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGTCCTCTTCTTCAGGTaGATGTTCCAGTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAVLFFR*MFQCSE
Trigger: TTCAGAGCACTGGAACATTCACCTGAAGAAGAGGAC...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAAGTCCTCTTCTTCAGGTaGATGTTCCAGTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGEVLFFR*MFQCSE
Trigger: TTCAGAGCACTGGAACATTCACCTGAAGAAGAGGAC...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCTCTGTTCATGGCCTTTaGGCTGCCGAATGCAGATTT +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASSVHGL*AAECRF
Trigger: AAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGA...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAACGCTGGCATTCTCAATaGCTCTCCTACTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGERWHSQ*LSYSIF
Trigger: AAAGATGGAGTAGGAGAGGCATTGAGAATGCCAGCG...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR GCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGGCTGCCGGTTGCTaGTCCACACTCGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIAGAAGC*STLGRR
Trigger: CCTTCTCCCGAGTGTGGAGCAGCAACCGGCAGCCCC...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTGGGGCTGCCGGTTGCTaGTCCACACTCGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGGAAGC*STLGRR
Trigger: CCTTCTCCCGAGTGTGGAGCAGCAACCGGCAGCCCC...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTGCACAGTGCAGGGGCTaGCGGTTGCTGCTCCACACT +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFAQCRG*RLLLHT
Trigger: AGTGTGGAGCAGCAACCGGCAGCCCCTGCACTGTGC...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGCACAGTGCAGGGGCTaGCGGTTGCTGCTCCACACT +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFAQCRG*RLLLHT
Trigger: AGTGTGGAGCAGCAACCGGCAGCCCCTGCACTGTGC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGAGCACAGTGCAGGGGCTaGCGGTTGCTGCTCCACACT +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGAQCRG*RLLLHT
Trigger: AGTGTGGAGCAGCAACCGGCAGCCCCTGCACTGTGC...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTAGGGAGAAGGCACAGTaGAGGGGCTGCCGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFREKAQ*RGCRLL
Trigger: CAGCAACCGGCAGCCCCTGCACTGTGCCTTCTCCCT...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTTCATGGCCTTTGAGCTaGCGAATGCAGATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSASWPLS*RMQILQ
Trigger: CTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGA...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTACATCTGCCAGTCCTTaGCTTTGGCATTTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSATSASP*LWHLGY
Trigger: ATACCCCAAATGCCAAAGGCAAGGACTGGCAGATGT...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAATCAGATCTGGCTGCATaGCAGGATTCAGTAGTAGAG +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGESDLAA*QDSVVE
Trigger: CTCTACTACTGAATCCTGCCATGCAGCCAGATCTGA...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTACAGCTGGGTGGTGGTaGGCGTGTAGCGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFTAGWW*ACSAPG
Trigger: CCCTGGAGCGCTACACGCCCACCACCACCCAGCTGT...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGAAGGACAGCTGGGTGGTaGTGGGCGTGTAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGRTAGW*WACSAP
Trigger: TGGAGCGCTACACGCCCACCACCACCCAGCTGTCCT...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCTGCAGGACAGCTGGGTaGTGGTGGGCGTGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFCRTAG*WWACSA
Trigger: AGCGCTACACGCCCACCACCACCCAGCTGTCCTGCA...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCATGGATGTCTGCACTTaGAGGATCTGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASMDVCT*RICSWP
Trigger: AGGCCATGAACAGATCCTCCAAGTGCAGACATCCAT...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGTTCACTCTCTAGGATaGATGTCTGCACTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAVHSLG*MSALGG
Trigger: TCCTCCAAGTGCAGACATCCATCCTAGAGAGTGAAC...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATGACCACCACAGTTGCTaGGAGGCTCCTCCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDDHHSC*EAPPLG
Trigger: GCCAAGAGGAGGAGCCTCTCAGCAACTGTGGTGGTC...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCCTGGAGGCCCACAGGTaGCTTCAGGACTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFLEAHR*LQDSGE
Trigger: TTCTCCTGAGTCCTGAAGTCACCTGTGGGCCTCCAG...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAACTTGTGCGAAGAAAGTaGTGGTTTCTCGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGELVRRK*WFLVHS
Trigger: AGAGTGAACGAGAAACCATCACTTTCTTCGCACAAG...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCCTTGTGCGAAGAAAGTaGTGGTTTCTCGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASLVRRK*WFLVHS
Trigger: AGAGTGAACGAGAAACCATCACTTTCTTCGCACAAG...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAACATTTGAAGAAGATCTaGATGGCTGGCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGEHLKKI*MAGLAL
Trigger: CAAAGCAAGGCCAGCCATGCAGATCTTCTTCAAATG...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTCCATTCCACCTCTGCTaGTGGAACTCCCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFPFHLC*WNSLWR
Trigger: CCGCCAGAGGGAGTTCCAGCAGCAGAGGTGGAATGG...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATGCAGGGGCTGCCGGTTaGTGCTCCACACTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYAGAAG*CSTLGR
Trigger: TCTCCCGAGTGTGGAGCAGCAACCGGCAGCCCCTGC...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTAGGGAGAAGGCACAGTaGAGGGGCTGCCGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFREKAQ*RGCRLL
Trigger: CAGCAACCGGCAGCCCCTGCACTGTGCCTTCTCCCT...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTTCTAGGATGGATGTCTaGACTTGGAGGATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSASRMDV*TWRICS
Trigger: TGAACAGATCCTCCAAGTGCAGACATCCATCCTAGA...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGTACTGTCCTCTTGTaGGAAGAAAGTGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASGTVLL*EESDGF
Trigger: GAAACCATCACTTTCTTCGCACAAGAGGACAGTACC...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGGTACTGTCCTCTTGTaGGAAGAAAGTGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAGTVLL*EESDGF
Trigger: GAAACCATCACTTTCTTCGCACAAGAGGACAGTACC...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCGCACCAGTAGTCCTCTaGCCCATGGAAGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFAPVVL*PMEVLH
Trigger: GTGGAGGACTTCCATGGGCCAGAGGACTACTGGTGC...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCCTGATGATCAAGTTATaGTCAGCCCTGGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASLMIKL*SALVSM
Trigger: CATTGACACCAGGGCTGACCATAACTTGATCATCAG...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATACAGCTGGGTGGTGGTaGGCGTGTAGCGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYTAGWW*ACSAPG
Trigger: CCCTGGAGCGCTACACGCCCACCACCACCCAGCTGT...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAAGCGGAAGGGCTGCTTTaGGTAGCGAAATATGATAAA +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGEAEGLL*VAKYDK
Trigger: TTTATCATATTTCGCTACCCAAAGCAGCCCTTCCGC...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTTGTCAGATAAAGGATTaGAGAGTGAGGACTCTGTCA +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSACQIKD*RVRTLS
Trigger: TGACAGAGTCCTCACTCTTCAATCCTTTATCTGACA...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAATGTCAGATAAAGGATTaGAGAGTGAGGACTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGECQIKD*RVRTLS
Trigger: TGACAGAGTCCTCACTCTTCAATCCTTTATCTGACA...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAACAGGGAAACCATAAATaGGCTCTGGACTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGEQGNHK*ALDFDF
Trigger: AAAGTCAAAGTCCAGAGCTCATTTATGGTTTCCCTG...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAACCTCAGATCCATCTaGCTGCAGGCTCGGTTCACC +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFNLRSI*LQARFT
Trigger: GGTGAACCGAGCCTGCAGTCAGATGGATCTGAGGTT...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGACTGGAGGCCCACAGGTaGCTTCAGGACTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGLEAHR*LQDSGE
Trigger: TTCTCCTGAGTCCTGAAGTCACCTGTGGGCCTCCAG...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAATTTGCCTGCTGTAGTTaGAGTCAGCATCATCAATCT +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGEFACCS*SQHHQS
Trigger: AGATTGATGATGCTGACTTCAACTACAGCAGGCAAA...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTCCATTCCACCTCTGCTaGTGGAACTCCCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGPFHLC*WNSLWR
Trigger: CCGCCAGAGGGAGTTCCAGCAGCAGAGGTGGAATGG...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATCAGCCATTCCACCTCTaGTGCTGGAACTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDQPFHL*CWNSLW
Trigger: CCAGAGGGAGTTCCAGCAGCAGAGGTGGAATGGCTG...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCGTCCGGGAACGTTTCTaGCATCCTCTACCACAGCGA +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFVRERF*HPLPQR
Trigger: TCGCTGTGGTAGAGGATGGCAGAAACGTTCCCGGAC...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS-3UTR GCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGTTGTCGAGCGGATCCTaGAGACAGATGGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIALSSGS*RQMGPL
Trigger: CAGCGGGCCCATCTGTCTGCAGGATCCGCTCGACAA...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTTTGTCGAGCGGATCCTaGAGACAGATGGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGLSSGS*RQMGPL
Trigger: CAGCGGGCCCATCTGTCTGCAGGATCCGCTCGACAA...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGTATTCCCTTTGAAATaGAGCAGCTTTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSAVFPLK*SSFGSS
Trigger: GGAAGAACCAAAGCTGCTGCATTTCAAAGGGAATAC...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AACAGAACACAAAACCTGAATCTAATGGGGGCAACTGCAGACACATGGGACCAAGCACCAGTAGTCCTCTaGCCCATGGAAGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: NRTQNLNLMGATADTWDQAPVVL*PMEVLH
Trigger: GTGGAGGACTTCCATGGGCCAGAGGACTACTGGTGC...TTGGTCCCATGTGTCTGCAGTTGCCCCCATTAGATTCAGGTTTTGTGTTCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGCACCAGTAGTCCTCTaGCCCATGGAAGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFAPVVL*PMEVLH
Trigger: GTGGAGGACTTCCATGGGCCAGAGGACTACTGGTGC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATGCACCAGTAGTCCTCTaGCCCATGGAAGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDAPVVL*PMEVLH
Trigger: GTGGAGGACTTCCATGGGCCAGAGGACTACTGGTGC...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGAAGAGGCTCCTCCTCTTaGCCACGATGTTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGRGSSS*PRCWLP
Trigger: TGGCAGCCAACATCGTGGCCAAGAGGAGGAGCCTCT...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCAGAGGCTCCTCCTCTTaGCCACGATGTTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFRGSSS*PRCWLP
Trigger: TGGCAGCCAACATCGTGGCCAAGAGGAGGAGCCTCT...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGACTTGCCCCCATTTCTTaGGGGTGGAGCTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGLAPIS*GWSCAL
Trigger: GAGTGCACAGCTCCACCCCCAAGAAATGGGGGCAAG...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGATCCTGCAGACAGATaGGCCCGCTGTATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIADPADR*ARCMSG
Trigger: GCCGGACATACAGCGGGCCCATCTGTCTGCAGGATC...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCAGGAGCTGGCCGCCTTaGTGCCGTTCGTCAGAAATC +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFRSWPP*CRSSEI
Trigger: GATTTCTGACGAACGGCACCAAGGCGGCCAGCTCCT...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGGACAGCTGGGTGGTaGTGGGCGTGTAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYRTAGW*WACSAP
Trigger: TGGAGCGCTACACGCCCACCACCACCCAGCTGTCCT...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAAAATTTTGAAGGCTTTTaGGCCAGTCTGTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGENFEGF*ASLCRK
Trigger: TTTCCTGCACAGACTGGCCCAAAAGCCTTCAAAATT...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTAATTTTGAAGGCTTTTaGGCCAGTCTGTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSANFEGF*ASLCRK
Trigger: TTTCCTGCACAGACTGGCCCAAAAGCCTTCAAAATT...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATGCCTTGCTTTGCACCTaGGTGCAATCGGGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDALLCT*VQSGCS
Trigger: AGAGCAACCCGATTGCACTCAGGTGCAAAGCAAGGC...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGAGCCTTGCTTTGCACCTaGGTGCAATCGGGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGALLCT*VQSGCS
Trigger: AGAGCAACCCGATTGCACTCAGGTGCAAAGCAAGGC...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGACTCTGGGCTGCAGACTaGCCATTCACTCCACACTTC +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGLWAAD*PFTPHF
Trigger: GAAGTGTGGAGTGAATGGTCAGTCTGCAGCCCAGAG...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGAGTGAGGACTCTGTCATaGGCTCCTTGTCGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGVRTLS*APCRAD
Trigger: ATCCGCTCGACAAGGAGCTCATGACAGAGTCCTCAC...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTGTGAGGACTCTGTCATaGGCTCCTTGTCGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFVRTLS*APCRAD
Trigger: ATCCGCTCGACAAGGAGCTCATGACAGAGTCCTCAC...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATGGGAAAGTCCCCGAGTaGTTCTTGCCATGGTACTCC +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDGKVPE*FLPWYS
Trigger: GGAGTACCATGGCAAGAATCACTCGGGGACTTTCCC...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGGGAAAGTCCCCGAGTaGTTCTTGCCATGGTACTCC +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFGKVPE*FLPWYS
Trigger: GGAGTACCATGGCAAGAATCACTCGGGGACTTTCCC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTCTGGAGGCCCACAGGTaGCTTCAGGACTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFLEAHR*LQDSGE
Trigger: TTCTCCTGAGTCCTGAAGTCACCTGTGGGCCTCCAG...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTCTGGAGGCCCACAGGTaGCTTCAGGACTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGLEAHR*LQDSGE
Trigger: TTCTCCTGAGTCCTGAAGTCACCTGTGGGCCTCCAG...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTCCAGTGCTCTGAACTaGCGTCTGCACAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFSSALN*RLHSEG
Trigger: TCCCTCACTGTGCAGACGTCAGTTCAGAGCACTGGA...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCTCCAGTGCTCTGAACTaGCGTCTGCACAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFSSALN*RLHSEG
Trigger: TCCCTCACTGTGCAGACGTCAGTTCAGAGCACTGGA...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTTCAGAAATCACTTCCTaGAATGCACAAGGAGTATTG +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSASEITS*NAQGVL
Trigger: CAATACTCCTTGTGCATTTCAGGAAGTGATTTCTGA...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCGGCTATGCGCACAGATaGCTTCCTACTCTTGGACGT +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFGYAHR*LPTLGR
Trigger: ACGTCCAAGAGTAGGAAGGCATCTGTGCGCATAGCC...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCGGCCACGATGTTGGCTaGCATACAGGTGTAATTCCC +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFGHDVG*HTGVIP
Trigger: GGGAATTACACCTGTATGGCAGCCAACATCGTGGCC...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AACAGAACACAAAACCTGAATCTAATGGGGGCAACTGCAGACACATGGGACCAAGTCCGGGAACGTTTCTaGCATCCTCTACCACAGCGA +
Preference number: 4 (lower is better)
Translates to: NRTQNLNLMGATADTWDQVRERF*HPLPQR
Trigger: TCGCTGTGGTAGAGGATGGCAGAAACGTTCCCGGAC...TTGGTCCCATGTGTCTGCAGTTGCCCCCATTAGATTCAGGTTTTGTGTTCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR GCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCACAGCCACCTTGAGCTaGTTTACGGCACAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFTATLS*FTAQSV
Trigger: CACAGACTGTGCCGTAAAGCAGCTCAAGGTGGCTGT...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTAATCACTTCCTGAAATaGACAAGGAGTATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSANHFLK*TRSIVH
Trigger: GTGGACAATACTCCTTGTGCATTTCAGGAAGTGATT...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGCCGAATGCAGATTTTaGAGGACAGCTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFAECRF*RTAGWW
Trigger: CCACCACCCAGCTGTCCTGCAAAATCTGCATTCGGC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCCACACTTCCCAGCTaGCATCCACGTAGACCACCA +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDSTLPS*HPRRPP
Trigger: TGGTGGTCTACGTGGATGGCAGCTGGGAAGTGTGGA...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCTCCACACTTCCCAGCTaGCATCCACGTAGACCACCA +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFSTLPS*HPRRPP
Trigger: TGGTGGTCTACGTGGATGGCAGCTGGGAAGTGTGGA...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCGAAGATCTGCATGGCTaGCCTTGCTTTGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFEDLHG*PCFAPE
Trigger: CTCAGGTGCAAAGCAAGGCCAGCCATGCAGATCTTC...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCATGCCTTCCTACTCTTaGACGTTCCCAGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFMPSYS*TFPGGS
Trigger: GGAGCCACCTGGGAACGTCCAAGAGTAGGAAGGCAT...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGAATGCCTTCCTACTCTTaGACGTTCCCAGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGMPSYS*TFPGGS
Trigger: GGAGCCACCTGGGAACGTCCAAGAGTAGGAAGGCAT...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAAAACCTCCCTGCCTTGTaGATCTTGTTCAAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: PLEATALKQAITSAASGENLPAL*ILFKVF
Trigger: AAAAACTTTGAACAAGATCCACAAGGCAGGGAGGTT...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGAGAGGCTCCTCCTCTTaGCCACGATGTTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIARGSSS*PRCWLP
Trigger: TGGCAGCCAACATCGTGGCCAAGAGGAGGAGCCTCT...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTCTTGCCCCCATTTCTTaGGGGTGGAGCTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGLAPIS*GWSCAL
Trigger: GAGTGCACAGCTCCACCCCCAAGAAATGGGGGCAAG...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGCTTGCCCCCATTTCTTaGGGGTGGAGCTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIALAPIS*GWSCAL
Trigger: GAGTGCACAGCTCCACCCCCAAGAAATGGGGGCAAG...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCGGCACAGTCTGTGATTaGCTCTCCTGTGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFGTVCD*LSCEGI
Trigger: TATGCCCTCACAGGAGAGCCAATCACAGACTGTGCC...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATACATGGTAGGTTCGAAGACATGAAGTTGCAACGTTACTGTCTTAGGCCCACTAGGAGCTGGCCGCCTTaGTGCCGTTCGTCAGAAATC +
Preference number: 4 (lower is better)
Translates to: IHGRFEDMKLQRYCLRPTRSWPP*CRSSEI
Trigger: GATTTCTGACGAACGGCACCAAGGCGGCCAGCTCCT...AGTGGGCCTAAGACAGTAACGTTGCAACTTCATGTCTTCGAACCTACCATGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGAGGAGCTGGCCGCCTTaGTGCCGTTCGTCAGAAATC +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIARSWPP*CRSSEI
Trigger: GATTTCTGACGAACGGCACCAAGGCGGCCAGCTCCT...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCGAAATGCAGCAGCTTTaGTTCTTCCAGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFEMQQL*FFQELA
Trigger: GGCCAGCTCCTGGAAGAACCAAAGCTGCTGCATTTC...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AAAATCAGCGCTTACTCAAAGCCTGGGACATCTGTAGTCTATATATTTTCCTGGTGCAGGACAGCTGGGTaGTGGTGGGCGTGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: KISAYSKPGTSVVYIFSWCRTAG*WWACSA
Trigger: AGCGCTACACGCCCACCACCACCCAGCTGTCCTGCA...CCAGGAAAATATATAGACTACAGATGTCCCAGGCTTTGAGTAAGCGCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CAA 72 bp AGCTGCCTGGAAGTTAATGTAGGTGGTTGGCTTGGGTaGTCCTCCTTGTGGGCAGTTACTGAAAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: SCLEVNVGGWLG*SSLWAVTENFL
Trigger: GAGGAAGTTTTCAGTAACTGCCCACAAGGAGGACAACCCAAGCCAACCACCTACATTAACTTCCAGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR TCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGCCTTGCTTTGCACCTaGGTGCAATCGGGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIAALLCT*VQSGCS
Trigger: AGAGCAACCCGATTGCACTCAGGTGCAAAGCAAGGC...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTGCGAACATTGCAGGCTaGCCACTCTGTCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFANIAG*PLCPGR
Trigger: TCTTCCTGGACAGAGTGGTCAGCCTGCAATGTTCGC...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS-3UTR TCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTCTCTGGGCTGCAGACTaGCCATTCACTCCACACTTC +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGLWAAD*PFTPHF
Trigger: GAAGTGTGGAGTGAATGGTCAGTCTGCAGCCCAGAG...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTGTGAGGACTCTGTCATaGGCTCCTTGTCGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGVRTLS*APCRAD
Trigger: ATCCGCTCGACAAGGAGCTCATGACAGAGTCCTCAC...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGAAAGTCCCCGAGTaGTTCTTGCCATGGTACTCC +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIAGKVPE*FLPWYS
Trigger: GGAGTACCATGGCAAGAATCACTCGGGGACTTTCCC...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCTTCACCTTGGTTGATTaGCATATAAATCTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASFTLVD*HINLPR
Trigger: TCTTGGGAGATTTATATGTCAATCAACCAAGGTGAA...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGTCCAGTGCTCTGAACTaGCGTCTGCACAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIASSALN*RLHSEG
Trigger: TCCCTCACTGTGCAGACGTCAGTTCAGAGCACTGGA...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATCCCAGAGGTTCAAAATaGCAGCGGAAGGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDPRGSK*QRKGCF
Trigger: AAAGCAGCCCTTCCGCTGTCATTTTGAACCTCTGGG...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGACCCAGAGGTTCAAAATaGCAGCGGAAGGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGPRGSK*QRKGCF
Trigger: AAAGCAGCCCTTCCGCTGTCATTTTGAACCTCTGGG...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AACAGAACACAAAACCTGAATCTAATGGGGGCAACTGCAGACACATGGGACCAAGGCTATGCGCACAGATaGCTTCCTACTCTTGGACGT +
Preference number: 4 (lower is better)
Translates to: NRTQNLNLMGATADTWDQGYAHR*LPTLGR
Trigger: ACGTCCAAGAGTAGGAAGGCATCTGTGCGCATAGCC...TTGGTCCCATGTGTCTGCAGTTGCCCCCATTAGATTCAGGTTTTGTGTTCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR GCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGGCTATGCGCACAGATaGCTTCCTACTCTTGGACGT +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFGYAHR*LPTLGR
Trigger: ACGTCCAAGAGTAGGAAGGCATCTGTGCGCATAGCC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATCCACACTTCCCAGCTaGCATCCACAGGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGSTLPS*HPQDKE
Trigger: CTCTTTGTCCTGTGGATGGCAGCTGGGAAGTGTGGA...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS-3UTR GCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGACCTTCACAGAACTTaGCCCCATTTCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFDLHRT*PHFLGV
Trigger: CACCCCCAAGAAATGGGGGCAAGTTCTGTGAAGGTC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGACGTTCCAGGGGCAGATaGGATAGAGTCGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGRSRGR*DRVGKN
Trigger: ATTCTTCCCGACTCTATCCCATCTGCCCCTGGAACG...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTCGTTCCAGGGGCAGATaGGATAGAGTCGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFRSRGR*DRVGKN
Trigger: ATTCTTCCCGACTCTATCCCATCTGCCCCTGGAACG...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATGAAGATCTGCATGGCTaGCCTTGCTTTGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDEDLHG*PCFAPE
Trigger: CTCAGGTGCAAAGCAAGGCCAGCCATGCAGATCTTC...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATGCCTTCCTACTCTTaGACGTTCCCAGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGMPSYS*TFPGGS
Trigger: GGAGCCACCTGGGAACGTCCAAGAGTAGGAAGGCAT...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATCCTGTTCGGAGTCGATaGGCTCCTCATTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDPVRSR*APHFSA
Trigger: GGCTGAAAAATGAGGAGCCCATCGACTCCGAACAGG...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGACCTGTTCGGAGTCGATaGGCTCCTCATTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGPVRSR*APHFSA
Trigger: GGCTGAAAAATGAGGAGCCCATCGACTCCGAACAGG...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCCCTGTTCGGAGTCGATaGGCTCCTCATTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFPVRSR*APHFSA
Trigger: GGCTGAAAAATGAGGAGCCCATCGACTCCGAACAGG...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCCTTGTGGGCAGTTACTGAAAACTTCCTCCAGAAGAAGAGTATATCTGTTCATGATCCTGCAGACAGATaGGCCCGCTGTATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: SLWAVTENFLQKKSISVHDPADR*ARCMSG
Trigger: GCCGGACATACAGCGGGCCCATCTGTCTGCAGGATC...ATGAACAGATATACTCTTCTTCTGGAGGAAGTTTTCAGTAACTGCCCACAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CCA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCAGTGATGACAGATTTTaGATGTACGGCGTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SSPLEATALKQAITSAASSDDRF*MYGVLF
Trigger: AAACAAAACGCCGTACATCCAAAATCTGTCATCACT...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTAGTGATGACAGATTTTaGATGTACGGCGTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: ALSSPLEATALKQAITSASDDRF*MYGVLF
Trigger: AAACAAAACGCCGTACATCCAAAATCTGTCATCACT...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTCTGCACAGTGAGGGATaGTCAGCGCAAAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGLHSEG*SAQREL
Trigger: CAACTCCCTTTGCGCTGACCATCCCTCACTGTGCAG...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGCTGCACAGTGAGGGATaGTCAGCGCAAAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIALHSEG*SAQREL
Trigger: CAACTCCCTTTGCGCTGACCATCCCTCACTGTGCAG...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGAGGCACAGTCTGTGATTaGCTCTCCTGTGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGGTVCD*LSCEGI
Trigger: TATGCCCTCACAGGAGAGCCAATCACAGACTGTGCC...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGGCACAGTCTGTGATTaGCTCTCCTGTGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFGTVCD*LSCEGI
Trigger: TATGCCCTCACAGGAGAGCCAATCACAGACTGTGCC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGAAATGCAGCAGCTTTaGTTCTTCCAGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFEMQQL*FFQELA
Trigger: GGCCAGCTCCTGGAAGAACCAAAGCTGCTGCATTTC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATTCCAGTGCTCTGAACTaGCGTCTGCACAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYSSALN*RLHSEG
Trigger: TCCCTCACTGTGCAGACGTCAGTTCAGAGCACTGGA...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCGTCCTCTTCTTCAGGTaGATGTTCCAGTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFVLFFR*MFQCSE
Trigger: TTCAGAGCACTGGAACATTCACCTGAAGAAGAGGAC...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTCCCAGAGGTTCAAAATaGCAGCGGAAGGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGPRGSK*QRKGCF
Trigger: AAAGCAGCCCTTCCGCTGTCATTTTGAACCTCTGGG...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCTGCTTTGCACCTGAGTaGAATCGGGTTGCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFCFAPE*NRVALD
Trigger: ATCAAGAGCAACCCGATTGCACTCAGGTGCAAAGCA...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCTGGAAGTCCTCCACTTaGTGCCTGGTGACATTGATA +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFWKSST*CLVTLI
Trigger: TATCAATGTCACCAGGCAGCAAGTGGAGGACTTCCA...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTGGCTATGCGCACAGATaGCTTCCTACTCTTGGACGT +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGGYAHR*LPTLGR
Trigger: ACGTCCAAGAGTAGGAAGGCATCTGTGCGCATAGCC...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTTACCACAGCGAACATTaGAGGCTGACCACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGYHSEH*RLTTLS
Trigger: GGACAGAGTGGTCAGCCTGCAATGTTCGCTGTGGTA...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS-3UTR GCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTTCCACACTTCCCAGCTaGCATCCACAGGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGSTLPS*HPQDKE
Trigger: CTCTTTGTCCTGTGGATGGCAGCTGGGAAGTGTGGA...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS-3UTR GCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGTTCACACTCTGGGCTaGAGACTGACCATTCACTCC +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIAVHTLG*RLTIHS
Trigger: GGAGTGAATGGTCAGTCTGCAGCCCAGAGTGTGAAC...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTGACCTTCACAGAACTTaGCCCCATTTCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFDLHRT*PHFLGV
Trigger: CACCCCCAAGAAATGGGGGCAAGTTCTGTGAAGGTC...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACTTGTCGAGCGGATCCTaGAGACAGATGGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYLSSGS*RQMGPL
Trigger: CAGCGGGCCCATCTGTCTGCAGGATCCGCTCGACAA...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGACAGCCACCTTGAGCTaGTTTACGGCACAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIATATLS*FTAQSV
Trigger: CACAGACTGTGCCGTAAAGCAGCTCAAGGTGGCTGT...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCACATCTGCCAGTCCTTaGCTTTGGCATTTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFTSASP*LWHLGY
Trigger: ATACCCCAAATGCCAAAGGCAAGGACTGGCAGATGT...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCCGCTGGCATTCTCAATaGCTAGAATGCAGAGACCAT +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFRWHSQ*LECRDH
Trigger: ATGGTCTCTGCATTCTAGGCATTGAGAATGCCAGCG...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATACATGGTAGGTTCGAAGACATGAAGTTGCAACGTTACTGTCTTAGGCCCACTCGTTCCAGGGGCAGATaGGATAGAGTCGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: IHGRFEDMKLQRYCLRPTRSRGR*DRVGKN
Trigger: ATTCTTCCCGACTCTATCCCATCTGCCCCTGGAACG...AGTGGGCCTAAGACAGTAACGTTGCAACTTCATGTCTTCGAACCTACCATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTGAAGATCTGCATGGCTaGCCTTGCTTTGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGEDLHG*PCFAPE
Trigger: CTCAGGTGCAAAGCAAGGCCAGCCATGCAGATCTTC...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGCCTGTTCGGAGTCGATaGGCTCCTCATTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIAPVRSR*APHFSA
Trigger: GGCTGAAAAATGAGGAGCCCATCGACTCCGAACAGG...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCCTTGTGGGCAGTTACTGAAAACTTCCTCCAGAAGAAGAGTATATCTGTTCATAGAGGCTCCTCCTCTTaGCCACGATGTTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SLWAVTENFLQKKSISVHRGSSS*PRCWLP
Trigger: TGGCAGCCAACATCGTGGCCAAGAGGAGGAGCCTCT...ATGAACAGATATACTCTTCTTCTGGAGGAAGTTTTCAGTAACTGCCCACAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CCA 90 bp AAAATCAGCGCTTACTCAAAGCCTGGGACATCTGTAGTCTATATATTTTCCTGGCTTGCCCCCATTTCTTaGGGGTGGAGCTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: KISAYSKPGTSVVYIFSWLAPIS*GWSCAL
Trigger: GAGTGCACAGCTCCACCCCCAAGAAATGGGGGCAAG...CCAGGAAAATATATAGACTACAGATGTCCCAGGCTTTGAGTAAGCGCTGATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCAAGCGTCCCCCTAAATaGCCAAAGACACCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFKRPPK*PKTPVV
Trigger: GACAACTGGTGTCTTTGGCCATTTAGGGGGACGCTT...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATAAGCGTCCCCCTAAATaGCCAAAGACACCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDKRPPK*PKTPVV
Trigger: GACAACTGGTGTCTTTGGCCATTTAGGGGGACGCTT...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTGTGACAAGCATATCTaGAGGCCCACAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDCDKHI*RPTGDF
Trigger: GAAGTCACCTGTGGGCCTCCAGATATGCTTGTCACA...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATCTGCACAGTGAGGGATaGTCAGCGCAAAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYLHSEG*SAQREL
Trigger: CAACTCCCTTTGCGCTGACCATCCCTCACTGTGCAG...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGGCAGTAACAGGATGTaGACTCATCCTCCACTGACA +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFGSNRM*THPPLT
Trigger: TGTCAGTGGAGGATGAGTCCACATCCTGTTACTGCC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTGGCACAGTCTGTGATTaGCTCTCCTGTGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFGTVCD*LSCEGI
Trigger: TATGCCCTCACAGGAGAGCCAATCACAGACTGTGCC...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTGAAATGCAGCAGCTTTaGTTCTTCCAGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFEMQQL*FFQELA
Trigger: GGCCAGCTCCTGGAAGAACCAAAGCTGCTGCATTTC...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTGGAGGATCTGTTCATaGCCTTTGAGCTGCCGAATG +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDWRICS*PLSCRM
Trigger: CATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCA...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCATGGATGTCTGCACTTaGAGGATCTGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFMDVCT*RICSWP
Trigger: AGGCCATGAACAGATCCTCCAAGTGCAGACATCCAT...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTCTTGCCTTTGGCATTTaGGGTATCAAACGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFLAFGI*GIKRGA
Trigger: TGCGCCACGTTTGATACCCCAAATGCCAAAGGCAAG...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGAGCCAGTCCTTGCCTTTaGCATTTGGGGTATCAAACG +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGASPCL*HLGYQT
Trigger: CGTTTGATACCCCAAATGCCAAAGGCAAGGACTGGC...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTGCCAGTCCTTGCCTTTaGCATTTGGGGTATCAAACG +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFASPCL*HLGYQT
Trigger: CGTTTGATACCCCAAATGCCAAAGGCAAGGACTGGC...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTTCAGATTCCTGGCTaGGACCTTCACAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGFQIPG*DLHRTC
Trigger: GCAAGTTCTGTGAAGGTCTCAGCCAGGAATCTGAAA...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AACAGAACACAAAACCTGAATCTAATGGGGGCAACTGCAGACACATGGGACCAAATGCAGAAGAGTCAATaGCATCCACTCCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: NRTQNLNLMGATADTWDQMQKSQ*HPLRSH
Trigger: GTGACTACGGAGTGGATGTCATTGACTCTTCTGCAT...TTGGTCCCATGTGTCTGCAGTTGCCCCCATTAGATTCAGGTTTTGTGTTCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR TCA 90 bp AAAATCAGCGCTTACTCAAAGCCTGGGACATCTGTAGTCTATATATTTTCCTGGGTGAGGACTCTGTCATaGGCTCCTTGTCGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: KISAYSKPGTSVVYIFSWVRTLS*APCRAD
Trigger: ATCCGCTCGACAAGGAGCTCATGACAGAGTCCTCAC...CCAGGAAAATATATAGACTACAGATGTCCCAGGCTTTGAGTAAGCGCTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR TCA 90 bp TCCTTGTGGGCAGTTACTGAAAACTTCCTCCAGAAGAAGAGTATATCTGTTCATGGGAAAGTCCCCGAGTaGTTCTTGCCATGGTACTCC +
Preference number: 4 (lower is better)
Translates to: SLWAVTENFLQKKSISVHGKVPE*FLPWYS
Trigger: GGAGTACCATGGCAAGAATCACTCGGGGACTTTCCC...ATGAACAGATATACTCTTCTTCTGGAGGAAGTTTTCAGTAACTGCCCACAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR TCA 90 bp AAAATCAGCGCTTACTCAAAGCCTGGGACATCTGTAGTCTATATATTTTCCTGGTCCAGTGCTCTGAACTaGCGTCTGCACAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: KISAYSKPGTSVVYIFSWSSALN*RLHSEG
Trigger: TCCCTCACTGTGCAGACGTCAGTTCAGAGCACTGGA...CCAGGAAAATATATAGACTACAGATGTCCCAGGCTTTGAGTAAGCGCTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR TCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGTCCTCTTCTTCAGGTaGATGTTCCAGTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFVLFFR*MFQCSE
Trigger: TTCAGAGCACTGGAACATTCACCTGAAGAAGAGGAC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCTCTGTTCATGGCCTTTaGGCTGCCGAATGCAGATTT +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFSVHGL*AAECRF
Trigger: AAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGA...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATCTGTTCATGGCCTTTaGGCTGCCGAATGCAGATTT +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGSVHGL*AAECRF
Trigger: AAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGA...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTGCTTTGCACCTGAGTaGAATCGGGTTGCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDCFAPE*NRVALD
Trigger: ATCAAGAGCAACCCGATTGCACTCAGGTGCAAAGCA...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATGGAAGTCCTCCACTTaGTGCCTGGTGACATTGATA +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGWKSST*CLVTLI
Trigger: TATCAATGTCACCAGGCAGCAAGTGGAGGACTTCCA...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACCAGCCATTCCACCTCTaGTGCTGGAACTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYQPFHL*CWNSLW
Trigger: CCAGAGGGAGTTCCAGCAGCAGAGGTGGAATGGCTG...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCCAGGACAAAGAGCAGTaGAGGTTATTTTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFQDKEQ*RLFSAL
Trigger: CAGTGCAGAAAATAACCTGCACTGCTCTTTGTCCTG...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS-3UTR GCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATGACCTTCACAGAACTTaGCCCCATTTCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYDLHRT*PHFLGV
Trigger: CACCCCCAAGAAATGGGGGCAAGTTCTGTGAAGGTC...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AAAATCAGCGCTTACTCAAAGCCTGGGACATCTGTAGTCTATATATTTTCCTGGGCCGAATGCAGATTTTaGAGGACAGCTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KISAYSKPGTSVVYIFSWAECRF*RTAGWW
Trigger: CCACCACCCAGCTGTCCTGCAAAATCTGCATTCGGC...CCAGGAAAATATATAGACTACAGATGTCCCAGGCTTTGAGTAAGCGCTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR GCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCATGGCCTTTGAGCTaGCGAATGCAGATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDSWPLS*RMQILQ
Trigger: CTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGA...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTCATGGCCTTTGAGCTaGCGAATGCAGATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFSWPLS*RMQILQ
Trigger: CTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGA...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCGGTACTGTCCTCTTGTaGGAAGAAAGTGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFGTVLL*EESDGF
Trigger: GAAACCATCACTTTCTTCGCACAAGAGGACAGTACC...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTACATCTGCCAGTCCTTaGCTTTGGCATTTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFTSASP*LWHLGY
Trigger: ATACCCCAAATGCCAAAGGCAAGGACTGGCAGATGT...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATCGTTCCAGGGGCAGATaGGATAGAGTCGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYRSRGR*DRVGKN
Trigger: ATTCTTCCCGACTCTATCCCATCTGCCCCTGGAACG...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTCTTGGCCACGATGTTaGCTGCCATACAGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFSWPRC*LPYRCN
Trigger: ATTACACCTGTATGGCAGCCAACATCGTGGCCAAGA...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCTTGGCCACGATGTTaGCTGCCATACAGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDSWPRC*LPYRCN
Trigger: ATTACACCTGTATGGCAGCCAACATCGTGGCCAAGA...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCCAGTTTTCAGATTCCTaGCTGAGACCTTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFQFSDS*LRPSQN
Trigger: GTTCTGTGAAGGTCTCAGCCAGGAATCTGAAAACTG...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGAACAAAGCAATGTCGCTaGCATTCTCAATGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGTKQCR*HSQCLS
Trigger: GGAGAGGCATTGAGAATGCCAGCGACATTGCTTTGT...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTCAGATCTGGCTGCATaGCAGGATTCAGTAGTAGAG +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFSDLAA*QDSVVE
Trigger: CTCTACTACTGAATCCTGCCATGCAGCCAGATCTGA...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTTGTGACAAGCATATCTaGAGGCCCACAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGCDKHI*RPTGDF
Trigger: GAAGTCACCTGTGGGCCTCCAGATATGCTTGTCACA...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTGTGACAAGCATATCTaGAGGCCCACAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFCDKHI*RPTGDF
Trigger: GAAGTCACCTGTGGGCCTCCAGATATGCTTGTCACA...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTTGGAGGATCTGTTCATaGCCTTTGAGCTGCCGAATG +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGWRICS*PLSCRM
Trigger: CATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCA...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTATGGATGTCTGCACTTaGAGGATCTGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFMDVCT*RICSWP
Trigger: AGGCCATGAACAGATCCTCCAAGTGCAGACATCCAT...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCATGGATGTCTGCACTTaGAGGATCTGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFMDVCT*RICSWP
Trigger: AGGCCATGAACAGATCCTCCAAGTGCAGACATCCAT...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGTTCACTCTCTAGGATaGATGTCTGCACTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFVHSLG*MSALGG
Trigger: TCCTCCAAGTGCAGACATCCATCCTAGAGAGTGAAC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTGCCAGTCCTTGCCTTTaGCATTTGGGGTATCAAACG +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGASPCL*HLGYQT
Trigger: CGTTTGATACCCCAAATGCCAAAGGCAAGGACTGGC...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCACAAAGCAATGTCGCTaGCATTCTCAATGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFTKQCR*HSQCFG
Trigger: CCCAAAGCATTGAGAATGCCAGCGACATTGCTTTGT...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
3UTR CAA 72 bp GAAGTTAATGTAGGTGGTTGGCTTGGGTTGTCCTCCTaGTGGGCAGTTACTGAAAACTTCCTCCAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: EVNVGGWLGLSS*WAVTENFLQKK
Trigger: CTTCTTCTGGAGGAAGTTTTCAGTAACTGCCCACAAGGAGGACAACCCAAGCCAACCACCTACATTAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR TCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACCTCTGGGCTGCAGACTaGCCATTCACTCCACACTTC +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYLWAAD*PFTPHF
Trigger: GAAGTGTGGAGTGAATGGTCAGTCTGCAGCCCAGAG...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTTTTCAGATTCCTGGCTaGGACCTTCACAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGFQIPG*DLHRTC
Trigger: GCAAGTTCTGTGAAGGTCTCAGCCAGGAATCTGAAA...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATGCAGAAGAGTCAATaGCATCCACTCCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGMQKSQ*HPLRSH
Trigger: GTGACTACGGAGTGGATGTCATTGACTCTTCTGCAT...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCCAGGGAAACCATAAATaGGCTCTGGACTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFQGNHK*ALDFDF
Trigger: AAAGTCAAAGTCCAGAGCTCATTTATGGTTTCCCTG...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACGGGAAAGTCCCCGAGTaGTTCTTGCCATGGTACTCC +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYGKVPE*FLPWYS
Trigger: GGAGTACCATGGCAAGAATCACTCGGGGACTTTCCC...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTGGGATGTATTGTACTaGATCCGCGGTTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFWDVLY*IRGCFH
Trigger: ATGGAAACAACCGCGGATTCAGTACAATACATCCCA...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCTGGGATGTATTGTACTaGATCCGCGGTTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFWDVLY*IRGCFH
Trigger: ATGGAAACAACCGCGGATTCAGTACAATACATCCCA...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATGGGATGTATTGTACTaGATCCGCGGTTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGWDVLY*IRGCFH
Trigger: ATGGAAACAACCGCGGATTCAGTACAATACATCCCA...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACAACCTCAGATCCATCTaGCTGCAGGCTCGGTTCACC +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYNLRSI*LQARFT
Trigger: GGTGAACCGAGCCTGCAGTCAGATGGATCTGAGGTT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAATGTTCCAGTGCTCTaGACTGACGTCTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYNVPVL*TDVCTV
Trigger: CACTGTGCAGACGTCAGTTCAGAGCACTGGAACATT...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCTGTTCATGGCCTTTaGGCTGCCGAATGCAGATTT +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFSVHGL*AAECRF
Trigger: AAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGA...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTTCTGTTCATGGCCTTTaGGCTGCCGAATGCAGATTT +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGSVHGL*AAECRF
Trigger: AAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGA...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCCTTGTGCGAAGAAAGTaGTGGTTTCTCGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFLVRRK*WFLVHS
Trigger: AGAGTGAACGAGAAACCATCACTTTCTTCGCACAAG...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGACTTGTGCGAAGAAAGTaGTGGTTTCTCGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGLVRRK*WFLVHS
Trigger: AGAGTGAACGAGAAACCATCACTTTCTTCGCACAAG...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ACCAATCAGACCTGGTTACGAAGAACAGAAATTCTGTTCTTCATGTGGTGTAGACCCAGAGGTTCAAAATaGCAGCGGAAGGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TNQTWLRRTEILFFMWCRPRGSK*QRKGCF
Trigger: AAAGCAGCCCTTCCGCTGTCATTTTGAACCTCTGGG...TCTACACCACATGAAGAACAGAATTTCTGTTCTTCGTAACCAGGTCTGATTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR GCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATCATTTGAAGAAGATCTaGATGGCTGGCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDHLKKI*MAGLAL
Trigger: CAAAGCAAGGCCAGCCATGCAGATCTTCTTCAAATG...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCCATTTGAAGAAGATCTaGATGGCTGGCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFHLKKI*MAGLAL
Trigger: CAAAGCAAGGCCAGCCATGCAGATCTTCTTCAAATG...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTTGGAAGTCCTCCACTTaGTGCCTGGTGACATTGATA +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGWKSST*CLVTLI
Trigger: TATCAATGTCACCAGGCAGCAAGTGGAGGACTTCCA...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGTGGAAGTCCTCCACTTaGTGCCTGGTGACATTGATA +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIAWKSST*CLVTLI
Trigger: TATCAATGTCACCAGGCAGCAAGTGGAGGACTTCCA...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AAATGTAAACTACTCAGACTGTGTATGTGGAGTGGTAGAGACTGTAAATTAACGCAGCCATTCCACCTCTaGTGCTGGAACTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KCKLLRLCMWSGRDCKLTQPFHL*CWNSLW
Trigger: CCAGAGGGAGTTCCAGCAGCAGAGGTGGAATGGCTG...CGTTAATTTACAGTCTCTACCACTCCACATACACAGTCTGAGTAGTTTACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR GCA 90 bp AAAATCAGCGCTTACTCAAAGCCTGGGACATCTGTAGTCTATATATTTTCCTGGGGCCACGATGTTGGCTaGCATACAGGTGTAATTCCC +
Preference number: 4 (lower is better)
Translates to: KISAYSKPGTSVVYIFSWGHDVG*HTGVIP
Trigger: GGGAATTACACCTGTATGGCAGCCAACATCGTGGCC...CCAGGAAAATATATAGACTACAGATGTCCCAGGCTTTGAGTAAGCGCTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR GCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCGTGCAGGTTATTTTCTaGACTGACATTCCCTCACAA +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFVQVIF*TDIPSQ
Trigger: TTGTGAGGGAATGTCAGTGCAGAAAATAACCTGCAC...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS-3UTR GCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGACAGGACAAAGAGCAGTaGAGGTTATTTTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGQDKEQ*RLFSAL
Trigger: CAGTGCAGAAAATAACCTGCACTGCTCTTTGTCCTG...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS-3UTR GCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACGCCGAATGCAGATTTTaGAGGACAGCTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYAECRF*RTAGWW
Trigger: CCACCACCCAGCTGTCCTGCAAAATCTGCATTCGGC...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTCTAGGATGGATGTCTaGACTTGGAGGATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFSRMDV*TWRICS
Trigger: TGAACAGATCCTCCAAGTGCAGACATCCATCCTAGA...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCAGTTATGGTCAGCCCTaGTGTCAATGTTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFSYGQP*CQCSHP
Trigger: AGGATGAGAACATTGACACCAGGGCTGACCATAACT...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTCTGATGATCAAGTTATaGTCAGCCCTGGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFLMIKL*SALVSM
Trigger: CATTGACACCAGGGCTGACCATAACTTGATCATCAG...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGTCTTGGCCACGATGTTaGCTGCCATACAGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIASWPRC*LPYRCN
Trigger: ATTACACCTGTATGGCAGCCAACATCGTGGCCAAGA...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCCAGTTTTCAGATTCCTaGCTGAGACCTTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFQFSDS*LRPSQN
Trigger: GTTCTGTGAAGGTCTCAGCCAGGAATCTGAAAACTG...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCTTGAAGTTGAAGGTCTaGAAGCCACCTGTCAATGCA +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFLKLKV*KPPVNA
Trigger: TGCATTGACAGGTGGCTTCCAGACCTTCAACTTCAA...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000168630.4
ENSMUST00000210298.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGTCAGATCTGGCTGCATaGCAGGATTCAGTAGTAGAG +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIASDLAA*QDSVVE
Trigger: CTCTACTACTGAATCCTGCCATGCAGCCAGATCTGA...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATGGCAGTAACAGGATGTaGACTCATCCTCCACTGACA +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYGSNRM*THPPLT
Trigger: TGTCAGTGGAGGATGAGTCCACATCCTGTTACTGCC...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATTGGAGGATCTGTTCATaGCCTTTGAGCTGCCGAATG +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYWRICS*PLSCRM
Trigger: CATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCA...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGATGGATGTCTGCACTTaGAGGATCTGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIAMDVCT*RICSWP
Trigger: AGGCCATGAACAGATCCTCCAAGTGCAGACATCCAT...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTGTTCACTCTCTAGGATaGATGTCTGCACTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGVHSLG*MSALGG
Trigger: TCCTCCAAGTGCAGACATCCATCCTAGAGAGTGAAC...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTGTTCACTCTCTAGGATaGATGTCTGCACTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFVHSLG*MSALGG
Trigger: TCCTCCAAGTGCAGACATCCATCCTAGAGAGTGAAC...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAATTTTGAAGGCTTTTaGGCCAGTCTGTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFNFEGF*ASLCRK
Trigger: TTTCCTGCACAGACTGGCCCAAAAGCCTTCAAAATT...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGCGGAAGGGCTGCTTTaGGTAGCGAAATATGATAAA +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFAEGLL*VAKYDK
Trigger: TTTATCATATTTCGCTACCCAAAGCAGCCCTTCCGC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTGCGGAAGGGCTGCTTTaGGTAGCGAAATATGATAAA +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFAEGLL*VAKYDK
Trigger: TTTATCATATTTCGCTACCCAAAGCAGCCCTTCCGC...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AAATGTAAACTACTCAGACTGTGTATGTGGAGTGGTAGAGACTGTAAATTAACGGCGAACATTGCAGGCTaGCCACTCTGTCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: KCKLLRLCMWSGRDCKLTANIAG*PLCPGR
Trigger: TCTTCCTGGACAGAGTGGTCAGCCTGCAATGTTCGC...CGTTAATTTACAGTCTCTACCACTCCACATACACAGTCTGAGTAGTTTACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR TCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATGTCAGATAAAGGATTaGAGAGTGAGGACTCTGTCA +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGCQIKD*RVRTLS
Trigger: TGACAGAGTCCTCACTCTTCAATCCTTTATCTGACA...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTCAGGGAAACCATAAATaGGCTCTGGACTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFQGNHK*ALDFDF
Trigger: AAAGTCAAAGTCCAGAGCTCATTTATGGTTTCCCTG...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGTGGGATGTATTGTACTaGATCCGCGGTTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIAWDVLY*IRGCFH
Trigger: ATGGAAACAACCGCGGATTCAGTACAATACATCCCA...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTTTGCCTGCTGTAGTTaGAGTCAGCATCATCAATCT +
Preference number: 4 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDFACCS*SQHHQS
Trigger: AGATTGATGATGCTGACTTCAACTACAGCAGGCAAA...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TGGCCATTCAAGTCTTGGCCCAAAGCATCAATGTTCAAATACAGCTCTATGACATGCTTTGCACCTGAGTaGAATCGGGTTGCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: WPFKSWPKASMFKYSSMTCFAPE*NRVALD
Trigger: ATCAAGAGCAACCCGATTGCACTCAGGTGCAAAGCA...TGTCATAGAGCTGTATTTGAACATTGATGCTTTGGGCCAAGACTTGAATGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR GCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATTGCTTTGCACCTGAGTaGAATCGGGTTGCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYCFAPE*NRVALD
Trigger: ATCAAGAGCAACCCGATTGCACTCAGGTGCAAAGCA...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACGGCCACGATGTTGGCTaGCATACAGGTGTAATTCCC +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYGHDVG*HTGVIP
Trigger: GGGAATTACACCTGTATGGCAGCCAACATCGTGGCC...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACACAGCCACCTTGAGCTaGTTTACGGCACAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYTATLS*FTAQSV
Trigger: CACAGACTGTGCCGTAAAGCAGCTCAAGGTGGCTGT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATTCATGGCCTTTGAGCTaGCGAATGCAGATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYSWPLS*RMQILQ
Trigger: CTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGA...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ATACATGGTAGGTTCGAAGACATGAAGTTGCAACGTTACTGTCTTAGGCCCACTGGTACTGTCCTCTTGTaGGAAGAAAGTGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: IHGRFEDMKLQRYCLRPTGTVLL*EESDGF
Trigger: GAAACCATCACTTTCTTCGCACAAGAGGACAGTACC...AGTGGGCCTAAGACAGTAACGTTGCAACTTCATGTCTTCGAACCTACCATGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR GCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTGGTACTGTCCTCTTGTaGGAAGAAAGTGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFGTVLL*EESDGF
Trigger: GAAACCATCACTTTCTTCGCACAAGAGGACAGTACC...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATACATCTGCCAGTCCTTaGCTTTGGCATTTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYTSASP*LWHLGY
Trigger: ATACCCCAAATGCCAAAGGCAAGGACTGGCAGATGT...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGAGTTATGGTCAGCCCTaGTGTCAATGTTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIASYGQP*CQCSHP
Trigger: AGGATGAGAACATTGACACCAGGGCTGACCATAACT...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTAGTTATGGTCAGCCCTaGTGTCAATGTTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGSYGQP*CQCSHP
Trigger: AGGATGAGAACATTGACACCAGGGCTGACCATAACT...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTAGTTATGGTCAGCCCTaGTGTCAATGTTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFSYGQP*CQCSHP
Trigger: AGGATGAGAACATTGACACCAGGGCTGACCATAACT...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTCTGATGATCAAGTTATaGTCAGCCCTGGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGLMIKL*SALVSM
Trigger: CATTGACACCAGGGCTGACCATAACTTGATCATCAG...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTCAGTTTTCAGATTCCTaGCTGAGACCTTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGQFSDS*LRPSQN
Trigger: GTTCTGTGAAGGTCTCAGCCAGGAATCTGAAAACTG...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTCAGTTTTCAGATTCCTaGCTGAGACCTTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFQFSDS*LRPSQN
Trigger: GTTCTGTGAAGGTCTCAGCCAGGAATCTGAAAACTG...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGTTGAAGTTGAAGGTCTaGAAGCCACCTGTCAATGCA +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIALKLKV*KPPVNA
Trigger: TGCATTGACAGGTGGCTTCCAGACCTTCAACTTCAA...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168630.4
ENSMUST00000210298.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATTCAGATCTGGCTGCATaGCAGGATTCAGTAGTAGAG +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYSDLAA*QDSVVE
Trigger: CTCTACTACTGAATCCTGCCATGCAGCCAGATCTGA...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AAAATCAGCGCTTACTCAAAGCCTGGGACATCTGTAGTCTATATATTTTCCTGGAAGCGTCCCCCTAAATaGCCAAAGACACCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: KISAYSKPGTSVVYIFSWKRPPK*PKTPVV
Trigger: GACAACTGGTGTCTTTGGCCATTTAGGGGGACGCTT...CCAGGAAAATATATAGACTACAGATGTCCCAGGCTTTGAGTAAGCGCTGATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CCA 90 bp AAAATCAGCGCTTACTCAAAGCCTGGGACATCTGTAGTCTATATATTTTCCTGGCTTGCCTTTGGCATTTaGGGTATCAAACGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: KISAYSKPGTSVVYIFSWLAFGI*GIKRGA
Trigger: TGCGCCACGTTTGATACCCCAAATGCCAAAGGCAAG...CCAGGAAAATATATAGACTACAGATGTCCCAGGCTTTGAGTAAGCGCTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTACAAAGCAATGTCGCTaGCATTCTCAATGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFTKQCR*HSQCFG
Trigger: CCCAAAGCATTGAGAATGCCAGCGACATTGCTTTGT...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
3UTR CAA 72 bp AGCCTTTCATTCCTGAGCAAAGCAACCCGGGTTCTTTaGATTTGCACACGGCAAAGCCTTTTATGTGATATG +
Preference number: 4 (lower is better)
Translates to: SLSFLSKATRVL*ICTRQSLLCDM
Trigger: CATATCACATAAAAGGCTTTGCCGTGTGCAAATCAAAAGAACCCGGGTTGCTTTGCTCAGGAATGAAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR TCA 90 bp TCCTTGTGGGCAGTTACTGAAAACTTCCTCCAGAAGAAGAGTATATCTGTTCATTTTCAGATTCCTGGCTaGGACCTTCACAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: SLWAVTENFLQKKSISVHFQIPG*DLHRTC
Trigger: GCAAGTTCTGTGAAGGTCTCAGCCAGGAATCTGAAA...ATGAACAGATATACTCTTCTTCTGGAGGAAGTTTTCAGTAACTGCCCACAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR TCA 90 bp ATACATGGTAGGTTCGAAGACATGAAGTTGCAACGTTACTGTCTTAGGCCCACTTGTCAGATAAAGGATTaGAGAGTGAGGACTCTGTCA +
Preference number: 4 (lower is better)
Translates to: IHGRFEDMKLQRYCLRPTCQIKD*RVRTLS
Trigger: TGACAGAGTCCTCACTCTTCAATCCTTTATCTGACA...AGTGGGCCTAAGACAGTAACGTTGCAACTTCATGTCTTCGAACCTACCATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR TCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTGTCAGATAAAGGATTaGAGAGTGAGGACTCTGTCA +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFCQIKD*RVRTLS
Trigger: TGACAGAGTCCTCACTCTTCAATCCTTTATCTGACA...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTCAGGGAAACCATAAATaGGCTCTGGACTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGQGNHK*ALDFDF
Trigger: AAAGTCAAAGTCCAGAGCTCATTTATGGTTTCCCTG...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATTGGGATGTATTGTACTaGATCCGCGGTTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYWDVLY*IRGCFH
Trigger: ATGGAAACAACCGCGGATTCAGTACAATACATCCCA...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACAATGTTCCAGTGCTCTaGACTGACGTCTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYNVPVL*TDVCTV
Trigger: CACTGTGCAGACGTCAGTTCAGAGCACTGGAACATT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AAAATCAGCGCTTACTCAAAGCCTGGGACATCTGTAGTCTATATATTTTCCTGGGTCCTCTTCTTCAGGTaGATGTTCCAGTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: KISAYSKPGTSVVYIFSWVLFFR*MFQCSE
Trigger: TTCAGAGCACTGGAACATTCACCTGAAGAAGAGGAC...CCAGGAAAATATATAGACTACAGATGTCCCAGGCTTTGAGTAAGCGCTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR TCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCTCAGAAATCACTTCCTaGAATGCACAAGGAGTATTG +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFSEITS*NAQGVL
Trigger: CAATACTCCTTGTGCATTTCAGGAAGTGATTTCTGA...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTTTGCCTGCTGTAGTTaGAGTCAGCATCATCAATCT +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFFACCS*SQHHQS
Trigger: AGATTGATGATGCTGACTTCAACTACAGCAGGCAAA...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATCATTTGAAGAAGATCTaGATGGCTGGCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYHLKKI*MAGLAL
Trigger: CAAAGCAAGGCCAGCCATGCAGATCTTCTTCAAATG...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTAATCACTTCCTGAAATaGACAAGGAGTATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFNHFLK*TRSIVH
Trigger: GTGGACAATACTCCTTGTGCATTTCAGGAAGTGATT...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCAATCACTTCCTGAAATaGACAAGGAGTATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFNHFLK*TRSIVH
Trigger: GTGGACAATACTCCTTGTGCATTTCAGGAAGTGATT...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGAAATCACTTCCTGAAATaGACAAGGAGTATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGNHFLK*TRSIVH
Trigger: GTGGACAATACTCCTTGTGCATTTCAGGAAGTGATT...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGTATTCCCTTTGAAATaGAGCAGCTTTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIAVFPLK*SSFGSS
Trigger: GGAAGAACCAAAGCTGCTGCATTTCAAAGGGAATAC...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTGTATTCCCTTTGAAATaGAGCAGCTTTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFVFPLK*SSFGSS
Trigger: GGAAGAACCAAAGCTGCTGCATTTCAAAGGGAATAC...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATTCTAGGATGGATGTCTaGACTTGGAGGATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYSRMDV*TWRICS
Trigger: TGAACAGATCCTCCAAGTGCAGACATCCATCCTAGA...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AAATGTAAACTACTCAGACTGTGTATGTGGAGTGGTAGAGACTGTAAATTAACGGAAGATCTGCATGGCTaGCCTTGCTTTGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: KCKLLRLCMWSGRDCKLTEDLHG*PCFAPE
Trigger: CTCAGGTGCAAAGCAAGGCCAGCCATGCAGATCTTC...CGTTAATTTACAGTCTCTACCACTCCACATACACAGTCTGAGTAGTTTACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CCA 90 bp TGGCCATTCAAGTCTTGGCCCAAAGCATCAATGTTCAAATACAGCTCTATGACACTGATGATCAAGTTATaGTCAGCCCTGGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: WPFKSWPKASMFKYSSMTLMIKL*SALVSM
Trigger: CATTGACACCAGGGCTGACCATAACTTGATCATCAG...TGTCATAGAGCTGTATTTGAACATTGATGCTTTGGGCCAAGACTTGAATGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATTTGAAGTTGAAGGTCTaGAAGCCACCTGTCAATGCA +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYLKLKV*KPPVNA
Trigger: TGCATTGACAGGTGGCTTCCAGACCTTCAACTTCAA...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168630.4
ENSMUST00000210298.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AAAATCAGCGCTTACTCAAAGCCTGGGACATCTGTAGTCTATATATTTTCCTGGTCAGATCTGGCTGCATaGCAGGATTCAGTAGTAGAG +
Preference number: 4 (lower is better)
Translates to: KISAYSKPGTSVVYIFSWSDLAA*QDSVVE
Trigger: CTCTACTACTGAATCCTGCCATGCAGCCAGATCTGA...CCAGGAAAATATATAGACTACAGATGTCCCAGGCTTTGAGTAAGCGCTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACTGTGACAAGCATATCTaGAGGCCCACAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYCDKHI*RPTGDF
Trigger: GAAGTCACCTGTGGGCCTCCAGATATGCTTGTCACA...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACGCCAGTCCTTGCCTTTaGCATTTGGGGTATCAAACG +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYASPCL*HLGYQT
Trigger: CGTTTGATACCCCAAATGCCAAAGGCAAGGACTGGC...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
3UTR CAA 72 bp ACAGTGGCAACTATTGAAACGGTGGCCATTCAAGTCTaGGCCCAAAGCATCAATGTTCAAATACAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: TVATIETVAIQV*AQSINVQIQLY
Trigger: ATAGAGCTGTATTTGAACATTGATGCTTTGGGCCAAGACTTGAATGGCCACCGTTTCAATAGTTGCCACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CAA 72 bp AAAGACACCACATGCTGTCAATACAGCCAAACAGCTTaGTCACCGCAGCTAGTGAAAGAGTTTGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: KDTTCCQYSQTA*SPQLVKEFGKE
Trigger: TTCTTTTCCAAACTCTTTCACTAGCTGCGGTGACAAAGCTGTTTGGCTGTATTGACAGCATGTGGTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CAA 72 bp GGCAACAAAGGAACATTAGAATTGCTGTCTCCACATTaGAGCAGAATGCTTGTGTTTTGGGAAAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GNKGTLELLSPH*SRMLVFWERVL
Trigger: CAAGACCCTTTCCCAAAACACAAGCATTCTGCTCAAATGTGGAGACAGCAATTCTAATGTTCCTTTGTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CAA 72 bp AGAGAAGGAGACAGCCGTTTCCCTGATAGTGGAATTTaGACACTTGGGTATTTCCCTGTTATCGAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: REGDSRFPDSGI*TLGYFPVIEKF
Trigger: AAACTTCTCGATAACAGGGAAATACCCAAGTGTCAAAATTCCACTATCAGGGAAACGGCTGTCTCCTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CAA 72 bp CTGTCCATGCTGACAATACTTCTAGGTCATGATTTATaGGAGTGTCTGTACCAATCAGACCTGGTTACGAAG +
Preference number: 4 (lower is better)
Translates to: LSMLTILLGHDL*ECLYQSDLVTK
Trigger: CTTCGTAACCAGGTCTGATTGGTACAGACACTCCAATAAATCATGACCTAGAAGTATTGTCAGCATGGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR TCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACTTTCAGATTCCTGGCTaGGACCTTCACAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYFQIPG*DLHRTC
Trigger: GCAAGTTCTGTGAAGGTCTCAGCCAGGAATCTGAAA...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACATGCAGAAGAGTCAATaGCATCCACTCCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYMQKSQ*HPLRSH
Trigger: GTGACTACGGAGTGGATGTCATTGACTCTTCTGCAT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCACCTTGGTTGATTaGCATATAAATCTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGFTLVD*HINLPR
Trigger: TCTTGGGAGATTTATATGTCAATCAACCAAGGTGAA...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGTCAGAAATCACTTCCTaGAATGCACAAGGAGTATTG +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIASEITS*NAQGVL
Trigger: CAATACTCCTTGTGCATTTCAGGAAGTGATTTCTGA...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCAGAAATCACTTCCTaGAATGCACAAGGAGTATTG +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFSEITS*NAQGVL
Trigger: CAATACTCCTTGTGCATTTCAGGAAGTGATTTCTGA...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACTGGAAGTCCTCCACTTaGTGCCTGGTGACATTGATA +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYWKSST*CLVTLI
Trigger: TATCAATGTCACCAGGCAGCAAGTGGAGGACTTCCA...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATGTATTCCCTTTGAAATaGAGCAGCTTTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYVFPLK*SSFGSS
Trigger: GGAAGAACCAAAGCTGCTGCATTTCAAAGGGAATAC...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ACCAATCAGACCTGGTTACGAAGAACAGAAATTCTGTTCTTCATGTGGTGTAGATCTAGGATGGATGTCTaGACTTGGAGGATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: TNQTWLRRTEILFFMWCRSRMDV*TWRICS
Trigger: TGAACAGATCCTCCAAGTGCAGACATCCATCCTAGA...TCTACACCACATGAAGAACAGAATTTCTGTTCTTCGTAACCAGGTCTGATTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR GCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACACATCTGCCAGTCCTTaGCTTTGGCATTTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYTSASP*LWHLGY
Trigger: ATACCCCAAATGCCAAAGGCAAGGACTGGCAGATGT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCAGAATTTCCTGTCAATaGAGAAGAGTCAATGACATC +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFRISCQ*RRVNDI
Trigger: GATGTCATTGACTCTTCTGCATTGACAGGAAATTCT...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000209401.2
ENSMUST00000210785.2
CDS-3UTR CCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTAACCTCCCTGCCTTGTaGATCTTGTTCAAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFNLPAL*ILFKVF
Trigger: AAAAACTTTGAACAAGATCCACAAGGCAGGGAGGTT...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCACCATAAATGAGCTCTaGACTTTGACTTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFTINEL*TLTLMS
Trigger: TGACATCAAAGTCAAAGTCCAGAGCTCATTTATGGT...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTAGTGATGACAGATTTTaGATGTACGGCGTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFSDDRF*MYGVLF
Trigger: AAACAAAACGCCGTACATCCAAAATCTGTCATCACT...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACGTTCACTCTCTAGGATaGATGTCTGCACTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYVHSLG*MSALGG
Trigger: TCCTCCAAGTGCAGACATCCATCCTAGAGAGTGAAC...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
3UTR CAA 72 bp AGATACCTTCACTTTTTAATCCTCGGCAGTCTGAATTaGAGGAGCATATCCAATGTCTACCCATGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: RYLHFLILGSLN*RSISNVYPCVD
Trigger: ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATTAAAAAGTGAAGGTATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TCCTTGTGGGCAGTTACTGAAAACTTCCTCCAGAAGAAGAGTATATCTGTTCATGTATTCCCTTTGAAATaGAGCAGCTTTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SLWAVTENFLQKKSISVHVFPLK*SSFGSS
Trigger: GGAAGAACCAAAGCTGCTGCATTTCAAAGGGAATAC...ATGAACAGATATACTCTTCTTCTGGAGGAAGTTTTCAGTAACTGCCCACAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR GCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTAGAATTTCCTGTCAATaGAGAAGAGTCAATGACATC +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFRISCQ*RRVNDI
Trigger: GATGTCATTGACTCTTCTGCATTGACAGGAAATTCT...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000209401.2
ENSMUST00000210785.2
CDS-3UTR CCA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAACCTCCCTGCCTTGTaGATCTTGTTCAAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYNLPAL*ILFKVF
Trigger: AAAAACTTTGAACAAGATCCACAAGGCAGGGAGGTT...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACCTGATGATCAAGTTATaGTCAGCCCTGGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYLMIKL*SALVSM
Trigger: CATTGACACCAGGGCTGACCATAACTTGATCATCAG...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACCAGTTTTCAGATTCCTaGCTGAGACCTTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYQFSDS*LRPSQN
Trigger: GTTCTGTGAAGGTCTCAGCCAGGAATCTGAAAACTG...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTACCATAAATGAGCTCTaGACTTTGACTTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFTINEL*TLTLMS
Trigger: TGACATCAAAGTCAAAGTCCAGAGCTCATTTATGGT...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGACCATAAATGAGCTCTaGACTTTGACTTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: NLRSISNVYPCVDSEGIATINEL*TLTLMS
Trigger: TGACATCAAAGTCAAAGTCCAGAGCTCATTTATGGT...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACGCGGAAGGGCTGCTTTaGGTAGCGAAATATGATAAA +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYAEGLL*VAKYDK
Trigger: TTTATCATATTTCGCTACCCAAAGCAGCCCTTCCGC...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACACAAAGCAATGTCGCTaGCATTCTCAATGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYTKQCR*HSQCFG
Trigger: CCCAAAGCATTGAGAATGCCAGCGACATTGCTTTGT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
CDS-3UTR TCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACTTTGCCTGCTGTAGTTaGAGTCAGCATCATCAATCT +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYFACCS*SQHHQS
Trigger: AGATTGATGATGCTGACTTCAACTACAGCAGGCAAA...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR GCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACGTGCAGGTTATTTTCTaGACTGACATTCCCTCACAA +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYVQVIF*TDIPSQ
Trigger: TTGTGAGGGAATGTCAGTGCAGAAAATAACCTGCAC...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS-3UTR CCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACAATTTTGAAGGCTTTTaGGCCAGTCTGTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYNFEGF*ASLCRK
Trigger: TTTCCTGCACAGACTGGCCCAAAAGCCTTCAAAATT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACACAAAGCAATGTCGCTaGCATTCTCAATGCCTAGAA +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYTKQCR*HSQCLE
Trigger: TTCTAGGCATTGAGAATGCCAGCGACATTGCTTTGT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AAATGTAAACTACTCAGACTGTGTATGTGGAGTGGTAGAGACTGTAAATTAACGTTTGCCTGCTGTAGTTaGAGTCAGCATCATCAATCT +
Preference number: 4 (lower is better)
Translates to: KCKLLRLCMWSGRDCKLTFACCS*SQHHQS
Trigger: AGATTGATGATGCTGACTTCAACTACAGCAGGCAAA...CGTTAATTTACAGTCTCTACCACTCCACATACACAGTCTGAGTAGTTTACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR GCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACAATCACTTCCTGAAATaGACAAGGAGTATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYNHFLK*TRSIVH
Trigger: GTGGACAATACTCCTTGTGCATTTCAGGAAGTGATT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
3UTR CAA 72 bp CATTTGAGCAGAATGCTTGTGTTTTGGGAAAGGGTCTaGTGGCATGACATTTGGCTTATTCCCTTTAAATAT +
Preference number: 4 (lower is better)
Translates to: HLSRMLVFWERV*WHDIWLIPFKY
Trigger: ATATTTAAAGGGAATAAGCCAAATGTCATGCCACAAGACCCTTTCCCAAAACACAAGCATTCTGCTCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR TCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACTTCACCTTGGTTGATTaGCATATAAATCTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYFTLVD*HINLPR
Trigger: TCTTGGGAGATTTATATGTCAATCAACCAAGGTGAA...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACACCATAAATGAGCTCTaGACTTTGACTTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYTINEL*TLTLMS
Trigger: TGACATCAAAGTCAAAGTCCAGAGCTCATTTATGGT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CCA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACAGTGATGACAGATTTTaGATGTACGGCGTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYSDDRF*MYGVLF
Trigger: AAACAAAACGCCGTACATCCAAAATCTGTCATCACT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR TCA 90 bp AAATGTAAACTACTCAGACTGTGTATGTGGAGTGGTAGAGACTGTAAATTAACGTTCACCTTGGTTGATTaGCATATAAATCTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: KCKLLRLCMWSGRDCKLTFTLVD*HINLPR
Trigger: TCTTGGGAGATTTATATGTCAATCAACCAAGGTGAA...CGTTAATTTACAGTCTCTACCACTCCACATACACAGTCTGAGTAGTTTACATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
3UTR CAA 72 bp ATTCTGACTAAGTCTGTCAGTTCGAAGATGATTCATTaGTTCAATAGAGTAAGCCTTTCATTCCTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: ILTKSVSSKMIH*FNRVSLSFLSK
Trigger: TTTGCTCAGGAATGAAAGGCTTACTCTATTGAACAAATGAATCATCTTCGAACTGACAGACTTAGTCAGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CAA 90 bp AGCCAAGGCCATGCTTCGCTTAGACCCTCTCCTGTGGCTTGCTCACTCCTTCAGGAGAGGCTCCTCCTCTaGGCCACGATGTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SQGHASLRPSPVACSLLQERLLL*ATMLAA
Trigger: GGCAGCCAACATCGTGGCCAAGAGGAGGAGCCTCTC...CTGAAGGAGTGAGCAAGCCACAGGAGAGGGTCTAAGCGAAGCATGGCCTTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS GCA 90 bp AGCCATTCCACCTCTGCTGCTGGAACTCCCTCTGGCGGGCGACAATaGAGCACGATCATGCCTTCAATAGGAACCTCCCTGCCTTGTGGA +
Preference number: 5 (lower is better)
Translates to: SHSTSAAGTPSGGRQ*STIMPSIGTSLPCG
Trigger: TCCACAAGGCAGGGAGGTTCCTATTGAAGGCATGATCGTGCTGCATTGTCGCCCGCCAGAGGGAGTTCCAGCAGCAGAGGTGGAATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 90 bp ATCTTCGGGCTCCTCGATGAAATGAGGCAGCGTTCCAGGGGCAGATaGGATAGAGTCGGGAAGAATTTCACTGCCATCGGCTCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: IFGLLDEMRQRSRGR*DRVGKNFTAIGSSG
Trigger: GCCCGAGGAGCCGATGGCAGTGAAATTCTTCCCGACTCTATCCCATCTGCCCCTGGAACGCTGCCTCATTTCATCGAGGAGCCCGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAAATGGCTGGCCTTGCTTaGCACCTGAGTGCAATCGGG +
Preference number: 5 (lower is better)
Translates to: PLEATALKQAITSAASGEMAGLA*HLSAIG
Trigger: CCCGATTGCACTCAGGTGCAAAGCAAGGCCAGCCAT...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGATGCCTTCCTACTCTaGGACGTTCCCAGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: SSPLEATALKQAITSAASDAFLL*DVPRWL
Trigger: GAGCCACCTGGGAACGTCCAAGAGTAGGAAGGCATC...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTCGTAGACCACCACAGTaGCTGAGAGGCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ALSSPLEATALKQAITSARRPPQ*LRGSSS
Trigger: AGAGGAGGAGCCTCTCAGCAACTGTGGTGGTCTACG...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCCGTAGACCACCACAGTaGCTGAGAGGCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SSPLEATALKQAITSAASRRPPQ*LRGSSS
Trigger: AGAGGAGGAGCCTCTCAGCAACTGTGGTGGTCTACG...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCACTTGCCCCCATTTCTaGGGGGTGGAGCTGTGCACT +
Preference number: 5 (lower is better)
Translates to: SSPLEATALKQAITSAASTCPHF*GVELCT
Trigger: AGTGCACAGCTCCACCCCCAAGAAATGGGGGCAAGT...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGGCCAAAGACACCAGTaGTCCTCAGCTCTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: ALSSPLEATALKQAITSAGQRHQ*SSALSL
Trigger: CAAGGACAGAGCTGAGGACAACTGGTGTCTTTGGCC...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGCCAAAGACACCAGTaGTCCTCAGCTCTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: SSPLEATALKQAITSAASGQRHQ*SSALSL
Trigger: CAAGGACAGAGCTGAGGACAACTGGTGTCTTTGGCC...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTTGCCGAATGCAGATTTaGCAGGACAGCTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: ALSSPLEATALKQAITSACRMQI*QDSWVV
Trigger: CACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCA...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS TCA 90 bp CTTCCCCTGCTGGGTCCTCTTCTTCAGGTGAATGTTCCAGTGCTCTaGACTGACGTCTGCACAGTGAGGGATGGTCAGCGCAAAGGGAGT +
Preference number: 5 (lower is better)
Translates to: LPLLGPLLQVNVPVL*TDVCTVRDGQRKGS
Trigger: ACTCCCTTTGCGCTGACCATCCCTCACTGTGCAGACGTCAGTTCAGAGCACTGGAACATTCACCTGAAGAAGAGGACCCAGCAGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS GCA 90 bp GTGGAGCTGTGCACTCACGGATACGAAGATGTTCACACTCTGGGCTaGAGACTGACCATTCACTCCACACTTCCCAGCTGCCATCCACAG +
Preference number: 5 (lower is better)
Translates to: VELCTHGYEDVHTLG*RLTIHSTLPSCHPQ
Trigger: CTGTGGATGGCAGCTGGGAAGTGTGGAGTGAATGGTCAGTCTGCAGCCCAGAGTGTGAACATCTTCGTATCCGTGAGTGCACAGCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS GCA 90 bp GTAGAGGGTGACACCAATGACCAGGACCGCAACAGCTACCACGGCTaGACCCAAGCCGGAGTACAAAGCAATGTCGCTGGCATTCTCAAT +
Preference number: 5 (lower is better)
Translates to: VEGDTNDQDRNSYHG*TQAGVQSNVAGILN
Trigger: ATTGAGAATGCCAGCGACATTGCTTTGTACTCCGGCTTGGGTGCAGCCGTGGTAGCTGTTGCGGTCCTGGTCATTGGTGTCACCCTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS GCA 90 bp AGGATGGATGTCTGCACTTGGAGGATCTGTTCATGGCCTTTGAGCTaGCGAATGCAGATTTTGCAGGACAGCTGGGTGGTGGTGGGCGTG +
Preference number: 5 (lower is better)
Translates to: RMDVCTWRICSWPLS*RMQILQDSWVVVGV
Trigger: CACGCCCACCACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCAAGTGCAGACATCCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS GCA 90 bp GTGGAGCTGTGCACTCACGGATACGAAGATGTTCACACTCTGGGCTaGAGACTGACCATTCACTCCACACTTCCCAGCTGCCATCCACGT +
Preference number: 5 (lower is better)
Translates to: VELCTHGYEDVHTLG*RLTIHSTLPSCHPR
Trigger: ACGTGGATGGCAGCTGGGAAGTGTGGAGTGAATGGTCAGTCTGCAGCCCAGAGTGTGAACATCTTCGTATCCGTGAGTGCACAGCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000211448.2
CDS CCA 90 bp GCAGCACGTGACAGGCAAAGGGATCCAAGAGGCAGTAACAGGATGTaGACTCATCCTCCACTGACATCACTTCCTCCCACTTCCCCTGCT +
Preference number: 5 (lower is better)
Translates to: AARDRQRDPRGSNRM*THPPLTSLPPTSPA
Trigger: AGCAGGGGAAGTGGGAGGAAGTGATGTCAGTGGAGGATGAGTCCACATCCTGTTACTGCCTCTTGGATCCCTTTGCCTGTCACGTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 90 bp TGCCATCCACGTAGACCACCACAGTTGCTGAGAGGCTCCTCCTCTTaGCCACGATGTTGGCTGCCATACAGGTGTAATTCCCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: CHPRRPPQLLRGSSS*PRCWLPYRCNSLSL
Trigger: CAGACTCAGGGAATTACACCTGTATGGCAGCCAACATCGTGGCCAAGAGGAGGAGCCTCTCAGCAACTGTGGTGGTCTACGTGGATGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAAGTACTGAATCCGCGGTaGTTTCCATGGGGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: PLEATALKQAITSAASGEVLNPR*FPWGKV
Trigger: GACTTTCCCCCATGGAAACAACCGCGGATTCAGTAC...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTCATGCAGTGAACGGTTaGATCCTCCAGAGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: ALSSPLEATALKQAITSAHAVNG*ILQRKG
Trigger: TCCCTTCCTCTGGAGGATCAAACCGTTCACTGCATG...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS TCA 90 bp TGTGCACTCACGGATACGAAGATGTTCACACTCTGGGCTGCAGACTaGCCATTCACTCCACACTTCCCAGCTGCCATCCACGTAGACCAC +
Preference number: 5 (lower is better)
Translates to: CALTDTKMFTLWAAD*PFTPHFPAAIHVDH
Trigger: GTGGTCTACGTGGATGGCAGCTGGGAAGTGTGGAGTGAATGGTCAGTCTGCAGCCCAGAGTGTGAACATCTTCGTATCCGTGAGTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000211448.2
CDS GCA 90 bp CCTTGCTTTGCACCTGAGTGCAATCGGGTTGCTCTTGATGATGTATaGATCTTCGGGCTCCTCGATGAAATGAGGCAGCGTTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: PCFAPECNRVALDDV*IFGLLDEMRQRSRG
Trigger: GCCCCTGGAACGCTGCCTCATTTCATCGAGGAGCCCGAAGATGCATACATCATCAAGAGCAACCCGATTGCACTCAGGTGCAAAGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 90 bp CTCCATTCACGTAGACCACCACAGTTGCTGAGAGGCTCCTCCTCTTaGCCACGATGTTGGCTGCCATACAGGTGTAATTCCCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: LHSRRPPQLLRGSSS*PRCWLPYRCNSLSL
Trigger: CAGACTCAGGGAATTACACCTGTATGGCAGCCAACATCGTGGCCAAGAGGAGGAGCCTCTCAGCAACTGTGGTGGTCTACGTGAATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS CCA 90 bp TTCCTGGCTGAGACCTTCACAGAACTTGCCCCCATTTCTTGGGGGTaGAGCTGTGCACTCACGGATACGAAGATGTTCACACTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: FLAETFTELAPISWG*SCALTDTKMFTLWA
Trigger: AGCCCAGAGTGTGAACATCTTCGTATCCGTGAGTGCACAGCTCCACCCCCAAGAAATGGGGGCAAGTTCTGTGAAGGTCTCAGCCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 90 bp ACAGTGAGGGATGGTCAGCGCAAAGGGAGTTGTGACAAGCATATCTaGAGGCCCACAGGTGACTTCAGGACTCAGGAGAACCTCAGATCC +
Preference number: 5 (lower is better)
Translates to: TVRDGQRKGSCDKHI*RPTGDFRTQENLRS
Trigger: GGATCTGAGGTTCTCCTGAGTCCTGAAGTCACCTGTGGGCCTCCAGATATGCTTGTCACAACTCCCTTTGCGCTGACCATCCCTCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCATGGAAGTCCTCCACTaGCTGCCTGGTGACATTGAT +
Preference number: 5 (lower is better)
Translates to: SSPLEATALKQAITSAASMEVLH*LPGDID
Trigger: ATCAATGTCACCAGGCAGCAAGTGGAGGACTTCCAT...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTATGGAAGTCCTCCACTaGCTGCCTGGTGACATTGAT +
Preference number: 5 (lower is better)
Translates to: ALSSPLEATALKQAITSAMEVLH*LPGDID
Trigger: ATCAATGTCACCAGGCAGCAAGTGGAGGACTTCCAT...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTAACATCTGCCAGTCCTaGCCTTTGGCATTTGGGGTA +
Preference number: 5 (lower is better)
Translates to: ALSSPLEATALKQAITSANICQS*PLAFGV
Trigger: TACCCCAAATGCCAAAGGCAAGGACTGGCAGATGTT...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAAAACATCTGCCAGTCCTaGCCTTTGGCATTTGGGGTA +
Preference number: 5 (lower is better)
Translates to: PLEATALKQAITSAASGENICQS*PLAFGV
Trigger: TACCCCAAATGCCAAAGGCAAGGACTGGCAGATGTT...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS TCA 90 bp TGTGCACTCACGGATACGAAGATGTTCACACTCTGGGCTGCAGACTaGCCATTCACTCCACACTTCCCAGCTGCCATCCACAGGACAAAG +
Preference number: 5 (lower is better)
Translates to: CALTDTKMFTLWAAD*PFTPHFPAAIHRTK
Trigger: CTTTGTCCTGTGGATGGCAGCTGGGAAGTGTGGAGTGAATGGTCAGTCTGCAGCCCAGAGTGTGAACATCTTCGTATCCGTGAGTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS TCA 90 bp ATTGTACTGAATCCGCGGTTGTTTCCATGGGGGAAAGTCCCCGAGTaGTTCTTGCCATGGTACTCCGCTCTCTCAGACACTCCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: IVLNPRLFPWGKVPE*FLPWYSALSDTPRE
Trigger: TTCCCTGGGAGTGTCTGAGAGAGCGGAGTACCATGGCAAGAATCACTCGGGGACTTTCCCCCATGGAAACAACCGCGGATTCAGTACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGCAATCGGGTTGCTCTaGATGATGTATGCATCTTCG +
Preference number: 5 (lower is better)
Translates to: SSPLEATALKQAITSAASAIGLL*MMYASS
Trigger: CGAAGATGCATACATCATCAAGAGCAACCCGATTGC...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGAGAGGCTCCTCCTCTaGGCCACGATGTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFERLLL*ATMLAA
Trigger: GGCAGCCAACATCGTGGCCAAGAGGAGGAGCCTCTC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGAGAGAGGCTCCTCCTCTaGGCCACGATGTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGERLLL*ATMLAA
Trigger: GGCAGCCAACATCGTGGCCAAGAGGAGGAGCCTCTC...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS TCA 90 bp GGGTTGCTCTTGATGATGTATGCATCTTCGGGCTCCTCGATGAAATaGGGCAGCGTTCCAGGGGCAGATGGGATAGAGTCGGGAAGAATT +
Preference number: 5 (lower is better)
Translates to: GLLLMMYASSGSSMK*GSVPGADGIESGRI
Trigger: AATTCTTCCCGACTCTATCCCATCTGCCCCTGGAACGCTGCCTCATTTCATCGAGGAGCCCGAAGATGCATACATCATCAAGAGCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 90 bp TTCAGATTCCTGGCTGAGACCTTCACAGAACTTGCCCCCATTTCTTaGGGGTGGAGCTGTGCACTCACGGATACGAAGATGTTCACACTC +
Preference number: 5 (lower is better)
Translates to: FRFLAETFTELAPIS*GWSCALTDTKMFTL
Trigger: GAGTGTGAACATCTTCGTATCCGTGAGTGCACAGCTCCACCCCCAAGAAATGGGGGCAAGTTCTGTGAAGGTCTCAGCCAGGAATCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 90 bp CGTTCACTCTCTAGGATGGATGTCTGCACTTGGAGGATCTGTTCATaGCCTTTGAGCTGCCGAATGCAGATTTTGCAGGACAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: RSLSRMDVCTWRICS*PLSCRMQILQDSWV
Trigger: CACCCAGCTGTCCTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCAAGTGCAGACATCCATCCTAGAGAGTGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCCGTAGACCACCACAGTaGCTGAGAGGCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFRRPPQ*LRGSSS
Trigger: AGAGGAGGAGCCTCTCAGCAACTGTGGTGGTCTACG...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTAAAGGTACTGTCCTCTaGTGCGAAGAAAGTGATGGT +
Preference number: 5 (lower is better)
Translates to: ALSSPLEATALKQAITSAKGTVL*CEESDG
Trigger: ACCATCACTTTCTTCGCACAAGAGGACAGTACCTTT...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCAAAGGTACTGTCCTCTaGTGCGAAGAAAGTGATGGT +
Preference number: 5 (lower is better)
Translates to: SSPLEATALKQAITSAASKGTVL*CEESDG
Trigger: ACCATCACTTTCTTCGCACAAGAGGACAGTACCTTT...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS TCA 90 bp TTGCTGCCTGGTGACATTGATAAACACTTCCCGGACCTTCAAGCCTaGGCTCTCATCCAGGCTCTCCTCGGACACATGTTCATTCTGATG +
Preference number: 5 (lower is better)
Translates to: LLPGDIDKHFPDLQA*ALIQALLGHMFILM
Trigger: CATCAGAATGAACATGTGTCCGAGGAGAGCCTGGATGAGAGCTCAGGCTTGAAGGTCCGGGAAGTGTTTATCAATGTCACCAGGCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 90 bp AGTAGACTCACCCCTGTATTTGGCATTACTAAGCGTCCCCCTAAATaGCCAAAGACACCAGTTGTCCTCAGCTCTGTCCTTGTCGGCAGT +
Preference number: 5 (lower is better)
Translates to: SRLTPVFGITKRPPK*PKTPVVLSSVLVGS
Trigger: ACTGCCGACAAGGACAGAGCTGAGGACAACTGGTGTCTTTGGCCATTTAGGGGGACGCTTAGTAATGCCAAATACAGGGGTGAGTCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTATGGCTGGCCTTGCTTaGCACCTGAGTGCAATCGGG +
Preference number: 5 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFMAGLA*HLSAIG
Trigger: CCCGATTGCACTCAGGTGCAAAGCAAGGCCAGCCAT...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATATGGCTGGCCTTGCTTaGCACCTGAGTGCAATCGGG +
Preference number: 5 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDMAGLA*HLSAIG
Trigger: CCCGATTGCACTCAGGTGCAAAGCAAGGCCAGCCAT...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTGATGCCTTCCTACTCTaGGACGTTCCCAGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFDAFLL*DVPRWL
Trigger: GAGCCACCTGGGAACGTCCAAGAGTAGGAAGGCATC...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGATGCCTTCCTACTCTaGGACGTTCCCAGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFDAFLL*DVPRWL
Trigger: GAGCCACCTGGGAACGTCCAAGAGTAGGAAGGCATC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGACGTAGACCACCACAGTaGCTGAGAGGCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGRRPPQ*LRGSSS
Trigger: AGAGGAGGAGCCTCTCAGCAACTGTGGTGGTCTACG...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATACTTGCCCCCATTTCTaGGGGGTGGAGCTGTGCACT +
Preference number: 5 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDTCPHF*GVELCT
Trigger: AGTGCACAGCTCCACCCCCAAGAAATGGGGGCAAGT...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTTGGATGTACGGCGTTTaGTTTCTGGGATGTATTGTA +
Preference number: 5 (lower is better)
Translates to: ALSSPLEATALKQAITSAWMYGV*FLGCIV
Trigger: TACAATACATCCCAGAAACAAAACGCCGTACATCCA...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp GCCCTGTCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTCTGAATGTATTCCCTTaGAAATGCAGCAGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: ALSSPLEATALKQAITSALNVFP*KCSSFG
Trigger: ACCAAAGCTGCTGCATTTCAAAGGGAATACATTCAG...AGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGACAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AACAGCACTCTGACATTAGAGTGGCTTGGCTGGGAACAGAGATTGTTTGTCCTGTGCCGAATGCAGATTTaGCAGGACAGCTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: NSTLTLEWLGWEQRLFVLCRMQI*QDSWVV
Trigger: CACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCA...CAGGACAAACAATCTCTGTTCCCAGCCAAGCCACTCTAATGTCAGAGTGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS CCA 90 bp GGCGCAGATCCTCTGTCTGATGGAATAGGGAATTTTGAAGGCTTTTaGGCCAGTCTGTGCAGGAAAGGTACTGTCCTCTTGTGCGAAGAA +
Preference number: 5 (lower is better)
Translates to: GADPLSDGIGNFEGF*ASLCRKGTVLLCEE
Trigger: TTCTTCGCACAAGAGGACAGTACCTTTCCTGCACAGACTGGCCCAAAAGCCTTCAAAATTCCCTATTCCATCAGACAGAGGATCTGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATACATGGTAGGTTCGAAGACATGAAGTTGCAACGTTACTGTCTTAGGCCCACTGATGCCTTCCTACTCTaGGACGTTCCCAGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: IHGRFEDMKLQRYCLRPTDAFLL*DVPRWL
Trigger: GAGCCACCTGGGAACGTCCAAGAGTAGGAAGGCATC...AGTGGGCCTAAGACAGTAACGTTGCAACTTCATGTCTTCGAACCTACCATGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CAA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTCGTAGACCACCACAGTaGCTGAGAGGCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGRRPPQ*LRGSSS
Trigger: AGAGGAGGAGCCTCTCAGCAACTGTGGTGGTCTACG...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATACATGGTAGGTTCGAAGACATGAAGTTGCAACGTTACTGTCTTAGGCCCACTACTTGCCCCCATTTCTaGGGGGTGGAGCTGTGCACT +
Preference number: 5 (lower is better)
Translates to: IHGRFEDMKLQRYCLRPTTCPHF*GVELCT
Trigger: AGTGCACAGCTCCACCCCCAAGAAATGGGGGCAAGT...AGTGGGCCTAAGACAGTAACGTTGCAACTTCATGTCTTCGAACCTACCATGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CAA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTACTTGCCCCCATTTCTaGGGGGTGGAGCTGTGCACT +
Preference number: 5 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFTCPHF*GVELCT
Trigger: AGTGCACAGCTCCACCCCCAAGAAATGGGGGCAAGT...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGACTTGCCCCCATTTCTaGGGGGTGGAGCTGTGCACT +
Preference number: 5 (lower is better)
Translates to: NLRSISNVYPCVDSEGIATCPHF*GVELCT
Trigger: AGTGCACAGCTCCACCCCCAAGAAATGGGGGCAAGT...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AGCCAAGGCCATGCTTCGCTTAGACCCTCTCCTGTGGCTTGCTCACTCCTTCAGTCTCCTACTCCATCTTaGGGGTTTTATTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: SQGHASLRPSPVACSLLQSPTPS*GFYFMK
Trigger: CTTCATGAAATAAAACCCCAAAGATGGAGTAGGAGA...CTGAAGGAGTGAGCAAGCCACAGGAGAGGGTCTAAGCGAAGCATGGCCTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CAA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCTGTCATGAGCTCCTaGTCGAGCGGATCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDSVMSS*SSGSCR
Trigger: TCTGCAGGATCCGCTCGACAAGGAGCTCATGACAGA...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATCTGTCATGAGCTCCTaGTCGAGCGGATCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGSVMSS*SSGSCR
Trigger: TCTGCAGGATCCGCTCGACAAGGAGCTCATGACAGA...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCTCCTCAGCTCTGTCCTaGTCGGCAGTGATGACAGAT +
Preference number: 5 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFSSALS*SAVMTD
Trigger: ATCTGTCATCACTGCCGACAAGGACAGAGCTGAGGA...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGAGGCCAAAGACACCAGTaGTCCTCAGCTCTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGGQRHQ*SSALSL
Trigger: CAAGGACAGAGCTGAGGACAACTGGTGTCTTTGGCC...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCGACTCACCCCTGTATTaGGCATTACTAAGCGTCCCC +
Preference number: 5 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFDSPLY*ALLSVP
Trigger: GGGGACGCTTAGTAATGCCAAATACAGGGGTGAGTC...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTGCCGAATGCAGATTTaGCAGGACAGCTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFCRMQI*QDSWVV
Trigger: CACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCA...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCCCTTGCCTTTGGCATTaGGGGTATCAAACGTGGCGC +
Preference number: 5 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFPCLWH*GYQTWR
Trigger: GCGCCACGTTTGATACCCCAAATGCCAAAGGCAAGG...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTCCTTGCCTTTGGCATTaGGGGTATCAAACGTGGCGC +
Preference number: 5 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFPCLWH*GYQTWR
Trigger: GCGCCACGTTTGATACCCCAAATGCCAAAGGCAAGG...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGCATTCTCAATGCTTaGGGGTTTTATTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: SSPLEATALKQAITSAASGILNA*GFYFMK
Trigger: CTTCATGAAATAAAACCCCAAAGCATTGAGAATGCC...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
CDS-3UTR CAA 90 bp CCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCGGAGAAGGCATTCTCAATGCTTaGGGGTTTTATTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: PLEATALKQAITSAASGEGILNA*GFYFMK
Trigger: CTTCATGAAATAAAACCCCAAAGCATTGAGAATGCC...TTCTCCGGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
CDS-3UTR CAA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGCTACCACAGCGAACATaGCAGGCTGACCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: NLRSISNVYPCVDSEGIALPQRT*QADHSV
Trigger: GACAGAGTGGTCAGCCTGCAATGTTCGCTGTGGTAG...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS-3UTR CAA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCTGTCATGAGCTCCTaGTCGAGCGGATCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFSVMSS*SSGSCR
Trigger: TCTGCAGGATCCGCTCGACAAGGAGCTCATGACAGA...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGTCTGTCATGAGCTCCTaGTCGAGCGGATCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: NLRSISNVYPCVDSEGIASVMSS*SSGSCR
Trigger: TCTGCAGGATCCGCTCGACAAGGAGCTCATGACAGA...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCTTCCCCACTTGAAGCCACTGCTCTGAAGCAGGCCATCACTAGTGCTGCCTCCAATGAGCTCTGGACTTaGACTTTGATGTCAGATAAA +
Preference number: 5 (lower is better)
Translates to: SSPLEATALKQAITSAASNELWT*TLMSDK
Trigger: TTTATCTGACATCAAAGTCAAAGTCCAGAGCTCATT...GGAGGCAGCACTAGTGATGGCCTGCTTCAGAGCAGTGGCTTCAAGTGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AACAGAACACAAAACCTGAATCTAATGGGGGCAACTGCAGACACATGGGACCAAGTACTGAATCCGCGGTaGTTTCCATGGGGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: NRTQNLNLMGATADTWDQVLNPR*FPWGKV
Trigger: GACTTTCCCCCATGGAAACAACCGCGGATTCAGTAC...TTGGTCCCATGTGTCTGCAGTTGCCCCCATTAGATTCAGGTTTTGTGTTCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CAA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTGTACTGAATCCGCGGTaGTTTCCATGGGGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFVLNPR*FPWGKV
Trigger: GACTTTCCCCCATGGAAACAACCGCGGATTCAGTAC...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGTACTGAATCCGCGGTaGTTTCCATGGGGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFVLNPR*FPWGKV
Trigger: GACTTTCCCCCATGGAAACAACCGCGGATTCAGTAC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATCCTCAGCTCTGTCCTaGTCGGCAGTGATGACAGAT +
Preference number: 5 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGSSALS*SAVMTD
Trigger: ATCTGTCATCACTGCCGACAAGGACAGAGCTGAGGA...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCGACTCACCCCTGTATTaGGCATTACTAAGCGTCCCC +
Preference number: 5 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFDSPLY*ALLSVP
Trigger: GGGGACGCTTAGTAATGCCAAATACAGGGGTGAGTC...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATCATGCAGTGAACGGTTaGATCCTCCAGAGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDHAVNG*ILQRKG
Trigger: TCCCTTCCTCTGGAGGATCAAACCGTTCACTGCATG...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTGCCGAATGCAGATTTaGCAGGACAGCTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFCRMQI*QDSWVV
Trigger: CACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCA...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGTGCCGAATGCAGATTTaGCAGGACAGCTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: NLRSISNVYPCVDSEGIACRMQI*QDSWVV
Trigger: CACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCA...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGCCTTGCCTTTGGCATTaGGGGTATCAAACGTGGCGC +
Preference number: 5 (lower is better)
Translates to: NLRSISNVYPCVDSEGIAPCLWH*GYQTWR
Trigger: GCGCCACGTTTGATACCCCAAATGCCAAAGGCAAGG...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 90 bp CCAGTTGTCCTCAGCTCTGTCCTTGTCGGCAGTGATGACAGATTTTaGATGTACGGCGTTTTGTTTCTGGGATGTATTGTACTGAATCCG +
Preference number: 5 (lower is better)
Translates to: PVVLSSVLVGSDDRF*MYGVLFLGCIVLNP
Trigger: CGGATTCAGTACAATACATCCCAGAAACAAAACGCCGTACATCCAAAATCTGTCATCACTGCCGACAAGGACAGAGCTGAGGACAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCCTGAGTGCAATCGGGTaGCTCTTGATGATGTATGCA +
Preference number: 5 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFLSAIG*LLMMYA
Trigger: TGCATACATCATCAAGAGCAACCCGATTGCACTCAG...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGAATGGAAGTCCTCCACTaGCTGCCTGGTGACATTGAT +
Preference number: 5 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGMEVLH*LPGDID
Trigger: ATCAATGTCACCAGGCAGCAAGTGGAGGACTTCCAT...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATACATGGTAGGTTCGAAGACATGAAGTTGCAACGTTACTGTCTTAGGCCCACTAGACCTTCACAGAACTaGCCCCCATTTCTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: IHGRFEDMKLQRYCLRPTRPSQN*PPFLGG
Trigger: ACCCCCAAGAAATGGGGGCAAGTTCTGTGAAGGTCT...AGTGGGCCTAAGACAGTAACGTTGCAACTTCATGTCTTCGAACCTACCATGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CAA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTAGACCTTCACAGAACTaGCCCCCATTTCTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFRPSQN*PPFLGG
Trigger: ACCCCCAAGAAATGGGGGCAAGTTCTGTGAAGGTCT...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTAGACCTTCACAGAACTaGCCCCCATTTCTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGRPSQN*PPFLGG
Trigger: ACCCCCAAGAAATGGGGGCAAGTTCTGTGAAGGTCT...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCCGAACTGTTTTGAAGTaGAAGGTCTGGAAGCCACCT +
Preference number: 5 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFRTVLK*KVWKPP
Trigger: AGGTGGCTTCCAGACCTTCAACTTCAAAACAGTTCG...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168630.4
ENSMUST00000210298.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATTCTGTCATGAGCTCCTaGTCGAGCGGATCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYSVMSS*SSGSCR
Trigger: TCTGCAGGATCCGCTCGACAAGGAGCTCATGACAGA...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTGTACTGAATCCGCGGTaGTTTCCATGGGGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFVLNPR*FPWGKV
Trigger: GACTTTCCCCCATGGAAACAACCGCGGATTCAGTAC...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCCTCAGCTCTGTCCTaGTCGGCAGTGATGACAGAT +
Preference number: 5 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFSSALS*SAVMTD
Trigger: ATCTGTCATCACTGCCGACAAGGACAGAGCTGAGGA...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTTCCTCAGCTCTGTCCTaGTCGGCAGTGATGACAGAT +
Preference number: 5 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGSSALS*SAVMTD
Trigger: ATCTGTCATCACTGCCGACAAGGACAGAGCTGAGGA...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGTCCTCAGCTCTGTCCTaGTCGGCAGTGATGACAGAT +
Preference number: 5 (lower is better)
Translates to: NLRSISNVYPCVDSEGIASSALS*SAVMTD
Trigger: ATCTGTCATCACTGCCGACAAGGACAGAGCTGAGGA...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATGGCCAAAGACACCAGTaGTCCTCAGCTCTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYGQRHQ*SSALSL
Trigger: CAAGGACAGAGCTGAGGACAACTGGTGTCTTTGGCC...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTGACTCACCCCTGTATTaGGCATTACTAAGCGTCCCC +
Preference number: 5 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFDSPLY*ALLSVP
Trigger: GGGGACGCTTAGTAATGCCAAATACAGGGGTGAGTC...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTCATGCAGTGAACGGTTaGATCCTCCAGAGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGHAVNG*ILQRKG
Trigger: TCCCTTCCTCTGGAGGATCAAACCGTTCACTGCATG...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTGCCAGTCCTTGCCTTaGGCATTTGGGGTATCAAAC +
Preference number: 5 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDCQSLP*AFGVSN
Trigger: GTTTGATACCCCAAATGCCAAAGGCAAGGACTGGCA...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATGCCAGTCCTTGCCTTaGGCATTTGGGGTATCAAAC +
Preference number: 5 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGCQSLP*AFGVSN
Trigger: GTTTGATACCCCAAATGCCAAAGGCAAGGACTGGCA...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTGCCAGTCCTTGCCTTaGGCATTTGGGGTATCAAAC +
Preference number: 5 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFCQSLP*AFGVSN
Trigger: GTTTGATACCCCAAATGCCAAAGGCAAGGACTGGCA...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCTGCCAGTCCTTGCCTTaGGCATTTGGGGTATCAAAC +
Preference number: 5 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFCQSLP*AFGVSN
Trigger: GTTTGATACCCCAAATGCCAAAGGCAAGGACTGGCA...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATAACATCTGCCAGTCCTaGCCTTTGGCATTTGGGGTA +
Preference number: 5 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDNICQS*PLAFGV
Trigger: TACCCCAAATGCCAAAGGCAAGGACTGGCAGATGTT...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATGCAATCGGGTTGCTCTaGATGATGTATGCATCTTCG +
Preference number: 5 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDAIGLL*MMYASS
Trigger: CGAAGATGCATACATCATCAAGAGCAACCCGATTGC...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTGCAATCGGGTTGCTCTaGATGATGTATGCATCTTCG +
Preference number: 5 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFAIGLL*MMYASS
Trigger: CGAAGATGCATACATCATCAAGAGCAACCCGATTGC...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATCTGAGTGCAATCGGGTaGCTCTTGATGATGTATGCA +
Preference number: 5 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDLSAIG*LLMMYA
Trigger: TGCATACATCATCAAGAGCAACCCGATTGCACTCAG...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACATGGCTGGCCTTGCTTaGCACCTGAGTGCAATCGGG +
Preference number: 5 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYMAGLA*HLSAIG
Trigger: CCCGATTGCACTCAGGTGCAAAGCAAGGCCAGCCAT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTATGGAAGTCCTCCACTaGCTGCCTGGTGACATTGAT +
Preference number: 5 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFMEVLH*LPGDID
Trigger: ATCAATGTCACCAGGCAGCAAGTGGAGGACTTCCAT...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACGATGCCTTCCTACTCTaGGACGTTCCCAGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYDAFLL*DVPRWL
Trigger: GAGCCACCTGGGAACGTCCAAGAGTAGGAAGGCATC...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCATCTGTTCATGGCCTTaGAGCTGCCGAATGCAGATT +
Preference number: 5 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFICSWP*SCRMQI
Trigger: AATCTGCATTCGGCAGCTCAAAGGCCATGAACAGAT...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATATCTGTTCATGGCCTTaGAGCTGCCGAATGCAGATT +
Preference number: 5 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDICSWP*SCRMQI
Trigger: AATCTGCATTCGGCAGCTCAAAGGCCATGAACAGAT...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCCTTGTGGGCAGTTACTGAAAACTTCCTCCAGAAGAAGAGTATATCTGTTCATCCTTGCCTTTGGCATTaGGGGTATCAAACGTGGCGC +
Preference number: 5 (lower is better)
Translates to: SLWAVTENFLQKKSISVHPCLWH*GYQTWR
Trigger: GCGCCACGTTTGATACCCCAAATGCCAAAGGCAAGG...ATGAACAGATATACTCTTCTTCTGGAGGAAGTTTTCAGTAACTGCCCACAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CAA 90 bp ATACATGGTAGGTTCGAAGACATGAAGTTGCAACGTTACTGTCTTAGGCCCACTAACATCTGCCAGTCCTaGCCTTTGGCATTTGGGGTA +
Preference number: 5 (lower is better)
Translates to: IHGRFEDMKLQRYCLRPTNICQS*PLAFGV
Trigger: TACCCCAAATGCCAAAGGCAAGGACTGGCAGATGTT...AGTGGGCCTAAGACAGTAACGTTGCAACTTCATGTCTTCGAACCTACCATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CAA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTGTGGCTCTGTGATGTaGGATAGTTTCGTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFCGSVM*DSFVCV
Trigger: GACACACACGAAACTATCCAACATCACAGAGCCACA...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 90 bp TACTCCGCTCTCTCAGACACTCCCAGGGAAACCATAAATGAGCTCTaGACTTTGACTTTGATGTCAGATAAAGGATTGAAGAGTGAGGAC +
Preference number: 5 (lower is better)
Translates to: YSALSDTPRETINEL*TLTLMSDKGLKSED
Trigger: GTCCTCACTCTTCAATCCTTTATCTGACATCAAAGTCAAAGTCCAGAGCTCATTTATGGTTTCCCTGGGAGTGTCTGAGAGAGCGGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTCTGAGTGCAATCGGGTaGCTCTTGATGATGTATGCA +
Preference number: 5 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGLSAIG*LLMMYA
Trigger: TGCATACATCATCAAGAGCAACCCGATTGCACTCAG...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACCTACCACAGCGAACATaGCAGGCTGACCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYLPQRT*QADHSV
Trigger: GACAGAGTGGTCAGCCTGCAATGTTCGCTGTGGTAG...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS-3UTR CAA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGCGAACTGTTTTGAAGTaGAAGGTCTGGAAGCCACCT +
Preference number: 5 (lower is better)
Translates to: NLRSISNVYPCVDSEGIARTVLK*KVWKPP
Trigger: AGGTGGCTTCCAGACCTTCAACTTCAAAACAGTTCG...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168630.4
ENSMUST00000210298.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCATGTCAGATAAAGGATaGAAGAGTGAGGACTCTGTC +
Preference number: 5 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFMSDKG*KSEDSV
Trigger: GACAGAGTCCTCACTCTTCAATCCTTTATCTGACAT...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCTGGATGTACGGCGTTTaGTTTCTGGGATGTATTGTA +
Preference number: 5 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFWMYGV*FLGCIV
Trigger: TACAATACATCCCAGAAACAAAACGCCGTACATCCA...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATAAAGGTACTGTCCTCTaGTGCGAAGAAAGTGATGGT +
Preference number: 5 (lower is better)
Translates to: ILGSLNLRSISNVYPCVDKGTVL*CEESDG
Trigger: ACCATCACTTTCTTCGCACAAGAGGACAGTACCTTT...ATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTAAAGGTACTGTCCTCTaGTGCGAAGAAAGTGATGGT +
Preference number: 5 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFKGTVL*CEESDG
Trigger: ACCATCACTTTCTTCGCACAAGAGGACAGTACCTTT...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACCCTTGCCTTTGGCATTaGGGGTATCAAACGTGGCGC +
Preference number: 5 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYPCLWH*GYQTWR
Trigger: GCGCCACGTTTGATACCCCAAATGCCAAAGGCAAGG...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAACATCTGCCAGTCCTaGCCTTTGGCATTTGGGGTA +
Preference number: 5 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYNICQS*PLAFGV
Trigger: TACCCCAAATGCCAAAGGCAAGGACTGGCAGATGTT...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTGTGGCTCTGTGATGTaGGATAGTTTCGTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: ISNVYPCVDSEGIAGFSFCGSVM*DSFVCV
Trigger: GACACACACGAAACTATCCAACATCACAGAGCCACA...AAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGTGTGGCTCTGTGATGTaGGATAGTTTCGTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: NLRSISNVYPCVDSEGIACGSVM*DSFVCV
Trigger: GACACACACGAAACTATCCAACATCACAGAGCCACA...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATGCAATCGGGTTGCTCTaGATGATGTATGCATCTTCG +
Preference number: 5 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYAIGLL*MMYASS
Trigger: CGAAGATGCATACATCATCAAGAGCAACCCGATTGC...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATCTGAGTGCAATCGGGTaGCTCTTGATGATGTATGCA +
Preference number: 5 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYLSAIG*LLMMYA
Trigger: TGCATACATCATCAAGAGCAACCCGATTGCACTCAG...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACAGACCTTCACAGAACTaGCCCCCATTTCTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYRPSQN*PPFLGG
Trigger: ACCCCCAAGAAATGGGGGCAAGTTCTGTGAAGGTCT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATCGAACTGTTTTGAAGTaGAAGGTCTGGAAGCCACCT +
Preference number: 5 (lower is better)
Translates to: SEFEEHIQCLPMCGFRGYRTVLK*KVWKPP
Trigger: AGGTGGCTTCCAGACCTTCAACTTCAAAACAGTTCG...ATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000168630.4
ENSMUST00000210298.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTATGTCAGATAAAGGATaGAAGAGTGAGGACTCTGTC +
Preference number: 5 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFMSDKG*KSEDSV
Trigger: GACAGAGTCCTCACTCTTCAATCCTTTATCTGACAT...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AACAGCACTCTGACATTAGAGTGGCTTGGCTGGGAACAGAGATTGTTTGTCCTGCTCTGGACTTTGACTTaGATGTCAGATAAAGGATTG +
Preference number: 5 (lower is better)
Translates to: NSTLTLEWLGWEQRLFVLLWTLT*MSDKGL
Trigger: CAATCCTTTATCTGACATCAAAGTCAAAGTCCAGAG...CAGGACAAACAATCTCTGTTCCCAGCCAAGCCACTCTAATGTCAGAGTGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CAA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCCTCTGGACTTTGACTTaGATGTCAGATAAAGGATTG +
Preference number: 5 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFLWTLT*MSDKGL
Trigger: CAATCCTTTATCTGACATCAAAGTCAAAGTCCAGAG...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCTGGATGTACGGCGTTTaGTTTCTGGGATGTATTGTA +
Preference number: 5 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFWMYGV*FLGCIV
Trigger: TACAATACATCCCAGAAACAAAACGCCGTACATCCA...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGACTGAATGTATTCCCTTaGAAATGCAGCAGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGLNVFP*KCSSFG
Trigger: ACCAAAGCTGCTGCATTTCAAAGGGAATACATTCAG...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACCATGCAGTGAACGGTTaGATCCTCCAGAGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYHAVNG*ILQRKG
Trigger: TCCCTTCCTCTGGAGGATCAAACCGTTCACTGCATG...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TGGCCATTCAAGTCTTGGCCCAAAGCATCAATGTTCAAATACAGCTCTATGACAATCTGTTCATGGCCTTaGAGCTGCCGAATGCAGATT +
Preference number: 5 (lower is better)
Translates to: WPFKSWPKASMFKYSSMTICSWP*SCRMQI
Trigger: AATCTGCATTCGGCAGCTCAAAGGCCATGAACAGAT...TGTCATAGAGCTGTATTTGAACATTGATGCTTTGGGCCAAGACTTGAATGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS-3UTR CAA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGAAAGGTACTGTCCTCTaGTGCGAAGAAAGTGATGGT +
Preference number: 5 (lower is better)
Translates to: NLRSISNVYPCVDSEGIAKGTVL*CEESDG
Trigger: ACCATCACTTTCTTCGCACAAGAGGACAGTACCTTT...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACATGGAAGTCCTCCACTaGCTGCCTGGTGACATTGAT +
Preference number: 5 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYMEVLH*LPGDID
Trigger: ATCAATGTCACCAGGCAGCAAGTGGAGGACTTCCAT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTCTCTGGACTTTGACTTaGATGTCAGATAAAGGATTG +
Preference number: 5 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFLWTLT*MSDKGL
Trigger: CAATCCTTTATCTGACATCAAAGTCAAAGTCCAGAG...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATCCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGACTCTGGACTTTGACTTaGATGTCAGATAAAGGATTG +
Preference number: 5 (lower is better)
Translates to: NPRQSEFEEHIQCLPMCGLWTLT*MSDKGL
Trigger: CAATCCTTTATCTGACATCAAAGTCAAAGTCCAGAG...TCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CCTCGGCAGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAATGAGCTCTGGACTTaGACTTTGATGTCAGATAAA +
Preference number: 5 (lower is better)
Translates to: PRQSEFEEHIQCLPMCGFNELWT*TLMSDK
Trigger: TTTATCTGACATCAAAGTCAAAGTCCAGAGCTCATT...GAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACTGCCGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AGTCTGAATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTCTGAATGTATTCCCTTaGAAATGCAGCAGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: SLNLRSISNVYPCVDSEGLNVFP*KCSSFG
Trigger: ACCAAAGCTGCTGCATTTCAAAGGGAATACATTCAG...ACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATTCAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACGCAATCGGGTTGCTCTaGATGATGTATGCATCTTCG +
Preference number: 5 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYAIGLL*MMYASS
Trigger: CGAAGATGCATACATCATCAAGAGCAACCCGATTGC...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp CATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTAATGAGCTCTGGACTTaGACTTTGATGTCAGATAAA +
Preference number: 5 (lower is better)
Translates to: HIQCLPMCGFRGYSGVLFNELWT*TLMSDK
Trigger: TTTATCTGACATCAAAGTCAAAGTCCAGAGCTCATT...AAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp ATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGGTTCTCTTTTTCAATGAGCTCTGGACTTaGACTTTGATGTCAGATAAA +
Preference number: 5 (lower is better)
Translates to: IQCLPMCGFRGYSGVLFFNELWT*TLMSDK
Trigger: TTTATCTGACATCAAAGTCAAAGTCCAGAGCTCATT...GAAAAAGAGAACCCCGCTATACCCTCTGAATCCACACATGGGTAGACATTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACATCTGTTCATGGCCTTaGAGCTGCCGAATGCAGATT +
Preference number: 5 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYICSWP*SCRMQI
Trigger: AATCTGCATTCGGCAGCTCAAAGGCCATGAACAGAT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp AATTTGAGGAGCATATCCAATGTCTACCCATGTGTGGATTCAGAGGGTATAGCGGGCATTCTCAATGCTTaGGGGTTTTATTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: NLRSISNVYPCVDSEGIAGILNA*GFYFMK
Trigger: CTTCATGAAATAAAACCCCAAAGCATTGAGAATGCC...CGCTATACCCTCTGAATCCACACATGGGTAGACATTGGATATGCTCCTCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
CDS-3UTR CAA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACATGTCAGATAAAGGATaGAAGAGTGAGGACTCTGTC +
Preference number: 5 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYMSDKG*KSEDSV
Trigger: GACAGAGTCCTCACTCTTCAATCCTTTATCTGACAT...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACTGGATGTACGGCGTTTaGTTTCTGGGATGTATTGTA +
Preference number: 5 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYWMYGV*FLGCIV
Trigger: TACAATACATCCCAGAAACAAAACGCCGTACATCCA...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS-3UTR CAA 90 bp TGCCTTCCCGGCTTTATTGTTGTGTATCTGGTTTTCAAAACTACTTGTATCTACCTGAATGTATTCCCTTaGAAATGCAGCAGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: CLPGFIVVYLVFKTTCIYLNVFP*KCSSFG
Trigger: ACCAAAGCTGCTGCATTTCAAAGGGAATACATTCAG...GTAGATACAAGTAGTTTTGAAAACCAGATACACAACAATAAAGCCGGGAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 72 bp GCCGAATGCAGATTTTGCAGGACAGCTGGGTGGTGGTaGGCGTGTAGCGCTCCAGGGAGAAGGCACAGTGCA +
Preference number: 6 (lower is better)
Translates to: AECRFCRTAGWW*ACSAPGRRHSA
Trigger: TGCACTGTGCCTTCTCCCTGGAGCGCTACACGCCCACCACCACCCAGCTGTCCTGCAAAATCTGCATTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS GCA 72 bp GACACCAATGACCAGGACCGCAACAGCTACCACGGCTaGACCCAAGCCGGAGTACAAAGCAATGTCGCTGGC +
Preference number: 6 (lower is better)
Translates to: DTNDQDRNSYHG*TQAGVQSNVAG
Trigger: GCCAGCGACATTGCTTTGTACTCCGGCTTGGGTGCAGCCGTGGTAGCTGTTGCGGTCCTGGTCATTGGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS GCA 72 bp GAGGACTCTGTCATGAGCTCCTTGTCGAGCGGATCCTaGAGACAGATGGGCCCGCTGTATGTCCGGCTCACA +
Preference number: 6 (lower is better)
Translates to: EDSVMSSLSSGS*RQMGPLYVRLT
Trigger: TGTGAGCCGGACATACAGCGGGCCCATCTGTCTGCAGGATCCGCTCGACAAGGAGCTCATGACAGAGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS GCA 72 bp ACCTCTGCTGCTGGAACTCCCTCTGGCGGGCGACAATaGAGCACGATCATGCCTTCAATAGGAACCTCCCTG +
Preference number: 6 (lower is better)
Translates to: TSAAGTPSGGRQ*STIMPSIGTSL
Trigger: CAGGGAGGTTCCTATTGAAGGCATGATCGTGCTGCATTGTCGCCCGCCAGAGGGAGTTCCAGCAGCAGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 72 bp CGGTTGCTGCTCCACACTCGGGAGAAGGGGACTTCCTaGCATGCAGTGAACGGTTTGATCCTCCAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: RLLLHTREKGTS*HAVNGLILQRK
Trigger: CTTCCTCTGGAGGATCAAACCGTTCACTGCATGCCAGGAAGTCCCCTTCTCCCGAGTGTGGAGCAGCAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS GCA 72 bp GGTTGTTTCCATGGGGGAAAGTCCCCGAGTGATTCTTaGCATGGTACTCCGCTCTCTCAGACACTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: GCFHGGKSPSDS*HGTPLSQTLPG
Trigger: CCCTGGGAGTGTCTGAGAGAGCGGAGTACCATGGCAAGAATCACTCGGGGACTTTCCCCCATGGAAACAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CAA 72 bp CGGGAGAAGGGGACTTCCTGGCATGCAGTGAACGGTTaGATCCTCCAGAGGAAGGGAGGGATGTCAAGGACA +
Preference number: 6 (lower is better)
Translates to: REKGTSWHAVNG*ILQRKGGMSRT
Trigger: TGTCCTTGACATCCCTCCCTTCCTCTGGAGGATCAAACCGTTCACTGCATGCCAGGAAGTCCCCTTCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS TCA 72 bp CTGGGTCCTCTTCTTCAGGTGAATGTTCCAGTGCTCTaGACTGACGTCTGCACAGTGAGGGATGGTCAGCGC +
Preference number: 6 (lower is better)
Translates to: LGPLLQVNVPVL*TDVCTVRDGQR
Trigger: GCGCTGACCATCCCTCACTGTGCAGACGTCAGTTCAGAGCACTGGAACATTCACCTGAAGAAGAGGACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS GCA 72 bp CACAGAACTTGCCCCCATTTCTTGGGGGTGGAGCTGTaGACTCACGGATACGAAGATGTTCACACTCTGGGC +
Preference number: 6 (lower is better)
Translates to: HRTCPHFLGVEL*THGYEDVHTLG
Trigger: GCCCAGAGTGTGAACATCTTCGTATCCGTGAGTGCACAGCTCCACCCCCAAGAAATGGGGGCAAGTTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 72 bp CTCCTCGATGAAATGAGGCAGCGTTCCAGGGGCAGATaGGATAGAGTCGGGAAGAATTTCACTGCCATCGGC +
Preference number: 6 (lower is better)
Translates to: LLDEMRQRSRGR*DRVGKNFTAIG
Trigger: GCCGATGGCAGTGAAATTCTTCCCGACTCTATCCCATCTGCCCCTGGAACGCTGCCTCATTTCATCGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 72 bp TTTCAGCCATTCCACCTCTGCTGCTGGAACTCCCTCTaGCGGGCGACAATGCAGCACGATCATGCCTTCAAT +
Preference number: 6 (lower is better)
Translates to: FQPFHLCCWNSL*RATMQHDHAFN
Trigger: ATTGAAGGCATGATCGTGCTGCATTGTCGCCCGCCAGAGGGAGTTCCAGCAGCAGAGGTGGAATGGCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 72 bp CGTAGACCACCACAGTTGCTGAGAGGCTCCTCCTCTTaGCCACGATGTTGGCTGCCATACAGGTGTAATTCC +
Preference number: 6 (lower is better)
Translates to: RRPPQLLRGSSS*PRCWLPYRCNS
Trigger: GGAATTACACCTGTATGGCAGCCAACATCGTGGCCAAGAGGAGGAGCCTCTCAGCAACTGTGGTGGTCTACG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 72 bp CTGGCTGAGACCTTCACAGAACTTGCCCCCATTTCTTaGGGGTGGAGCTGTGCACTCACGGATACGAAGATG +
Preference number: 6 (lower is better)
Translates to: LAETFTELAPIS*GWSCALTDTKM
Trigger: CATCTTCGTATCCGTGAGTGCACAGCTCCACCCCCAAGAAATGGGGGCAAGTTCTGTGAAGGTCTCAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 72 bp CGGCTGCACCCAAGCCGGAGTACAAAGCAATGTCGCTaGCATTCTCAATGCCTCTCCTACTCCATCTTTGGG +
Preference number: 6 (lower is better)
Translates to: RLHPSRSTKQCR*HSQCLSYSIFG
Trigger: CCCAAAGATGGAGTAGGAGAGGCATTGAGAATGCCAGCGACATTGCTTTGTACTCCGGCTTGGGTGCAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS CAA 72 bp GGCCCATGGAAGTCCTCCACTTGCTGCCTGGTGACATaGATAAACACTTCCCGGACCTTCAAGCCTGAGCTC +
Preference number: 6 (lower is better)
Translates to: GPWKSSTCCLVT*INTSRTFKPEL
Trigger: GAGCTCAGGCTTGAAGGTCCGGGAAGTGTTTATCAATGTCACCAGGCAGCAAGTGGAGGACTTCCATGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CAA 72 bp GCACCAGTAGTCCTCTGGCCCATGGAAGTCCTCCACTaGCTGCCTGGTGACATTGATAAACACTTCCCGGAC +
Preference number: 6 (lower is better)
Translates to: APVVLWPMEVLH*LPGDIDKHFPD
Trigger: GTCCGGGAAGTGTTTATCAATGTCACCAGGCAGCAAGTGGAGGACTTCCATGGGCCAGAGGACTACTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CAA 72 bp AAAGGATTGAAGAGTGAGGACTCTGTCATGAGCTCCTaGTCGAGCGGATCCTGCAGACAGATGGGCCCGCTG +
Preference number: 6 (lower is better)
Translates to: KGLKSEDSVMSS*SSGSCRQMGPL
Trigger: CAGCGGGCCCATCTGTCTGCAGGATCCGCTCGACAAGGAGCTCATGACAGAGTCCTCACTCTTCAATCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS TCA 72 bp TTTCTGCCATCCTCTACCACAGCGAACATTGCAGGCTaGCCACTCTGTCCAGGAAGACCAGCCTCCATTCAC +
Preference number: 6 (lower is better)
Translates to: FLPSSTTANIAG*PLCPGRPASIH
Trigger: GTGAATGGAGGCTGGTCTTCCTGGACAGAGTGGTCAGCCTGCAATGTTCGCTGTGGTAGAGGATGGCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS TCA 72 bp ACGGATACGAAGATGTTCACACTCTGGGCTGCAGACTaGCCATTCACTCCACACTTCCCAGCTGCCATCCAC +
Preference number: 6 (lower is better)
Translates to: TDTKMFTLWAAD*PFTPHFPAAIH
Trigger: GTGGATGGCAGCTGGGAAGTGTGGAGTGAATGGTCAGTCTGCAGCCCAGAGTGTGAACATCTTCGTATCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS GCA 72 bp TGCACTCACGGATACGAAGATGTTCACACTCTGGGCTaGAGACTGACCATTCACTCCACACTTCCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: CTHGYEDVHTLG*RLTIHSTLPSC
Trigger: GCAGCTGGGAAGTGTGGAGTGAATGGTCAGTCTGCAGCCCAGAGTGTGAACATCTTCGTATCCGTGAGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS GCA 72 bp GGCCCGCTGTATGTCCGGCTCACAGTCAGATCTGGCTaGATGGCAGGATTCAGTAGTAGAGAATTTCCTGTC +
Preference number: 6 (lower is better)
Translates to: GPLYVRLTVRSG*MAGFSSREFPV
Trigger: GACAGGAAATTCTCTACTACTGAATCCTGCCATGCAGCCAGATCTGACTGTGAGCCGGACATACAGCGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000209401.2
ENSMUST00000210785.2
CDS CCA 72 bp CGGCTGCACCCAAGCCGGAGTACAAAGCAATGTCGCTaGCATTCTCAATGCCTAGAATGCAGAGACCATCTG +
Preference number: 6 (lower is better)
Translates to: RLHPSRSTKQCR*HSQCLECRDHL
Trigger: CAGATGGTCTCTGCATTCTAGGCATTGAGAATGCCAGCGACATTGCTTTGTACTCCGGCTTGGGTGCAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211448.2
CDS CAA 72 bp ATGGCTGGCCTTGCTTTGCACCTGAGTGCAATCGGGTaGCTCTTGATGATGTATGCATCTTCGGGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: MAGLALHLSAIG*LLMMYASSGSS
Trigger: CGAGGAGCCCGAAGATGCATACATCATCAAGAGCAACCCGATTGCACTCAGGTGCAAAGCAAGGCCAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CAA 90 bp ATGTCAGATAAAGGATTGAAGAGTGAGGACTCTGTCATGAGCTCCTaGTCGAGCGGATCCTGCAGACAGATGGGCCCGCTGTATGTCCGG +
Preference number: 6 (lower is better)
Translates to: MSDKGLKSEDSVMSS*SSGSCRQMGPLYVR
Trigger: CCGGACATACAGCGGGCCCATCTGTCTGCAGGATCCGCTCGACAAGGAGCTCATGACAGAGTCCTCACTCTTCAATCCTTTATCTGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CAA 90 bp CTCTCTAGGATGGATGTCTGCACTTGGAGGATCTGTTCATGGCCTTaGAGCTGCCGAATGCAGATTTTGCAGGACAGCTGGGTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: LSRMDVCTWRICSWP*SCRMQILQDSWVVV
Trigger: CACCACCACCCAGCTGTCCTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCAAGTGCAGACATCCATCCTAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS TCA 72 bp GGTGACATTGATAAACACTTCCCGGACCTTCAAGCCTaGGCTCTCATCCAGGCTCTCCTCGGACACATGTTC +
Preference number: 6 (lower is better)
Translates to: GDIDKHFPDLQA*ALIQALLGHMF
Trigger: GAACATGTGTCCGAGGAGAGCCTGGATGAGAGCTCAGGCTTGAAGGTCCGGGAAGTGTTTATCAATGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS TCA 72 bp AGGTCTGGAAGCCACCTGTCAATGCAGAAGAGTCAATaGCATCCACTCCGTAGTCACTGTGGCTCCGTCTGT +
Preference number: 6 (lower is better)
Translates to: RSGSHLSMQKSQ*HPLRSHCGSVC
Trigger: ACAGACGGAGCCACAGTGACTACGGAGTGGATGTCATTGACTCTTCTGCATTGACAGGTGGCTTCCAGACCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000168630.4
ENSMUST00000210298.2
ENSMUST00000211448.2
CDS GCA 72 bp GCACCTGAGTGCAATCGGGTTGCTCTTGATGATGTATaGATCTTCGGGCTCCTCGATGAAATGAGGCAGCGT +
Preference number: 6 (lower is better)
Translates to: APECNRVALDDV*IFGLLDEMRQR
Trigger: ACGCTGCCTCATTTCATCGAGGAGCCCGAAGATGCATACATCATCAAGAGCAACCCGATTGCACTCAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 72 bp GAGTCTGACAGCCGGGCCTGTCTGATGATCAAGTTATaGTCAGCCCTGGTGTCAATGTTCTCATCCTGTTCG +
Preference number: 6 (lower is better)
Translates to: ESDSRACLMIKL*SALVSMFSSCS
Trigger: CGAACAGGATGAGAACATTGACACCAGGGCTGACCATAACTTGATCATCAGACAGGCCCGGCTGTCAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 72 bp GACAGGCAAAGGGATCCAAGAGGCAGTAACAGGATGTaGACTCATCCTCCACTGACATCACTTCCTCCCACT +
Preference number: 6 (lower is better)
Translates to: DRQRDPRGSNRM*THPPLTSLPPT
Trigger: AGTGGGAGGAAGTGATGTCAGTGGAGGATGAGTCCACATCCTGTTACTGCCTCTTGGATCCCTTTGCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS TCA 72 bp TGCAGAGACCATCTGTGCAGTTTTCAGATTCCTGGCTaGGACCTTCACAGAACTTGCCCCCATTTCTTGGGG +
Preference number: 6 (lower is better)
Translates to: CRDHLCSFQIPG*DLHRTCPHFLG
Trigger: CCCCAAGAAATGGGGGCAAGTTCTGTGAAGGTCTCAGCCAGGAATCTGAAAACTGCACAGATGGTCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CAA 72 bp GGCCTTGCTTTGCACCTGAGTGCAATCGGGTTGCTCTaGATGATGTATGCATCTTCGGGCTCCTCGATGAAA +
Preference number: 6 (lower is better)
Translates to: GLALHLSAIGLL*MMYASSGSSMK
Trigger: TTTCATCGAGGAGCCCGAAGATGCATACATCATCAAGAGCAACCCGATTGCACTCAGGTGCAAAGCAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CAA 72 bp AATGGCCAAAGACACCAGTTGTCCTCAGCTCTGTCCTaGTCGGCAGTGATGACAGATTTTGGATGTACGGCG +
Preference number: 6 (lower is better)
Translates to: NGQRHQLSSALS*SAVMTDFGCTA
Trigger: CGCCGTACATCCAAAATCTGTCATCACTGCCGACAAGGACAGAGCTGAGGACAACTGGTGTCTTTGGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CAA 72 bp TTACTAAGCGTCCCCCTAAATGGCCAAAGACACCAGTaGTCCTCAGCTCTGTCCTTGTCGGCAGTGATGACA +
Preference number: 6 (lower is better)
Translates to: LLSVPLNGQRHQ*SSALSLSAVMT
Trigger: TGTCATCACTGCCGACAAGGACAGAGCTGAGGACAACTGGTGTCTTTGGCCATTTAGGGGGACGCTTAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CAA 72 bp ATGGATGTCTGCACTTGGAGGATCTGTTCATGGCCTTaGAGCTGCCGAATGCAGATTTTGCAGGACAGCTGG +
Preference number: 6 (lower is better)
Translates to: MDVCTWRICSWP*SCRMQILQDSW
Trigger: CCAGCTGTCCTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCAAGTGCAGACATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS GCA 72 bp GTGATGGTTTCTCGTTCACTCTCTAGGATGGATGTCTaGACTTGGAGGATCTGTTCATGGCCTTTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: VMVSRSLSRMDV*TWRICSWPLSC
Trigger: GCAGCTCAAAGGCCATGAACAGATCCTCCAAGTGCAGACATCCATCCTAGAGAGTGAACGAGAAACCATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 72 bp ACCCCTGTATTTGGCATTACTAAGCGTCCCCCTAAATaGCCAAAGACACCAGTTGTCCTCAGCTCTGTCCTT +
Preference number: 6 (lower is better)
Translates to: TPVFGITKRPPK*PKTPVVLSSVL
Trigger: AAGGACAGAGCTGAGGACAACTGGTGTCTTTGGCCATTTAGGGGGACGCTTAGTAATGCCAAATACAGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 72 bp TCTAGGATGGATGTCTGCACTTGGAGGATCTGTTCATaGCCTTTGAGCTGCCGAATGCAGATTTTGCAGGAC +
Preference number: 6 (lower is better)
Translates to: SRMDVCTWRICS*PLSCRMQILQD
Trigger: GTCCTGCAAAATCTGCATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCAAGTGCAGACATCCATCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CCA 72 bp GTTTCTCGTTCACTCTCTAGGATGGATGTCTGCACTTaGAGGATCTGTTCATGGCCTTTGAGCTGCCGAATG +
Preference number: 6 (lower is better)
Translates to: VSRSLSRMDVCT*RICSWPLSCRM
Trigger: CATTCGGCAGCTCAAAGGCCATGAACAGATCCTCCAAGTGCAGACATCCATCCTAGAGAGTGAACGAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS GCA 72 bp ACACTTCCCAGCTGCCATCCACAGGACAAAGAGCAGTaGAGGTTATTTTCTGCACTGACATTCCCTCACAAA +
Preference number: 6 (lower is better)
Translates to: TLPSCHPQDKEQ*RLFSALTFPHK
Trigger: TTTGTGAGGGAATGTCAGTGCAGAAAATAACCTGCACTGCTCTTTGTCCTGTGGATGGCAGCTGGGAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168630.4
ENSMUST00000210785.2
CDS CCA 72 bp CCTCTGTCTGATGGAATAGGGAATTTTGAAGGCTTTTaGGCCAGTCTGTGCAGGAAAGGTACTGTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: PLSDGIGNFEGF*ASLCRKGTVLL
Trigger: CAAGAGGACAGTACCTTTCCTGCACAGACTGGCCCAAAAGCCTTCAAAATTCCCTATTCCATCAGACAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CAA 90 bp TATTTGGCATTACTAAGCGTCCCCCTAAATGGCCAAAGACACCAGTaGTCCTCAGCTCTGTCCTTGTCGGCAGTGATGACAGATTTTGGA +
Preference number: 6 (lower is better)
Translates to: YLALLSVPLNGQRHQ*SSALSLSAVMTDFG
Trigger: TCCAAAATCTGTCATCACTGCCGACAAGGACAGAGCTGAGGACAACTGGTGTCTTTGGCCATTTAGGGGGACGCTTAGTAATGCCAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CAA 90 bp TCTGTCCTTGTCGGCAGTGATGACAGATTTTGGATGTACGGCGTTTaGTTTCTGGGATGTATTGTACTGAATCCGCGGTTGTTTCCATGG +
Preference number: 6 (lower is better)
Translates to: SVLVGSDDRFWMYGV*FLGCIVLNPRLFPW
Trigger: CCATGGAAACAACCGCGGATTCAGTACAATACATCCCAGAAACAAAACGCCGTACATCCAAAATCTGTCATCACTGCCGACAAGGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS TCA 72 bp GTGCAGGAAAGGTACTGTCCTCTTGTGCGAAGAAAGTaGTGGTTTCTCGTTCACTCTCTAGGATGGATGTCT +
Preference number: 6 (lower is better)
Translates to: VQERYCPLVRRK*WFLVHSLGWMS
Trigger: AGACATCCATCCTAGAGAGTGAACGAGAAACCATCACTTTCTTCGCACAAGAGGACAGTACCTTTCCTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS GCA 72 bp GCCTTGGTGCCGTTCGTCAGAAATCACTTCCTGAAATaGACAAGGAGTATTGTCCACACAGTAAACTCTCAG +
Preference number: 6 (lower is better)
Translates to: ALVPFVRNHFLK*TRSIVHTVNSQ
Trigger: CTGAGAGTTTACTGTGTGGACAATACTCCTTGTGCATTTCAGGAAGTGATTTCTGACGAACGGCACCAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CAA 72 bp GTCGGCAGTGATGACAGATTTTGGATGTACGGCGTTTaGTTTCTGGGATGTATTGTACTGAATCCGCGGTTG +
Preference number: 6 (lower is better)
Translates to: VGSDDRFWMYGV*FLGCIVLNPRL
Trigger: CAACCGCGGATTCAGTACAATACATCCCAGAAACAAAACGCCGTACATCCAAAATCTGTCATCACTGCCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS GCA 72 bp AGCCGGAGTACAAAGCAATGTCGCTGGCATTCTCAATaGCTCTCCTACTCCATCTTTGGGGTTTTATTTCAT +
Preference number: 6 (lower is better)
Translates to: SRSTKQCRWHSQ*LSYSIFGVLFH
Trigger: ATGAAATAAAACCCCAAAGATGGAGTAGGAGAGGCATTGAGAATGCCAGCGACATTGCTTTGTACTCCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168630.4
CDS CAA 72 bp TTGAAGTCAGCATCATCAATCTGTGGCTCTGTGATGTaGGATAGTTTCGTGTGTGTCCTCCCAATCTCCTCA +
Preference number: 6 (lower is better)
Translates to: LKSASSICGSVM*DSFVCVLPISS
Trigger: TGAGGAGATTGGGAGGACACACACGAAACTATCCAACATCACAGAGCCACAGATTGATGATGCTGACTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2
CDS CAA 90 bp TCAGACACTCCCAGGGAAACCATAAATGAGCTCTGGACTTTGACTTaGATGTCAGATAAAGGATTGAAGAGTGAGGACTCTGTCATGAGC +
Preference number: 6 (lower is better)
Translates to: SDTPRETINELWTLT*MSDKGLKSEDSVMS
Trigger: GCTCATGACAGAGTCCTCACTCTTCAATCCTTTATCTGACATCAAAGTCAAAGTCCAGAGCTCATTTATGGTTTCCCTGGGAGTGTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000168630.4
ENSMUST00000209401.2
ENSMUST00000210298.2
ENSMUST00000210785.2
ENSMUST00000211448.2