Pregenerated sensors for UNC5C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059921Ensembl transcript IDs: ENSMUST00000075282.10, ENSMUST00000106236.9, ENSMUST00000130636.8, ENSMUST00000142762.2
Found 486 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGCGTGTACCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTaGCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: WACTLVVISVPQVSC*HLACRAPWSYLDFL Trigger: GAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGGTACACGCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| 3UTR CCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTaGATTTCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: KFPVAILPVERLGPI*ISSSDVVPLNTDSL Trigger: CAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| 3UTR GCA 90 bp | CACAGCAAGCAAGGCATTCCTGAGAAGCTCTGTAGAAGTCAGACATaGCACAGGGGTGATGATGAAGCTCCCTCTAAGATGAACTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: HSKQGIPEKLCRSQT*HRGDDEAPSKMNCG Trigger: GCCACAGTTCATCTTAGAGGGAGCTTCATCATCACCCCTGTGGCATGTCTGACTTCTACAGAGCTTCTCAGGAATGCCTTGCTTGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR GCA 90 bp | GGTCTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTaGCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: GLEILVVISVPQVSC*HLACRAPWSYLDFL Trigger: GAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
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| 3UTR CCA 90 bp | TACACAATTTTTCTTAACTCCCGCGGTGGTGCTGTCCGAATGAAGTaGGCGTGTACCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: YTIFLNSRGGAVRMK*ACTLVVISVPQVSC Trigger: ACAGGAAACTTGGGGGACAGATATAACCACCAAGGTACACGCCCACTTCATTCGGACAGCACCACCGCGGGAGTTAAGAAAAATTGTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| 3UTR TCA 90 bp | TCTGGTCTCACCACAAAGTTTACAAAGAAGGGCAATGAGCGCCAGTaGGTTTCAATGTTTTCCCCAAAGTCACACAGCCATACAGGGACC | + |
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Preference number: 1 (lower is better) Translates to: SGLTTKFTKKGNERQ*VSMFSPKSHSHTGT Trigger: GGTCCCTGTATGGCTGTGTGACTTTGGGGAAAACATTGAAACTCACTGGCGCTCATTGCCCTTCTTTGTAAACTTTGTGGTGAGACCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR TCA 90 bp | AAATTTACACAATTTTTCTTAACTCCCGCGGTGGTGCTGTCCGAATaGAGTGGGCGTGTACCTTGGTGGTTATATCTGTCCCCCAAGTTT | + |
|
Preference number: 1 (lower is better) Translates to: KFTQFFLTPAVVLSE*SGRVPWWLYLSPKF Trigger: AAACTTGGGGGACAGATATAACCACCAAGGTACACGCCCACTTCATTCGGACAGCACCACCGCGGGAGTTAAGAAAAATTGTGTAAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| 3UTR TCA 90 bp | CTTGAGATGATCTGGTCTCACCACAAAGTTTACAAAGAAGGGCAATaGGCGCCAGTGAGTTTCAATGTTTTCCCCAAAGTCACACAGCCA | + |
|
Preference number: 1 (lower is better) Translates to: LEMIWSHHKVYKEGQ*APVSFNVFPKVTQP Trigger: TGGCTGTGTGACTTTGGGGAAAACATTGAAACTCACTGGCGCTCATTGCCCTTCTTTGTAAACTTTGTGGTGAGACCAGATCATCTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR CCA 90 bp | ATTCAGCTGCATGGGCTTTTTGTAGAAATGGTCTTGAGATCTTGGTaGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGCCTGTA | + |
|
Preference number: 1 (lower is better) Translates to: IQLHGLFVEMVLRSW*LYLSPKFPVAILPV Trigger: TACAGGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAGACCATTTCTACAAAAAGCCCATGCAGCTGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
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| 3UTR TCA 90 bp | ATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATaGATAGCTACCTCCCCTGTAATGCTAGAGCTCTGTTCCCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: ITNTHVVQKCLCGGT*IATSPVMLELCSQR Trigger: CCTTTGGGAACAGAGCTCTAGCATTACAGGGGAGGTAGCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| 3UTR CCA 90 bp | AGGTCGCCACTTACATCTCTTTGGCTTTGCCTGCTAGTATATTTATaGAGTGCATCTATTTGTCCTGAGGATACCCCAGCCACAATTAAA | + |
|
Preference number: 1 (lower is better) Translates to: RSPLTSLWLCLLVYL*SASICPEDTPATIK Trigger: TTTAATTGTGGCTGGGGTATCCTCAGGACAAATAGATGCACTCCATAAATATACTAGCAGGCAAAGCCAAAGAGATGTAAGTGGCGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR TCA 90 bp | AGTTACACAGAACATCCAGTCCAGACCTCTCAGTTTGGATTTCTTTaGTGGTTCCAAAATCCAAGAAGTGTAGAGGAACCTTCACACTTG | + |
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Preference number: 1 (lower is better) Translates to: SYTEHPVQTSQFGFL*WFQNPRSVEEPSHL Trigger: CAAGTGTGAAGGTTCCTCTACACTTCTTGGATTTTGGAACCATCAAAGAAATCCAAACTGAGAGGTCTGGACTGGATGTTCTGTGTAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR GCA 90 bp | AGTATACTGAAGACTTGCAGGTCGCCACTTACATCTCTTTGGCTTTaGCTGCTAGTATATTTATGGAGTGCATCTATTTGTCCTGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: SILKTCRSPLTSLWL*LLVYLWSASICPED Trigger: ATCCTCAGGACAAATAGATGCACTCCATAAATATACTAGCAGGCAAAGCCAAAGAGATGTAAGTGGCGACCTGCAAGTCTTCAGTATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR CCA 90 bp | CAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATaGAATCCATTCAGCAACCTGAATACTTCTAGCCCCAAAGTACAC | + |
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Preference number: 1 (lower is better) Translates to: QEVTESEGIRQNDSQ*NPFSNLNTSSPKVH Trigger: GTGTACTTTGGGGCTAGAAGTATTCAGGTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| 3UTR TCA 90 bp | AAAAGGATGATGACATTTGAATGGGAGATCAGCATTCTGGAACCTTaGGATGATCTGGTCTCACCACAAAGTTTACAAAGAAGGGCAATG | + |
|
Preference number: 1 (lower is better) Translates to: KRMMTFEWEISILEP*DDLVSPQSLQRRAM Trigger: CATTGCCCTTCTTTGTAAACTTTGTGGTGAGACCAGATCATCTCAAGGTTCCAGAATGCTGATCTCCCATTCAAATGTCATCATCCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR CCA 90 bp | AAAGCATTGAAGTTACACAGAACATCCAGTCCAGACCTCTCAGTTTaGATTTCTTTGATGGTTCCAAAATCCAAGAAGTGTAGAGGAACC | + |
|
Preference number: 1 (lower is better) Translates to: KALKLHRTSSPDLSV*ISLMVPKSKKCRGT Trigger: GGTTCCTCTACACTTCTTGGATTTTGGAACCATCAAAGAAATCCAAACTGAGAGGTCTGGACTGGATGTTCTGTGTAACTTCAATGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR TCA 90 bp | CTGGTTCCTTACAGCTCAACATTAAGCTTAATAAACACAACACTGTaGCATCTTACACACACATACACACACACACACATACACACAGTA | + |
|
Preference number: 1 (lower is better) Translates to: LVPYSSTLSLINTTL*HLTHTYTHTHIHTV Trigger: TACTGTGTGTATGTGTGTGTGTGTGTATGTGTGTGTAAGATGTCACAGTGTTGTGTTTATTAAGCTTAATGTTGAGCTGTAAGGAACCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR GCA 90 bp | TCTTGGGATAGATACCTTCATATAAAGTTTAGTATACTGAAGACTTaGAGGTCGCCACTTACATCTCTTTGGCTTTGCCTGCTAGTATAT | + |
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Preference number: 1 (lower is better) Translates to: SWDRYLHIKFSILKT*RSPLTSLWLCLLVY Trigger: ATATACTAGCAGGCAAAGCCAAAGAGATGTAAGTGGCGACCTGCAAGTCTTCAGTATACTAAACTTTATATGAAGGTATCTATCCCAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR CCA 90 bp | CCAAATTATCCTTTCCCAGAAGAGATTAATTTGCTCAGGTCAGGATaGAATTCTTTGTGTAGCAGAGACAATGTGTCTGCTTTGAAAATG | + |
|
Preference number: 1 (lower is better) Translates to: PNYPFPEEINLLRSG*NSLCSRDNVSALKM Trigger: CATTTTCAAAGCAGACACATTGTCTCTGCTACACAAAGAATTCCATCCTGACCTGAGCAAATTAATCTCTTCTGGGAAAGGATAATTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR TCA 90 bp | ATACCAATGCCAATACTGGTCCAACAAGTTTCAGAAACAGAACACTaGTGGGAAGATTATCTGAGACACTTGATGTACATGATTTTTAGC | + |
|
Preference number: 1 (lower is better) Translates to: IPMPILVQQVSETEH*WEDYLRHLMYMIFS Trigger: GCTAAAAATCATGTACATCAAGTGTCTCAGATAATCTTCCCATCAGTGTTCTGTTTCTGAAACTTGTTGGACCAGTATTGGCATTGGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| 3UTR TCA 90 bp | ACCATCTACTCTCTTCCAGATGTGAACTGTCTAAATCCTACCCTCTaGGTGTTTCCCTTTCAATCATTTTTAGGAGAAATGTCCTTAAAA | + |
|
Preference number: 1 (lower is better) Translates to: TIYSLPDVNCLNPTL*VFPFQSFLGEMSLK Trigger: TTTTAAGGACATTTCTCCTAAAAATGATTGAAAGGGAAACACTCAGAGGGTAGGATTTAGACAGTTCACATCTGGAAGAGAGTAGATGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR CCA 90 bp | GGACTAGGAACAAGTGAAAGAAAGAATGCGAGTCATGTCTTCAACTaGCTCCTCTTTCTTTCCAATAATCTGGAGAAAAATATATCTGAA | + |
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Preference number: 1 (lower is better) Translates to: GLGTSERKNASHVFN*LLFLSNNLEKNISE Trigger: TTCAGATATATTTTTCTCCAGATTATTGGAAAGAAAGAGGAGCCAGTTGAAGACATGACTCGCATTCTTTCTTTCACTTGTTCCTAGTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR-3UTR TCA 90 bp | GAAAAGAGGCACACCCAAAGCCGGTACACCTCAACCACACAGCAAGGCGATGAGATGAACTGTGGCAGGTaGAACGTGTGTGTTGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: EKRHTQSRYTSTTQQGDEMNCGR*NVCVGK Trigger: CTTTCCAACACACACGTTTCACCTGCCACAGTTCAT...CTCATCGCCTTGCTGTGTGGTTGAGGTGTACCGGCTTTGGGTGTGCCTCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR CAA 90 bp | AGAGTAAATGCAGGCAGTTTACAAACCAAGGGGACGGCAGGTAAATaGGGTGAGGCAACCAGAGAGAGAAAAGAGGCACACCCAAAGCCG | + |
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Preference number: 2 (lower is better) Translates to: RVNAGSLQTKGTAGK*GEATRERKEAHPKP Trigger: CGGCTTTGGGTGTGCCTCTTTTCTCTCTCTGGTTGCCTCACCCAATTTACCTGCCGTCCCCTTGGTTTGTAAACTGCCTGCATTTACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR CAA 90 bp | GTACCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTaGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: VPWWLYLSPKFPVAI*PVERLGPIWISSSD Trigger: ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| 3UTR CAA 90 bp | GTCTCGAGCCTAAGTCCACCCACACTGTGTTTCTGTAATCCTCCTTaGCCACCACTGGCCTTGGACTTACACCAGCACATATCTCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: VSSLSPPTLCFCNPP*PPLALDLHQHISLN Trigger: ATTCAGAGATATGTGCTGGTGTAAGTCCAAGGCCAGTGGTGGCAAAGGAGGATTACAGAAACACAGTGTGGGTGGACTTAGGCTCGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR CAA 90 bp | AGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTaGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: RSWWLYLSPKFPVAI*PVERLGPIWISSSD Trigger: ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAAGAGGCACACCCAAAGCCGGTACACCTCAACCACACAGCAAGGCGATGAGACCAGCACATATCTCTaGATAGATTACTTTTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: EKRHTQSRYTSTTQQGDETSTYL*IDYFSR Trigger: TCTGGAAAAGTAATCTATTCAGAGATATGTGCTGGT...CTCATCGCCTTGCTGTGTGGTTGAGGTGTACCGGCTTTGGGTGTGCCTCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR-3UTR GCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCACCCCAAGTTTCCTGTTaGCATCTTGCCTGTAGAGCG | + |
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Preference number: 2 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPPQVSC*HLACRA Trigger: CGCTCTACAGGCAAGATGGCAACAGGAAACTTGGGG...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| 3UTR-3UTR TCA 90 bp | GTAACTAGTGGGTTTGGCCATGACTGTCCTGATATATGGCAAGGGTTTCCAATGGATTCTCCACTTCCCTaGTACCAATGCCAATACTGG | + |
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Preference number: 2 (lower is better) Translates to: VTSGFGHDCPDIWQGFPMDSPLP*YQCQYW Trigger: CCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATC...CATTGGAAACCCTTGCCATATATCAGGACAGTCATGGCCAAACCCACTAGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGTAAATGCAGGCAGTTTACAAACCAAGGGGACGGCAGGTAAATTGGGTGAGTGTAGAAGTCAGACATaGCACAGGGGTGATGATGAA | + |
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Preference number: 2 (lower is better) Translates to: RVNAGSLQTKGTAGKLGECRSQT*HRGDDE Trigger: TTCATCATCACCCCTGTGGCATGTCTGACTTCTACA...CTCACCCAATTTACCTGCCGTCCCCTTGGTTTGTAAACTGCCTGCATTTACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR-3UTR CCA 90 bp | GAAAAGAGGCACACCCAAAGCCGGTACACCTCAACCACACAGCAAGGCGATGAGCTGCTAGTATATTTATaGAGTGCATCTATTTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: EKRHTQSRYTSTTQQGDELLVYL*SASICP Trigger: AGGACAAATAGATGCACTCCATAAATATACTAGCAG...CTCATCGCCTTGCTGTGTGGTTGAGGTGTACCGGCTTTGGGTGTGCCTCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCACAGATGTGGTTCCCCTaGACACAGACTCCCTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: QEVTESEGIRQNDSQWNPQMWFP*TQTPCV Trigger: TACACAGGGAGTCTGTGTTCAGGGGAACCACATCTG...TGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGTTCAGACACTGTTCCCACAACCATACTGCCTCCCAGATAGCCACAAGAGTTCAGAAACAGAACACTaGTGGGAAGATTATCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: LVQTLFPQPYCLPDSHKSSETEH*WEDYLR Trigger: TCTCAGATAATCTTCCCATCAGTGTTCTGTTTCTGA...ACTCTTGTGGCTATCTGGGAGGCAGTATGGTTGTGGGAACAGTGTCTGAACTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGTAAATGCAGGCAGTTTACAAACCAAGGGGACGGCAGGTAAATTGGGTGAGAGCAGACATAGCCATTaGGCATTTCTGTCTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: RVNAGSLQTKGTAGKLGESRHSH*AFLSFP Trigger: TGGAAAAGACAGAAATGCTCAATGGCTATGTCTGCT...CTCACCCAATTTACCTGCCGTCCCCTTGGTTTGTAAACTGCCTGCATTTACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGATGTAGGCAACCATCTACTCTCTTCCAGATGTGAACTGTCTAAATCCTACTCTGACCGAGCAAGCTaGAAGAGCAGACATAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: RDVGNHLLSSRCELSKSYSDRAS*KSRHSH Trigger: ATGGCTATGTCTGCTCTTTCAGCTTGCTCGGTCAGA...GTAGGATTTAGACAGTTCACATCTGGAAGAGAGTAGATGGTTGCCTACATCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR-3UTR TCA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCCAGATGTGGTTCCCCTaGACACAGACTCCCTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: NKKRFLGNCKILYHTAYSQMWFP*TQTPCV Trigger: TACACAGGGAGTCTGTGTTCAGGGGAACCACATCTG...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCACTATCCAGATGTGGTTCCCCTaGACACAGACTCCCTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: RCFLFNYVSGAAKFSFTIQMWFP*TQTPCV Trigger: TACACAGGGAGTCTGTGTTCAGGGGAACCACATCTG...GATAGTGAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| 3UTR-3UTR GCA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCCCCCAAGTTTCCTGTTaGCATCTTGCCTGTAGAGCG | + |
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Preference number: 2 (lower is better) Translates to: NKKRFLGNCKILYHTAYSPQVSC*HLACRA Trigger: CGCTCTACAGGCAAGATGGCAACAGGAAACTTGGGG...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCACTATCCCCCAAGTTTCCTGTTaGCATCTTGCCTGTAGAGCG | + |
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Preference number: 2 (lower is better) Translates to: RCFLFNYVSGAAKFSFTIPQVSC*HLACRA Trigger: CGCTCTACAGGCAAGATGGCAACAGGAAACTTGGGG...GATAGTGAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| 3UTR-3UTR CCA 90 bp | AGATGGCACCAGGCACAAATAATTTGTTTTTCTACCCACCCACAGCAAGCAAGGCCCTTCCACAGTCAGTaGGACCAGGATTTTTATATA | + |
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Preference number: 2 (lower is better) Translates to: RWHQAQIICFSTHPQQARPFHSQ*DQDFYI Trigger: TATATAAAAATCCTGGTCCCACTGACTGTGGAAGGG...CCTTGCTTGCTGTGGGTGGGTAGAAAAACAAATTATTTGTGCCTGGTGCCATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR-3UTR GCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCCCCCAAGTTTCCTGTTaGCATCTTGCCTGTAGAGCG | + |
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Preference number: 2 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSPQVSC*HLACRA Trigger: CGCTCTACAGGCAAGATGGCAACAGGAAACTTGGGG...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACCTGAATACTTCTAGCCGCCTTGGTCCTATCTaGATTTCCTCCTCAGATGTG | + |
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Preference number: 2 (lower is better) Translates to: IRQNDSQWNPFSNLNTSSRLGPI*ISSSDV Trigger: CACATCTGAGGAGGAAATCCAGATAGGACCAAGGCG...GCTAGAAGTATTCAGGTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTAAATGCAGGCAGTTTACAAACCAAGGGGACGGCAGGTAAATTGGGTGAGACAGAAATGTTTGTGTaGAGGAACATGAATAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: RVNAGSLQTKGTAGKLGETEMFV*RNMNSY Trigger: GTAGCTATTCATGTTCCTCCACACAAACATTTCTGT...CTCACCCAATTTACCTGCCGTCCCCTTGGTTTGTAAACTGCCTGCATTTACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
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| 3UTR-3UTR TCA 90 bp | GTAACTAGTGGGTTTGGCCATGACTGTCCTGATATATGGCAAGGGTTTCCAATGTGTAGAATACATCTCTaGAAGAGAAGACAAACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: VTSGFGHDCPDIWQGFPMCRIHL*KRRQTA Trigger: TGCTGTTTGTCTTCTCTTTCAGAGATGTATTCTACA...CATTGGAAACCCTTGCCATATATCAGGACAGTCATGGCCAAACCCACTAGTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCATCAGGATGCTTTGATGTTGCCACATCATCACTGAGTGAAGATCAAAGGCCTGTTGTGAGAGTCTaGATACAAAAGCAAGTATCT | + |
|
Preference number: 2 (lower is better) Translates to: SSSGCFDVATSSLSEDQRPVVRV*IQKQVS Trigger: AGATACTTGCTTTTGTATTCAGACTCTCACAACAGG...CCTTTGATCTTCACTCAGTGATGATGTGGCAACATCAAAGCATCCTGATGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGCTCATCAGGATGCTTTGATGTTGCCACATCATCACTGAGTGAAGATCAAATGGCATTAGGCCTTTaGCATATAAAGATGGTATGG | + |
|
Preference number: 2 (lower is better) Translates to: QSSSGCFDVATSSLSEDQMALGL*HIKMVW Trigger: CCATACCATCTTTATATGCCAAAGGCCTAATGCCAT...TTGATCTTCACTCAGTGATGATGTGGCAACATCAAAGCATCCTGATGAGCTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR CAA 90 bp | AAGTTACACAGAACATCCAGTCCAGACCTCTCAGTTTGGATTTCTTaGATGGTTCCAAAATCCAAGAAGTGTAGAGGAACCTTCACACTT | + |
|
Preference number: 2 (lower is better) Translates to: KLHRTSSPDLSVWIS*MVPKSKKCRGTFTL Trigger: AAGTGTGAAGGTTCCTCTACACTTCTTGGATTTTGGAACCATCAAAGAAATCCAAACTGAGAGGTCTGGACTGGATGTTCTGTGTAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR CAA 90 bp | AGGTCAGGATGGAATTCTTTGTGTAGCAGAGACAATGTGTCTGCTTaGAAAATGTTTGGCTGTGACTTTCTTGACACATGCTTAGACTCA | + |
|
Preference number: 2 (lower is better) Translates to: RSGWNSLCSRDNVSA*KMFGCDFLDTCLDS Trigger: TGAGTCTAAGCATGTGTCAAGAAAGTCACAGCCAAACATTTTCAAAGCAGACACATTGTCTCTGCTACACAAAGAATTCCATCCTGACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR CAA 90 bp | CCTTTCCCAGAAGAGATTAATTTGCTCAGGTCAGGATGGAATTCTTaGTGTAGCAGAGACAATGTGTCTGCTTTGAAAATGTTTGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: PFPEEINLLRSGWNS*CSRDNVSALKMFGC Trigger: ACAGCCAAACATTTTCAAAGCAGACACATTGTCTCTGCTACACAAAGAATTCCATCCTGACCTGAGCAAATTAATCTCTTCTGGGAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR CAA 90 bp | TGGACCTCTTATTCCCCAAATTATCCTTTCCCAGAAGAGATTAATTaGCTCAGGTCAGGATGGAATTCTTTGTGTAGCAGAGACAATGTG | + |
|
Preference number: 2 (lower is better) Translates to: WTSYSPNYPFPEEIN*LRSGWNSLCSRDNV Trigger: CACATTGTCTCTGCTACACAAAGAATTCCATCCTGACCTGAGCAAATTAATCTCTTCTGGGAAAGGATAATTTGGGGAATAAGAGGTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR CCA 90 bp | GTAACTAGTGGGTTTGGCCATGACTGTCCTGATATATGGCAAGGGTTTCCAATGTTACAAACACACATGTaGTACAGAAATGTTTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VTSGFGHDCPDIWQGFPMLQTHM*YRNVCV Trigger: CACACAAACATTTCTGTACCACATGTGTGTTTGTAA...CATTGGAAACCCTTGCCATATATCAGGACAGTCATGGCCAAACCCACTAGTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR CAA 90 bp | AGCAAGAATATATATGCCCAAGGTGATGCCATGTGTGTGGAGCTGTaGGGCAGGGAATCTTTCTTCTTTGTGAATACAGTTTATATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SKNIYAQGDAMCVEL*GRESFFFVNTVYIS Trigger: AGAAATATAAACTGTATTCACAAAGAAGAAAGATTCCCTGCCCAACAGCTCCACACACATGGCATCACCTTGGGCATATATATTCTTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAGATGTAGGCAACCATCTACTCTCTTCCAGATGTGAACTGTCTAAATCCTACAGTAAGTTGATGACGTaGTATACCCAGAAAGTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: RDVGNHLLSSRCELSKSYSKLMT*YTQKVV Trigger: TACAACTTTCTGGGTATAGCACGTCATCAACTTACT...GTAGGATTTAGACAGTTCACATCTGGAAGAGAGTAGATGGTTGCCTACATCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR CCA 90 bp | AATTCTTTCTTACATTTGTACATGTTGGCTGACAAGAGTAAATGCAGGCAGTTTAGTCATGTCTTCAACTaGCTCCTCTTTCTTTCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: NSFLHLYMLADKSKCRQFSHVFN*LLFLSN Trigger: ATTGGAAAGAAAGAGGAGCCAGTTGAAGACATGACT...AAACTGCCTGCATTTACTCTTGTCAGCCAACATGTACAAATGTAAGAAAGAATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR TCA 90 bp | AATTCTTTCTTACATTTGTACATGTTGGCTGACAAGAGTAAATGCAGGCAGTTTAGCCACAAGAGTAAATaGACTTTACATAGAGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: NSFLHLYMLADKSKCRQFSHKSK*TLHREL Trigger: GAGTTCTCTATGTAAAGTTCATTTACTCTTGTGGCT...AAACTGCCTGCATTTACTCTTGTCAGCCAACATGTACAAATGTAAGAAAGAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR TCA 90 bp | AATTCTTTCTTACATTTGTACATGTTGGCTGACAAGAGTAAATGCAGGCAGTTTGGGATTGTTCTCTCATaGATATGGGTTTTCTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: NSFLHLYMLADKSKCRQFGIVLS*IWVFFF Trigger: AAAGAAGAAAACCCATATTCATGAGAGAACAATCCC...AAACTGCCTGCATTTACTCTTGTCAGCCAACATGTACAAATGTAAGAAAGAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR GCA 90 bp | AATTCTTTCTTACATTTGTACATGTTGGCTGACAAGAGTAAATGCAGGCAGTTTACATCTCTTTGGCTTTaGCTGCTAGTATATTTATGG | + |
|
Preference number: 2 (lower is better) Translates to: NSFLHLYMLADKSKCRQFTSLWL*LLVYLW Trigger: CCATAAATATACTAGCAGGCAAAGCCAAAGAGATGT...AAACTGCCTGCATTTACTCTTGTCAGCCAACATGTACAAATGTAAGAAAGAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR CCA 72 bp | TTTCTTAACTCCCGCGGTGGTGCTGTCCGAATGAAGTaGGCGTGTACCTTGGTGGTTATATCTGTCCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: FLNSRGGAVRMK*ACTLVVISVPQ Trigger: TTGGGGGACAGATATAACCACCAAGGTACACGCCCACTTCATTCGGACAGCACCACCGCGGGAGTTAAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAAGAGGCACACCCAAAGCCGGTACACCTCAACCACACAGCAAGGCGATGAGTTAAACTCTCACCACTaGAGAGGCTGTGGAAATAGG | + |
|
Preference number: 3 (lower is better) Translates to: EKRHTQSRYTSTTQQGDELNSHH*RGCGNR Trigger: CCTATTTCCACAGCCTCTCAAGTGGTGAGAGTTTAA...CTCATCGCCTTGCTGTGTGGTTGAGGTGTACCGGCTTTGGGTGTGCCTCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR TCA 72 bp | CATGCCACAGGGGTGATGATGAAGCTCCCTCTAAGATaGACTGTGGCAGGTGAAACGTGTGTGTTGGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HATGVMMKLPLR*TVAGETCVLES Trigger: GCTTTCCAACACACACGTTTCACCTGCCACAGTTCATCTTAGAGGGAGCTTCATCATCACCCCTGTGGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR GCA 72 bp | ACCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTaGCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTG | + |
|
Preference number: 3 (lower is better) Translates to: TLVVISVPQVSC*HLACRAPWSYL Trigger: CAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| 3UTR CCA 72 bp | CAAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTaGTCCTATCTGGATTTCCTCCTCAGATGTGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QVSCCHLACRAP*SYLDFLLRCGS Trigger: GGAACCACATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| 3UTR TCA 72 bp | CAATTTTTCTTAACTCCCGCGGTGGTGCTGTCCGAATaGAGTGGGCGTGTACCTTGGTGGTTATATCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QFFLTPAVVLSE*SGRVPWWLYLS Trigger: GGACAGATATAACCACCAAGGTACACGCCCACTTCATTCGGACAGCACCACCGCGGGAGTTAAGAAAAATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| 3UTR GCA 72 bp | CAAGGCATTCCTGAGAAGCTCTGTAGAAGTCAGACATaGCACAGGGGTGATGATGAAGCTCCCTCTAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: QGIPEKLCRSQT*HRGDDEAPSKM Trigger: CATCTTAGAGGGAGCTTCATCATCACCCCTGTGGCATGTCTGACTTCTACAGAGCTTCTCAGGAATGCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR GCA 72 bp | ATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTaGCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTG | + |
|
Preference number: 3 (lower is better) Translates to: ILVVISVPQVSC*HLACRAPWSYL Trigger: CAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| 3UTR TCA 72 bp | TCGGGTGACTGTCAAAGTGGTCAGTGTAAGCAGAGGTaGCACAATCGGATATCTTGGGGTAGAGAAACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SGDCQSGQCKQR*HNRISWGRETG Trigger: TCCTGTTTCTCTACCCCAAGATATCCGATTGTGTCACCTCTGCTTACACTGACCACTTTGACAGTCACCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR CAA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCATTTCCTGTTGCCATCTaGCCTGTAGAGCGCCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPFPVAI*PVERLG Trigger: ACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAA...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTAAATGCAGGCAGTTTACAAACCAAGGGGACGGCAGGTAAATTGGGTGAGGCCACTTACATCTCTTaGGCTTTGCCTGCTAGTATA | + |
|
Preference number: 3 (lower is better) Translates to: RVNAGSLQTKGTAGKLGEATYIS*ALPASI Trigger: TATACTAGCAGGCAAAGCCAAAGAGATGTAAGTGGC...CTCACCCAATTTACCTGCCGTCCCCTTGGTTTGTAAACTGCCTGCATTTACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCATTTCCTGTTGCCATCTaGCCTGTAGAGCGCCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: FRFSTSLIPMPILVQQVSFPVAI*PVERLG Trigger: ACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAA...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| 3UTR TCA 72 bp | GATGATGAAGCTCCCTCTAAGATGAACTGTGGCAGGTaGAACGTGTGTGTTGGAAAGCAGCAATCTAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: DDEAPSKMNCGR*NVCVGKQQSNN Trigger: GTTGTTAGATTGCTGCTTTCCAACACACACGTTTCACCTGCCACAGTTCATCTTAGAGGGAGCTTCATCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR TCA 72 bp | AGGGCATCAATACCCATAGTCGGGACTAGGAACAAGTaGAAGAAAGAATGCGAGTCATGTCTTCAACTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RASIPIVGTRNK*KKECESCLQLA Trigger: AGCCAGTTGAAGACATGACTCGCATTCTTTCTTTCACTTGTTCCTAGTCCCGACTATGGGTATTGATGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTTTCCTGTTGCCATCTaGCCTGTAGAGCGCCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SIHLDSNKKRFLGNCKILFPVAI*PVERLG Trigger: ACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAA...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCACTATCTTTCCTGTTGCCATCTaGCCTGTAGAGCGCCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: RCFLFNYVSGAAKFSFTIFPVAI*PVERLG Trigger: ACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAA...GATAGTGAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGAAGTGGGCGTGTACCTaGGTGGTTATATCTGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SIHLDSNKKRFLGNCKILKWACT*VVISVP Trigger: GGGGACAGATATAACCACCAAGGTACACGCCCACTT...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| 3UTR TCA 72 bp | ACCACAAAGTTTACAAAGAAGGGCAATGAGCGCCAGTaGGTTTCAATGTTTTCCCCAAAGTCACACAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: TTKFTKKGNERQ*VSMFSPKSHSH Trigger: ATGGCTGTGTGACTTTGGGGAAAACATTGAAACTCACTGGCGCTCATTGCCCTTCTTTGTAAACTTTGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR TCA 72 bp | ATCTGGTCTCACCACAAAGTTTACAAAGAAGGGCAATaGGCGCCAGTGAGTTTCAATGTTTTCCCCAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: IWSHHKVYKEGQ*APVSFNVFPKV Trigger: GACTTTGGGGAAAACATTGAAACTCACTGGCGCTCATTGCCCTTCTTTGTAAACTTTGTGGTGAGACCAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR TCA 72 bp | CACCACTGGCCTTGGACTTACACCAGCACATATCTCTaGATAGATTACTTTTCCAGAGCAATTACTCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HHWPWTYTSTYL*IDYFSRAITQL Trigger: GAGCTGAGTAATTGCTCTGGAAAAGTAATCTATTCAGAGATATGTGCTGGTGTAAGTCCAAGGCCAGTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR TCA 72 bp | GAACATCCAGTCCAGACCTCTCAGTTTGGATTTCTTTaGTGGTTCCAAAATCCAAGAAGTGTAGAGGAACCT | + |
|
Preference number: 3 (lower is better) Translates to: EHPVQTSQFGFL*WFQNPRSVEEP Trigger: AGGTTCCTCTACACTTCTTGGATTTTGGAACCATCAAAGAAATCCAAACTGAGAGGTCTGGACTGGATGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR CCA 72 bp | ATACTGAAGACTTGCAGGTCGCCACTTACATCTCTTTaGCTTTGCCTGCTAGTATATTTATGGAGTGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: ILKTCRSPLTSL*LCLLVYLWSAS Trigger: AGATGCACTCCATAAATATACTAGCAGGCAAAGCCAAAGAGATGTAAGTGGCGACCTGCAAGTCTTCAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCATCAGGATGCTTTGATGTTGCCACATCATCACTGAGTGAAGATCAAAGGTTTCACCATGTCTATTaGTCACAAATGTCGAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSSGCFDVATSSLSEDQRFHHVY*SQMSNS Trigger: GGAGTTCGACATTTGTGACAAATAGACATGGTGAAA...CCTTTGATCTTCACTCAGTGATGATGTGGCAACATCAAAGCATCCTGATGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAACAAACAAAACCCAGGATGGTCCCAAGGAGTATGCACAACTAACGTTTTATAATGGTCTTGAGATCTaGGTGGTTATATCTGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: QTNKTQDGPKEYAQLTFYNGLEI*VVISVP Trigger: GGGGACAGATATAACCACCAAGATCTCAAGACCATT...ATAAAACGTTAGTTGTGCATACTCCTTGGGACCATCCTGGGTTTTGTTTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| 3UTR TCA 72 bp | ATGACATTTGAATGGGAGATCAGCATTCTGGAACCTTaGGATGATCTGGTCTCACCACAAAGTTTACAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: MTFEWEISILEP*DDLVSPQSLQR Trigger: TCTTTGTAAACTTTGTGGTGAGACCAGATCATCTCAAGGTTCCAGAATGCTGATCTCCCATTCAAATGTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR TCA 72 bp | TCAATTTCTCCTTTACATTTAGATTCTCCACTTCCCTaGTACCAATGCCAATACTGGTCCAACAAGTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SISPLHLDSPLP*YQCQYWSNKFQ Trigger: CTGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAATGTAAAGGAGAAATTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| 3UTR TCA 72 bp | TCTCTTCCAGATGTGAACTGTCTAAATCCTACCCTCTaGGTGTTTCCCTTTCAATCATTTTTAGGAGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: SLPDVNCLNPTL*VFPFQSFLGEM Trigger: CATTTCTCCTAAAAATGATTGAAAGGGAAACACTCAGAGGGTAGGATTTAGACAGTTCACATCTGGAAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR CAA 90 bp | AATTCTTTCTTACATTTGTACATGTTGGCTGACAAGAGTAAATGCAGGCAGTTTAAGCTGTATATGACATaGAGTAACTATGTGGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: NSFLHLYMLADKSKCRQFKLYMT*SNYVAG Trigger: GCCTGCCACATAGTTACTCAATGTCATATACAGCTT...AAACTGCCTGCATTTACTCTTGTCAGCCAACATGTACAAATGTAAGAAAGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR CAA 90 bp | AATTCTTTCTTACATTTGTACATGTTGGCTGACAAGAGTAAATGCAGGCAGTTTATGTGTATGAGTAAGTaGATGACGTGCTATACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: NSFLHLYMLADKSKCRQFMCMSK*MTCYTQ Trigger: CTGGGTATAGCACGTCATCAACTTACTCATACACAT...AAACTGCCTGCATTTACTCTTGTCAGCCAACATGTACAAATGTAAGAAAGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR-3UTR CAA 90 bp | AATTCTTTCTTACATTTGTACATGTTGGCTGACAAGAGTAAATGCAGGCAGTTTTCATTAGGAAAGGAGTaGCATAGAAGATACAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: NSFLHLYMLADKSKCRQFSLGKE*HRRYSK Trigger: CTTGCTGTATCTTCTATGCAACTCCTTTCCTAATGA...AAACTGCCTGCATTTACTCTTGTCAGCCAACATGTACAAATGTAAGAAAGAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR CCA 72 bp | ATGGCAAGGGTTTCCAATGTAGCATTTTGGTACTCTTaGGATAGATACCTTCATATAAAGTTTAGTATACTG | + |
|
Preference number: 3 (lower is better) Translates to: MARVSNVAFWYS*DRYLHIKFSIL Trigger: CAGTATACTAAACTTTATATGAAGGTATCTATCCCAAGAGTACCAAAATGCTACATTGGAAACCCTTGCCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR TCA 72 bp | CAAGGAGAAAGAGCAGACTGCTTAGTGAAAATTATTTaGTGTATGGTATGTTCTAGTTTGGAAACTGTCATT | + |
|
Preference number: 3 (lower is better) Translates to: QGERADCLVKII*CMVCSSLETVI Trigger: AATGACAGTTTCCAAACTAGAACATACCATACATCAAATAATTTTCACTAAGCAGTCTGCTCTTTCTCCTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR CCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCCGGAGCCGGTGCCACTaGCGCTTAGCAGGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISRSRCH*RLAGPG Trigger: CCCTGGCCCTGCTAAGCGCCAGTGGCACCGGCTCCG...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | GAAAAGAGGCACACCCAAAGCCGGTACACCTCAACCACACAGCAAGGCGATGAGTCATGGCCTCTTGTTTaGGGGGCATCCAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EKRHTQSRYTSTTQQGDESWPLV*GASRLL Trigger: CAGCAGCCTGGATGCCCCTCAAACAAGAGGCCATGA...CTCATCGCCTTGCTGTGTGGTTGAGGTGTACCGGCTTTGGGTGTGCCTCTTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTAGAAGGCCCCACCATTaGGTGGGGCTGGGTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLRRPHH*VGLGWC Trigger: GCACCAACCCAGCCCCACTCAATGGTGGGGCCTTCT...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCAGAGCGGCGGAGCCGGTaGCACTGGCGCTTAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPERRSR*HWRLAG Trigger: CCCTGCTAAGCGCCAGTGGCACCGGCTCCGCCGCTC...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| CDS-3UTR CCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCACGGAGCCGGTGCCACTaGCGCTTAGCAGGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPRSRCH*RLAGPG Trigger: CCCTGGCCCTGCTAAGCGCCAGTGGCACCGGCTCCG...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATTCCCTCCTGCGCCAGTaGGTGCATTCAGTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDSLLRQ*VHSVPQ Trigger: CTGTGGGACTGAATGCACCCACTGGCGCAGGAGGGA...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS-3UTR CCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATCCCGTTCTTGGGGGCTaGTGCTGTACACTCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDPVLGG*CCTLPP Trigger: AGGAGGGAGTGTACAGCACCAGCCCCCAAGAACGGG...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTCTTCGTAGTGCCTGCTaGGCTCCAGGCCACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLLRSAC*APGHTL Trigger: CAGTGTGTGGCCTGGAGCTCAGCAGGCACTACGAAG...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCCTTCGTAGTGCCTGCTaGGCTCCAGGCCACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISLRSAC*APGHTL Trigger: CAGTGTGTGGCCTGGAGCTCAGCAGGCACTACGAAG...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | AGAGTAAATGCAGGCAGTTTACAAACCAAGGGGACGGCAGGTAAATTGGGTGAGAGAAGGCCCCACCATTaGGTGGGGCTGGGTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVNAGSLQTKGTAGKLGERRPHH*VGLGWC Trigger: GCACCAACCCAGCCCCACTCAATGGTGGGGCCTTCT...CTCACCCAATTTACCTGCCGTCCCCTTGGTTTGTAAACTGCCTGCATTTACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR GCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATCTGTACACTCCCTCCTaGGCCAGTGGGTGCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDLYTPS*ASGCIQ Trigger: CTGAATGCACCCACTGGCGCAGGAGGGAGTGTACAG...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCGAGGGGCATCCAGGCTaGTGCATAGCTTCTGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISEGHPG*CIASAG Trigger: TCCGGCAGAAGCTATGCAGCAGCCTGGATGCCCCTC...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS-3UTR CCA 90 bp | CTAGTTCAGACACTGTTCCCACAACCATACTGCCTCCCAGATAGCCACAAGAGTTCCCTCCTGCGCCAGTaGGTGCATTCAGTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LVQTLFPQPYCLPDSHKSSLLRQ*VHSVPQ Trigger: CTGTGGGACTGAATGCACCCACTGGCGCAGGAGGGA...ACTCTTGTGGCTATCTGGGAGGCAGTATGGTTGTGGGAACAGTGTCTGAACTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR CCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATCAGCTGCTTTGGTGGTaGACTGCCCAACCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDQLLWW*TAQPGH Trigger: ATGCCCTGGTTGGGCAGTCCACCACCAAAGCAGCTG...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCATGGCCTCTTGTTTaGGGGGCATCCAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISSWPLV*GASRLL Trigger: CAGCAGCCTGGATGCCCCTCAAACAAGAGGCCATGA...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCAGAGCGGCGGAGCCGGTaGCACTGGCGCTTAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSERRSR*HWRLAG Trigger: CCCTGCTAAGCGCCAGTGGCACCGGCTCCGCCGCTC...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| CDS-3UTR GCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATGTGGGGCTGGGTTGGTaGAGGTTCTTGTGCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDVGLGW*RFLCVS Trigger: AGAAACGCACAAGAACCTGCACCAACCCAGCCCCAC...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATTCTTCCAGTCCTCGGTaGTGGGGTCTGCACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDSSSPR*WGLHSD Trigger: ATCACTGTGCAGACCCCAGCACCGAGGACTGGAAGA...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTGGACGGCTGCCAGCATaGTCAGGTTTCCATCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLGRLPA*SGFHLG Trigger: TCCCAGATGGAAACCTGAGCATGCTGGCAGCCGTCC...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | CTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGCCCCCGTTCTTGGGGGCTaGTGCTGTACACTCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LEILVVISVPQVSCCHLAPVLGG*CCTLPP Trigger: AGGAGGGAGTGTACAGCACCAGCCCCCAAGAACGGG...GGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
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| CDS-3UTR CCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTCAGCTGCTTTGGTGGTaGACTGCCCAACCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLQLLWW*TAQPGH Trigger: ATGCCCTGGTTGGGCAGTCCACCACCAAAGCAGCTG...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS-3UTR TCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTGGTCATCCTGAGGAGTaGCAGCACCTGAGCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLGHPEE*QHLSCC Trigger: ACAACAGCTCAGGTGCTGTCACTCCTCAGGATGACC...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS-3UTR TCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTCTGGGGTCTGCACAGTaGTGCAGAGTGAGGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLLGSAQ*CRVRMT Trigger: TGTCATCCTCACTCTGCATCACTGTGCAGACCCCAG...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS-3UTR TCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATGCCAGTAGGTTCCTCTaGCACAGTACAGTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDASRFL*HSTVEL Trigger: CAGCTCAACTGTACTGTGTCAGAGGAACCTACTGGC...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS-3UTR GCA 90 bp | GGTCTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGTTCTTGGGGGCTGGTaGTGTACACTCCCTCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLEILVVISVPQVSCCHLVLGGW*CTLPPA Trigger: CGCAGGAGGGAGTGTACAGCACCAGCCCCCAAGAAC...AAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
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| CDS-3UTR GCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATTCCTCCCATTGTCCCTaGACTGCCTGGTTTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDSSHCP*TAWFLS Trigger: GCTCAAAAACCAGGCAGTGCAGGGACAATGGGAGGA...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS-3UTR GCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATCTGCTGCATAGCTTCTaGCGGATAGGGAGAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDLLHSF*RIGRGM Trigger: CATTCCTCTCCCTATCCGGCAGAAGCTATGCAGCAG...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS-3UTR GCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTTTCTTCCAGGACGGCTaGCAGCATGCTCAGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLFFQDG*QHAQVS Trigger: GGAAACCTGAGCATGCTGGCAGCCGTCCTGGAAGAA...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS-3UTR CCA 90 bp | AGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCACTATCCGGAGCCGGTGCCACTaGCGCTTAGCAGGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RCFLFNYVSGAAKFSFTIRSRCH*RLAGPG Trigger: CCCTGGCCCTGCTAAGCGCCAGTGGCACCGGCTCCG...GATAGTGAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| CDS-3UTR CCA 90 bp | ATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACCTGAATACTTCTAGCCGGAGCCGGTGCCACTaGCGCTTAGCAGGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IRQNDSQWNPFSNLNTSSRSRCH*RLAGPG Trigger: CCCTGGCCCTGCTAAGCGCCAGTGGCACCGGCTCCG...GCTAGAAGTATTCAGGTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| CDS-3UTR CCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCAGGTGGCCGACACTaGAGTAAGACTTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISSGGRH*SKTSCS Trigger: GGAGCAGGAAGTCTTACTCCAGTGTCGGCCACCTGA...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTTCAGGTGGCCGACACTaGAGTAAGACTTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLSGGRH*SKTSCS Trigger: GGAGCAGGAAGTCTTACTCCAGTGTCGGCCACCTGA...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATGTGCAGTTCTTGGATTaGAGGACCAGGCCATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDVQFLD*RTRPSQ Trigger: CTGTGATGGCCTGGTCCTCCAATCCAAGAACTGCAC...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | AGATGGCACCAGGCACAAATAATTTGTTTTTCTACCCACCCACAGCAAGCAAGGCTCTCCCCTGAGGAATaGCCCCAGCGGGAATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RWHQAQIICFSTHPQQARLSPEE*PQRESA Trigger: TGCTGATTCCCGCTGGGGCCATTCCTCAGGGGAGAG...CCTTGCTTGCTGTGGGTGGGTAGAAAAACAAATTATTTGTGCCTGGTGCCATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR TCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATCTGACACAGTACAGTTaGGCTGGAAGATCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDLTQYS*AGRSAL Trigger: AAGGGCAGATCTTCCAGCTCAACTGTACTGTGTCAG...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTGCCAGTAGGTTCCTCTaGCACAGTACAGTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLASRFL*HSTVEL Trigger: CAGCTCAACTGTACTGTGTCAGAGGAACCTACTGGC...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATTGGTGCAGGTTCTTGTaGGTTTCTGATATCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDWCRFL*VSDILA Trigger: GGCGAGGATATCAGAAACGCACAAGAACCTGCACCA...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATCCTTCTCCTTCAACCTaGCGCACACAGAGTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDPSPST*RTQSLQ Trigger: TTGCAAACTCTGTGTGCGGCAGGTTGAAGGAGAAGG...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | AGATGGCACCAGGCACAAATAATTTGTTTTTCTACCCACCCACAGCAAGCAAGGGGACGGCTGCCAGCATaGTCAGGTTTCCATCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RWHQAQIICFSTHPQQARGRLPA*SGFHLG Trigger: TCCCAGATGGAAACCTGAGCATGCTGGCAGCCGTCC...CCTTGCTTGCTGTGGGTGGGTAGAAAAACAAATTATTTGTGCCTGGTGCCATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTGTGCAGTTCTTGGATTaGAGGACCAGGCCATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLVQFLD*RTRPSQ Trigger: CTGTGATGGCCTGGTCCTCCAATCCAAGAACTGCAC...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATTTCTCTAGCAAGGACTaGGTCATCTGGGGTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDFSSKD*VIWGDS Trigger: ACTGTCACCCCAGATGACCCAGTCCTTGCTAGAGAA...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTCAGCTGCTTTGGTGGTaGACTGCCCAACCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLEILVVISVPQVSCCHLQLLWW*TAQPGH Trigger: ATGCCCTGGTTGGGCAGTCCACCACCAAAGCAGCTG...AAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | GTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAGAAGGCCCCACCATTaGGTGGGGCTGGGTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VYQEVTESEGIRQNDSQWRRPHH*VGLGWC Trigger: GCACCAACCCAGCCCCACTCAATGGTGGGGCCTTCT...CCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATGGGTCTGTGCTCAGTTaGAATGGGGTAAATGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDGSVLS*NGVNES Trigger: GGATTCATTTACCCCATTTCAACTGAGCACAGACCC...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATGTGCTGAGGAGTCAATaGTGTCAGACTCAAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDVLRSQ*CQTQSH Trigger: GTGACTTTGAGTCTGACATCATTGACTCCTCAGCAC...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTTGATGTTCACAGGCTaGAAGCCGCCATTGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISLMFTG*KPPLSA Trigger: AGCACTCAATGGCGGCTTTCAGCCTGTGAACATCAA...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | GAAAAGAGGCACACCCAAAGCCGGTACACCTCAACCACACAGCAAGGCGATGAGATGCTGCCTTTAAAATaGAGAGCCTTGGGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EKRHTQSRYTSTTQQGDEMLPLK*RALGSS Trigger: AGAAGAACCCAAGGCTCTTCATTTTAAAGGCAGCAT...CTCATCGCCTTGCTGTGTGGTTGAGGTGTACCGGCTTTGGGTGTGCCTCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR GCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATAACAGTTCCTCCACCTaGTGGCGTGAAATCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDNSSST*WREISM Trigger: CATTGAGATTTCACGCCAGCAGGTGGAGGAACTGTT...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTTTTCCCAAGGGTTCCTaGTCGAATGTCTTCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLFPKGS*SNVFRR Trigger: TCTGCGGAAGACATTCGAGCAGGAACCCTTGGGAAA...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCACTGTACACTCCCTCCTaGGCCAGTGGGTGCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPLYTPS*ASGCIQ Trigger: CTGAATGCACCCACTGGCGCAGGAGGGAGTGTACAG...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTCATCAGGATGCTTTGATGTTGCCACATCATCACTGAGTGAAGATCAACTGTACACTCCCTCCTaGGCCAGTGGGTGCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSSSGCFDVATSSLSEDQLYTPS*ASGCIQ Trigger: CTGAATGCACCCACTGGCGCAGGAGGGAGTGTACAG...TTGATCTTCACTCAGTGATGATGTGGCAACATCAAAGCATCCTGATGAGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR GCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCAGGTACCAAATGCTGTaGAGGATGGGTCAGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISRYQML*RMGQSV Trigger: GACAGACTGACCCATCCTGCACAGCATTTGGTACCT...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | GTAACTAGTGGGTTTGGCCATGACTGTCCTGATATATGGCAAGGGTTTCCAATGTCTTCCAGTCCTCGGTaGTGGGGTCTGCACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VTSGFGHDCPDIWQGFPMSSSPR*WGLHSD Trigger: ATCACTGTGCAGACCCCAGCACCGAGGACTGGAAGA...CATTGGAAACCCTTGCCATATATCAGGACAGTCATGGCCAAACCCACTAGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTCCATTGTCCCTGCACTaGCTGGTTTTTGAGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLPLSLH*LVFELD Trigger: ATCCAGCTCAAAAACCAGGCAGTGCAGGGACAATGG...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTCCTTCTCCTTCAACCTaGCGCACACAGAGTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLPSPST*RTQSLQ Trigger: TTGCAAACTCTGTGTGCGGCAGGTTGAAGGAGAAGG...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | CTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGCCCTGCTGCATAGCTTCTaGCGGATAGGGAGAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LEILVVISVPQVSCCHLALLHSF*RIGRGM Trigger: CATTCCTCTCCCTATCCGGCAGAAGCTATGCAGCAG...GGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCCTCAGGTGGGTCAGATaGAAAGGTTTCTGGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISLRWVR*KGFWEF Trigger: GAACTCCCAGAAACCTTTCCATCTGACCCACCTGAG...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCTGGGTGGCAGGGCTaGCTTTACAATACAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISSGWQG*LYNTGS Trigger: TGAACCTGTATTGTAAAGCCAGCCCTGCCACCCAGA...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCATTCTACCTCAGCCACTaGGATCCCTTCAGGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPFYLSH*DPFRWP Trigger: CGGCCACCTGAAGGGATCCCAGTGGCTGAGGTAGAA...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTCATCAGTGCAGTTCTTaGATTGGAGGACCAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLHQCSS*IGGPGH Trigger: ATGGCCTGGTCCTCCAATCCAAGAACTGCACTGATG...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTAAGGACTGGGTCATCTaGGGTGACAGTTTGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLKDWVI*GDSLDE Trigger: CTCATCCAAACTGTCACCCCAGATGACCCAGTCCTT...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCAAGGACTGGGTCATCTaGGGTGACAGTTTGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISKDWVI*GDSLDE Trigger: CTCATCCAAACTGTCACCCCAGATGACCCAGTCCTT...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTTCTCTAGCAAGGACTaGGTCATCTGGGGTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISFSSKD*VIWGDS Trigger: ACTGTCACCCCAGATGACCCAGTCCTTGCTAGAGAA...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTTTCTCTAGCAAGGACTaGGTCATCTGGGGTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLFSSKD*VIWGDS Trigger: ACTGTCACCCCAGATGACCCAGTCCTTGCTAGAGAA...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTGTCCCTGCACTGCCTaGTTTTTGAGCTGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISCPCTA*FLSWIF Trigger: GAAGATCCAGCTCAAAAACCAGGCAGTGCAGGGACA...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTTGTCCCTGCACTGCCTaGTTTTTGAGCTGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLCPCTA*FLSWIF Trigger: GAAGATCCAGCTCAAAAACCAGGCAGTGCAGGGACA...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTTTCTCTGTGAGGATATaGCAAGCCTCTGCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLFSVRI*QASASS Trigger: GCTGGATGCAGAGGCTTGCCATATCCTCACAGAGAA...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCAGGTTGAGTTTATaGGCCAGCATCCTCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISSRLSL*ASILQS Trigger: TGACTGGAGGATGCTGGCCCATAAACTCAACCTGGA...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| 3UTR CAA 72 bp | TGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTaGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WLYLSPKFPVAI*PVERLGPIWIS Trigger: GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| 3UTR CAA 72 bp | CTAAGTCCACCCACACTGTGTTTCTGTAATCCTCCTTaGCCACCACTGGCCTTGGACTTACACCAGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: LSPPTLCFCNPP*PPLALDLHQHI Trigger: TATGTGCTGGTGTAAGTCCAAGGCCAGTGGTGGCAAAGGAGGATTACAGAAACACAGTGTGGGTGGACTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR TCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGAGAAGGCCCCACCATTaGGTGGGGCTGGGTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILRRPHH*VGLGWC Trigger: GCACCAACCCAGCCCCACTCAATGGTGGGGCCTTCT...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTTTGAAATGGGGTAAATaGATCCCTGCATGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLLKWGK*IPACTA Trigger: GGCTGTGCATGCAGGGATTCATTTACCCCATTTCAA...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCGGGTCTGTGCTCAGTTaGAATGGGGTAAATGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISGSVLS*NGVNES Trigger: GGATTCATTTACCCCATTTCAACTGAGCACAGACCC...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCGAGAGCCACATCATCTaGGTCAGGAGCAGAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISESHII*VRSRRK Trigger: TTTTCTTCTGCTCCTGACTCAGATGATGTGGCTCTC...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | AGATGGCACCAGGCACAAATAATTTGTTTTTCTACCCACCCACAGCAAGCAAGGGCACTGCCTGGTTTTTaGGCTGGATCTTCCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RWHQAQIICFSTHPQQARALPGF*AGSSSP Trigger: AGGACTGGAAGATCCAGCTCAAAAACCAGGCAGTGC...CCTTGCTTGCTGTGGGTGGGTAGAAAAACAAATTATTTGTGCCTGGTGCCATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR TCA 90 bp | GGTCTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGCACTGCCTGGTTTTTaGGCTGGATCTTCCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLEILVVISVPQVSCCHLALPGF*AGSSSP Trigger: AGGACTGGAAGATCCAGCTCAAAAACCAGGCAGTGC...AAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGCCCTGACACAGTACAGTTaGGCTGGAAGATCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEILVVISVPQVSCCHLALTQYS*AGRSAL Trigger: AAGGGCAGATCTTCCAGCTCAACTGTACTGTGTCAG...GGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | TTACAAAGAAGGGCAATGAGCGCCAGTGAGTTTCAATGTTTTCCCCAAAGTCACGTGGGGCTGGGTTGGTaGAGGTTCTTGTGCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQRRAMSASEFQCFPQSHVGLGW*RFLCVS Trigger: AGAAACGCACAAGAACCTGCACCAACCCAGCCCCAC...GTGACTTTGGGGAAAACATTGAAACTCACTGGCGCTCATTGCCCTTCTTTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR GCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCAGTGGGGCTGGGTTGGTaGAGGTTCTTGTGCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPVGLGW*RFLCVS Trigger: AGAAACGCACAAGAACCTGCACCAACCCAGCCCCAC...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCAGTTCTTGGGGGCTGGTaGTGTACACTCCCTCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSVLGGW*CTLPPA Trigger: CGCAGGAGGGAGTGTACAGCACCAGCCCCCAAGAAC...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCATCTTCCAGTCCTCGGTaGTGGGGTCTGCACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPSSSPR*WGLHSD Trigger: ATCACTGTGCAGACCCCAGCACCGAGGACTGGAAGA...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATGATATGGCAAGCCTCTaGATCCAGCTGAATGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDDMASL*IQLNVT Trigger: TGTTACATTCAGCTGGATGCAGAGGCTTGCCATATC...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTAGCTGTCCTCCCATTTaGCTCTCCAGTTGTAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLSCPPI*LSSCRT Trigger: AGTTCTACAACTGGAGAGGCAAATGGGAGGACAGCT...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | GTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCGAGGGGCATCCAGGCTaGTGCATAGCTTCTGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTESEGIRQNDSQWNPFSEGHPG*CIASAG Trigger: TCCGGCAGAAGCTATGCAGCAGCCTGGATGCCCCTC...GCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCAGAGGGGCATCCAGGCTaGTGCATAGCTTCTGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSEGHPG*CIASAG Trigger: TCCGGCAGAAGCTATGCAGCAGCCTGGATGCCCCTC...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCATTCTTCCAGGACGGCTaGCAGCATGCTCAGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPFFQDG*QHAQVS Trigger: GGAAACCTGAGCATGCTGGCAGCCGTCCTGGAAGAA...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCAATACTGTCCTTCTaGTGCCAAGGACACCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISSILSF*CQGHHC Trigger: ACAGTGGTGTCCTTGGCAGCAGAAGGACAGTATTGA...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | GTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCTCCCTCCTGCGCCAGTaGGTGCATTCAGTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VTESEGIRQNDSQWNPFSSLLRQ*VHSVPQ Trigger: CTGTGGGACTGAATGCACCCACTGGCGCAGGAGGGA...GCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGTGCAGTTCTTGGATTaGAGGACCAGGCCATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GLEILVVISVPQVSCCHLVQFLD*RTRPSQ Trigger: CTGTGATGGCCTGGTCCTCCAATCCAAGAACTGCAC...AAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | GTTAGCGTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCTCTCCCCTGAGGAATaGCCCCAGCGGGAATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVYQEVTESEGIRQNDSLSPEE*PQRESA Trigger: TGCTGATTCCCGCTGGGGCCATTCCTCAGGGGAGAG...GGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACACGCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGCCTGGTTTTTGAGCTaGATCTTCCAGTCCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLEILVVISVPQVSCCHLAWFLS*IFQSSV Trigger: CACCGAGGACTGGAAGATCCAGCTCAAAAACCAGGC...AAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTACAGTACAGTTGAGCTaGAAGATCTGCCCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLTVQLS*KICPSP Trigger: AGGAGAAGGGCAGATCTTCCAGCTCAACTGTACTGT...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCACTCCACCTGCTGGCGTaGAATCTCAATGCTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPLHLLA*NLNAHF Trigger: GAAGTGAGCATTGAGATTTCACGCCAGCAGGTGGAG...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGCTTCGTAGTGCCTGCTaGGCTCCAGGCCACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILLRSAC*APGHTL Trigger: CAGTGTGTGGCCTGGAGCTCAGCAGGCACTACGAAG...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATCATTGGGATTTTGTCTaGGACATCATGCAGAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDHWDFV*DIMQSI Trigger: TATGCTCTGCATGATGTCTCAGACAAAATCCCAATG...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACTCGGCAAGGTCATCCTaGGGAGTGACAGCACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TESEGIRQNDSQWNPFSNSARSS*GVTAPE Trigger: CTCAGGTGCTGTCACTCCTCAGGATGACCTTGCCGA...GTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATCGGCAAGGTCATCCTaGGGAGTGACAGCACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QEVTESEGIRQNDSQWNPSARSS*GVTAPE Trigger: CTCAGGTGCTGTCACTCCTCAGGATGACCTTGCCGA...TGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCAGCACTGCCTGGTTTTTaGGCTGGATCTTCCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPALPGF*AGSSSP Trigger: AGGACTGGAAGATCCAGCTCAAAAACCAGGCAGTGC...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATATGCTGCCTTTAAAATaGAGAGCCTTGGGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VAILPVERLGPIWISSSDMLPLK*RALGSS Trigger: AGAAGAACCCAAGGCTCTTCATTTTAAAGGCAGCAT...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGCTCATCAGGATGCTTTGATGTTGCCACATCATCACTGAGTGAAGATCAAGCCAGTAGGTTCCTCTaGCACAGTACAGTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSSSGCFDVATSSLSEDQASRFL*HSTVEL Trigger: CAGCTCAACTGTACTGTGTCAGAGGAACCTACTGGC...TTGATCTTCACTCAGTGATGATGTGGCAACATCAAAGCATCCTGATGAGCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR TCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCATCATGGCCTCTTGTTTaGGGGGCATCCAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSSWPLV*GASRLL Trigger: CAGCAGCCTGGATGCCCCTCAAACAAGAGGCCATGA...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCAAGTACCTGTCCAGGTTaGGTTTATGGGCCAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPSTCPG*VYGPAS Trigger: GGATGCTGGCCCATAAACTCAACCTGGACAGGTACT...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGCTCACAATTAGACCTTaGGCGGCGGAGCCGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILLTIRP*AAEPVP Trigger: TGGCACCGGCTCCGCCGCTCAAGGTCTAATTGTGAG...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCGTTCTTGGGGGCTGGTaGTGTACACTCCCTCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: NKKRFLGNCKILYHTAYSVLGGW*CTLPPA Trigger: CGCAGGAGGGAGTGTACAGCACCAGCCCCCAAGAAC...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGGTTCTTGGGGGCTGGTaGTGTACACTCCCTCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILVLGGW*CTLPPA Trigger: CGCAGGAGGGAGTGTACAGCACCAGCCCCCAAGAAC...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTCATCAGGATGCTTTGATGTTGCCACATCATCACTGAGTGAAGATCAACTGCTGCATAGCTTCTaGCGGATAGGGAGAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: QSSSGCFDVATSSLSEDQLLHSF*RIGRGM Trigger: CATTCCTCTCCCTATCCGGCAGAAGCTATGCAGCAG...TTGATCTTCACTCAGTGATGATGTGGCAACATCAAAGCATCCTGATGAGCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR GCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCACTGCTGCATAGCTTCTaGCGGATAGGGAGAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPLLHSF*RIGRGM Trigger: CATTCCTCTCCCTATCCGGCAGAAGCTATGCAGCAG...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCGAGGGGCATCCAGGCTaGTGCATAGCTTCTGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: NKKRFLGNCKILYHTAYSEGHPG*CIASAG Trigger: TCCGGCAGAAGCTATGCAGCAGCCTGGATGCCCCTC...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCATCTGGGAAGTTCTGTaGTTCCCAAAGATCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISIWEVL*FPKIQD Trigger: ATCCTGGATCTTTGGGAAGCACAGAACTTCCCAGAT...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTATACTGTCCTTCTGCTaGCAAGGACACCACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLEILVVISVPQVSCCHLILSFC*QGHHCL Trigger: GAGACAGTGGTGTCCTTGGCAGCAGAAGGACAGTAT...AAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | CTTTACATAGAGAACTCTCCTCATGATAAGAGCAAGAACAGAAAGACTCTGACCGAGTCAGGAGCAGCCTaGATGCACAGCCCATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LYIENSPHDKSKNRKTLTESGAA*MHSPSV Trigger: CACTGATGGGCTGTGCATGCAGGCTGCTCCTGACTC...GGTCAGAGTCTTTCTGTTCTTGCTCTTATCATGAGGAGAGTTCTCTATGTAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR CCA 90 bp | GTAACTAGTGGGTTTGGCCATGACTGTCCTGATATATGGCAAGGGTTTCCAATGTCTGGGTGGCAGGGCTaGCTTTACAATACAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTSGFGHDCPDIWQGFPMSGWQG*LYNTGS Trigger: TGAACCTGTATTGTAAAGCCAGCCCTGCCACCCAGA...CATTGGAAACCCTTGCCATATATCAGGACAGTCATGGCCAAACCCACTAGTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR CCA 90 bp | GTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCTTCTACCTCAGCCACTaGGATCCCTTCAGGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VTESEGIRQNDSQWNPFSFYLSH*DPFRWP Trigger: CGGCCACCTGAAGGGATCCCAGTGGCTGAGGTAGAA...GCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTCCCTCCTGCGCCAGTaGGTGCATTCAGTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILSLLRQ*VHSVPQ Trigger: CTGTGGGACTGAATGCACCCACTGGCGCAGGAGGGA...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGCCCGTTCTTGGGGGCTaGTGCTGTACACTCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILPVLGG*CCTLPP Trigger: AGGAGGGAGTGTACAGCACCAGCCCCCAAGAACGGG...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCGACTCAAAGTCACGGTaGTTCTTCCGATACACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISDSKSR*FFRYTN Trigger: GTTTGTGTATCGGAAGAACCACCGTGACTTTGAGTC...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGCTCTCCCCTGAGGAATaGCCCCAGCGGGAATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILLSPEE*PQRESA Trigger: TGCTGATTCCCGCTGGGGCCATTCCTCAGGGGAGAG...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCATCCAGTCCTCGGTGCTaGGGTCTGCACAGTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSSSPRC*GLHSDA Trigger: TGCATCACTGTGCAGACCCCAGCACCGAGGACTGGA...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGCGTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCTCCAGTCCTCGGTGCTaGGGTCTGCACAGTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVYQEVTESEGIRQNDSSSPRC*GLHSDA Trigger: TGCATCACTGTGCAGACCCCAGCACCGAGGACTGGA...GGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACACGCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTTGTCCCTGCACTGCCTaGTTTTTGAGCTGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLEILVVISVPQVSCCHLCPCTA*FLSWIF Trigger: GAAGATCCAGCTCAAAAACCAGGCAGTGCAGGGACA...AAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | CTTTACATAGAGAACTCTCCTCATGATAAGAGCAAGAACAGAAAGACTCTGACCCAGCTGCTTTGGTGGTaGACTGCCCAACCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYIENSPHDKSKNRKTLTQLLWW*TAQPGH Trigger: ATGCCCTGGTTGGGCAGTCCACCACCAAAGCAGCTG...GGTCAGAGTCTTTCTGTTCTTGCTCTTATCATGAGGAGAGTTCTCTATGTAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR TCA 90 bp | GGGCATAGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCACTCGCTGTTGCACTTaGAGTAGATCTGGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHRCFLFNYVSGAAKFSFTRCCT*SRSGWQ Trigger: CTGCCACCCAGATCTACTTCAAGTGCAACAGCGAGT...GAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCTATGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | GGTCTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGAGAGCCACATCATCTaGGTCAGGAGCAGAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLEILVVISVPQVSCCHLESHII*VRSRRK Trigger: TTTTCTTCTGCTCCTGACTCAGATGATGTGGCTCTC...AAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | GGTCTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGTGCTGAGGAGTCAATaGTGTCAGACTCAAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLEILVVISVPQVSCCHLVLRSQ*CQTQSH Trigger: GTGACTTTGAGTCTGACATCATTGACTCCTCAGCAC...AAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCATTGATGTTCACAGGCTaGAAGCCGCCATTGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPLMFTG*KPPLSA Trigger: AGCACTCAATGGCGGCTTTCAGCCTGTGAACATCAA...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTCATTGGGATTTTGTCTaGGACATCATGCAGAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLHWDFV*DIMQSI Trigger: TATGCTCTGCATGATGTCTCAGACAAAATCCCAATG...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | CTTTACATAGAGAACTCTCCTCATGATAAGAGCAAGAACAGAAAGACTCTGACCGGTCATCCTGAGGAGTaGCAGCACCTGAGCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LYIENSPHDKSKNRKTLTGHPEE*QHLSCC Trigger: ACAACAGCTCAGGTGCTGTCACTCCTCAGGATGACC...GGTCAGAGTCTTTCTGTTCTTGCTCTTATCATGAGGAGAGTTCTCTATGTAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR TCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCACTGGGGTCTGCACAGTaGTGCAGAGTGAGGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSLGSAQ*CRVRMT Trigger: TGTCATCCTCACTCTGCATCACTGTGCAGACCCCAG...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTATGCTGCCTTTAAAATaGAGAGCCTTGGGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLMLPLK*RALGSS Trigger: AGAAGAACCCAAGGCTCTTCATTTTAAAGGCAGCAT...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | ATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACCTGAATACTTCTAGCTCATGGCCTCTTGTTTaGGGGGCATCCAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRQNDSQWNPFSNLNTSSSWPLV*GASRLL Trigger: CAGCAGCCTGGATGCCCCTCAAACAAGAGGCCATGA...GCTAGAAGTATTCAGGTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | GTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCGAGAGCCACATCATCTaGGTCAGGAGCAGCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VTESEGIRQNDSQWNPFSESHII*VRSSLH Trigger: ATGCAGGCTGCTCCTGACTCAGATGATGTGGCTCTC...GCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR GCA 90 bp | GGTCTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGGTAACACAAGCATCTaGAGCAAGTATCCTAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLEILVVISVPQVSCCHLGNTSI*SKYPSP Trigger: GGGACTAGGATACTTGCTGCAGATGCTTGTGTTACC...AAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTCATCAGGATGCTTTGATGTTGCCACATCATCACTGAGTGAAGATCAATTTCCCAAGGGTTCCTaGTCGAATGTCTTCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSSSGCFDVATSSLSEDQFPKGS*SNVFRR Trigger: TCTGCGGAAGACATTCGAGCAGGAACCCTTGGGAAA...TTGATCTTCACTCAGTGATGATGTGGCAACATCAAAGCATCCTGATGAGCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR GCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGCTGTACACTCCCTCCTaGGCCAGTGGGTGCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILLYTPS*ASGCIQ Trigger: CTGAATGCACCCACTGGCGCAGGAGGGAGTGTACAG...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCAAGGTACCAAATGCTGTaGAGGATGGGTCAGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPRYQML*RMGQSV Trigger: GACAGACTGACCCATCCTGCACAGCATTTGGTACCT...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | GTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCTCTTCCAGTCCTCGGTaGTGGGGTCTGCACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VTESEGIRQNDSQWNPFSSSSPR*WGLHSD Trigger: ATCACTGTGCAGACCCCAGCACCGAGGACTGGAAGA...GCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCACCATTGTCCCTGCACTaGCTGGTTTTTGAGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPPLSLH*LVFELD Trigger: ATCCAGCTCAAAAACCAGGCAGTGCAGGGACAATGG...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | GTAACTAGTGGGTTTGGCCATGACTGTCCTGATATATGGCAAGGGTTTCCAATGAGCTGTCCTCCCATTTaGCTCTCCAGTTGTAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VTSGFGHDCPDIWQGFPMSCPPI*LSSCRT Trigger: AGTTCTACAACTGGAGAGGCAAATGGGAGGACAGCT...CATTGGAAACCCTTGCCATATATCAGGACAGTCATGGCCAAACCCACTAGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR GCA 90 bp | CTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGCCATCTGGGAAGTTCTGTaGTTCCCAAAGATCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LEILVVISVPQVSCCHLAIWEVL*FPKIQD Trigger: ATCCTGGATCTTTGGGAAGCACAGAACTTCCCAGAT...GGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | ATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACCTGAATACTTCTAGCGGACGGCTGCCAGCATaGTCAGGTTTCCATCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IRQNDSQWNPFSNLNTSSGRLPA*SGFHLG Trigger: TCCCAGATGGAAACCTGAGCATGCTGGCAGCCGTCC...GCTAGAAGTATTCAGGTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCATTCTTCCAGGACGGCTaGCAGCATGCTCAGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSFFQDG*QHAQVS Trigger: GGAAACCTGAGCATGCTGGCAGCCGTCCTGGAAGAA...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | GTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCTTCTTCCAGGACGGCTaGCAGCATGCTCAGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTESEGIRQNDSQWNPFSFFQDG*QHAQVS Trigger: GGAAACCTGAGCATGCTGGCAGCCGTCCTGGAAGAA...GCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCAATACTGTCCTTCTGCTaGCAAGGACACCACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPILSFC*QGHHCL Trigger: GAGACAGTGGTGTCCTTGGCAGCAGAAGGACAGTAT...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCCAGGAGCAGCCTGCATaGACAGCCCATCAGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NKKRFLGNCKILYHTAYSQEQPA*TAHQCS Trigger: ACTGCACTGATGGGCTGTGCATGCAGGCTGCTCCTG...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR CCA 90 bp | ACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACTCAGGTGGCCGACACTaGAGTAAGACTTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TESEGIRQNDSQWNPFSNSGGRH*SKTSCS Trigger: GGAGCAGGAAGTCTTACTCCAGTGTCGGCCACCTGA...GTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTTCTACCTCAGCCACTaGGATCCCTTCAGGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILFYLSH*DPFRWP Trigger: CGGCCACCTGAAGGGATCCCAGTGGCTGAGGTAGAA...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCCCCGTTCTTGGGGGCTaGTGCTGTACACTCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSPVLGG*CCTLPP Trigger: AGGAGGGAGTGTACAGCACCAGCCCCCAAGAACGGG...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCAAAGGACTGGGTCATCTaGGGTGACAGTTTGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPKDWVI*GDSLDE Trigger: CTCATCCAAACTGTCACCCCAGATGACCCAGTCCTT...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCCTCTCCCCTGAGGAATaGCCCCAGCGGGAATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSLSPEE*PQRESA Trigger: TGCTGATTCCCGCTGGGGCCATTCCTCAGGGGAGAG...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCACTATCTCCAGTCCTCGGTGCTaGGGTCTGCACAGTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: RCFLFNYVSGAAKFSFTISSPRC*GLHSDA Trigger: TGCATCACTGTGCAGACCCCAGCACCGAGGACTGGA...GATAGTGAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCATCAGGATGCTTTGATGTTGCCACATCATCACTGAGTGAAGATCAAAGGTGTCCCTGCACTGCCTaGTTTTTGAGCTGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSGCFDVATSSLSEDQRCPCTA*FLSWIF Trigger: GAAGATCCAGCTCAAAAACCAGGCAGTGCAGGGACA...CCTTTGATCTTCACTCAGTGATGATGTGGCAACATCAAAGCATCCTGATGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR CCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCATTCTCTGTGAGGATATaGCAAGCCTCTGCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPFSVRI*QASASS Trigger: GCTGGATGCAGAGGCTTGCCATATCCTCACAGAGAA...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | AGATGGCACCAGGCACAAATAATTTGTTTTTCTACCCACCCACAGCAAGCAAGGAATGCTGAAAGCACTTaGTCCGGTGACAGTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RWHQAQIICFSTHPQQARNAEST*SGDSGD Trigger: ATCACCACTGTCACCGGACCAAGTGCTTTCAGCATT...CCTTGCTTGCTGTGGGTGGGTAGAAAAACAAATTATTTGTGCCTGGTGCCATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR TCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCAACTCGCTGTTGCACTTaGAGTAGATCTGGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSTRCCT*SRSGWQ Trigger: CTGCCACCCAGATCTACTTCAAGTGCAACAGCGAGT...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 |
||
| CDS-3UTR TCA 90 bp | CAAACAAACAAAACCCAGGATGGTCCCAAGGAGTATGCACAACTAACGTTTTATACTCGCTGTTGCACTTaGAGTAGATCTGGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTNKTQDGPKEYAQLTFYTRCCT*SRSGWQ Trigger: CTGCCACCCAGATCTACTTCAAGTGCAACAGCGAGT...ATAAAACGTTAGTTGTGCATACTCCTTGGGACCATCCTGGGTTTTGTTTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCAGGGTCTGTGCTCAGTTaGAATGGGGTAAATGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPGSVLS*NGVNES Trigger: GGATTCATTTACCCCATTTCAACTGAGCACAGACCC...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075282.10 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTAGCTGTTGTACACTTTaGTTTTCAAGTTGGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLSCCTL*FSSWVV Trigger: CACTACCCAACTTGAAAATCAAAGTGTACAACAGCT...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCACTATCGGTCATCCTGAGGAGTaGCAGCACCTGAGCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RCFLFNYVSGAAKFSFTIGHPEE*QHLSCC Trigger: ACAACAGCTCAGGTGCTGTCACTCCTCAGGATGACC...GATAGTGAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCTCGGCAAGGTCATCCTaGGGAGTGACAGCACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSSARSS*GVTAPE Trigger: CTCAGGTGCTGTCACTCCTCAGGATGACCTTGCCGA...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | GTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAGTACCTGTCCAGGTTaGGTTTATGGGCCAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VYQEVTESEGIRQNDSQWSTCPG*VYGPAS Trigger: GGATGCTGGCCCATAAACTCAACCTGGACAGGTACT...CCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCAAGTACCTGTCCAGGTTaGGTTTATGGGCCAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSSTCPG*VYGPAS Trigger: GGATGCTGGCCCATAAACTCAACCTGGACAGGTACT...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | GTTAGCGTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCAGTACCTGTCCAGGTTaGGTTTATGGGCCAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VSVYQEVTESEGIRQNDSSTCPG*VYGPAS Trigger: GGATGCTGGCCCATAAACTCAACCTGGACAGGTACT...GGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACACGCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTGGCGTGAAATCTCAATaGTCACTTCTCTCACAATTA | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLGVKSQ*SLLSQL Trigger: TAATTGTGAGAGAAGTGAGCATTGAGATTTCACGCC...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCATCAATACTGTCCTTCTaGTGCCAAGGACACCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPSILSF*CQGHHC Trigger: ACAGTGGTGTCCTTGGCAGCAGAAGGACAGTATTGA...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCACTATCTCAGGTGGCCGACACTaGAGTAAGACTTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RCFLFNYVSGAAKFSFTISGGRH*SKTSCS Trigger: GGAGCAGGAAGTCTTACTCCAGTGTCGGCCACCTGA...GATAGTGAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCTTCTACCTCAGCCACTaGGATCCCTTCAGGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSFYLSH*DPFRWP Trigger: CGGCCACCTGAAGGGATCCCAGTGGCTGAGGTAGAA...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | GGGCATAGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCCATCAGTGCAGTTCTTaGATTGGAGGACCAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GHRCFLFNYVSGAAKFSFHQCSS*IGGPGH Trigger: ATGGCCTGGTCCTCCAATCCAAGAACTGCACTGATG...GAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCTATGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCAATCCATATTCATTCTaGGGTCTGTGCTCAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KFPVAILPVERLGPIWISNPYSF*GLCSVE Trigger: TTCAACTGAGCACAGACCCCAGAATGAATATGGATT...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTAATCCATATTCATTCTaGGGTCTGTGCTCAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLNPYSF*GLCSVE Trigger: TTCAACTGAGCACAGACCCCAGAATGAATATGGATT...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | AGAGATGTAGGCAACCATCTACTCTCTTCCAGATGTGAACTGTCTAAATCCTACTTCTCTAGCAAGGACTaGGTCATCTGGGGTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDVGNHLLSSRCELSKSYFSSKD*VIWGDS Trigger: ACTGTCACCCCAGATGACCCAGTCCTTGCTAGAGAA...GTAGGATTTAGACAGTTCACATCTGGAAGAGAGTAGATGGTTGCCTACATCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR CCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCTCCAGTCCTCGGTGCTaGGGTCTGCACAGTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSSSPRC*GLHSDA Trigger: TGCATCACTGTGCAGACCCCAGCACCGAGGACTGGA...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGCGTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCGCCTGGTTTTTGAGCTaGATCTTCCAGTCCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSVYQEVTESEGIRQNDSAWFLS*IFQSSV Trigger: CACCGAGGACTGGAAGATCCAGCTCAAAAACCAGGC...GGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACACGCTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCAGCCTGGTTTTTGAGCTaGATCTTCCAGTCCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSAWFLS*IFQSSV Trigger: CACCGAGGACTGGAAGATCCAGCTCAAAAACCAGGC...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | GGGCATAGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCTTCTCTGTGAGGATATaGCAAGCCTCTGCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHRCFLFNYVSGAAKFSFFSVRI*QASASS Trigger: GCTGGATGCAGAGGCTTGCCATATCCTCACAGAGAA...GAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCTATGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCAAATGCTGAAAGCACTTaGTCCGGTGACAGTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPNAEST*SGDSGD Trigger: ATCACCACTGTCACCGGACCAAGTGCTTTCAGCATT...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| 3UTR CAA 72 bp | GCTGCATGGGCTTTTTGTAGAAATGGTCTTGAGATCTaGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AAWAFCRNGLEI*VVISVPQVSCC Trigger: GCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAGACCATTTCTACAAAAAGCCCATGCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCATTGATGTTCACAGGCTaGAAGCCGCCATTGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSLMFTG*KPPLSA Trigger: AGCACTCAATGGCGGCTTTCAGCCTGTGAACATCAA...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | CTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGCCAGCTGTTGTACACTTTaGTTTTCAAGTTGGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEILVVISVPQVSCCHLASCCTL*FSSWVV Trigger: CACTACCCAACTTGAAAATCAAAGTGTACAACAGCT...GGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCGCACTGCCTGGTTTTTaGGCTGGATCTTCCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NKKRFLGNCKILYHTAYSALPGF*AGSSSP Trigger: AGGACTGGAAGATCCAGCTCAAAAACCAGGCAGTGC...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCACTGACACAGTACAGTTaGGCTGGAAGATCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEVTESEGIRQNDSQWNPLTQYS*AGRSAL Trigger: AAGGGCAGATCTTCCAGCTCAACTGTACTGTGTCAG...TGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| CDS-3UTR GCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCATGGTGCAGGTTCTTGTaGGTTTCTGATATCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSWCRFL*VSDILA Trigger: GGCGAGGATATCAGAAACGCACAAGAACCTGCACCA...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| CDS-3UTR GCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCGTGGGGCTGGGTTGGTaGAGGTTCTTGTGCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSVGLGW*RFLCVS Trigger: AGAAACGCACAAGAACCTGCACCAACCCAGCCCCAC...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| CDS-3UTR GCA 90 bp | AGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCACTATCTCCTCCCATTGTCCCTaGACTGCCTGGTTTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RCFLFNYVSGAAKFSFTISSHCP*TAWFLS Trigger: GCTCAAAAACCAGGCAGTGCAGGGACAATGGGAGGA...GATAGTGAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| CDS-3UTR GCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCAGATATGGCAAGCCTCTaGATCCAGCTGAATGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPDMASL*IQLNVT Trigger: TGTTACATTCAGCTGGATGCAGAGGCTTGCCATATC...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCAGCCGCACACAGAGTTTaGAAACCAGTTCCACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSAAHRV*KPVPLC Trigger: ACACAGTGGAACTGGTTTGCAAACTCTGTGTGCGGC...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| CDS-3UTR GCA 90 bp | CAAACAAACAAAACCCAGGATGGTCCCAAGGAGTATGCACAACTAACGTTTTATGCCGCACACAGAGTTTaGAAACCAGTTCCACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTNKTQDGPKEYAQLTFYAAHRV*KPVPLC Trigger: ACACAGTGGAACTGGTTTGCAAACTCTGTGTGCGGC...ATAAAACGTTAGTTGTGCATACTCCTTGGGACCATCCTGGGTTTTGTTTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| CDS-3UTR GCA 90 bp | GTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCCCTTCTCCTTCAACCTaGCGCACACAGAGTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VTESEGIRQNDSQWNPFSPSPST*RTQSLQ Trigger: TTGCAAACTCTGTGTGCGGCAGGTTGAAGGAGAAGG...GCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| CDS-3UTR GCA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCAATCTGGGAAGTTCTGTaGTTCCCAAAGATCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPIWEVL*FPKIQD Trigger: ATCCTGGATCTTTGGGAAGCACAGAACTTCCCAGAT...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| CDS-3UTR GCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCAATACTGTCCTTCTGCTaGCAAGGACACCACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSILSFC*QGHHCL Trigger: GAGACAGTGGTGTCCTTGGCAGCAGAAGGACAGTAT...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| CDS-3UTR CCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCATGGCAATGGCTCAGGTaGGTCAGATGGAAAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSWQWLR*VRWKGF Trigger: GAAACCTTTCCATCTGACCCACCTGAGCCATTGCCA...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 |
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| CDS-3UTR CCA 90 bp | GTTAGCGTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCTGGCAATGGCTCAGGTaGGTCAGATGGAAAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSVYQEVTESEGIRQNDSWQWLR*VRWKGF Trigger: GAAACCTTTCCATCTGACCCACCTGAGCCATTGCCA...GGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACACGCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| CDS-3UTR CCA 90 bp | GTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGTCTGGGTGGCAGGGCTaGCTTTACAATACAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VYQEVTESEGIRQNDSQWSGWQG*LYNTGS Trigger: TGAACCTGTATTGTAAAGCCAGCCCTGCCACCCAGA...CCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| CDS-3UTR CCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCATTCTCTGTGAGGATATaGCAAGCCTCTGCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSFSVRI*QASASS Trigger: GCTGGATGCAGAGGCTTGCCATATCCTCACAGAGAA...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| CDS-3UTR CCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCATCCAGGTTGAGTTTATaGGCCAGCATCCTCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSSRLSL*ASILQS Trigger: TGACTGGAGGATGCTGGCCCATAAACTCAACCTGGA...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| CDS-3UTR CCA 90 bp | GTTAGCGTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCTCCAGGTTGAGTTTATaGGCCAGCATCCTCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVYQEVTESEGIRQNDSSRLSL*ASILQS Trigger: TGACTGGAGGATGCTGGCCCATAAACTCAACCTGGA...GGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACACGCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| CDS-3UTR TCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCCTCCACCTGCTGGCGTaGAATCTCAATGCTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSLHLLA*NLNAHF Trigger: GAAGTGAGCATTGAGATTTCACGCCAGCAGGTGGAG...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
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| CDS-3UTR TCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCAGTGCTGAGGAGTCAATaGTGTCAGACTCAAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSVLRSQ*CQTQSH Trigger: GTGACTTTGAGTCTGACATCATTGACTCCTCAGCAC...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTTGATGTTCACAGGCTaGAAGCCGCCATTGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILLMFTG*KPPLSA Trigger: AGCACTCAATGGCGGCTTTCAGCCTGTGAACATCAA...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | GTTAGCGTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCAGGAGTGACAGCACCTaGGCTGTTGTACACTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSVYQEVTESEGIRQNDSRSDST*AVVHFD Trigger: ATCAAAGTGTACAACAGCTCAGGTGCTGTCACTCCT...GGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACACGCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACAGGAGTGACAGCACCTaGGCTGTTGTACACTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TESEGIRQNDSQWNPFSNRSDST*AVVHFD Trigger: ATCAAAGTGTACAACAGCTCAGGTGCTGTCACTCCT...GTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| CDS-3UTR TCA 90 bp | AATTCTTTCTTACATTTGTACATGTTGGCTGACAAGAGTAAATGCAGGCAGTTTCTGGGGTCTGCACAGTaGTGCAGAGTGAGGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: NSFLHLYMLADKSKCRQFLGSAQ*CRVRMT Trigger: TGTCATCCTCACTCTGCATCACTGTGCAGACCCCAG...AAACTGCCTGCATTTACTCTTGTCAGCCAACATGTACAAATGTAAGAAAGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR TCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGCTGACACAGTACAGTTaGGCTGGAAGATCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILLTQYS*AGRSAL Trigger: AAGGGCAGATCTTCCAGCTCAACTGTACTGTGTCAG...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCAGGTAACACAAGCATCTaGAGCAAGTATCCTAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QEVTESEGIRQNDSQWNPGNTSI*SKYPSP Trigger: GGGACTAGGATACTTGCTGCAGATGCTTGTGTTACC...TGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | GTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAACAGTTCCTCCACCTaGTGGCGTGAAATCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: VYQEVTESEGIRQNDSQWNSSST*WREISM Trigger: CATTGAGATTTCACGCCAGCAGGTGGAGGAACTGTT...CCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTTTCCCAAGGGTTCCTaGTCGAATGTCTTCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILFPKGS*SNVFRR Trigger: TCTGCGGAAGACATTCGAGCAGGAACCCTTGGGAAA...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCTTTCCCAAGGGTTCCTaGTCGAATGTCTTCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NKKRFLGNCKILYHTAYSFPKGS*SNVFRR Trigger: TCTGCGGAAGACATTCGAGCAGGAACCCTTGGGAAA...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCTGGTGCAGGTTCTTGTaGGTTTCTGATATCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKKRFLGNCKILYHTAYSWCRFL*VSDILA Trigger: GGCGAGGATATCAGAAACGCACAAGAACCTGCACCA...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCACTATCCCATTGTCCCTGCACTaGCTGGTTTTTGAGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RCFLFNYVSGAAKFSFTIPLSLH*LVFELD Trigger: ATCCAGCTCAAAAACCAGGCAGTGCAGGGACAATGG...GATAGTGAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCTCCTCCCATTGTCCCTaGACTGCCTGGTTTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSSSHCP*TAWFLS Trigger: GCTCAAAAACCAGGCAGTGCAGGGACAATGGGAGGA...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCAAGCTGTCCTCCCATTTaGCTCTCCAGTTGTAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSSCPPI*LSSCRT Trigger: AGTTCTACAACTGGAGAGGCAAATGGGAGGACAGCT...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAAACAAAACCCAGGATGGTCCCAAGGAGTATGCACAACTAACGTTTTATAGCTGTCCTCCCATTTaGCTCTCCAGTTGTAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QTNKTQDGPKEYAQLTFYSCPPI*LSSCRT Trigger: AGTTCTACAACTGGAGAGGCAAATGGGAGGACAGCT...ATAAAACGTTAGTTGTGCATACTCCTTGGGACCATCCTGGGTTTTGTTTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCGCCGCACACAGAGTTTaGAAACCAGTTCCACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKKRFLGNCKILYHTAYSAAHRV*KPVPLC Trigger: ACACAGTGGAACTGGTTTGCAAACTCTGTGTGCGGC...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCCCTTCTCCTTCAACCTaGCGCACACAGAGTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NKKRFLGNCKILYHTAYSPSPST*RTQSLQ Trigger: TTGCAAACTCTGTGTGCGGCAGGTTGAAGGAGAAGG...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGATACTGTCCTTCTGCTaGCAAGGACACCACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILILSFC*QGHHCL Trigger: GAGACAGTGGTGTCCTTGGCAGCAGAAGGACAGTAT...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCATCAATACTGTCCTTCTaGTGCCAAGGACACCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSSILSF*CQGHHC Trigger: ACAGTGGTGTCCTTGGCAGCAGAAGGACAGTATTGA...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACCTGAATACTTCTAGCTGGCAATGGCTCAGGTaGGTCAGATGGAAAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IRQNDSQWNPFSNLNTSSWQWLR*VRWKGF Trigger: GAAACCTTTCCATCTGACCCACCTGAGCCATTGCCA...GCTAGAAGTATTCAGGTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCGTGCAGTTCTTGGATTaGAGGACCAGGCCATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSVQFLD*RTRPSQ Trigger: CTGTGATGGCCTGGTCCTCCAATCCAAGAACTGCAC...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCCATCAGTGCAGTTCTTaGATTGGAGGACCAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKKRFLGNCKILYHTAYSHQCSS*IGGPGH Trigger: ATGGCCTGGTCCTCCAATCCAAGAACTGCACTGATG...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGAAGGACTGGGTCATCTaGGGTGACAGTTTGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILKDWVI*GDSLDE Trigger: CTCATCCAAACTGTCACCCCAGATGACCCAGTCCTT...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCGCCTGGTTTTTGAGCTaGATCTTCCAGTCCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSAWFLS*IFQSSV Trigger: CACCGAGGACTGGAAGATCCAGCTCAAAAACCAGGC...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCAACAGTACAGTTGAGCTaGAAGATCTGCCCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSTVQLS*KICPSP Trigger: AGGAGAAGGGCAGATCTTCCAGCTCAACTGTACTGT...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGCGTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCACAGTACAGTTGAGCTaGAAGATCTGCCCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSVYQEVTESEGIRQNDSTVQLS*KICPSP Trigger: AGGAGAAGGGCAGATCTTCCAGCTCAACTGTACTGT...GGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACACGCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCAAATGCTGAAAGCACTTaGTCCGGTGACAGTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QEVTESEGIRQNDSQWNPNAEST*SGDSGD Trigger: ATCACCACTGTCACCGGACCAAGTGCTTTCAGCATT...TGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| 3UTR CAA 72 bp | AGAACATCCAGTCCAGACCTCTCAGTTTGGATTTCTTaGATGGTTCCAAAATCCAAGAAGTGTAGAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: RTSSPDLSVWIS*MVPKSKKCRGT Trigger: GGTTCCTCTACACTTCTTGGATTTTGGAACCATCAAAGAAATCCAAACTGAGAGGTCTGGACTGGATGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR TCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTTGAAATGGGGTAAATaGATCCCTGCATGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILLKWGK*IPACTA Trigger: GGCTGTGCATGCAGGGATTCATTTACCCCATTTCAA...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075282.10 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACCTGAATACTTCTAGCTTGAAATGGGGTAAATaGATCCCTGCATGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IRQNDSQWNPFSNLNTSSLKWGK*IPACTA Trigger: GGCTGTGCATGCAGGGATTCATTTACCCCATTTCAA...GCTAGAAGTATTCAGGTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGGTGCTGAGGAGTCAATaGTGTCAGACTCAAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILVLRSQ*CQTQSH Trigger: GTGACTTTGAGTCTGACATCATTGACTCCTCAGCAC...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | GGGCATAGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCCATTGGGATTTTGTCTaGGACATCATGCAGAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: GHRCFLFNYVSGAAKFSFHWDFV*DIMQSI Trigger: TATGCTCTGCATGATGTCTCAGACAAAATCCCAATG...GAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCTATGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGAGGAGTGACAGCACCTaGGCTGTTGTACACTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILRSDST*AVVHFD Trigger: ATCAAAGTGTACAACAGCTCAGGTGCTGTCACTCCT...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGGGTAACACAAGCATCTaGAGCAAGTATCCTAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILGNTSI*SKYPSP Trigger: GGGACTAGGATACTTGCTGCAGATGCTTGTGTTACC...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCAACAGTTCCTCCACCTaGTGGCGTGAAATCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: NKKRFLGNCKILYHTAYSNSSST*WREISM Trigger: CATTGAGATTTCACGCCAGCAGGTGGAGGAACTGTT...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCACTATCAACAGTTCCTCCACCTaGTGGCGTGAAATCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RCFLFNYVSGAAKFSFTINSSST*WREISM Trigger: CATTGAGATTTCACGCCAGCAGGTGGAGGAACTGTT...GATAGTGAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCTGGTGCAGGTTCTTGTaGGTTTCTGATATCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSWCRFL*VSDILA Trigger: GGCGAGGATATCAGAAACGCACAAGAACCTGCACCA...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCAGGTACCAAATGCTGTaGAGGATGGGTCAGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSRYQML*RMGQSV Trigger: GACAGACTGACCCATCCTGCACAGCATTTGGTACCT...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCCCATTGTCCCTGCACTaGCTGGTTTTTGAGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSPLSLH*LVFELD Trigger: ATCCAGCTCAAAAACCAGGCAGTGCAGGGACAATGG...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR GCA 90 bp | GTTAGCGTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCATCTGGGAAGTTCTGTaGTTCCCAAAGATCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSVYQEVTESEGIRQNDSIWEVL*FPKIQD Trigger: ATCCTGGATCTTTGGGAAGCACAGAACTTCCCAGAT...GGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACACGCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTCAATACTGTCCTTCTaGTGCCAAGGACACCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILSILSF*CQGHHC Trigger: ACAGTGGTGTCCTTGGCAGCAGAAGGACAGTATTGA...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCAGACTCAAAGTCACGGTaGTTCTTCCGATACACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSDSKSR*FFRYTN Trigger: GTTTGTGTATCGGAAGAACCACCGTGACTTTGAGTC...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACCTGAATACTTCTAGCACAGTACAGTTGAGCTaGAAGATCTGCCCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IRQNDSQWNPFSNLNTSSTVQLS*KICPSP Trigger: AGGAGAAGGGCAGATCTTCCAGCTCAACTGTACTGT...GCTAGAAGTATTCAGGTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCTCCAGGTTGAGTTTATaGGCCAGCATCCTCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSSRLSL*ASILQS Trigger: TGACTGGAGGATGCTGGCCCATAAACTCAACCTGGA...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| 3UTR CAA 72 bp | GAAGTTACACAGAACATCCAGTCCAGACCTCTCAGTTaGGATTTCTTTGATGGTTCCAAAATCCAAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVTQNIQSRPLS*DFFDGSKIQEV Trigger: CACTTCTTGGATTTTGGAACCATCAAAGAAATCCAAACTGAGAGGTCTGGACTGGATGTTCTGTGTAACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| 3UTR CAA 72 bp | TTCATTCAGCTGCATGGGCTTTTTGTAGAAATGGTCTaGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FIQLHGLFVEMV*RSWWLYLSPKF Trigger: AAACTTGGGGGACAGATATAACCACCAAGATCTCAAGACCATTTCTACAAAAAGCCCATGCAGCTGAATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCGAGAGCCACATCATCTaGGTCAGGAGCAGAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSESHII*VRSRRK Trigger: TTTTCTTCTGCTCCTGACTCAGATGATGTGGCTCTC...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075282.10 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCAGGAGTGACAGCACCTaGGCTGTTGTACACTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSRSDST*AVVHFD Trigger: ATCAAAGTGTACAACAGCTCAGGTGCTGTCACTCCT...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | GTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGATGCTGCCTTTAAAATaGAGAGCCTTGGGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VYQEVTESEGIRQNDSQWMLPLK*RALGSS Trigger: AGAAGAACCCAAGGCTCTTCATTTTAAAGGCAGCAT...CCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR GCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGGATATGGCAAGCCTCTaGATCCAGCTGAATGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILDMASL*IQLNVT Trigger: TGTTACATTCAGCTGGATGCAGAGGCTTGCCATATC...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGGACTCAAAGTCACGGTaGTTCTTCCGATACACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILDSKSR*FFRYTN Trigger: GTTTGTGTATCGGAAGAACCACCGTGACTTTGAGTC...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCAATGCTGAAAGCACTTaGTCCGGTGACAGTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSNAEST*SGDSGD Trigger: ATCACCACTGTCACCGGACCAAGTGCTTTCAGCATT...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGCATTGGGATTTTGTCTaGGACATCATGCAGAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILHWDFV*DIMQSI Trigger: TATGCTCTGCATGATGTCTCAGACAAAATCCCAATG...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR TCA 90 bp | CTTTACATAGAGAACTCTCCTCATGATAAGAGCAAGAACAGAAAGACTCTGACCAGCTGTTGTACACTTTaGTTTTCAAGTTGGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LYIENSPHDKSKNRKTLTSCCTL*FSSWVV Trigger: CACTACCCAACTTGAAAATCAAAGTGTACAACAGCT...GGTCAGAGTCTTTCTGTTCTTGCTCTTATCATGAGGAGAGTTCTCTATGTAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR GCA 90 bp | GTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGGGCGTGAAATCTCAATaGTCACTTCTCTCACAATTA | + |
|
Preference number: 4 (lower is better) Translates to: VYQEVTESEGIRQNDSQWGVKSQ*SLLSQL Trigger: TAATTGTGAGAGAAGTGAGCATTGAGATTTCACGCC...CCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR TCA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGAGCTGTTGTACACTTTaGTTTTCAAGTTGGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIHLDSNKKRFLGNCKILSCCTL*FSSWVV Trigger: CACTACCCAACTTGAAAATCAAAGTGTACAACAGCT...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACCTGAATACTTCTAGCAATCCATATTCATTCTaGGGTCTGTGCTCAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IRQNDSQWNPFSNLNTSSNPYSF*GLCSVE Trigger: TTCAACTGAGCACAGACCCCAGAATGAATATGGATT...GCTAGAAGTATTCAGGTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR CCA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCACCAGATGTGGTAAAATaGAATTTCCTGATACTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRFSTSLIPMPILVQQVSPDVVK*NFLILS Trigger: GCTAAGTATCAGGAAATTCCATTTTACCACATCTGG...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGCGTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCCAGATGTGGTAAAATaGAATTTCCTGATACTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSVYQEVTESEGIRQNDSPDVVK*NFLILS Trigger: GCTAAGTATCAGGAAATTCCATTTTACCACATCTGG...GGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACACGCTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| 3UTR CAA 72 bp | GAAGAGATTAATTTGCTCAGGTCAGGATGGAATTCTTaGTGTAGCAGAGACAATGTGTCTGCTTTGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: EEINLLRSGWNS*CSRDNVSALKM Trigger: CATTTTCAAAGCAGACACATTGTCTCTGCTACACAAAGAATTCCATCCTGACCTGAGCAAATTAATCTCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR GCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCGGCGTGAAATCTCAATaGTCACTTCTCTCACAATTA | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSGVKSQ*SLLSQL Trigger: TAATTGTGAGAGAAGTGAGCATTGAGATTTCACGCC...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CCA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCCCAGATGTGGTAAAATaGAATTTCCTGATACTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSPDVVK*NFLILS Trigger: GCTAAGTATCAGGAAATTCCATTTTACCACATCTGG...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS GCA 90 bp | GTGCCACTGGCGCTTAGCAGGGCCAGGGCAGGTAACACAAGCATCTaGAGCAAGTATCCTAGTCCCAGTCCGCAGCGGGCCGCTGTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPLALSRARAGNTSI*SKYPSPSPQRAAVA Trigger: GGCGACAGCGGCCCGCTGCGGACTGGGACTAGGATACTTGCTGCAGATGCTTGTGTTACCTGCCCTGGCCCTGCTAAGCGCCAGTGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS GCA 90 bp | GAGGACCAGGCCATCACAGTCCTTACCCCCGTTCTTGGGGGCTGGTaGTGTACACTCCCTCCTGCGCCAGTGGGTGCATTCAGTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: EDQAITVLTPVLGGW*CTLPPAPVGAFSPT Trigger: TGTGGGACTGAATGCACCCACTGGCGCAGGAGGGAGTGTACAGCACCAGCCCCCAAGAACGGGGGTAAGGACTGTGATGGCCTGGTCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CCA 90 bp | TTGGAGGACCAGGCCATCACAGTCCTTACCCCCGTTCTTGGGGGCTaGTGCTGTACACTCCCTCCTGCGCCAGTGGGTGCATTCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LEDQAITVLTPVLGG*CCTLPPAPVGAFSP Trigger: GGGACTGAATGCACCCACTGGCGCAGGAGGGAGTGTACAGCACCAGCCCCCAAGAACGGGGGTAAGGACTGTGATGGCCTGGTCCTCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CCA 90 bp | CCCCCGTTCTTGGGGGCTGGTGCTGTACACTCCCTCCTGCGCCAGTaGGTGCATTCAGTCCCACAGGTTGACCATTTGCTCCATGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PPFLGAGAVHSLLRQ*VHSVPQVDHLLHEV Trigger: GACTTCATGGAGCAAATGGTCAACCTGTGGGACTGAATGCACCCACTGGCGCAGGAGGGAGTGTACAGCACCAGCCCCCAAGAACGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CCA 90 bp | TCTTGGATTGGAGGACCAGGCCATCACAGTCCTTACCCCCGTTCTTaGGGGCTGGTGCTGTACACTCCCTCCTGCGCCAGTGGGTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: SWIGGPGHHSPYPRS*GLVLYTPSCASGCI Trigger: AATGCACCCACTGGCGCAGGAGGGAGTGTACAGCACCAGCCCCCAAGAACGGGGGTAAGGACTGTGATGGCCTGGTCCTCCAATCCAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CCA 90 bp | TCACTTCTCTCACAATTAGACCTTGAGCGGCGGAGCCGGTGCCACTaGCGCTTAGCAGGGCCAGGGCAGGTAACACAAGCATCTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLSQLDLERRSRCH*RLAGPGQVTQASAA Trigger: TGCTGCAGATGCTTGTGTTACCTGCCCTGGCCCTGCTAAGCGCCAGTGGCACCGGCTCCGCCGCTCAAGGTCTAATTGTGAGAGAAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130636.8 |
||
| CDS GCA 90 bp | GCAGCAGAGGGGCCCAAAGATGGCCAGTTTAAGACGCTTGGCAGCTaGTTTGGTGGTGGACTGCCCAACCAGGGCATAGGTACTGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AAEGPKDGQFKTLGS*FGGGLPNQGIGTEV Trigger: AACCTCAGTACCTATGCCCTGGTTGGGCAGTCCACCACCAAAGCAGCTGCCAAGCGTCTTAAACTGGCCATCTTTGGGCCCCTCTGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS GCA 90 bp | CAATGCTCACTTCTCTCACAATTAGACCTTGAGCGGCGGAGCCGGTaGCACTGGCGCTTAGCAGGGCCAGGGCAGGTAACACAAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QCSLLSQLDLERRSR*HWRLAGPGQVTQAS Trigger: AGATGCTTGTGTTACCTGCCCTGGCCCTGCTAAGCGCCAGTGGCACCGGCTCCGCCGCTCAAGGTCTAATTGTGAGAGAAGTGAGCATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130636.8 |
||
| CDS TCA 90 bp | AGGTTGAGTTTATGGGCCAGCATCCTCCAGTCATGGCCTCTTGTTTaGGGGGCATCCAGGCTGCTGCATAGCTTCTGCCGGATAGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLSLWASILQSWPLV*GASRLLHSFCRIGR Trigger: TCTCCCTATCCGGCAGAAGCTATGCAGCAGCCTGGATGCCCCTCAAACAAGAGGCCATGACTGGAGGATGCTGGCCCATAAACTCAACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CCA 90 bp | AGCCATTCTACCTCAGCCACTGGGATCCCTTCAGGTGGCCGACACTaGAGTAAGACTTCCTGCTCCAAGGACACTTCCTTTCCCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SHSTSATGIPSGGRH*SKTSCSKDTSFPKG Trigger: ACCCTTGGGAAAGGAAGTGTCCTTGGAGCAGGAAGTCTTACTCCAGTGTCGGCCACCTGAAGGGATCCCAGTGGCTGAGGTAGAATGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS GCA 90 bp | CAGGACGGCTGCCAGCATGCTCAGGTTTCCATCTGGGAAGTTCTGTaGTTCCCAAAGATCCAGGATTACGCCAGTTGGGCTCGATTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QDGCQHAQVSIWEVL*FPKIQDYASWARFG Trigger: ACCAAATCGAGCCCAACTGGCGTAATCCTGGATCTTTGGGAAGCACAGAACTTCCCAGATGGAAACCTGAGCATGCTGGCAGCCGTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CCA 90 bp | GAGGTGACCCCCAAGAGAGTTGAAGGTACCAAATGCTGTGCAGGATaGGTCAGTCTGTCTTGCGAGGCTCTGGTTCTTCAGGTTAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EVTPKRVEGTKCCAG*VSLSCEALVLQVKG Trigger: GCCCTTAACCTGAAGAACCAGAGCCTCGCAAGACAGACTGACCCATCCTGCACAGCATTTGGTACCTTCAACTCTCTTGGGGGTCACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATTCCAGTCATGGCCTCTaGTTTGAGGGGCATCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VAILPVERLGPIWISSSDSSHGL*FEGHPG Trigger: GCCTGGATGCCCCTCAAACAAGAGGCCATGACTGGA...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS TCA 90 bp | GGGACAGCCAGGAGATCTTGTCTGGCAGCCTTGATGTTCACAGGCTaGAAGCCGCCATTGAGTGCTGAGGAGTCAATGATGTCAGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: GTARRSCLAALMFTG*KPPLSAEESMMSDS Trigger: TGAGTCTGACATCATTGACTCCTCAGCACTCAATGGCGGCTTTCAGCCTGTGAACATCAAGGCTGCCAGACAAGATCTCCTGGCTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS TCA 90 bp | GGATATGGCAAGCCTCTGCATCCAGCTGAATGTAACAGGGGGTTGTaGAGTTCTCCTCCCCAACCACCACAACATCCTCCCATTGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GYGKPLHPAECNRGL*SSPPQPPQHPPIVP Trigger: AGGGACAATGGGAGGATGTTGTGGTGGTTGGGGAGGAGAACTTCACAACCCCCTGTTACATTCAGCTGGATGCAGAGGCTTGCCATATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS GCA 90 bp | CAGGGCATAGGTACTGAGGTTCTCTGTGAGGATATGGCAAGCCTCTaGATCCAGCTGAATGTAACAGGGGGTTGTGAAGTTCTCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QGIGTEVLCEDMASL*IQLNVTGGCEVLLP Trigger: GGGGAGGAGAACTTCACAACCCCCTGTTACATTCAGCTGGATGCAGAGGCTTGCCATATCCTCACAGAGAACCTCAGTACCTATGCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTTGAGTGGGGCTGGGTaGGTGCAGGTTCTTGTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: KFPVAILPVERLGPIWISLSGAG*VQVLVR Trigger: ACGCACAAGAACCTGCACCAACCCAGCCCCACTCAA...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AGAGTAAATGCAGGCAGTTTACAAACCAAGGGGACGGCAGGTAAATTGGGTGAGTCCTTACCCCCGTTCTaGGGGGCTGGTGCTGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: RVNAGSLQTKGTAGKLGESLPPF*GAGAVH Trigger: GTGTACAGCACCAGCCCCCAAGAACGGGGGTAAGGA...CTCACCCAATTTACCTGCCGTCCCCTTGGTTTGTAAACTGCCTGCATTTACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR CAA 90 bp | CTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGCCTCCTTACCCCCGTTCTaGGGGGCTGGTGCTGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: LEILVVISVPQVSCCHLASLPPF*GAGAVH Trigger: GTGTACAGCACCAGCCCCCAAGAACGGGGGTAAGGA...GGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATCCATCAGTGCAGTTCTaGGATTGGAGGACCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VAILPVERLGPIWISSSDPSVQF*DWRTRP Trigger: TGGCCTGGTCCTCCAATCCAAGAACTGCACTGATGG...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTGTCATGGCCTCTTGTTaGAGGGGCATCCAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLVMASC*RGIQAA Trigger: AGCAGCCTGGATGCCCCTCAAACAAGAGGCCATGAC...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS TCA 90 bp | AGTCACGGTGGTTCTTCCGATACACAAACAGGGCCACCACAACAGTaGTCGCCAGACAGACTGTTACAGCGATCACAATCCCCACGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SHGGSSDTQTGPPQQ*SPDRLLQRSQSPRR Trigger: TCTACGTGGGGATTGTGATCGCTGTAACAGTCTGTCTGGCGATCACTGTTGTGGTGGCCCTGTTTGTGTATCGGAAGAACCACCGTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS GCA 90 bp | AGTAAGACTTCCTGCTCCAAGGACACTTCCTTTCCCAAGGGTTCCTaGTCGAATGTCTTCCGCAGATACGCAATGCGCACGTATGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKTSCSKDTSFPKGS*SNVFRRYAMRTYAF Trigger: GAAGGCATACGTGCGCATTGCGTATCTGCGGAAGACATTCGAGCAGGAACCCTTGGGAAAGGAAGTGTCCTTGGAGCAGGAAGTCTTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CCA 90 bp | AGGCTCTGGTTCTTCAGGTTAAGGGCCTCATTCTCTAGCAAGGACTaGGTCATCTGGGGTGACAGTTTGGATGAGAACTCGGCAAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLWFFRLRASFSSKD*VIWGDSLDENSARS Trigger: TGACCTTGCCGAGTTCTCATCCAAACTGTCACCCCAGATGACCCAGTCCTTGCTAGAGAATGAGGCCCTTAACCTGAAGAACCAGAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CCA 90 bp | GGTAAGTCGATGCCAGTAGGTTCCTCTGACACAGTACAGTTGAGCTaGAAGATCTGCCCTTCTCCTTCAACCTGCCGCACACAGAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GKSMPVGSSDTVQLS*KICPSPSTCRTQSL Trigger: CAAACTCTGTGTGCGGCAGGTTGAAGGAGAAGGGCAGATCTTCCAGCTCAACTGTACTGTGTCAGAGGAACCTACTGGCATCGACTTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCCCATCAGTGCAGTTCTaGGATTGGAGGACCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KFPVAILPVERLGPIWISPSVQF*DWRTRP Trigger: TGGCCTGGTCCTCCAATCCAAGAACTGCACTGATGG...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCGCCAGTTTAAGACGCTaGGCAGCTGCTTTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KFPVAILPVERLGPIWISASLRR*AAALVV Trigger: CACCACCAAAGCAGCTGCCAAGCGTCTTAAACTGGC...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATTGCCGCACACAGAGTTaGCAAACCAGTTCCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VAILPVERLGPIWISSSDCRTQS*QTSSTV Trigger: CACAGTGGAACTGGTTTGCAAACTCTGTGTGCGGCA...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | CTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGCCTCCAGTCATGGCCTCTaGTTTGAGGGGCATCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LEILVVISVPQVSCCHLASSHGL*FEGHPG Trigger: GCCTGGATGCCCCTCAAACAAGAGGCCATGACTGGA...GGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS TCA 90 bp | CGTCTACTACGTGGTCCTTCTGATGAACCCACTCGCTGTTGCACTTaGAGTAGATCTGGGTGGCAGGGCTGGCTTTACAATACAGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLLRGPSDEPTRCCT*SRSGWQGWLYNTGS Trigger: TGAACCTGTATTGTAAAGCCAGCCCTGCCACCCAGATCTACTTCAAGTGCAACAGCGAGTGGGTTCATCAGAAGGACCACGTAGTAGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS TCA 90 bp | CCAGCGGGAATCAGCAAGCTTACTCCTGAATTAGGAATGATGAGGTaGCCCCCAAGAGAGTTGAAGGTACCAAATGCTGTGCAGGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: PAGISKLTPELGMMR*PPRELKVPNAVQDG Trigger: CCCATCCTGCACAGCATTTGGTACCTTCAACTCTCTTGGGGGTCACCTCATCATTCCTAATTCAGGAGTAAGCTTGCTGATTCCCGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS GCA 90 bp | GACACAGTACAGTTGAGCTGGAAGATCTGCCCTTCTCCTTCAACCTaGCGCACACAGAGTTTGCAAACCAGTTCCACTGTGTTTAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DTVQLSWKICPSPST*RTQSLQTSSTVFRL Trigger: CAGCCTAAACACAGTGGAACTGGTTTGCAAACTCTGTGTGCGGCAGGTTGAAGGAGAAGGGCAGATCTTCCAGCTCAACTGTACTGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS GCA 90 bp | ATGCCAGTAGGTTCCTCTGACACAGTACAGTTGAGCTGGAAGATCTaGCCTTCTCCTTCAACCTGCCGCACACAGAGTTTGCAAACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: MPVGSSDTVQLSWKI*PSPSTCRTQSLQTS Trigger: ACTGGTTTGCAAACTCTGTGTGCGGCAGGTTGAAGGAGAAGGGCAGATCTTCCAGCTCAACTGTACTGTGTCAGAGGAACCTACTGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CCA 90 bp | CCATTGAGTGCTGAGGAGTCAATGATGTCAGACTCAAAGTCACGGTaGTTCTTCCGATACACAAACAGGGCCACCACAACAGTGATCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLSAEESMMSDSKSR*FFRYTNRATTTVIA Trigger: GGCGATCACTGTTGTGGTGGCCCTGTTTGTGTATCGGAAGAACCACCGTGACTTTGAGTCTGACATCATTGACTCCTCAGCACTCAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | CTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTGCCCCATCAGTGCAGTTCTaGGATTGGAGGACCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LEILVVISVPQVSCCHLAPSVQF*DWRTRP Trigger: TGGCCTGGTCCTCCAATCCAAGAACTGCACTGATGG...GGCAAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCATGGGTCAGTCTGTCTaGCGAGGCTCTGGTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KFPVAILPVERLGPIWISMGQSV*RGSGSS Trigger: TGAAGAACCAGAGCCTCGCAAGACAGACTGACCCAT...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTGCACTGCCTGGTTTTaGAGCTGGATCTTCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KFPVAILPVERLGPIWISCTAWF*SWIFQS Trigger: GGACTGGAAGATCCAGCTCAAAAACCAGGCAGTGCA...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTGCAGTGGAGGTTTCTTaGAGAGCCACTCCAGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLAVEVS*RATPDV Trigger: CACATCTGGAGTGGCTCTCAAAGAAACCTCCACTGC...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCGCAGTGGAGGTTTCTTaGAGAGCCACTCCAGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: KFPVAILPVERLGPIWISAVEVS*RATPDV Trigger: CACATCTGGAGTGGCTCTCAAAGAAACCTCCACTGC...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTTGCCGCACACAGAGTTaGCAAACCAGTTCCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLCRTQS*QTSSTV Trigger: CACAGTGGAACTGGTTTGCAAACTCTGTGTGCGGCA...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTGCCGCACACAGAGTTaGCAAACCAGTTCCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KFPVAILPVERLGPIWISCRTQS*QTSSTV Trigger: CACAGTGGAACTGGTTTGCAAACTCTGTGTGCGGCA...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATTCTGACACAGTACAGTaGAGCTGGAAGATCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VAILPVERLGPIWISSSDSDTVQ*SWKICP Trigger: AGGGCAGATCTTCCAGCTCAACTGTACTGTGTCAGA...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AGATGGCACCAGGCACAAATAATTTGTTTTTCTACCCACCCACAGCAAGCAAGGTCCAGTCATGGCCTCTaGTTTGAGGGGCATCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RWHQAQIICFSTHPQQARSSHGL*FEGHPG Trigger: GCCTGGATGCCCCTCAAACAAGAGGCCATGACTGGA...CCTTGCTTGCTGTGGGTGGGTAGAAAAACAAATTATTTGTGCCTGGTGCCATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS GCA 90 bp | ATTAGGAATGATGAGGTGACCCCCAAGAGAGTTGAAGGTACCAAATaGTGTGCAGGATGGGTCAGTCTGTCTTGCGAGGCTCTGGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IRNDEVTPKRVEGTK*CAGWVSLSCEALVL Trigger: AAGAACCAGAGCCTCGCAAGACAGACTGACCCATCCTGCACAGCATTTGGTACCTTCAACTCTCTTGGGGGTCACCTCATCATTCCTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | TTACAAAGAAGGGCAATGAGCGCCAGTGAGTTTCAATGTTTTCCCCAAAGTCACTTGAGTGGGGCTGGGTaGGTGCAGGTTCTTGTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LQRRAMSASEFQCFPQSHLSGAG*VQVLVR Trigger: ACGCACAAGAACCTGCACCAACCCAGCCCCACTCAA...GTGACTTTGGGGAAAACATTGAAACTCACTGGCGCTCATTGCCCTTCTTTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR CAA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTCCACAGGTTGACCATTaGCTCCATGAAGTCCACCTA | + |
|
Preference number: 5 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLPQVDH*LHEVHL Trigger: TAGGTGGACTTCATGGAGCAAATGGTCAACCTGTGG...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | GTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCTCCTCAGATTACTTAGCCAGCAATTaGCTCTTCCAGAGGGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: VAILPVERLGPIWISSSDYLASN*LFQREW Trigger: CCATTCCCTCTGGAAGAGCAAATTGCTGGCTAAGTA...ATCTGAGGAGGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCAGTCATGGCCTCTTGTTaGAGGGGCATCCAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPVMASC*RGIQAA Trigger: AGCAGCCTGGATGCCCCTCAAACAAGAGGCCATGAC...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS TCA 90 bp | GTCATCTGGGGTGACAGTTTGGATGAGAACTCGGCAAGGTCATCCTaGGGAGTGACAGCACCTGAGCTGTTGTACACTTTGATTTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VIWGDSLDENSARSS*GVTAPELLYTLIFK Trigger: CTTGAAAATCAAAGTGTACAACAGCTCAGGTGCTGTCACTCCTCAGGATGACCTTGCCGAGTTCTCATCCAAACTGTCACCCCAGATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | GGTCTTGAGATCTTGGTGGTTATATCTGTCCCCCAAGTTTCCTGTTGCCATCTTAGTGCAGTTCTTGGATaGGAGGACCAGGCCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: GLEILVVISVPQVSCCHLSAVLG*EDQAIT Trigger: TGTGATGGCCTGGTCCTCCAATCCAAGAACTGCACT...AAGATGGCAACAGGAAACTTGGGGGACAGATATAACCACCAAGATCTCAAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | TTACAAAGAAGGGCAATGAGCGCCAGTGAGTTTCAATGTTTTCCCCAAAGTCACGCCAGTTTAAGACGCTaGGCAGCTGCTTTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LQRRAMSASEFQCFPQSHASLRR*AAALVV Trigger: CACCACCAAAGCAGCTGCCAAGCGTCTTAAACTGGC...GTGACTTTGGGGAAAACATTGAAACTCACTGGCGCTCATTGCCCTTCTTTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS-3UTR CAA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCAGCCAGTTTAAGACGCTaGGCAGCTGCTTTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPASLRR*AAALVV Trigger: CACCACCAAAGCAGCTGCCAAGCGTCTTAAACTGGC...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTATAGACAGGCGCAGGTaGTGGATGCTGCCTTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLIDRRR*WMLPLK Trigger: TTTTAAAGGCAGCATCCACAACCTGCGCCTGTCTAT...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTTACTTAGCCAGCAATTaGCTCTTCCAGAGGGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLYLASN*LFQREW Trigger: CCATTCCCTCTGGAAGAGCAAATTGCTGGCTAAGTA...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCTCAGATGTGGTTCCCCTGAACACAGACTCCCTGTGTAATTGTGTCCTTCAACACAGGTATAATTaGCTGTATCTGAGAGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSDVVPLNTDSLCNCVLQHRYN*LYLRVG Trigger: CCCGACTCTCAGATACAGCAAATTATACCTGTGTTG...AAGGACACAATTACACAGGGAGTCTGTGTTCAGGGGAACCACATCTGAGGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCCAACACAGGTATAATTaGCTGTATCTGAGAGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: KFPVAILPVERLGPIWISQHRYN*LYLRVG Trigger: CCCGACTCTCAGATACAGCAAATTATACCTGTGTTG...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCATTGAGTGGGGCTGGGTaGGTGCAGGTTCTTGTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: FRFSTSLIPMPILVQQVSLSGAG*VQVLVR Trigger: ACGCACAAGAACCTGCACCAACCCAGCCCCACTCAA...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCTCCTTACCCCCGTTCTaGGGGGCTGGTGCTGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: NKKRFLGNCKILYHTAYSSLPPF*GAGAVH Trigger: GTGTACAGCACCAGCCCCCAAGAACGGGGGTAAGGA...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTCCTTACCCCCGTTCTaGGGGGCTGGTGCTGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: SIHLDSNKKRFLGNCKILSLPPF*GAGAVH Trigger: GTGTACAGCACCAGCCCCCAAGAACGGGGGTAAGGA...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCATGCACTGCCTGGTTTTaGAGCTGGATCTTCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPCTAWF*SWIFQS Trigger: GGACTGGAAGATCCAGCTCAAAAACCAGGCAGTGCA...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCAGCAGTGGAGGTTTCTTaGAGAGCCACTCCAGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPAVEVS*RATPDV Trigger: CACATCTGGAGTGGCTCTCAAAGAAACCTCCACTGC...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACGTCATGGCCTCTTGTTaGAGGGGCATCCAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TESEGIRQNDSQWNPFSNVMASC*RGIQAA Trigger: AGCAGCCTGGATGCCCCTCAAACAAGAGGCCATGAC...GTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCTTGAGTGGGGCTGGGTaGGTGCAGGTTCTTGTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: NKKRFLGNCKILYHTAYSLSGAG*VQVLVR Trigger: ACGCACAAGAACCTGCACCAACCCAGCCCCACTCAA...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCACCACAGGTTGACCATTaGCTCCATGAAGTCCACCTA | + |
|
Preference number: 5 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPPQVDH*LHEVHL Trigger: TAGGTGGACTTCATGGAGCAAATGGTCAACCTGTGG...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCACCATCAGTGCAGTTCTaGGATTGGAGGACCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FRFSTSLIPMPILVQQVSPSVQF*DWRTRP Trigger: TGGCCTGGTCCTCCAATCCAAGAACTGCACTGATGG...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCACAGCACCTGAGCTGTaGTACACTTTGATTTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KFPVAILPVERLGPIWISTAPEL*YTLIFK Trigger: CTTGAAAATCAAAGTGTACAACAGCTCAGGTGCTGT...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | GTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGGCCAGTTTAAGACGCTaGGCAGCTGCTTTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VYQEVTESEGIRQNDSQWASLRR*AAALVV Trigger: CACCACCAAAGCAGCTGCCAAGCGTCTTAAACTGGC...CCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGGTCATGGCCTCTTGTTaGAGGGGCATCCAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SIHLDSNKKRFLGNCKILVMASC*RGIQAA Trigger: AGCAGCCTGGATGCCCCTCAAACAAGAGGCCATGAC...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCTCCAGTCATGGCCTCTaGTTTGAGGGGCATCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NKKRFLGNCKILYHTAYSSSHGL*FEGHPG Trigger: GCCTGGATGCCCCTCAAACAAGAGGCCATGACTGGA...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | GGGCATAGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCGGTTGGTGCAGGTTCTaGTGCGTTTCTGATATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GHRCFLFNYVSGAAKFSFGWCRF*CVSDIL Trigger: GAGGATATCAGAAACGCACAAGAACCTGCACCAACC...GAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCTATGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTTCCTGTTGCCATCTTGCCTGTAGAGCGCCTTGGTCCTATCTGGATTTCCGAGCTGTTGTACACTTaGATTTTCAAGTTGGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: KFPVAILPVERLGPIWISELLYT*IFKLGS Trigger: ACTACCCAACTTGAAAATCAAAGTGTACAACAGCTC...GGAAATCCAGATAGGACCAAGGCGCTCTACAGGCAAGATGGCAACAGGAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | GTTAGCGTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCATGGGTCAGTCTGTCTaGCGAGGCTCTGGTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSVYQEVTESEGIRQNDSMGQSV*RGSGSS Trigger: TGAAGAACCAGAGCCTCGCAAGACAGACTGACCCAT...GGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACACGCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACATGGGTCAGTCTGTCTaGCGAGGCTCTGGTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TESEGIRQNDSQWNPFSNMGQSV*RGSGSS Trigger: TGAAGAACCAGAGCCTCGCAAGACAGACTGACCCAT...GTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACTGCCGCACACAGAGTTaGCAAACCAGTTCCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TESEGIRQNDSQWNPFSNCRTQS*QTSSTV Trigger: CACAGTGGAACTGGTTTGCAAACTCTGTGTGCGGCA...GTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGATTCTCCACTTCCCTGATACCAATGCCAATACTGGTCCAACAAGTTTCAGGTTGGTGCAGGTTCTaGTGCGTTTCTGATATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FRFSTSLIPMPILVQQVSGWCRF*CVSDIL Trigger: GAGGATATCAGAAACGCACAAGAACCTGCACCAACC...TGAAACTTGTTGGACCAGTATTGGCATTGGTATCAGGGAAGTGGAGAATCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | GTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCGGTTGGTGCAGGTTCTaGTGCGTTTCTGATATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VTESEGIRQNDSQWNPFSGWCRF*CVSDIL Trigger: GAGGATATCAGAAACGCACAAGAACCTGCACCAACC...GCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | GTGTATCAGGAAGTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGCCACAGGTTGACCATTaGCTCCATGAAGTCCACCTA | + |
|
Preference number: 5 (lower is better) Translates to: VYQEVTESEGIRQNDSQWPQVDH*LHEVHL Trigger: TAGGTGGACTTCATGGAGCAAATGGTCAACCTGTGG...CCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTACTTCCTGATACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCAGTGCAGTTCTTGGATaGGAGGACCAGGCCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: NKKRFLGNCKILYHTAYSSAVLG*EDQAIT Trigger: TGTGATGGCCTGGTCCTCCAATCCAAGAACTGCACT...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACCTGAATACTTCTAGCAGTGCAGTTCTTGGATaGGAGGACCAGGCCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: IRQNDSQWNPFSNLNTSSSAVLG*EDQAIT Trigger: TGTGATGGCCTGGTCCTCCAATCCAAGAACTGCACT...GCTAGAAGTATTCAGGTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGAGTGCAGTTCTTGGATaGGAGGACCAGGCCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: SIHLDSNKKRFLGNCKILSAVLG*EDQAIT Trigger: TGTGATGGCCTGGTCCTCCAATCCAAGAACTGCACT...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | GGGCATAGGTGCTTTCTATTTAACTATGTCAGTGGGGCTGCTAAGTTTTCATTCTACTTAGCCAGCAATTaGCTCTTCCAGAGGGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: GHRCFLFNYVSGAAKFSFYLASN*LFQREW Trigger: CCATTCCCTCTGGAAGAGCAAATTGCTGGCTAAGTA...GAATGAAAACTTAGCAGCCCCACTGACATAGTTAAATAGAAAGCACCTATGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | GTAACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCTCTGACACAGTACAGTaGAGCTGGAAGATCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VTESEGIRQNDSQWNPFSSDTVQ*SWKICP Trigger: AGGGCAGATCTTCCAGCTCAACTGTACTGTGTCAGA...GCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCATGGGTCAGTCTGTCTaGCGAGGCTCTGGTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSMGQSV*RGSGSS Trigger: TGAAGAACCAGAGCCTCGCAAGACAGACTGACCCAT...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACATAGACAGGCGCAGGTaGTGGATGCTGCCTTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TESEGIRQNDSQWNPFSNIDRRR*WMLPLK Trigger: TTTTAAAGGCAGCATCCACAACCTGCGCCTGTCTAT...GTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCGCAGTGGAGGTTTCTTaGAGAGCCACTCCAGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSAVEVS*RATPDV Trigger: CACATCTGGAGTGGCTCTCAAAGAAACCTCCACTGC...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCTCTGACACAGTACAGTaGAGCTGGAAGATCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: NKKRFLGNCKILYHTAYSSDTVQ*SWKICP Trigger: AGGGCAGATCTTCCAGCTCAACTGTACTGTGTCAGA...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAATCAGAGGGTATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACCAACACAGGTATAATTaGCTGTATCTGAGAGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: TESEGIRQNDSQWNPFSNQHRYN*LYLRVG Trigger: CCCGACTCTCAGATACAGCAAATTATACCTGTGTTG...GTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAATACCCTCTGATTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCGGTTGGTGCAGGTTCTaGTGCGTTTCTGATATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSGWCRF*CVSDIL Trigger: GAGGATATCAGAAACGCACAAGAACCTGCACCAACC...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | AATGATCTGAACAAAAATAGAACGAGCCATGGACAGTGTCTGCATCCCTGTCCAACTTTGATTTTCAAGTaGGGTAGTGGGTCCAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: NDLNKNRTSHGQCLHPCPTLIFK*GSGSRI Trigger: AATTCTGGACCCACTACCCAACTTGAAAATCAAAGT...TGGACAGGGATGCAGACACTGTCCATGGCTCGTTCTATTTTTGTTCAGATCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCATAGACAGGCGCAGGTaGTGGATGCTGCCTTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: NKKRFLGNCKILYHTAYSIDRRR*WMLPLK Trigger: TTTTAAAGGCAGCATCCACAACCTGCGCCTGTCTAT...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACCTGAATACTTCTAGCTACTTAGCCAGCAATTaGCTCTTCCAGAGGGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: IRQNDSQWNPFSNLNTSSYLASN*LFQREW Trigger: CCATTCCCTCTGGAAGAGCAAATTGCTGGCTAAGTA...GCTAGAAGTATTCAGGTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | TATTACAAACACACATGTGGTACAGAAATGTTTGTGTGGAGGAACATGAATAGCTCTGACACAGTACAGTaGAGCTGGAAGATCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: YYKHTCGTEMFVWRNMNSSDTVQ*SWKICP Trigger: AGGGCAGATCTTCCAGCTCAACTGTACTGTGTCAGA...GCTATTCATGTTCCTCCACACAAACATTTCTGTACCACATGTGTGTTTGTAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGCAACACAGGTATAATTaGCTGTATCTGAGAGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SIHLDSNKKRFLGNCKILQHRYN*LYLRVG Trigger: CCCGACTCTCAGATACAGCAAATTATACCTGTGTTG...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCACAGCACCTGAGCTGTaGTACACTTTGATTTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NKKRFLGNCKILYHTAYSTAPEL*YTLIFK Trigger: CTTGAAAATCAAAGTGTACAACAGCTCAGGTGCTGT...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACCTGAATACTTCTAGCACAGCACCTGAGCTGTaGTACACTTTGATTTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: IRQNDSQWNPFSNLNTSSTAPEL*YTLIFK Trigger: CTTGAAAATCAAAGTGTACAACAGCTCAGGTGCTGT...GCTAGAAGTATTCAGGTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCGTGGTGCTTTTTCTCTaGGCAACAATATTTTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NKKRFLGNCKILYHTAYSVVLFL*ATIFLA Trigger: TGCCAAAAATATTGTTGCCAAGAGAAAAAGCACCAC...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCACTTTGATTTTCAAGTaGGGTAGTGGGTCCAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: NKKRFLGNCKILYHTAYSTLIFK*GSGSRI Trigger: AATTCTGGACCCACTACCCAACTTGAAAATCAAAGT...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGGCAAAATGATTCCCAATGGAATCCATTCAGCAACCTGAATACTTCTAGCACTTTGATTTTCAAGTaGGGTAGTGGGTCCAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: IRQNDSQWNPFSNLNTSSTLIFK*GSGSRI Trigger: AATTCTGGACCCACTACCCAACTTGAAAATCAAAGT...GCTAGAAGTATTCAGGTTGCTGAATGGATTCCATTGGGAATCATTTTGCCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGTACCATACAGCATACAGCGAGCTGTTGTACACTTaGATTTTCAAGTTGGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: NKKRFLGNCKILYHTAYSELLYT*IFKLGS Trigger: ACTACCCAACTTGAAAATCAAAGTGTACAACAGCTC...GCTGTATGCTGTATGGTACAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS-3UTR CAA 90 bp | TCCATACATCTGGATAGCAATAAAAAGCGTTTCCTAGGAAACTGTAAGATCCTGGAGCTGTTGTACACTTaGATTTTCAAGTTGGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SIHLDSNKKRFLGNCKILELLYT*IFKLGS Trigger: ACTACCCAACTTGAAAATCAAAGTGTACAACAGCTC...CAGGATCTTACAGTTTCCTAGGAAACGCTTTTTATTGCTATCCAGATGTATGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 |
||
| CDS CCA 72 bp | CAGGCCATCACAGTCCTTACCCCCGTTCTTGGGGGCTaGTGCTGTACACTCCCTCCTGCGCCAGTGGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QAITVLTPVLGG*CCTLPPAPVGA Trigger: TGCACCCACTGGCGCAGGAGGGAGTGTACAGCACCAGCCCCCAAGAACGGGGGTAAGGACTGTGATGGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CCA 72 bp | GGAGGACCAGGCCATCACAGTCCTTACCCCCGTTCTTaGGGGCTGGTGCTGTACACTCCCTCCTGCGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GGPGHHSPYPRS*GLVLYTPSCAS Trigger: ACTGGCGCAGGAGGGAGTGTACAGCACCAGCCCCCAAGAACGGGGGTAAGGACTGTGATGGCCTGGTCCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CAA 72 bp | TGGAGGACCAGGCCATCACAGTCCTTACCCCCGTTCTaGGGGGCTGGTGCTGTACACTCCCTCCTGCGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WRTRPSQSLPPF*GAGAVHSLLRQ Trigger: CTGGCGCAGGAGGGAGTGTACAGCACCAGCCCCCAAGAACGGGGGTAAGGACTGTGATGGCCTGGTCCTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS GCA 72 bp | GCGCTTAGCAGGGCCAGGGCAGGTAACACAAGCATCTaGAGCAAGTATCCTAGTCCCAGTCCGCAGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALSRARAGNTSI*SKYPSPSPQRA Trigger: GGCCCGCTGCGGACTGGGACTAGGATACTTGCTGCAGATGCTTGTGTTACCTGCCCTGGCCCTGCTAAGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS GCA 72 bp | GCCATCACAGTCCTTACCCCCGTTCTTGGGGGCTGGTaGTGTACACTCCCTCCTGCGCCAGTGGGTGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: AITVLTPVLGGW*CTLPPAPVGAF Trigger: GAATGCACCCACTGGCGCAGGAGGGAGTGTACAGCACCAGCCCCCAAGAACGGGGGTAAGGACTGTGATGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS GCA 72 bp | CTTCTCTCACAATTAGACCTTGAGCGGCGGAGCCGGTaGCACTGGCGCTTAGCAGGGCCAGGGCAGGTAACA | + |
|
Preference number: 6 (lower is better) Translates to: LLSQLDLERRSR*HWRLAGPGQVT Trigger: TGTTACCTGCCCTGGCCCTGCTAAGCGCCAGTGGCACCGGCTCCGCCGCTCAAGGTCTAATTGTGAGAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130636.8 |
||
| CDS CCA 72 bp | TCACAATTAGACCTTGAGCGGCGGAGCCGGTGCCACTaGCGCTTAGCAGGGCCAGGGCAGGTAACACAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SQLDLERRSRCH*RLAGPGQVTQA Trigger: TGCTTGTGTTACCTGCCCTGGCCCTGCTAAGCGCCAGTGGCACCGGCTCCGCCGCTCAAGGTCTAATTGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130636.8 |
||
| CDS CAA 90 bp | TTCTTGGATTGGAGGACCAGGCCATCACAGTCCTTACCCCCGTTCTaGGGGGCTGGTGCTGTACACTCCCTCCTGCGCCAGTGGGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FLDWRTRPSQSLPPF*GAGAVHSLLRQWVH Trigger: ATGCACCCACTGGCGCAGGAGGGAGTGTACAGCACCAGCCCCCAAGAACGGGGGTAAGGACTGTGATGGCCTGGTCCTCCAATCCAAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CCA 72 bp | TTGGGGGCTGGTGCTGTACACTCCCTCCTGCGCCAGTaGGTGCATTCAGTCCCACAGGTTGACCATTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LGAGAVHSLLRQ*VHSVPQVDHLL Trigger: GAGCAAATGGTCAACCTGTGGGACTGAATGCACCCACTGGCGCAGGAGGGAGTGTACAGCACCAGCCCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CAA 72 bp | CAGCAGAGGGGCCCAAAGATGGCCAGTTTAAGACGCTaGGCAGCTGCTTTGGTGGTGGACTGCCCAACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QQRGPKMASLRR*AAALVVDCPTR Trigger: CCTGGTTGGGCAGTCCACCACCAAAGCAGCTGCCAAGCGTCTTAAACTGGCCATCTTTGGGCCCCTCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS GCA 72 bp | GGGCCCAAAGATGGCCAGTTTAAGACGCTTGGCAGCTaGTTTGGTGGTGGACTGCCCAACCAGGGCATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GPKDGQFKTLGS*FGGGLPNQGIG Trigger: ACCTATGCCCTGGTTGGGCAGTCCACCACCAAAGCAGCTGCCAAGCGTCTTAAACTGGCCATCTTTGGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CCA 72 bp | AAAATTCATCATCTTGAGCGGCGGAGCCGGTGCCACTaGCGCTTAGCAGGGCCAGGGCAGGTAACACAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: KIHHLERRSRCH*RLAGPGQVTQA Trigger: TGCTTGTGTTACCTGCCCTGGCCCTGCTAAGCGCCAGTGGCACCGGCTCCGCCGCTCAAGATGATGAATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000142762.2 |
||
| CDS CCA 72 bp | TCCTCCCATTGTCCCTGCACTGCCTGGTTTTTGAGCTaGATCTTCCAGTCCTCGGTGCTGGGGTCTGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SSHCPCTAWFLS*IFQSSVLGSAQ Trigger: CTGTGCAGACCCCAGCACCGAGGACTGGAAGATCCAGCTCAAAAACCAGGCAGTGCAGGGACAATGGGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS TCA 72 bp | AGCGATCACAATCCCCACGTAGAGAGCCACATCATCTaGGTCAGGAGCAGCCTGCATGCACAGCCCATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SDHNPHVESHII*VRSSLHAQPIS Trigger: ACTGATGGGCTGTGCATGCAGGCTGCTCCTGACTCAGATGATGTGGCTCTCTACGTGGGGATTGTGATCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106236.9 |
||
| CDS GCA 72 bp | TCCTGCTCCAAGGACACTTCCTTTCCCAAGGGTTCCTaGTCGAATGTCTTCCGCAGATACGCAATGCGCACG | + |
|
Preference number: 6 (lower is better) Translates to: SCSKDTSFPKGS*SNVFRRYAMRT Trigger: CGTGCGCATTGCGTATCTGCGGAAGACATTCGAGCAGGAACCCTTGGGAAAGGAAGTGTCCTTGGAGCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS GCA 72 bp | TCCTCCCCAACCACCACAACATCCTCCCATTGTCCCTaGACTGCCTGGTTTTTGAGCTGGATCTTCCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPTTTTSSHCP*TAWFLSWIFQS Trigger: GGACTGGAAGATCCAGCTCAAAAACCAGGCAGTGCAGGGACAATGGGAGGATGTTGTGGTGGTTGGGGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CCA 72 bp | ACCTCAGCCACTGGGATCCCTTCAGGTGGCCGACACTaGAGTAAGACTTCCTGCTCCAAGGACACTTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: TSATGIPSGGRH*SKTSCSKDTSF Trigger: AAAGGAAGTGTCCTTGGAGCAGGAAGTCTTACTCCAGTGTCGGCCACCTGAAGGGATCCCAGTGGCTGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
||
| CDS CCA 72 bp | CTTCTGCCGGATAGGGAGAGGAATGCTGAAAGCACTTaGTCCGGTGACAGTGGTGATGGTACTAGCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LLPDRERNAEST*SGDSGDGTSRV Trigger: GACCCTGCTAGTACCATCACCACTGTCACCGGACCAAGTGCTTTCAGCATTCCTCTCCCTATCCGGCAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS TCA 72 bp | AAGCCTCTGCATCCAGCTGAATGTAACAGGGGGTTGTaGAGTTCTCCTCCCCAACCACCACAACATCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: KPLHPAECNRGL*SSPPQPPQHPP Trigger: GGGAGGATGTTGTGGTGGTTGGGGAGGAGAACTTCACAACCCCCTGTTACATTCAGCTGGATGCAGAGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS GCA 72 bp | CATGTCTTCCCATTTCTTCCAGGACGGCTGCCAGCATaGTCAGGTTTCCATCTGGGAAGTTCTGTGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: HVFPFLPGRLPA*SGFHLGSSVLP Trigger: GGGAAGCACAGAACTTCCCAGATGGAAACCTGAGCATGCTGGCAGCCGTCCTGGAAGAAATGGGAAGACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS CCA 72 bp | GCTGTGCAGGATGGGTCAGTCTGTCTTGCGAGGCTCTaGTTCTTCAGGTTAAGGGCCTCATTCTCTAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: AVQDGSVCLARL*FFRLRASFSSK Trigger: CTTGCTAGAGAATGAGGCCCTTAACCTGAAGAACCAGAGCCTCGCAAGACAGACTGACCCATCCTGCACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS TCA 72 bp | CGTGGTCCTTCTGATGAACCCACTCGCTGTTGCACTTaGAGTAGATCTGGGTGGCAGGGCTGGCTTTACAAT | + |
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Preference number: 6 (lower is better) Translates to: RGPSDEPTRCCT*SRSGWQGWLYN Trigger: ATTGTAAAGCCAGCCCTGCCACCCAGATCTACTTCAAGTGCAACAGCGAGTGGGTTCATCAGAAGGACCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| CDS GCA 72 bp | TGCCAGCATGCTCAGGTTTCCATCTGGGAAGTTCTGTaGTTCCCAAAGATCCAGGATTACGCCAGTTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: CQHAQVSIWEVL*FPKIQDYASWA Trigger: AGCCCAACTGGCGTAATCCTGGATCTTTGGGAAGCACAGAACTTCCCAGATGGAAACCTGAGCATGCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS CCA 72 bp | CTCGGGCTCAATGAGGAAGTGTGGCAATGGCTCAGGTaGGTCAGATGGAAAGGTTTCTGGGAGTTCGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: LGLNEEVWQWLR*VRWKGFWEFVK Trigger: TTTCACGAACTCCCAGAAACCTTTCCATCTGACCCACCTGAGCCATTGCCACACTTCCTCATTGAGCCCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000142762.2 |
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| CDS CCA 72 bp | ATGCCAGTAGGTTCCTCTGACACAGTACAGTTGAGCTaGAAGATCTGCCCTTCTCCTTCAACCTGCCGCACA | + |
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Preference number: 6 (lower is better) Translates to: MPVGSSDTVQLS*KICPSPSTCRT Trigger: TGTGCGGCAGGTTGAAGGAGAAGGGCAGATCTTCCAGCTCAACTGTACTGTGTCAGAGGAACCTACTGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS TCA 72 bp | GGTTCTTCCGATACACAAACAGGGCCACCACAACAGTaGTCGCCAGACAGACTGTTACAGCGATCACAATCC | + |
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Preference number: 6 (lower is better) Translates to: GSSDTQTGPPQQ*SPDRLLQRSQS Trigger: GGATTGTGATCGCTGTAACAGTCTGTCTGGCGATCACTGTTGTGGTGGCCCTGTTTGTGTATCGGAAGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS TCA 72 bp | AGGAGATCTTGTCTGGCAGCCTTGATGTTCACAGGCTaGAAGCCGCCATTGAGTGCTGAGGAGTCAATGATG | + |
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Preference number: 6 (lower is better) Translates to: RRSCLAALMFTG*KPPLSAEESMM Trigger: CATCATTGACTCCTCAGCACTCAATGGCGGCTTTCAGCCTGTGAACATCAAGGCTGCCAGACAAGATCTCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS TCA 72 bp | GGTGACAGTTTGGATGAGAACTCGGCAAGGTCATCCTaGGGAGTGACAGCACCTGAGCTGTTGTACACTTTG | + |
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Preference number: 6 (lower is better) Translates to: GDSLDENSARSS*GVTAPELLYTL Trigger: CAAAGTGTACAACAGCTCAGGTGCTGTCACTCCTCAGGATGACCTTGCCGAGTTCTCATCCAAACTGTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS TCA 72 bp | ATAGACAGGCGCAGGTTGTGGATGCTGCCTTTAAAATaGAGAGCCTTGGGTTCTTCTAGGAGCTGTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: IDRRRLWMLPLK*RALGSSRSCPP Trigger: GGGAGGACAGCTCCTAGAAGAACCCAAGGCTCTTCATTTTAAAGGCAGCATCCACAACCTGCGCCTGTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS GCA 72 bp | CAAACAGTTCCTCCACCTGCTGGCGTGAAATCTCAATaGTCACTTCTCTCACAATTAGACCTTGAGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: QTVPPPAGVKSQ*SLLSQLDLERR Trigger: CCGCCGCTCAAGGTCTAATTGTGAGAGAAGTGAGCATTGAGATTTCACGCCAGCAGGTGGAGGAACTGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130636.8 |
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| CDS CCA 72 bp | TTAAGGGCCTCATTCTCTAGCAAGGACTGGGTCATCTaGGGTGACAGTTTGGATGAGAACTCGGCAAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: LRASFSSKDWVI*GDSLDENSARS Trigger: TGACCTTGCCGAGTTCTCATCCAAACTGTCACCCCAGATGACCCAGTCCTTGCTAGAGAATGAGGCCCTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS GCA 72 bp | GGTACTGAGGTTCTCTGTGAGGATATGGCAAGCCTCTaGATCCAGCTGAATGTAACAGGGGGTTGTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: GTEVLCEDMASL*IQLNVTGGCEV Trigger: AACTTCACAACCCCCTGTTACATTCAGCTGGATGCAGAGGCTTGCCATATCCTCACAGAGAACCTCAGTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS CCA 72 bp | GCTGAGGAGTCAATGATGTCAGACTCAAAGTCACGGTaGTTCTTCCGATACACAAACAGGGCCACCACAACA | + |
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Preference number: 6 (lower is better) Translates to: AEESMMSDSKSR*FFRYTNRATTT Trigger: TGTTGTGGTGGCCCTGTTTGTGTATCGGAAGAACCACCGTGACTTTGAGTCTGACATCATTGACTCCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS CCA 72 bp | TTCTTCAGGTTAAGGGCCTCATTCTCTAGCAAGGACTaGGTCATCTGGGGTGACAGTTTGGATGAGAACTCG | + |
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Preference number: 6 (lower is better) Translates to: FFRLRASFSSKD*VIWGDSLDENS Trigger: CGAGTTCTCATCCAAACTGTCACCCCAGATGACCCAGTCCTTGCTAGAGAATGAGGCCCTTAACCTGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS CCA 72 bp | CAGTCACATACATTTCATAGACTCTCCCCTGAGGAATaGCCCCAGCGGGAATCAGCAAGCTTACTCCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: QSHTFHRLSPEE*PQRESASLLLN Trigger: ATTCAGGAGTAAGCTTGCTGATTCCCGCTGGGGCCATTCCTCAGGGGAGAGTCTATGAAATGTATGTGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS TCA 72 bp | AGCGATCACAATCCCCACGTAGAGAGCCACATCATCTaGGTCAGGAGCAGAAGAAAATCCATATTCATTCTG | + |
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Preference number: 6 (lower is better) Translates to: SDHNPHVESHII*VRSRRKSIFIL Trigger: CAGAATGAATATGGATTTTCTTCTGCTCCTGACTCAGATGATGTGGCTCTCTACGTGGGGATTGTGATCGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS TCA 72 bp | ATCAGCAAGCTTACTCCTGAATTAGGAATGATGAGGTaGCCCCCAAGAGAGTTGAAGGTACCAAATGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: ISKLTPELGMMR*PPRELKVPNAV Trigger: CACAGCATTTGGTACCTTCAACTCTCTTGGGGGTCACCTCATCATTCCTAATTCAGGAGTAAGCTTGCTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000130636.8 ENSMUST00000142762.2 |
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| CDS GCA 72 bp | CAAACAGTTCCTCCACCTGCTGGCGTGAAATCTCAATaGTCACTTCTCTCACAATTAGACCAGAGGTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: QTVPPPAGVKSQ*SLLSQLDQRFH Trigger: ATGAAACCTCTGGTCTAATTGTGAGAGAAGTGAGCATTGAGATTTCACGCCAGCAGGTGGAGGAACTGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075282.10 ENSMUST00000106236.9 ENSMUST00000142762.2 |
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