RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UNC5B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020099

Ensembl transcript IDs: ENSMUST00000077925.7, ENSMUST00000218637.2

Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACAGCTGGACCCTCCAAAGCCAGAGGAGGCCACAGAAGGGCACCTaGAGGGGGCTCCGGAGAGGACGAAGGCCACCAGGCCCCAGCTTC +
Preference number: 1 (lower is better)
Translates to: HSWTLQSQRRPQKGT*RGLRRGRRPPGPSF
Trigger: GAAGCTGGGGCCTGGTGGCCTTCGTCCTCTCCGGAGCCCCCTGCAGGTGCCCTTCTGTGGCCTCCTCTGGCTTTGGAGGGTCCAGCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR GCA 90 bp GGTGGTCTGAGGGTTGTGGCGGGGAGGGAGTTGAAGGACCATTCCTaGTGTGAGCCAGGAGTGGTGGAGGCTGGGCACCCCTGTGCAGAG +
Preference number: 1 (lower is better)
Translates to: GGLRVVAGRELKDHS*CEPGVVEAGHPCAE
Trigger: CTCTGCACAGGGGTGCCCAGCCTCCACCACTCCTGGCTCACAGCAGGAATGGTCCTTCAACTCCCTCCCCGCCACAACCCTCAGACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR TCA 90 bp ACACACAGCCATGTCCACACCCCGGCACCTGAGCTCCCACCCACTTaGCCTCTGAGGGTGGGAGGAAGGTGCTGTCTCGGATGCCTGGGA +
Preference number: 1 (lower is better)
Translates to: THSHVHTPAPELPPT*PLRVGGRCCLGCLG
Trigger: TCCCAGGCATCCGAGACAGCACCTTCCTCCCACCCTCAGAGGTCAAGTGGGTGGGAGCTCAGGTGCCGGGGTGTGGACATGGCTGTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR TCA 90 bp ATATCAGAACCCACAGACACACAGCCATGTCCACACCCCGGCACCTaGGCTCCCACCCACTTGACCTCTGAGGGTGGGAGGAAGGTGCTG +
Preference number: 1 (lower is better)
Translates to: ISEPTDTQPCPHPGT*APTHLTSEGGRKVL
Trigger: CAGCACCTTCCTCCCACCCTCAGAGGTCAAGTGGGTGGGAGCTCAGGTGCCGGGGTGTGGACATGGCTGTGTGTCTGTGGGTTCTGATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CCA 90 bp CTCGGGGACAGCAAACAGGCACGCCCACCTCCAGTGGCACAAACCTaGGCACAGAGGTCATGTCCACATGTGGGGATAGGTGTGCGTGTT +
Preference number: 1 (lower is better)
Translates to: LGDSKQARPPPVAQT*AQRSCPHVGIGVRV
Trigger: AACACGCACACCTATCCCCACATGTGGACATGACCTCTGTGCCCAGGTTTGTGCCACTGGAGGTGGGCGTGCCTGTTTGCTGTCCCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR TCA 90 bp GAAACCCAACCCAACAGCCCTGTCTGGCTCAGCTCAGAGTTGGCTTaGCCTTACCTGGGCTGTCTGGTTAGAGCCCTACCCCAGGCTCCA +
Preference number: 1 (lower is better)
Translates to: ETQPNSPVWLSSELA*PYLGCLVRALPQAP
Trigger: TGGAGCCTGGGGTAGGGCTCTAACCAGACAGCCCAGGTAAGGTCAAGCCAACTCTGAGCTGAGCCAGACAGGGCTGTTGGGTTGGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CCA 90 bp TTAGACACAGAGCCACCCAGCCTCACCCAGGGAGAGAGCCCTCCCTaGAACACCCCCTCCCTCTCAGTAAGAGTTTTGGCCATCACGAGA +
Preference number: 1 (lower is better)
Translates to: LDTEPPSLTQGESPP*NTPSLSVRVLAITR
Trigger: TCTCGTGATGGCCAAAACTCTTACTGAGAGGGAGGGGGTGTTCCAGGGAGGGCTCTCTCCCTGGGTGAGGCTGGGTGGCTCTGTGTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR TCA 90 bp TCCACCTTGGCTTCCCCCTTCTATGTGCGGGCTAACAGTGACCAGTaGGAGTATGCCCACAGGGATGAGCATCTTTGGCAGGAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: STLASPFYVRANSDQ*EYAHRDEHLWQEEL
Trigger: CAGCTCCTCCTGCCAAAGATGCTCATCCCTGTGGGCATACTCTCACTGGTCACTGTTAGCCCGCACATAGAAGGGGGAAGCCAAGGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR GCA 90 bp CTGAAGTCACACAGCACAGCTCCACCTTGGCTTCCCCCTTCTATGTaGGGGCTAACAGTGACCAGTGAGAGTATGCCCACAGGGATGAGC +
Preference number: 1 (lower is better)
Translates to: LKSHSTAPPWLPPSM*GLTVTSESMPTGMS
Trigger: GCTCATCCCTGTGGGCATACTCTCACTGGTCACTGTTAGCCCGCACATAGAAGGGGGAAGCCAAGGTGGAGCTGTGCTGTGTGACTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CCA 90 bp GTCACTGCCCGTGGGCTGAAAGGGACAAGAATTCATCCCTTCCACTaGCCCCATGGAACATCCCAGAATGCGCTGTGGTCAAGAGTGGGT +
Preference number: 1 (lower is better)
Translates to: VTARGLKGTRIHPFH*PHGTSQNALWSRVG
Trigger: ACCCACTCTTGACCACAGCGCATTCTGGGATGTTCCATGGGGCCAGTGGAAGGGATGAATTCTTGTCCCTTTCAGCCCACGGGCAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR GCA 90 bp GAAAACCAGGGCAGAGATGCTTGCTGGGTCTGTGGCCATGAAACCTaGCTCCTCACAGAGGCCCCAACTTTCAAAGCTTTCAGGCTGGTC +
Preference number: 1 (lower is better)
Translates to: ENQGRDACWVCGHET*LLTEAPTFKAFRLV
Trigger: GACCAGCCTGAAAGCTTTGAAAGTTGGGGCCTCTGTGAGGAGGCAGGTTTCATGGCCACAGACCCAGCAAGCATCTCTGCCCTGGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR GCA 90 bp GCAGGAGGAGCTGAGGACTACTCTATGAGGCACTGTTCACCTAGATaGCAGGGGCACCTTGGTCTGTCTCAGAGCCCCACTTCAGGAAAA +
Preference number: 1 (lower is better)
Translates to: AGGAEDYSMRHCSPR*QGHLGLSQSPTSGK
Trigger: TTTTCCTGAAGTGGGGCTCTGAGACAGACCAAGGTGCCCCTGGCATCTAGGTGAACAGTGCCTCATAGAGTAGTCCTCAGCTCCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CCA 90 bp CTGAAAGATCCAGGGATAAGAAGGGTCCCTGTCCCTCAAGGGGTATaGCCAGAACTCAGACACCTGGCCCCATTGAGAAGAGCAGAGAGG +
Preference number: 1 (lower is better)
Translates to: LKDPGIRRVPVPQGV*PELRHLAPLRRAER
Trigger: CCTCTCTGCTCTTCTCAATGGGGCCAGGTGTCTGAGTTCTGGCCATACCCCTTGAGGGACAGGGACCCTTCTTATCCCTGGATCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR TCA 90 bp TCTTCCCTCTCTGCTTGTGGACAGGAAAAAGCAGTTTGCCTGAACTaGACTCGACCCGGGATAAGAGAGCGGTCCCTAGCCCAGGACCAT +
Preference number: 1 (lower is better)
Translates to: SSLSACGQEKAVCLN*TRPGIRERSLAQDH
Trigger: ATGGTCCTGGGCTAGGGACCGCTCTCTTATCCCGGGTCGAGTTCAGTTCAGGCAAACTGCTTTTTCCTGTCCACAAGCAGAGAGGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR TCA 90 bp GTAAGAGTTTTGGCCATCACGAGACCAGGAATCACCAAACAGACCTaGACAGTCTCCCAGAACCACAGCTGGACCCTCCAAAGCCAGAGG +
Preference number: 1 (lower is better)
Translates to: VRVLAITRPGITKQT*TVSQNHSWTLQSQR
Trigger: CCTCTGGCTTTGGAGGGTCCAGCTGTGGTTCTGGGAGACTGTTCAGGTCTGTTTGGTGATTCCTGGTCTCGTGATGGCCAAAACTCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR TCA 90 bp ACTTCAGGAAAACCAGGGCAGAGATGCTTGCTGGGTCTGTGGCCATaGAACCTGCCTCCTCACAGAGGCCCCAACTTTCAAAGCTTTCAG +
Preference number: 1 (lower is better)
Translates to: TSGKPGQRCLLGLWP*NLPPHRGPNFQSFQ
Trigger: CTGAAAGCTTTGAAAGTTGGGGCCTCTGTGAGGAGGCAGGTTTCATGGCCACAGACCCAGCAAGCATCTCTGCCCTGGTTTTCCTGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CCA 90 bp GAGAAAGCAGTTATGTGCCTGAAGTCACACAGCACAGCTCCACCTTaGCTTCCCCCTTCTATGTGCGGGCTAACAGTGACCAGTGAGAGT +
Preference number: 1 (lower is better)
Translates to: EKAVMCLKSHSTAPP*LPPSMCGLTVTSES
Trigger: ACTCTCACTGGTCACTGTTAGCCCGCACATAGAAGGGGGAAGCCAAGGTGGAGCTGTGCTGTGTGACTTCAGGCACATAACTGCTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR GCA 90 bp CATCCCAGGATAAAAGGACACTTAAGCCCAGAGAAAGCAGTTATGTaGCTGAAGTCACACAGCACAGCTCCACCTTGGCTTCCCCCTTCT +
Preference number: 1 (lower is better)
Translates to: HPRIKGHLSPEKAVM*LKSHSTAPPWLPPS
Trigger: AGAAGGGGGAAGCCAAGGTGGAGCTGTGCTGTGTGACTTCAGGCACATAACTGCTTTCTCTGGGCTTAAGTGTCCTTTTATCCTGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR GCA 90 bp GACAAGAATTCATCCCTTCCACTGGCCCCATGGAACATCCCAGAATaGGCTGTGGTCAAGAGTGGGTATACAGCTGTCTACTTAGTTACC +
Preference number: 1 (lower is better)
Translates to: DKNSSLPLAPWNIPE*AVVKSGYTAVYLVT
Trigger: GGTAACTAAGTAGACAGCTGTATACCCACTCTTGACCACAGCGCATTCTGGGATGTTCCATGGGGCCAGTGGAAGGGATGAATTCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CCA 90 bp GTTACAAGAGGAATGCTAAAGACTATTTACAAGTTATTTACAGAATaGACGAACAGGGCCGGGACCGTCCCCTGCATATCAGAACCCACA +
Preference number: 1 (lower is better)
Translates to: VTRGMLKTIYKLFTE*TNRAGTVPCISEPT
Trigger: TGTGGGTTCTGATATGCAGGGGACGGTCCCGGCCCTGTTCGTCCATTCTGTAAATAACTTGTAAATAGTCTTTAGCATTCCTCTTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR TCA 90 bp GAGCCACCCAGCCTCACCCAGGGAGAGAGCCCTCCCTGGAACACCCCCTCCCTCGGACCATTCCTGCTGTaGGCCAGGAGTGGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: EPPSLTQGESPPWNTPSLGPFLL*ARSGGG
Trigger: GCCTCCACCACTCCTGGCTCACAGCAGGAATGGTCC...GAGGGAGGGGGTGTTCCAGGGAGGGCTCTCTCCCTGGGTGAGGCTGGGTGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR GCA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAGGCTGGGCACCCCTGTaGAGAGGCTGCCAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGGWAPL*RGCQAS
Trigger: GGAGGCCTGGCAGCCTCTGCACAGGGGTGCCCAGCC...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR-3UTR TCA 90 bp GGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCCTCTGGTGGTGGTGGTCTaGGGGTTGTGGCGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: GGVLSQGKASGFQLSQRPLVVVV*GLWRGG
Trigger: CCCTCCCCGCCACAACCCTCAGACCACCACCACCAG...AGGCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR-3UTR GCA 90 bp CTCAGAGCCCCACTTCAGGAAAACCAGGGCAGAGATGCTTGCTGGGTCTGTGGCGGCTGGGCACCCCTGTaGAGAGGCTGCCAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: LRAPLQENQGRDACWVCGGWAPL*RGCQAS
Trigger: GGAGGCCTGGCAGCCTCTGCACAGGGGTGCCCAGCC...GCCACAGACCCAGCAAGCATCTCTGCCCTGGTTTTCCTGAAGTGGGGCTCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR TCA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAGGACCATTCCTGCTGTaGGCCAGGAGTGGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGGPFLL*ARSGGG
Trigger: GCCTCCACCACTCCTGGCTCACAGCAGGAATGGTCC...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR-3UTR TCA 90 bp CAGGCAGGTTTCCGAGGACGGGCAAAGGAGAGAGCATGCAGACCACAATCAACTCTGGTGGTGGTGGTCTaGGGGTTGTGGCGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: QAGFRGRAKERACRPQSTLVVVV*GLWRGG
Trigger: CCCTCCCCGCCACAACCCTCAGACCACCACCACCAG...AGTTGATTGTGGTCTGCATGCTCTCTCCTTTGCCCGTCCTCGGAAACCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CCA 90 bp GGGAGCCTCAAGATGGGGGACCAGAGAGCCCTGAAAGATCCAGGGATAAGAAGGAGGAGTGGTGGAGGCTaGGCACCCCTGTGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: GSLKMGDQRALKDPGIRRRSGGG*APLCRG
Trigger: GCCTCTGCACAGGGGTGCCCAGCCTCCACCACTCCT...CCTTCTTATCCCTGGATCTTTCAGGGCTCTCTGGTCCCCCATCTTGAGGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CCA 90 bp ACCTCTGAGGGTGGGAGGAAGGTGCTGTCTCGGATGCCTGGGAGCCTCAAGATGCACGCCCACCTCCAGTaGCACAAACCTGGGCACAGA +
Preference number: 2 (lower is better)
Translates to: TSEGGRKVLSRMPGSLKMHAHLQ*HKPGHR
Trigger: TCTGTGCCCAGGTTTGTGCCACTGGAGGTGGGCGTG...CATCTTGAGGCTCCCAGGCATCCGAGACAGCACCTTCCTCCCACCCTCAGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CCA 90 bp CCCCTGCATATCAGAACCCACAGACACACAGCCATGTCCACACCCCGGCACCTGCTTACCTGGGCTGTCTaGTTAGAGCCCTACCCCAGG +
Preference number: 2 (lower is better)
Translates to: PLHIRTHRHTAMSTPRHLLTWAV*LEPYPR
Trigger: CCTGGGGTAGGGCTCTAACCAGACAGCCCAGGTAAG...CAGGTGCCGGGGTGTGGACATGGCTGTGTGTCTGTGGGTTCTGATATGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CAA 90 bp TTGAAACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTaGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: LKPVGPQSHRAEGGV*SQGKASGFQLSQRP
Trigger: AGGCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR-3UTR GCA 90 bp GCACAAACCTGGGCACAGAGGTCATGTCCACATGTGGGGATAGGTGTGCGTGTTCTAGAGGCACAGGGGTaGAGACCGGCTAGTGCCAGC +
Preference number: 2 (lower is better)
Translates to: AQTWAQRSCPHVGIGVRVLEAQG*RPASAS
Trigger: GCTGGCACTAGCCGGTCTGCACCCCTGTGCCTCTAG...AACACGCACACCTATCCCCACATGTGGACATGACCTCTGTGCCCAGGTTTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR GCA 90 bp ACAGGGCCGGGACCGTCCCCTGCATATCAGAACCCACAGACACACAGCCATGTCAAACCAGGGCAGAGATaGTTGCTGGGTCTGTGGCCA +
Preference number: 2 (lower is better)
Translates to: TGPGPSPAYQNPQTHSHVKPGQR*LLGLWP
Trigger: TGGCCACAGACCCAGCAAGCATCTCTGCCCTGGTTT...GACATGGCTGTGTGTCTGTGGGTTCTGATATGCAGGGGACGGTCCCGGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CCA 90 bp CCTTCTATGTGCGGGCTAACAGTGACCAGTGAGAGTATGCCCACAGGGATGAGCGGAGAGAGCCCTCCCTaGAACACCCCCTCCCTCTCA +
Preference number: 2 (lower is better)
Translates to: PSMCGLTVTSESMPTGMSGESPP*NTPSLS
Trigger: TGAGAGGGAGGGGGTGTTCCAGGGAGGGCTCTCTCC...GCTCATCCCTGTGGGCATACTCTCACTGGTCACTGTTAGCCCGCACATAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR GCA 90 bp GACCATGTGAACACAGAATTGAAACCTGTGGGTCCCCAAAGTCACAGGGCTGAGCCCCTGTGCAGAGGCTaGCAGGCCTCCTTGCACCGT +
Preference number: 2 (lower is better)
Translates to: DHVNTELKPVGPQSHRAEPLCRG*QASLHR
Trigger: ACGGTGCAAGGAGGCCTGGCAGCCTCTGCACAGGGG...CTCAGCCCTGTGACTTTGGGGACCCACAGGTTTCAATTCTGTGTTCACATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR-3UTR CCA 90 bp GGGAGCCTCAAGATGGGGGACCAGAGAGCCCTGAAAGATCCAGGGATAAGAAGGCCCAACAGCCCTGTCTaGCTCAGCTCAGAGTTGGCT +
Preference number: 2 (lower is better)
Translates to: GSLKMGDQRALKDPGIRRPNSPV*LSSELA
Trigger: AGCCAACTCTGAGCTGAGCCAGACAGGGCTGTTGGG...CCTTCTTATCCCTGGATCTTTCAGGGCTCTCTGGTCCCCCATCTTGAGGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CCA 90 bp TCTCGGATGCCTGGGAGCCTCAAGATGGGGGACCAGAGAGCCCTGAAAGATCCAATTCATCCCTTCCACTaGCCCCATGGAACATCCCAG +
Preference number: 2 (lower is better)
Translates to: SRMPGSLKMGDQRALKDPIHPFH*PHGTSQ
Trigger: CTGGGATGTTCCATGGGGCCAGTGGAAGGGATGAAT...TGGATCTTTCAGGGCTCTCTGGTCCCCCATCTTGAGGCTCCCAGGCATCCGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR TCA 90 bp AGGCTTCATCTCATTGGAGGCAGGAATGGAAACCCAACCCAACAGCCCTGTCTGCCAAAGTCACAGGGCTaGGGGTGGTGTGTTGTCGCA +
Preference number: 2 (lower is better)
Translates to: RLHLIGGRNGNPTQQPCLPKSQG*GWCVVA
Trigger: TGCGACAACACACCACCCTCAGCCCTGTGACTTTGG...CAGACAGGGCTGTTGGGTTGGGTTTCCATTCCTGCCTCCAATGAGATGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CCA 90 bp AGGCTTCATCTCATTGGAGGCAGGAATGGAAACCCAACCCAACAGCCCTGTCTGTCCCAGAACCACAGCTaGACCCTCCAAAGCCAGAGG +
Preference number: 2 (lower is better)
Translates to: RLHLIGGRNGNPTQQPCLSQNHS*TLQSQR
Trigger: CCTCTGGCTTTGGAGGGTCCAGCTGTGGTTCTGGGA...CAGACAGGGCTGTTGGGTTGGGTTTCCATTCCTGCCTCCAATGAGATGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CCA 90 bp TCTCGGATGCCTGGGAGCCTCAAGATGGGGGACCAGAGAGCCCTGAAAGATCCATCCCAGAATGCGCTGTaGTCAAGAGTGGGTATACAG +
Preference number: 2 (lower is better)
Translates to: SRMPGSLKMGDQRALKDPSQNAL*SRVGIQ
Trigger: CTGTATACCCACTCTTGACCACAGCGCATTCTGGGA...TGGATCTTTCAGGGCTCTCTGGTCCCCCATCTTGAGGCTCCCAGGCATCCGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CCA 90 bp GGTATGGCCAGAACTCAGACACCTGGCCCCATTGAGAAGAGCAGAGAGGCACATCCCTGTCACTGCCCGTaGGCTGAAAGGGACAAGAAT +
Preference number: 2 (lower is better)
Translates to: GMARTQTPGPIEKSREAHPCHCP*AERDKN
Trigger: ATTCTTGTCCCTTTCAGCCCACGGGCAGTGACAGGG...ATGTGCCTCTCTGCTCTTCTCAATGGGGCCAGGTGTCTGAGTTCTGGCCATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CCA 90 bp GTCCCTCAAGGGGTATGGCCAGAACTCAGACACCTGGCCCCATTGAGAAGAGCACATTGGAGGCAGGAATaGAAACCCAACCCAACAGCC +
Preference number: 2 (lower is better)
Translates to: VPQGVWPELRHLAPLRRAHWRQE*KPNPTA
Trigger: GGCTGTTGGGTTGGGTTTCCATTCCTGCCTCCAATG...TGCTCTTCTCAATGGGGCCAGGTGTCTGAGTTCTGGCCATACCCCTTGAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CAA 90 bp CCTGTCCCTCAAGGGGTATGGCCAGAACTCAGACACCTGGCCCCATaGAGAAGAGCAGAGAGGCACATAGGAGATACACCAACTGACTGT +
Preference number: 2 (lower is better)
Translates to: PVPQGVWPELRHLAP*RRAERHIGDTPTDC
Trigger: ACAGTCAGTTGGTGTATCTCCTATGTGCCTCTCTGCTCTTCTCAATGGGGCCAGGTGTCTGAGTTCTGGCCATACCCCTTGAGGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR TCA 90 bp CAGGCAGGTTTCCGAGGACGGGCAAAGGAGAGAGCATGCAGACCACAATCAACTGGGAAACTGAGGCCTTaGCATAGCAAAGCCTTTCCC +
Preference number: 2 (lower is better)
Translates to: QAGFRGRAKERACRPQSTGKLRP*HSKAFP
Trigger: GGGAAAGGCTTTGCTATGTCAAGGCCTCAGTTTCCC...AGTTGATTGTGGTCTGCATGCTCTCTCCTTTGCCCGTCCTCGGAAACCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR TCA 90 bp GTGATCCTAGTCCCTGTCACTGCCCGTGGGCTGAAAGGGACAAGAATTCATCCCCACAGCTGGGGAAACTaGGGCCTTGACATAGCAAAG +
Preference number: 2 (lower is better)
Translates to: VILVPVTARGLKGTRIHPHSWGN*GLDIAK
Trigger: CTTTGCTATGTCAAGGCCTCAGTTTCCCCAGCTGTG...GGGATGAATTCTTGTCCCTTTCAGCCCACGGGCAGTGACAGGGACTAGGATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR GCA 90 bp GCACAAACCTGGGCACAGAGGTCATGTCCACATGTGGGGATAGGTGTGCGTGTTGACTTGCTCACTAAGTaGTCCCTCAGGTCCCAGACA +
Preference number: 2 (lower is better)
Translates to: AQTWAQRSCPHVGIGVRVDLLTK*SLRSQT
Trigger: TGTCTGGGACCTGAGGGAGCACTTAGTGAGCAAGTC...AACACGCACACCTATCCCCACATGTGGACATGACCTCTGTGCCCAGGTTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR TCA 90 bp GTCCCTCAAGGGGTATGGCCAGAACTCAGACACCTGGCCCCATTGAGAAGAGCATGTGCAGTCTCTTATTaGCCACACCCACACACACAT +
Preference number: 2 (lower is better)
Translates to: VPQGVWPELRHLAPLRRACAVSY*PHPHTH
Trigger: ATGTGTGTGTGGGTGTGGTCAATAAGAGACTGCACA...TGCTCTTCTCAATGGGGCCAGGTGTCTGAGTTCTGGCCATACCCCTTGAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR GCA 90 bp ACCTCTGAGGGTGGGAGGAAGGTGCTGTCTCGGATGCCTGGGAGCCTCAAGATGAACTGGGTCTTTCTTTaGCCTTACTGTTTTTGCTCT +
Preference number: 2 (lower is better)
Translates to: TSEGGRKVLSRMPGSLKMNWVFL*PYCFCS
Trigger: AGAGCAAAAACAGTAAGGGCAAAGAAAGACCCAGTT...CATCTTGAGGCTCCCAGGCATCCGAGACAGCACCTTCCTCCCACCCTCAGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR GCA 90 bp GTCCCTCAAGGGGTATGGCCAGAACTCAGACACCTGGCCCCATTGAGAAGAGCAGAGAAAGCAGTTATGTaGCTGAAGTCACACAGCACA +
Preference number: 2 (lower is better)
Translates to: VPQGVWPELRHLAPLRRAEKAVM*LKSHST
Trigger: TGTGCTGTGTGACTTCAGGCACATAACTGCTTTCTC...TGCTCTTCTCAATGGGGCCAGGTGTCTGAGTTCTGGCCATACCCCTTGAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CCA 90 bp TCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTTTGCTCAGGAGTGGTGGAGGCTaGGCACCCCTGTGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: SFAFPKKLGLSLPLLFLLRSGGG*APLCRG
Trigger: GCCTCTGCACAGGGGTGCCCAGCCTCCACCACTCCT...GAGCAAAAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR-3UTR CCA 90 bp CATCCCAGGATAAAAGGACACTTAAGCCCAGAGAAAGCAGTTATGTGCCTGAAGGCAGGGGAAAGCCTCTaGCTTTCAGCTGTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: HPRIKGHLSPEKAVMCLKAGESL*LSAVPE
Trigger: CTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGC...CTTCAGGCACATAACTGCTTTCTCTGGGCTTAAGTGTCCTTTTATCCTGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CCA 90 bp TCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTTTGCTCGCAGGGGAAAGCCTCTaGCTTTCAGCTGTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: SFAFPKKLGLSLPLLFLLAGESL*LSAVPE
Trigger: CTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGC...GAGCAAAAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR TCA 72 bp CCCACAGACACACAGCCATGTCCACACCCCGGCACCTaGGCTCCCACCCACTTGACCTCTGAGGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: PTDTQPCPHPGT*APTHLTSEGGR
Trigger: CCTCCCACCCTCAGAGGTCAAGTGGGTGGGAGCTCAGGTGCCGGGGTGTGGACATGGCTGTGTGTCTGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR GCA 72 bp AGGGTTGTGGCGGGGAGGGAGTTGAAGGACCATTCCTaGTGTGAGCCAGGAGTGGTGGAGGCTGGGCACCCC +
Preference number: 3 (lower is better)
Translates to: RVVAGRELKDHS*CEPGVVEAGHP
Trigger: GGGGTGCCCAGCCTCCACCACTCCTGGCTCACAGCAGGAATGGTCCTTCAACTCCCTCCCCGCCACAACCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR TCA 72 bp CATGTCCACACCCCGGCACCTGAGCTCCCACCCACTTaGCCTCTGAGGGTGGGAGGAAGGTGCTGTCTCGGA +
Preference number: 3 (lower is better)
Translates to: HVHTPAPELPPT*PLRVGGRCCLG
Trigger: TCCGAGACAGCACCTTCCTCCCACCCTCAGAGGTCAAGTGGGTGGGAGCTCAGGTGCCGGGGTGTGGACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CCA 72 bp GAGCCACCCAGCCTCACCCAGGGAGAGAGCCCTCCCTaGAACACCCCCTCCCTCTCAGTAAGAGTTTTGGCC +
Preference number: 3 (lower is better)
Translates to: EPPSLTQGESPP*NTPSLSVRVLA
Trigger: GGCCAAAACTCTTACTGAGAGGGAGGGGGTGTTCCAGGGAGGGCTCTCTCCCTGGGTGAGGCTGGGTGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CCA 72 bp GACTCGGGGACAGCAAACAGGCACGCCCACCTCCAGTaGCACAAACCTGGGCACAGAGGTCATGTCCACATG +
Preference number: 3 (lower is better)
Translates to: DSGTANRHAHLQ*HKPGHRGHVHM
Trigger: CATGTGGACATGACCTCTGTGCCCAGGTTTGTGCCACTGGAGGTGGGCGTGCCTGTTTGCTGTCCCCGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CAA 90 bp ACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTGTGGCGGGGAGGGAGTaGAAGGACCATTCCTGCTGT +
Preference number: 3 (lower is better)
Translates to: TGLRVVCCRRGKPLAFSCVAGRE*KDHSCC
Trigger: ACAGCAGGAATGGTCCTTCAACTCCCTCCCCGCCAC...ACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCTCAGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR-3UTR CAA 90 bp ACAGGGCCGGGACCGTCCCCTGCATATCAGAACCCACAGACACACAGCCATGTCAGACACCTGGCCCCATaGAGAAGAGCAGAGAGGCAC +
Preference number: 3 (lower is better)
Translates to: TGPGPSPAYQNPQTHSHVRHLAP*RRAERH
Trigger: GTGCCTCTCTGCTCTTCTCAATGGGGCCAGGTGTCT...GACATGGCTGTGTGTCTGTGGGTTCTGATATGCAGGGGACGGTCCCGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR TCA 72 bp CCCAACAGCCCTGTCTGGCTCAGCTCAGAGTTGGCTTaGCCTTACCTGGGCTGTCTGGTTAGAGCCCTACCC +
Preference number: 3 (lower is better)
Translates to: PNSPVWLSSELA*PYLGCLVRALP
Trigger: GGGTAGGGCTCTAACCAGACAGCCCAGGTAAGGTCAAGCCAACTCTGAGCTGAGCCAGACAGGGCTGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CCA 72 bp CCCAACCCAACAGCCCTGTCTGGCTCAGCTCAGAGTTaGCTTGACCTTACCTGGGCTGTCTGGTTAGAGCCC +
Preference number: 3 (lower is better)
Translates to: PNPTALSGSAQS*LDLTWAVWLEP
Trigger: GGGCTCTAACCAGACAGCCCAGGTAAGGTCAAGCCAACTCTGAGCTGAGCCAGACAGGGCTGTTGGGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CAA 90 bp ATCAACTTGTCTCTACTCGATTCTCAGAGAAGCGTGGGAACCCAAGGGGCCTCGGATGCCAGGGGCACCTaGGTCTGTCTCAGAGCCCCA +
Preference number: 3 (lower is better)
Translates to: INLSLLDSQRSVGTQGASDARGT*VCLRAP
Trigger: TGGGGCTCTGAGACAGACCAAGGTGCCCCTGGCATC...CGAGGCCCCTTGGGTTCCCACGCTTCTCTGAGAATCGAGTAGAGACAAGTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CAA 90 bp ACAGGGCCGGGACCGTCCCCTGCATATCAGAACCCACAGACACACAGCCATGTCAGAGGCTTCATCTCATaGGAGGCAGGAATGGAAACC +
Preference number: 3 (lower is better)
Translates to: TGPGPSPAYQNPQTHSHVRGFIS*EAGMET
Trigger: GGTTTCCATTCCTGCCTCCAATGAGATGAAGCCTCT...GACATGGCTGTGTGTCTGTGGGTTCTGATATGCAGGGGACGGTCCCGGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR GCA 72 bp AGAGCCCCACTTCAGGAAAACCAGGGCAGAGATGCTTaGTGGGTCTGTGGCCATGAAACCTGCCTCCTCACA +
Preference number: 3 (lower is better)
Translates to: RAPLQENQGRDA*WVCGHETCLLT
Trigger: TGTGAGGAGGCAGGTTTCATGGCCACAGACCCAGCAAGCATCTCTGCCCTGGTTTTCCTGAAGTGGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR GCA 72 bp CACAGCACAGCTCCACCTTGGCTTCCCCCTTCTATGTaGGGGCTAACAGTGACCAGTGAGAGTATGCCCACA +
Preference number: 3 (lower is better)
Translates to: HSTAPPWLPPSM*GLTVTSESMPT
Trigger: TGTGGGCATACTCTCACTGGTCACTGTTAGCCCGCACATAGAAGGGGGAAGCCAAGGTGGAGCTGTGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CCA 72 bp CCAGGGATAAGAAGGGTCCCTGTCCCTCAAGGGGTATaGCCAGAACTCAGACACCTGGCCCCATTGAGAAGA +
Preference number: 3 (lower is better)
Translates to: PGIRRVPVPQGV*PELRHLAPLRR
Trigger: TCTTCTCAATGGGGCCAGGTGTCTGAGTTCTGGCCATACCCCTTGAGGGACAGGGACCCTTCTTATCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR TCA 72 bp AAACCAGGGCAGAGATGCTTGCTGGGTCTGTGGCCATaGAACCTGCCTCCTCACAGAGGCCCCAACTTTCAA +
Preference number: 3 (lower is better)
Translates to: KPGQRCLLGLWP*NLPPHRGPNFQ
Trigger: TTGAAAGTTGGGGCCTCTGTGAGGAGGCAGGTTTCATGGCCACAGACCCAGCAAGCATCTCTGCCCTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR TCA 72 bp GAGCATCTTTGGCAGGAGGAGCTGAGGACTACTCTATaGGGCACTGTTCACCTAGATGCCAGGGGCACCTTG +
Preference number: 3 (lower is better)
Translates to: EHLWQEELRTTL*GTVHLDARGTL
Trigger: CAAGGTGCCCCTGGCATCTAGGTGAACAGTGCCTCATAGAGTAGTCCTCAGCTCCTCCTGCCAAAGATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR TCA 72 bp GCTTCCCCCTTCTATGTGCGGGCTAACAGTGACCAGTaGGAGTATGCCCACAGGGATGAGCATCTTTGGCAG +
Preference number: 3 (lower is better)
Translates to: ASPFYVRANSDQ*EYAHRDEHLWQ
Trigger: CTGCCAAAGATGCTCATCCCTGTGGGCATACTCTCACTGGTCACTGTTAGCCCGCACATAGAAGGGGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR GCA 72 bp TTTACAGAATGGACGAACAGGGCCGGGACCGTCCCCTaGATATCAGAACCCACAGACACACAGCCATGTCCA +
Preference number: 3 (lower is better)
Translates to: FTEWTNRAGTVP*ISEPTDTQPCP
Trigger: TGGACATGGCTGTGTGTCTGTGGGTTCTGATATGCAGGGGACGGTCCCGGCCCTGTTCGTCCATTCTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CCA 72 bp TGGCTAGGAATGGGAAGGGGAGAGGCTTCATCTCATTaGAGGCAGGAATGGAAACCCAACCCAACAGCCCTG +
Preference number: 3 (lower is better)
Translates to: WLGMGRGEASSH*RQEWKPNPTAL
Trigger: CAGGGCTGTTGGGTTGGGTTTCCATTCCTGCCTCCAATGAGATGAAGCCTCTCCCCTTCCCATTCCTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CCA 72 bp CACAGAAATACCCTGCAGGACCCAGCAACGCCAAGCTaGCTAGGAATGGGAAGGGGAGAGGCTTCATCTCAT +
Preference number: 3 (lower is better)
Translates to: HRNTLQDPATPS*LGMGRGEASSH
Trigger: ATGAGATGAAGCCTCTCCCCTTCCCATTCCTAGCCAGCTTGGCGTTGCTGGGTCCTGCAGGGTATTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR TCA 72 bp TCTGCTTGTGGACAGGAAAAAGCAGTTTGCCTGAACTaGACTCGACCCGGGATAAGAGAGCGGTCCCTAGCC +
Preference number: 3 (lower is better)
Translates to: SACGQEKAVCLN*TRPGIRERSLA
Trigger: GGCTAGGGACCGCTCTCTTATCCCGGGTCGAGTTCAGTTCAGGCAAACTGCTTTTTCCTGTCCACAAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR TCA 72 bp TTGGCCATCACGAGACCAGGAATCACCAAACAGACCTaGACAGTCTCCCAGAACCACAGCTGGACCCTCCAA +
Preference number: 3 (lower is better)
Translates to: LAITRPGITKQT*TVSQNHSWTLQ
Trigger: TTGGAGGGTCCAGCTGTGGTTCTGGGAGACTGTTCAGGTCTGTTTGGTGATTCCTGGTCTCGTGATGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR GCA 72 bp TCATCCCTTCCACTGGCCCCATGGAACATCCCAGAATaGGCTGTGGTCAAGAGTGGGTATACAGCTGTCTAC +
Preference number: 3 (lower is better)
Translates to: SSLPLAPWNIPE*AVVKSGYTAVY
Trigger: GTAGACAGCTGTATACCCACTCTTGACCACAGCGCATTCTGGGATGTTCCATGGGGCCAGTGGAAGGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CCA 72 bp GCTGAGCACCTTCTAAGTAAGAGTCGGACTGTAAGCTaGGACTTGCTCACTAAGTGCTCCCTCAGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: AEHLLSKSRTVS*DLLTKCSLRSQ
Trigger: CTGGGACCTGAGGGAGCACTTAGTGAGCAAGTCCCAGCTTACAGTCCGACTCTTACTTAGAAGGTGCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CAA 90 bp ACAGGGCCGGGACCGTCCCCTGCATATCAGAACCCACAGACACACAGCCATGTCAAACTGGGTCTTTCTTaGCCCTTACTGTTTTTGCTC +
Preference number: 3 (lower is better)
Translates to: TGPGPSPAYQNPQTHSHVKLGLS*PLLFLL
Trigger: GAGCAAAAACAGTAAGGGCAAAGAAAGACCCAGTTT...GACATGGCTGTGTGTCTGTGGGTTCTGATATGCAGGGGACGGTCCCGGCCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR GCA 72 bp CAGGCAGGTTTCCGAGGACGGGCAAAGGAGAGAGCATaGAGACCACAATCAACTTGTCTCTACTCGATTCTC +
Preference number: 3 (lower is better)
Translates to: QAGFRGRAKERA*RPQSTCLYSIL
Trigger: GAGAATCGAGTAGAGACAAGTTGATTGTGGTCTGCATGCTCTCTCCTTTGCCCGTCCTCGGAAACCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR TCA 72 bp TTTCTTTGCCCTTACTGTTTTTGCTCTCTCACTACCTaGGTCTCGCTGACTTCTGAGGCTCATCCCCCACCC +
Preference number: 3 (lower is better)
Translates to: FLCPYCFCSLTT*VSLTSEAHPPP
Trigger: GGGTGGGGGATGAGCCTCAGAAGTCAGCGAGACTCAGGTAGTGAGAGAGCAAAAACAGTAAGGGCAAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR CCA 72 bp ATCAATACCAGTGATCCTAGTCCCTGTCACTGCCCGTaGGCTGAAAGGGACAAGAATTCATCCCTTCCACTG +
Preference number: 3 (lower is better)
Translates to: INTSDPSPCHCP*AERDKNSSLPL
Trigger: CAGTGGAAGGGATGAATTCTTGTCCCTTTCAGCCCACGGGCAGTGACAGGGACTAGGATCACTGGTATTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CAA 90 bp TCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTTTGCTCGTGGCGGGGAGGGAGTaGAAGGACCATTCCTGCTGT +
Preference number: 3 (lower is better)
Translates to: SFAFPKKLGLSLPLLFLLVAGRE*KDHSCC
Trigger: ACAGCAGGAATGGTCCTTCAACTCCCTCCCCGCCAC...GAGCAAAAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR-3UTR CAA 90 bp CTGGATAATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTAGGCTGCCAGGCCTCCTaGCACCGTCTCCTACTGATC +
Preference number: 3 (lower is better)
Translates to: LDNKSFAFPKKLGLSLPLGCQAS*HRLLLI
Trigger: GATCAGTAGGAGACGGTGCAAGGAGGCCTGGCAGCC...TAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATTATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR-3UTR CAA 90 bp AGGCTTCATCTCATTGGAGGCAGGAATGGAAACCCAACCCAACAGCCCTGTCTGTGGATAATAAATCATTaGCGTTCCCTAAGAAACTGG +
Preference number: 3 (lower is better)
Translates to: RLHLIGGRNGNPTQQPCLWIINH*RSLRNW
Trigger: CCAGTTTCTTAGGGAACGCAAATGATTTATTATCCA...CAGACAGGGCTGTTGGGTTGGGTTTCCATTCCTGCCTCCAATGAGATGAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CCA 72 bp GGAATGCTAAAGACTATTTACAAGTTATTTACAGAATaGACGAACAGGGCCGGGACCGTCCCCTGCATATCA +
Preference number: 3 (lower is better)
Translates to: GMLKTIYKLFTE*TNRAGTVPCIS
Trigger: TGATATGCAGGGGACGGTCCCGGCCCTGTTCGTCCATTCTGTAAATAACTTGTAAATAGTCTTTAGCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR-3UTR CAA 90 bp AATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTATCTTCCCTCTCTGCTaGTGGACAGGAAAAAGCAGT +
Preference number: 3 (lower is better)
Translates to: NKSFAFPKKLGLSLPLLFIFPLC*WTGKSS
Trigger: ACTGCTTTTTCCTGTCCACAAGCAGAGAGGGAAGAT...AAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp TGCAGAGGCTGCCAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGCGTTGCCCCGGGAGTTaGGGGCGTCCAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CRGCQASLHRLLLIPTGLRCPGS*GRPGCC
Trigger: GCAGCAGCCTGGACGCCCCCAACTCCCGGGGCAACG...CAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTGGCAGCCTCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp CAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGTGGTCACAGGCAGTCCCAGCTGGGTGGTaGTGGCATTGCCCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QASLHRLLLIPTGLWSQAVPAGW*WHCPGQ
Trigger: CTGCCCCGGGCAATGCCATCACCACCCAGCTGGGAC...TGCCTGTGACCACAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp CAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGTGGTCACAGGCAGTTCTGGGGTGGCGGTaGCATGCACTCGCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: QASLHRLLLIPTGLWSQAVLGWR*HALAAA
Trigger: CGCAGCCGCGAGTGCATGGCACCGCCACCCCAGAAC...TGCCTGTGACCACAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp GTGCAGAGGCTGCCAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTCCGCAGAGGAGTCGGTaGTGTCCGTGTCGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: VQRLPGLLAPSPTDPHRPPQRSR*CPCRSP
Trigger: GGGACTTCGACACGGACATCACCGACTCCTCTGCGG...AGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTGGCAGCCTCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp CAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGTGGTCACAGGCATTGGTACCAACAGGCTaGCCCCTGTGCCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QASLHRLLLIPTGLWSQALVPTG*PLCRGG
Trigger: GCCTCCCCGGCACAGGGGTCAGCCTGTTGGTACCAA...TGCCTGTGACCACAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp GTGCAGAGGCTGCCAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTCCAGCTGGAGCCGCTTaGCTGCAGAGCGAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: VQRLPGLLAPSPTDPHRPPAGAA*LQSESR
Trigger: CCTACTCTCGCTCTGCAGTCAAGCGGCTCCAGCTGG...AGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTGGCAGCCTCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp CTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGGTTCTGGGGTGGCGGTaGCATGCACTCGCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LWVPKVTGLRVVCCRRGKVLGWR*HALAAA
Trigger: CGCAGCCGCGAGTGCATGGCACCGCCACCCCAGAAC...CTTTCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp ACAGGGCCGGGACCGTCCCCTGCATATCAGAACCCACAGACACACAGCCATGTCGGAGGGGCGGACGGGTaGAGGAGCTGCGGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: TGPGPSPAYQNPQTHSHVGGADG*RSCGLL
Trigger: CAACAACCCGCAGCTCCTGCACCCGTCCGCCCCTCC...GACATGGCTGTGTGTCTGTGGGTTCTGATATGCAGGGGACGGTCCCGGCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR GCA 90 bp GTGCAGAGGCTGCCAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGGTAGGCCCAGGAGGTaGTGGGAACCAAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VQRLPGLLAPSPTDPHRPGRPRR*WEPRLA
Trigger: TGCCAGCCTTGGTTCCCAGCACCTCCTGGGCCTACC...AGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTGGCAGCCTCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp CAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGTGGTCACAGGCAAACCAAAGGTGCCGCTaGCACTGCTGCTGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QASLHRLLLIPTGLWSQANQRCR*HCCWGP
Trigger: GGGACCCCAGCAGCAGTGTCAGCGGCACCTTTGGTT...TGCCTGTGACCACAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp CAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGTGGTCACAGGCACGCAGACCTTACAGGTaGACTCCGTGGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QASLHRLLLIPTGLWSQARRPYR*TPWRPG
Trigger: GCCTGGCCTCCACGGAGTTCACCTGTAAGGTCTGCG...TGCCTGTGACCACAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp CTCAGAGCCCCACTTCAGGAAAACCAGGGCAGAGATGCTTGCTGGGTCTGTGGCGTCCCAGCTGGGTGGTaGTGGCATTGCCCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LRAPLQENQGRDACWVCGVPAGW*WHCPGQ
Trigger: CTGCCCCGGGCAATGCCATCACCACCCAGCTGGGAC...GCCACAGACCCAGCAAGCATCTCTGCCCTGGTTTTCCTGAAGTGGGGCTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR GCA 90 bp GGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCCTCCATGCACTCGCGGCTaGGCCAGTGCGCACACTCTG +
Preference number: 4 (lower is better)
Translates to: GGVLSQGKASGFQLSQRPPCTRG*ASAHTL
Trigger: CAGAGTGTGCGCACTGGCGCAGCCGCGAGTGCATGG...AGGCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp TGCAGAGGCTGCCAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGCAAGTAGCGTCCCGCTaGAGTCACGGCCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: CRGCQASLHRLLLIPTGLQVASR*SHGLRS
Trigger: AGAACGGAGGCCGTGACTGCAGCGGGACGCTACTTG...CAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTGGCAGCCTCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp TGCAGAGGCTGCCAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGGGCCACCACAAGGCCTaGGTACAGTGCCACATCTCC +
Preference number: 4 (lower is better)
Translates to: CRGCQASLHRLLLIPTGLGHHKA*VQCHIS
Trigger: GGAGATGTGGCACTGTACGCAGGCCTTGTGGTGGCC...CAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTGGCAGCCTCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp CAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGTGGTCACAGGCACTGGCACTGCGCAGGTaGAGGAAATGGGTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: QASLHRLLLIPTGLWSQALALRR*RKWVSR
Trigger: CCGGGACACCCATTTCCTGCACCTGCGCAGTGCCAG...TGCCTGTGACCACAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp AGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCACAGCCTCCAGTCGTTaGCCCGGGAGTTGGGGGCGT +
Preference number: 4 (lower is better)
Translates to: RVVCCRRGKPLAFSCPRGTASSR*PGSWGR
Trigger: ACGCCCCCAACTCCCGGGGCAACGACTGGAGGCTGT...GCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp CAAAGCCAGAGGAGGCCACAGAAGGGCACCTGCAGGGGGCTCCGGAGAGGACGAGCATGGGGGATGTCATaGAGGGAGAGGCGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: QSQRRPQKGTCRGLRRGRAWGMS*RERRRL
Trigger: CAACCTACGCCTCTCCCTCCATGACATCCCCCATGC...TCGTCCTCTCCGGAGCCCCCTGCAGGTGCCCTTCTGTGGCCTCCTCTGGCTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp ACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTGTAGTTGGCCGTGTCTaGGAGGCGCGCCTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: TGLRVVCCRRGKPLAFSCVVGRV*EARLAD
Trigger: ATCCGCCAGGCGCGCCTCTCAGACACGGCCAACTAC...ACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCTCAGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp CAGAAATACCCTGCAGGACCCAGCAACGCCAAGCTGGCTAGGAATGGGAAGGGGTTGGTACCAACAGGCTaGCCCCTGTGCCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QKYPAGPSNAKLARNGKGLVPTG*PLCRGG
Trigger: GCCTCCCCGGCACAGGGGTCAGCCTGTTGGTACCAA...CCCCTTCCCATTCCTAGCCAGCTTGGCGTTGCTGGGTCCTGCAGGGTATTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR GCA 90 bp CAAAGCCAGAGGAGGCCACAGAAGGGCACCTGCAGGGGGCTCCGGAGAGGACGAGGGAAGGCTCTGCAGTaGAGTTCCACTGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QSQRRPQKGTCRGLRRGRGKALQ*SSTGLF
Trigger: GAACAAGCCAGTGGAACTGCACTGCAGAGCCTTCCC...TCGTCCTCTCCGGAGCCCCCTGCAGGTGCCCTTCTGTGGCCTCCTCTGGCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR GCA 90 bp GTCCCCTGCATATCAGAACCCACAGACACACAGCCATGTCCACACCCCGGCACCGTCCGAGTACGCTTCTaGCAGCCTCGGCCACAGCGA +
Preference number: 4 (lower is better)
Translates to: VPCISEPTDTQPCPHPGTVRVRF*QPRPQR
Trigger: TCGCTGTGGCCGAGGCTGGCAGAAGCGTACTCGGAC...GGTGCCGGGGTGTGGACATGGCTGTGTGTCTGTGGGTTCTGATATGCAGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR GCA 90 bp GAGCCACCCAGCCTCACCCAGGGAGAGAGCCCTCCCTGGAACACCCCCTCCCTCCGCACAGCCCATCAGTaGAGTTCTTGGAGTCAAGTA +
Preference number: 4 (lower is better)
Translates to: EPPSLTQGESPPWNTPSLRTAHQ*SSWSQV
Trigger: TACTTGACTCCAAGAACTGCACTGATGGGCTGTGCG...GAGGGAGGGGGTGTTCCAGGGAGGGCTCTCTCCCTGGGTGAGGCTGGGTGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp CAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGTGGTCACAGGCACCACACAGGTGTAGTTaGCCGTGTCTGAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: QASLHRLLLIPTGLWSQAPHRCS*PCLRGA
Trigger: CGCGCCTCTCAGACACGGCCAACTACACCTGTGTGG...TGCCTGTGACCACAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp TCTCGGATGCCTGGGAGCCTCAAGATGGGGGACCAGAGAGCCCTGAAAGATCCATCACGGCCTCCGTTCTaGGGTGGCGGTGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: SRMPGSLKMGDQRALKDPSRPPF*GGGAMH
Trigger: GTGCATGGCACCGCCACCCCAGAACGGAGGCCGTGA...TGGATCTTTCAGGGCTCTCTGGTCCCCCATCTTGAGGCTCCCAGGCATCCGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp GGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCCTACAGGAGTAGGCCTGTaGGCCCACAGGTCACCGAGG +
Preference number: 4 (lower is better)
Translates to: GGVLSQGKASGFQLSQRPTGVGL*AHRSPR
Trigger: CCTCGGTGACCTGTGGGCCCACAGGCCTACTCCTGT...AGGCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GTGCAGAGGCTGCCAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTTGGTCCAGCAGGATGTaGCAGGACTTAGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VQRLPGLLAPSPTDPHRPWSSRM*QDLASS
Trigger: GCTGGAGGCTAAGTCCTGCCACATCCTGCTGGACCA...AGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTGGCAGCCTCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GCACAAACCTGGGCACAGAGGTCATGTCCACATGTGGGGATAGGTGTGCGTGTTCGTTGCCCCGGGAGTTaGGGGCGTCCAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AQTWAQRSCPHVGIGVRVRCPGS*GRPGCC
Trigger: GCAGCAGCCTGGACGCCCCCAACTCCCGGGGCAACG...AACACGCACACCTATCCCCACATGTGGACATGACCTCTGTGCCCAGGTTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGACTCCACTTGCTGCCGTaGCACCTCGATCTGCACCTC +
Preference number: 4 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGLHLLP*HLDLHL
Trigger: GAGGTGCAGATCGAGGTGTCACGGCAGCAAGTGGAG...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp ACCTCTGAGGGTGGGAGGAAGGTGCTGTCTCGGATGCCTGGGAGCCTCAAGATGGCGATTGGAACAGGGTaGCCACTCTGCCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TSEGGRKVLSRMPGSLKMAIGTG*PLCPAG
Trigger: TCCAGCTGGGCAGAGTGGTCACCCTGTTCCAATCGC...CATCTTGAGGCTCCCAGGCATCCGAGACAGCACCTTCCTCCCACCCTCAGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp AGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCGCGATTGGAACAGGGTaGCCACTCTGCCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RVVCCRRGKPLAFSCPRGAIGTG*PLCPAG
Trigger: TCCAGCTGGGCAGAGTGGTCACCCTGTTCCAATCGC...GCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp CAGGCAGGTTTCCGAGGACGGGCAAAGGAGAGAGCATGCAGACCACAATCAACTCACAGTGGGGCACGGTaGGGACGACAGGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: QAGFRGRAKERACRPQSTHSGAR*GRQGGT
Trigger: TGTGCCGCCCTGTCGTCCTCACCGTGCCCCACTGTG...AGTTGATTGTGGTCTGCATGCTCTCTCCTTTGCCCGTCCTCGGAAACCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp ACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCGCAGACCTTACAGGTaGACTCCGTGGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TGLRVVCCRRGKPLAFSCRRPYR*TPWRPG
Trigger: GCCTGGCCTCCACGGAGTTCACCTGTAAGGTCTGCG...ACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCTCAGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp GGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCCTCGTGACACCTCGATCTaGACCTCTCGCACCCGCAAG +
Preference number: 4 (lower is better)
Translates to: GGVLSQGKASGFQLSQRPRDTSI*TSRTRK
Trigger: CTTGCGGGTGCGAGAGGTGCAGATCGAGGTGTCACG...AGGCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp CTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGGGCCACCACAAGGCCTaGGTACAGTGCCACATCTCC +
Preference number: 4 (lower is better)
Translates to: LWVPKVTGLRVVCCRRGKGHHKA*VQCHIS
Trigger: GGAGATGTGGCACTGTACGCAGGCCTTGTGGTGGCC...CTTTCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp ACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCTGGCACTGCGCAGGTaGAGGAAATGGGTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: TGLRVVCCRRGKPLAFSCLALRR*RKWVSR
Trigger: CCGGGACACCCATTTCCTGCACCTGCGCAGTGCCAG...ACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCTCAGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp CTCAGAGCCCCACTTCAGGAAAACCAGGGCAGAGATGCTTGCTGGGTCTGTGGCGCACCCGCAAGCCTGTaGCCTCATCCAGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LRAPLQENQGRDACWVCGAPASL*PHPGSP
Trigger: AGGAGAGCCTGGATGAGGCCACAGGCTTGCGGGTGC...GCCACAGACCCAGCAAGCATCTCTGCCCTGGTTTTCCTGAAGTGGGGCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp ACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTGCACCCGCAAGCCTGTaGCCTCATCCAGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TGLRVVCCRRGKPLAFSCAPASL*PHPGSP
Trigger: AGGAGAGCCTGGATGAGGCCACAGGCTTGCGGGTGC...ACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCTCAGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp AGGGTTGTGGCGGGGAGGGAGTTGAAGGACCATTCCTGCTGTGAGCCAGGAGTGTCTGAGAGGCGCGCCTaGCGGATGATGAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: RVVAGRELKDHSCCEPGVSERRA*RMMRLW
Trigger: CCACAACCTCATCATCCGCCAGGCGCGCCTCTCAGA...CACTCCTGGCTCACAGCAGGAATGGTCCTTCAACTCCCTCCCCGCCACAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp CAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGTGGTCACAGGCACTCGGCCACAGCGATTaGAACAGGGTGACCACTCTG +
Preference number: 4 (lower is better)
Translates to: QASLHRLLLIPTGLWSQALGHSD*NRVTTL
Trigger: CAGAGTGGTCACCCTGTTCCAATCGCTGTGGCCGAG...TGCCTGTGACCACAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp CAGAAATACCCTGCAGGACCCAGCAACGCCAAGCTGGCTAGGAATGGGAAGGGGGCTGGGAACCAAGGCTaGCACTGCGCAGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: QKYPAGPSNAKLARNGKGAGNQG*HCAGAG
Trigger: TCCTGCACCTGCGCAGTGCCAGCCTTGGTTCCCAGC...CCCCTTCCCATTCCTAGCCAGCTTGGCGTTGCTGGGTCCTGCAGGGTATTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp ACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTAGGCCCAGGAGGTGCTaGGAACCAAGGCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: TGLRVVCCRRGKPLAFSCRPRRC*EPRLAL
Trigger: CAGTGCCAGCCTTGGTTCCCAGCACCTCCTGGGCCT...ACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCTCAGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp CCCCTGCATATCAGAACCCACAGACACACAGCCATGTCCACACCCCGGCACCTGGCGAAGATGGCCAGCTaGAGCCGCTTGACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PLHIRTHRHTAMSTPRHLAKMAS*SRLTAE
Trigger: CTCTGCAGTCAAGCGGCTCCAGCTGGCCATCTTCGC...CAGGTGCCGGGGTGTGGACATGGCTGTGTGTCTGTGGGTTCTGATATGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp AGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCGCGAAGATGGCCAGCTaGAGCCGCTTGACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RVVCCRRGKPLAFSCPRGAKMAS*SRLTAE
Trigger: CTCTGCAGTCAAGCGGCTCCAGCTGGCCATCTTCGC...GCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGACTCCTCCAGTGGGCATaGGGGATGTCATGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGLLQWA*GMSWRE
Trigger: CTCCCTCCATGACATCCCCCATGCCCACTGGAGGAG...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR CAA 72 bp GTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTaGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: VGPQSHRAEGGV*SQGKASGFQLS
Trigger: GGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp CAGAAATACCCTGCAGGACCCAGCAACGCCAAGCTGGCTAGGAATGGGAAGGGGAGAAGGCGCCTCCATTaGGTGGGGCTGGATTGGTGC +
Preference number: 4 (lower is better)
Translates to: QKYPAGPSNAKLARNGKGRRRLH*VGLDWC
Trigger: GCACCAATCCAGCCCCACTCAATGGAGGCGCCTTCT...CCCCTTCCCATTCCTAGCCAGCTTGGCGTTGCTGGGTCCTGCAGGGTATTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp CCCCTGCATATCAGAACCCACAGACACACAGCCATGTCCACACCCCGGCACCTGTCACTCCCACGGCCATaGGAACCGCTACCACCACAA +
Preference number: 4 (lower is better)
Translates to: PLHIRTHRHTAMSTPRHLSLPRP*EPLPPQ
Trigger: TTGTGGTGGTAGCGGTTCTCATGGCCGTGGGAGTGA...CAGGTGCCGGGGTGTGGACATGGCTGTGTGTCTGTGGGTTCTGATATGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp CAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGTGGTCACAGGCAAGTAGCAGGGTGTGTTaGGGGTCTCCTCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: QASLHRLLLIPTGLWSQASSRVC*GSPHPR
Trigger: CCTTGGATGAGGAGACCCTCAACACACCCTGCTACT...TGCCTGTGACCACAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp AGGGTTGTGGCGGGGAGGGAGTTGAAGGACCATTCCTGCTGTGAGCCAGGAGTGTATGCCTCTCCAGGGTaGAAGTGCAGTGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RVVAGRELKDHSCCEPGVYASPG*KCSAGL
Trigger: GAGCCCTGCACTGCACTTTCACCCTGGAGAGGCATA...CACTCCTGGCTCACAGCAGGAATGGTCCTTCAACTCCCTCCCCGCCACAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp CAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGTGGTCACAGGCATGGACAGGGGTATCTTaGAGGCATAGGGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QASLHRLLLIPTGLWSQAWTGVS*RHRVPA
Trigger: AGCTGGGACCCTATGCCTTCAAGATACCCCTGTCCA...TGCCTGTGACCACAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp ACAGGGCCGGGACCGTCCCCTGCATATCAGAACCCACAGACACACAGCCATGTCTGGCAGGGAAGGCTCTaGAGTGCAGTTCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: TGPGPSPAYQNPQTHSHVWQGRL*SAVPLA
Trigger: AGCCAGTGGAACTGCACTGCAGAGCCTTCCCTGCCA...GACATGGCTGTGTGTCTGTGGGTTCTGATATGCAGGGGACGGTCCCGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR GCA 90 bp GGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCCTTGGCAGGGAAGGCTCTaGAGTGCAGTTCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GGVLSQGKASGFQLSQRPWQGRL*SAVPLA
Trigger: AGCCAGTGGAACTGCACTGCAGAGCCTTCCCTGCCA...AGGCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp CTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGCTGGGCACACGGTGGTaGAAGCTGTCTTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LWVPKVTGLRVVCCRRGKLGTRW*KLSSGR
Trigger: CCTTCCAGAAGACAGCTTGCACCACCGTGTGCCCAG...CTTTCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGACTGGAGCCGCTTGACTaGAGAGCGAGAGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGLEPLD*RARVGL
Trigger: GAGTCCTACTCTCGCTCTGCAGTCAAGCGGCTCCAG...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp AGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCGCAGGGCTCTCTGGCTaGCATTCCAGACGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: RVVCCRRGKPLAFSCPRGAGLSG*HSRRGR
Trigger: TCTACCACGTCTGGAATGGCAGCCAGAGAGCCCTGC...GCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp AGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCGTGGAGGCCAGGCTATaGCTCTCCAGGGTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: RVVCCRRGKPLAFSCPRGVEARL*LSRVKV
Trigger: CACTTTCACCCTGGAGAGGCATAGCCTGGCCTCCAC...GCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp ACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTGGGCGTCCAGGCTGCTaGAGATCTTTTGGCGGATGG +
Preference number: 4 (lower is better)
Translates to: TGLRVVCCRRGKPLAFSCGRPGC*RSFGGW
Trigger: CCATCCGCCAAAAGATCTGCAGCAGCCTGGACGCCC...ACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCTCAGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp GGTATGGCCAGAACTCAGACACCTGGCCCCATTGAGAAGAGCAGAGAGGCACATACAGCCTCCAGTCGTTaGCCCGGGAGTTGGGGGCGT +
Preference number: 4 (lower is better)
Translates to: GMARTQTPGPIEKSREAHTASSR*PGSWGR
Trigger: ACGCCCCCAACTCCCGGGGCAACGACTGGAGGCTGT...ATGTGCCTCTCTGCTCTTCTCAATGGGGCCAGGTGTCTGAGTTCTGGCCATACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR GCA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGATCCCCGTCATCCTGTTaGCGAGCTTCCCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGSPSSC*RASQRS
Trigger: AGACCTCTGGGAAGCTCGGCAACAGGATGACGGGGA...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp ACCTCTGAGGGTGGGAGGAAGGTGCTGTCTCGGATGCCTGGGAGCCTCAAGATGCTCGGCCACAGCGATTaGAACAGGGTGACCACTCTG +
Preference number: 4 (lower is better)
Translates to: TSEGGRKVLSRMPGSLKMLGHSD*NRVTTL
Trigger: CAGAGTGGTCACCCTGTTCCAATCGCTGTGGCCGAG...CATCTTGAGGCTCCCAGGCATCCGAGACAGCACCTTCCTCCCACCCTCAGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp CAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGTGGTCACAGGCAGTGCAAGCTGTCTTCTaGAAGGCCTGTCCCTCACAG +
Preference number: 4 (lower is better)
Translates to: QASLHRLLLIPTGLWSQAVQAVF*KACPSQ
Trigger: CTGTGAGGGACAGGCCTTCCAGAAGACAGCTTGCAC...TGCCTGTGACCACAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp CAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGTGGTCACAGGCATTGAAGTTGACAGGGTaGAAGCCACCAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: QASLHRLLLIPTGLWSQALKLTG*KPPVRA
Trigger: GGCCCTCACTGGTGGCTTCCACCCTGTCAACTTCAA...TGCCTGTGACCACAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGATGGTCCAGCAGGATGTaGCAGGACTTAGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGWSSRM*QDLASS
Trigger: GCTGGAGGCTAAGTCCTGCCACATCCTGCTGGACCA...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp AGAGCCCTGAAAGATCCAGGGATAAGAAGGGTCCCTGTCCCTCAAGGGGTATGGCCGCAGAGGAGTCGGTaGTGTCCGTGTCGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: RALKDPGIRRVPVPQGVWPQRSR*CPCRSP
Trigger: GGGACTTCGACACGGACATCACCGACTCCTCTGCGG...CCATACCCCTTGAGGGACAGGGACCCTTCTTATCCCTGGATCTTTCAGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp CTCAGAGCCCCACTTCAGGAAAACCAGGGCAGAGATGCTTGCTGGGTCTGTGGCGCCTGGGTCTTGAGCTaGAAGATCCAGTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LRAPLQENQGRDACWVCGAWVLS*KIQSPA
Trigger: CGCTGGAGACTGGATCTTTCAGCTCAAGACCCAGGC...GCCACAGACCCAGCAAGCATCTCTGCCCTGGTTTTCCTGAAGTGGGGCTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp AGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCGATGGGCCTGGGTCTTaGGCTGAAAGATCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RVVCCRRGKPLAFSCPRGDGPGS*AERSSL
Trigger: GAGACTGGATCTTTCAGCTCAAGACCCAGGCCCATC...GCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp CCTTCTATGTGCGGGCTAACAGTGACCAGTGAGAGTATGCCCACAGGGATGAGCCCAGCTGGAGCCGCTTaGCTGCAGAGCGAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: PSMCGLTVTSESMPTGMSPAGAA*LQSESR
Trigger: CCTACTCTCGCTCTGCAGTCAAGCGGCTCCAGCTGG...GCTCATCCCTGTGGGCATACTCTCACTGGTCACTGTTAGCCCGCACATAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp ACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCAGACAGTAGACCCTaGGGCTATACTCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TGLRVVCCRRGKPLAFSCPDSRP*GYTPGR
Trigger: CCTCCCTGGAGTATAGCCTCAGGGTCTACTGTCTGG...ACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCTCAGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp GGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCCTTGGACAGGGGTATCTTaGAGGCATAGGGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGVLSQGKASGFQLSQRPWTGVS*RHRVPA
Trigger: AGCTGGGACCCTATGCCTTCAAGATACCCCTGTCCA...AGGCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAGGGAAGGCTCTGCAGTaGAGTTCCACTGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGGKALQ*SSTGLF
Trigger: GAACAAGCCAGTGGAACTGCACTGCAGAGCCTTCCC...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp GGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCCTAGTTCCTCCACTTGCTaGCGTGACACCTCGATCTGC +
Preference number: 4 (lower is better)
Translates to: GGVLSQGKASGFQLSQRPSSSTC*RDTSIC
Trigger: GCAGATCGAGGTGTCACGGCAGCAAGTGGAGGAACT...AGGCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp TGGGCCAGAGGATCCCGGCCTCTTGGCAGTAGAGCACAGAGACTTTCTAAGGCTCAAGTAGCGTCCCGCTaGAGTCACGGCCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: WARGSRPLGSRAQRLSKAQVASR*SHGLRS
Trigger: AGAACGGAGGCCGTGACTGCAGCGGGACGCTACTTG...AGCCTTAGAAAGTCTCTGTGCTCTACTGCCAAGAGGCCGGGATCCTCTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp TGCAGAGGCTGCCAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGCGCACAGCCCATCAGTaGAGTTCTTGGAGTCAAGTA +
Preference number: 4 (lower is better)
Translates to: CRGCQASLHRLLLIPTGLRTAHQ*SSWSQV
Trigger: TACTTGACTCCAAGAACTGCACTGATGGGCTGTGCG...CAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTGGCAGCCTCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp CCTTCTATGTGCGGGCTAACAGTGACCAGTGAGAGTATGCCCACAGGGATGAGCTTGTCGGCGGAGTCCTaGAGGGCATACACAGGCCCG +
Preference number: 4 (lower is better)
Translates to: PSMCGLTVTSESMPTGMSLSAES*RAYTGP
Trigger: CGGGCCTGTGTATGCCCTGCAGGACTCCGCCGACAA...GCTCATCCCTGTGGGCATACTCTCACTGGTCACTGTTAGCCCGCACATAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR GCA 90 bp CCCCTGCATATCAGAACCCACAGACACACAGCCATGTCCACACCCCGGCACCTGCAGGACCTCCTTCAGTaGTACAGGTGTGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PLHIRTHRHTAMSTPRHLQDLLQ*YRCVLQ
Trigger: CTGGAGGACACACCTGTAGCACTGAAGGAGGTCCTG...CAGGTGCCGGGGTGTGGACATGGCTGTGTGTCTGTGGGTTCTGATATGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR GCA 90 bp GGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCCTCAGGACCTCCTTCAGTaGTACAGGTGTGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGVLSQGKASGFQLSQRPQDLLQ*YRCVLQ
Trigger: CTGGAGGACACACCTGTAGCACTGAAGGAGGTCCTG...AGGCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp AGGCTTCATCTCATTGGAGGCAGGAATGGAAACCCAACCCAACAGCCCTGTCTGAGGCACTCCCTCCGGTaGGCGGCACTGCAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: RLHLIGGRNGNPTQQPCLRHSLR*AALQKD
Trigger: GTCCTTCTGCAGTGCCGCCCACCGGAGGGAGTGCCT...CAGACAGGGCTGTTGGGTTGGGTTTCCATTCCTGCCTCCAATGAGATGAAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp GTCCCTCAAGGGGTATGGCCAGAACTCAGACACCTGGCCCCATTGAGAAGAGCATCTGAGAGGCGCGCCTaGCGGATGATGAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: VPQGVWPELRHLAPLRRASERRA*RMMRLW
Trigger: CCACAACCTCATCATCCGCCAGGCGCGCCTCTCAGA...TGCTCTTCTCAATGGGGCCAGGTGTCTGAGTTCTGGCCATACCCCTTGAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAGTGCAAGCTGTCTTCTaGAAGGCCTGTCCCTCACAG +
Preference number: 4 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGVQAVF*KACPSQ
Trigger: CTGTGAGGGACAGGCCTTCCAGAAGACAGCTTGCAC...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp ACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCGCAGGTGCAGGAAATaGGTGTCCCGGGAGAAATCG +
Preference number: 4 (lower is better)
Translates to: TGLRVVCCRRGKPLAFSCRRCRK*VSREKS
Trigger: CGATTTCTCCCGGGACACCCATTTCCTGCACCTGCG...ACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCTCAGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp AGGGTTGTGGCGGGGAGGGAGTTGAAGGACCATTCCTGCTGTGAGCCAGGAGTGGGGAATGGCTCCATTTaGTACCAACAGGCTGACCCC +
Preference number: 4 (lower is better)
Translates to: RVVAGRELKDHSCCEPGVGNGSI*YQQADP
Trigger: GGGGTCAGCCTGTTGGTACCAAATGGAGCCATTCCC...CACTCCTGGCTCACAGCAGGAATGGTCCTTCAACTCCCTCCCCGCCACAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp TGGGCCAGAGGATCCCGGCCTCTTGGCAGTAGAGCACAGAGACTTTCTAAGGCTCTCCTCCAGTGGGCATaGGGGATGTCATGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: WARGSRPLGSRAQRLSKALLQWA*GMSWRE
Trigger: CTCCCTCCATGACATCCCCCATGCCCACTGGAGGAG...AGCCTTAGAAAGTCTCTGTGCTCTACTGCCAAGAGGCCGGGATCCTCTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCCTAGTTTGCTCCTCCAGTaGGCATGGGGGATGTCATGG +
Preference number: 4 (lower is better)
Translates to: GGVLSQGKASGFQLSQRPSLLLQ*AWGMSW
Trigger: CCATGACATCCCCCATGCCCACTGGAGGAGCAAACT...AGGCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GTCCCCTGCATATCAGAACCCACAGACACACAGCCATGTCCACACCCCGGCACCTGCAGCTGGAAAATCTaGCCTTCCCCTTCGACCTGC +
Preference number: 4 (lower is better)
Translates to: VPCISEPTDTQPCPHPGTCSWKI*PSPSTC
Trigger: GCAGGTCGAAGGGGAAGGCCAGATTTTCCAGCTGCA...GGTGCCGGGGTGTGGACATGGCTGTGTGTCTGTGGGTTCTGATATGCAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGATGCAGCTGGAAAATCTaGCCTTCCCCTTCGACCTGC +
Preference number: 4 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGCSWKI*PSPSTC
Trigger: GCAGGTCGAAGGGGAAGGCCAGATTTTCCAGCTGCA...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCCTCGCCATCTGTGGCCATaGCTACCAGCATCTCACTCT +
Preference number: 4 (lower is better)
Translates to: GGVLSQGKASGFQLSQRPRHLWP*LPASHS
Trigger: AGAGTGAGATGCTGGTAGCCATGGCCACAGATGGCG...AGGCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp ACAGGGCCGGGACCGTCCCCTGCATATCAGAACCCACAGACACACAGCCATGTCTGTCTGGGAACCTTCTaGAAGTGGGAGGGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: TGPGPSPAYQNPQTHSHVCLGTF*KWEGAF
Trigger: GAAAGCACCCTCCCACTTTCAGAAGGTTCCCAGACA...GACATGGCTGTGTGTCTGTGGGTTCTGATATGCAGGGGACGGTCCCGGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp CTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGTGTCTGGGAACCTTCTaGAAGTGGGAGGGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LWVPKVTGLRVVCCRRGKCLGTF*KWEGAF
Trigger: GAAAGCACCCTCCCACTTTCAGAAGGTTCCCAGACA...CTTTCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp AGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCAAGAGTTCCTCCACTTaGTGCCGTGACACCTCGATC +
Preference number: 4 (lower is better)
Translates to: RVVCCRRGKPLAFSCPRGKSSST*CRDTSI
Trigger: GATCGAGGTGTCACGGCAGCAAGTGGAGGAACTCTT...GCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp TGGGCCAGAGGATCCCGGCCTCTTGGCAGTAGAGCACAGAGACTTTCTAAGGCTCTGGGCACACGGTGGTaGAAGCTGTCTTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: WARGSRPLGSRAQRLSKALGTRW*KLSSGR
Trigger: CCTTCCAGAAGACAGCTTGCACCACCGTGTGCCCAG...AGCCTTAGAAAGTCTCTGTGCTCTACTGCCAAGAGGCCGGGATCCTCTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp GCACAAACCTGGGCACAGAGGTCATGTCCACATGTGGGGATAGGTGTGCGTGTTGCGCACACTCTGTGCTaGAGGCAGACCACTTGCTCC +
Preference number: 4 (lower is better)
Translates to: AQTWAQRSCPHVGIGVRVAHTLC*RQTTCS
Trigger: GGAGCAAGTGGTCTGCCTGCAGCACAGAGTGTGCGC...AACACGCACACCTATCCCCACATGTGGACATGACCTCTGTGCCCAGGTTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR GCA 90 bp GTGATCCTAGTCCCTGTCACTGCCCGTGGGCTGAAAGGGACAAGAATTCATCCCGGGCGTCCAGGCTGCTaGAGATCTTTTGGCGGATGG +
Preference number: 4 (lower is better)
Translates to: VILVPVTARGLKGTRIHPGRPGC*RSFGGW
Trigger: CCATCCGCCAAAAGATCTGCAGCAGCCTGGACGCCC...GGGATGAATTCTTGTCCCTTTCAGCCCACGGGCAGTGACAGGGACTAGGATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR GCA 90 bp TGGGCCAGAGGATCCCGGCCTCTTGGCAGTAGAGCACAGAGACTTTCTAAGGCTTCCATGGACAGCTTCTaGGCCAACAGCCTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: WARGSRPLGSRAQRLSKASMDSF*ANSLQS
Trigger: CGACTGGAGGCTGTTGGCGCAGAAGCTGTCCATGGA...AGCCTTAGAAAGTCTCTGTGCTCTACTGCCAAGAGGCCGGGATCCTCTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GCACAAACCTGGGCACAGAGGTCATGTCCACATGTGGGGATAGGTGTGCGTGTTCCACACAGGTGTAGTTaGCCGTGTCTGAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: AQTWAQRSCPHVGIGVRVPHRCS*PCLRGA
Trigger: CGCGCCTCTCAGACACGGCCAACTACACCTGTGTGG...AACACGCACACCTATCCCCACATGTGGACATGACCTCTGTGCCCAGGTTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp AGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCCATCAGTGCAGTTCTTaGAGTCAAGTAGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: RVVCCRRGKPLAFSCPRGHQCSS*SQVASR
Trigger: GCGGGACGCTACTTGACTCCAAGAACTGCACTGATG...GCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp TGGGCCAGAGGATCCCGGCCTCTTGGCAGTAGAGCACAGAGACTTTCTAAGGCTGCATGGGGGATGTCATaGAGGGAGAGGCGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: WARGSRPLGSRAQRLSKAAWGMS*RERRRL
Trigger: CAACCTACGCCTCTCCCTCCATGACATCCCCCATGC...AGCCTTAGAAAGTCTCTGTGCTCTACTGCCAAGAGGCCGGGATCCTCTGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GGGAGAGAGCCCTCCCTGGAACACCCCCTCCCTCTCAGTAAGAGTTTTGGCCATCGCCATCTGTGGCCATaGCTACCAGCATCTCACTCT +
Preference number: 4 (lower is better)
Translates to: GREPSLEHPLPLSKSFGHRHLWP*LPASHS
Trigger: AGAGTGAGATGCTGGTAGCCATGGCCACAGATGGCG...ATGGCCAAAACTCTTACTGAGAGGGAGGGGGTGTTCCAGGGAGGGCTCTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp GGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCCTAGCAATCGCCATCTGTaGCCATGGCTACCAGCATCT +
Preference number: 4 (lower is better)
Translates to: GGVLSQGKASGFQLSQRPSNRHL*PWLPAS
Trigger: AGATGCTGGTAGCCATGGCCACAGATGGCGATTGCT...AGGCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp GTGATCCTAGTCCCTGTCACTGCCCGTGGGCTGAAAGGGACAAGAATTCATCCCTATGCCTCTCCAGGGTaGAAGTGCAGTGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VILVPVTARGLKGTRIHPYASPG*KCSAGL
Trigger: GAGCCCTGCACTGCACTTTCACCCTGGAGAGGCATA...GGGATGAATTCTTGTCCCTTTCAGCCCACGGGCAGTGACAGGGACTAGGATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR GCA 90 bp ACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTAAGAGTTCCTCCACTTaGTGCCGTGACACCTCGATC +
Preference number: 4 (lower is better)
Translates to: TGLRVVCCRRGKPLAFSCKSSST*CRDTSI
Trigger: GATCGAGGTGTCACGGCAGCAAGTGGAGGAACTCTT...ACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCTCAGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp ACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTTCGGCCAACGTTGTGTaGAGCTGGAAAATCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TGLRVVCCRRGKPLAFSCSANVV*SWKIWP
Trigger: AGGCCAGATTTTCCAGCTGCACACAACGTTGGCCGA...ACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCTCAGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp GGGAGCCTCAAGATGGGGGACCAGAGAGCCCTGAAAGATCCAGGGATAAGAAGGCCAGCATCTCACTCTTaGCCATCTCCTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GSLKMGDQRALKDPGIRRPASHS*PSPPRH
Trigger: GTGCCTTGGAGGAGATGGGCAAGAGTGAGATGCTGG...CCTTCTTATCCCTGGATCTTTCAGGGCTCTCTGGTCCCCCATCTTGAGGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp GGGAGAGAGCCCTCCCTGGAACACCCCCTCCCTCTCAGTAAGAGTTTTGGCCATGTGACGTGGTCATTCTaGCTGACCCACTCGCCATTA +
Preference number: 4 (lower is better)
Translates to: GREPSLEHPLPLSKSFGHVTWSF*LTHSPL
Trigger: TAATGGCGAGTGGGTCAGCCAGAATGACCACGTCAC...ATGGCCAAAACTCTTACTGAGAGGGAGGGGGTGTTCCAGGGAGGGCTCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp GCACAAACCTGGGCACAGAGGTCATGTCCACATGTGGGGATAGGTGTGCGTGTTTGGTGCTCCGGCGCTTaGCCACGATATTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: AQTWAQRSCPHVGIGVRVWCSGA*PRYSWP
Trigger: TGGCCAAGAATATCGTGGCCAAGCGCCGGAGCACCA...AACACGCACACCTATCCCCACATGTGGACATGACCTCTGTGCCCAGGTTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp TCTCGGATGCCTGGGAGCCTCAAGATGGGGGACCAGAGAGCCCTGAAAGATCCACATCAGTGCAGTTCTTaGAGTCAAGTAGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: SRMPGSLKMGDQRALKDPHQCSS*SQVASR
Trigger: GCGGGACGCTACTTGACTCCAAGAACTGCACTGATG...TGGATCTTTCAGGGCTCTCTGGTCCCCCATCTTGAGGCTCCCAGGCATCCGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAGGGCTCAATACTGTCTaGGAACCTTCTGAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGGLNTV*EPSESG
Trigger: CCCACTTTCAGAAGGTTCCCAGACAGTATTGAGCCC...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GACCATGTGAACACAGAATTGAAACCTGTGGGTCCCCAAAGTCACAGGGCTGAGACAGGAGTAGGCCTGTaGGCCCACAGGTCACCGAGG +
Preference number: 4 (lower is better)
Translates to: DHVNTELKPVGPQSHRAETGVGL*AHRSPR
Trigger: CCTCGGTGACCTGTGGGCCCACAGGCCTACTCCTGT...CTCAGCCCTGTGACTTTGGGGACCCACAGGTTTCAATTCTGTGTTCACATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp TCTCGGATGCCTGGGAGCCTCAAGATGGGGGACCAGAGAGCCCTGAAAGATCCACTGCTGCAGATCTTTTaGCGGATGGACAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: SRMPGSLKMGDQRALKDPLLQIF*RMDRGI
Trigger: GATACCCCTGTCCATCCGCCAAAAGATCTGCAGCAG...TGGATCTTTCAGGGCTCTCTGGTCCCCCATCTTGAGGCTCCCAGGCATCCGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp ACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCTGCTGCAGATCTTTTaGCGGATGGACAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: TGLRVVCCRRGKPLAFSCLLQIF*RMDRGI
Trigger: GATACCCCTGTCCATCCGCCAAAAGATCTGCAGCAG...ACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCTCAGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp CTCAGAGCCCCACTTCAGGAAAACCAGGGCAGAGATGCTTGCTGGGTCTGTGGCTTAGGTACCGGTCCATaGACAGCTTCTGCGCCAACA +
Preference number: 4 (lower is better)
Translates to: LRAPLQENQGRDACWVCGLGTGP*TASAPT
Trigger: TGTTGGCGCAGAAGCTGTCCATGGACCGGTACCTAA...GCCACAGACCCAGCAAGCATCTCTGCCCTGGTTTTCCTGAAGTGGGGCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CAA 72 bp GAGCGGTCCCTAGCCCAGGACCATGTGAACACAGAATaGAAACCTGTGGGTCCCCAAAGTCACAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ERSLAQDHVNTE*KPVGPQSHRAE
Trigger: CTCAGCCCTGTGACTTTGGGGACCCACAGGTTTCAATTCTGTGTTCACATGGTCCTGGGCTAGGGACCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp GTGATCCTAGTCCCTGTCACTGCCCGTGGGCTGAAAGGGACAAGAATTCATCCCGATGGGCCTGGGTCTTaGGCTGAAAGATCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: VILVPVTARGLKGTRIHPDGPGS*AERSSL
Trigger: GAGACTGGATCTTTCAGCTCAAGACCCAGGCCCATC...GGGATGAATTCTTGTCCCTTTCAGCCCACGGGCAGTGACAGGGACTAGGATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp TGGGCCAGAGGATCCCGGCCTCTTGGCAGTAGAGCACAGAGACTTTCTAAGGCTAGTAGGACTCGCCCATaGATACGTAGGTACCCAGCT +
Preference number: 4 (lower is better)
Translates to: WARGSRPLGSRAQRLSKASRTRP*IRRYPA
Trigger: AGCTGGGTACCTACGTATTCATGGGCGAGTCCTACT...AGCCTTAGAAAGTCTCTGTGCTCTACTGCCAAGAGGCCGGGATCCTCTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp AGGCTTCATCTCATTGGAGGCAGGAATGGAAACCCAACCCAACAGCCCTGTCTGGCAGGGCTCTCTGGCTaGCATTCCAGACGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: RLHLIGGRNGNPTQQPCLAGLSG*HSRRGR
Trigger: TCTACCACGTCTGGAATGGCAGCCAGAGAGCCCTGC...CAGACAGGGCTGTTGGGTTGGGTTTCCATTCCTGCCTCCAATGAGATGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR GCA 90 bp AGGCTTCATCTCATTGGAGGCAGGAATGGAAACCCAACCCAACAGCCCTGTCTGAGGGTGAAAGTGCAGTaGAGGGCTCTCTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RLHLIGGRNGNPTQQPCLRVKVQ*RALWLP
Trigger: TGGCAGCCAGAGAGCCCTGCACTGCACTTTCACCCT...CAGACAGGGCTGTTGGGTTGGGTTTCCATTCCTGCCTCCAATGAGATGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR GCA 90 bp AGGCTTCATCTCATTGGAGGCAGGAATGGAAACCCAACCCAACAGCCCTGTCTGTCCCCGTCATCCTGTTaGCGAGCTTCCCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: RLHLIGGRNGNPTQQPCLSPSSC*RASQRS
Trigger: AGACCTCTGGGAAGCTCGGCAACAGGATGACGGGGA...CAGACAGGGCTGTTGGGTTGGGTTTCCATTCCTGCCTCCAATGAGATGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp TGGGCCAGAGGATCCCGGCCTCTTGGCAGTAGAGCACAGAGACTTTCTAAGGCTGTGACGTGGTCATTCTaGCTGACCCACTCGCCATTA +
Preference number: 4 (lower is better)
Translates to: WARGSRPLGSRAQRLSKAVTWSF*LTHSPL
Trigger: TAATGGCGAGTGGGTCAGCCAGAATGACCACGTCAC...AGCCTTAGAAAGTCTCTGTGCTCTACTGCCAAGAGGCCGGGATCCTCTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GGTATGGCCAGAACTCAGACACCTGGCCCCATTGAGAAGAGCAGAGAGGCACATCTCTCCTGTGTGACGTaGTCATTCTGGCTGACCCAC +
Preference number: 4 (lower is better)
Translates to: GMARTQTPGPIEKSREAHLSCVT*SFWLTH
Trigger: GTGGGTCAGCCAGAATGACCACGTCACACAGGAGAG...ATGTGCCTCTCTGCTCTTCTCAATGGGGCCAGGTGTCTGAGTTCTGGCCATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp CTCAGAGCCCCACTTCAGGAAAACCAGGGCAGAGATGCTTGCTGGGTCTGTGGCCGGATGATGAGGTTGTaGTCAATGGTGAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LRAPLQENQGRDACWVCGRMMRL*SMVSRK
Trigger: CTTCCTGCTCACCATTGACCACAACCTCATCATCCG...GCCACAGACCCAGCAAGCATCTCTGCCCTGGTTTTCCTGAAGTGGGGCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp AGAGCCCTGAAAGATCCAGGGATAAGAAGGGTCCCTGTCCCTCAAGGGGTATGGTTGAAGTTGACAGGGTaGAAGCCACCAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RALKDPGIRRVPVPQGVWLKLTG*KPPVRA
Trigger: GGCCCTCACTGGTGGCTTCCACCCTGTCAACTTCAA...CCATACCCCTTGAGGGACAGGGACCCTTCTTATCCCTGGATCTTTCAGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp AGAGCCCTGAAAGATCCAGGGATAAGAAGGGTCCCTGTCCCTCAAGGGGTATGGGGGAATGGCTCCATTTaGTACCAACAGGCTGACCCC +
Preference number: 4 (lower is better)
Translates to: RALKDPGIRRVPVPQGVWGNGSI*YQQADP
Trigger: GGGGTCAGCCTGTTGGTACCAAATGGAGCCATTCCC...CCATACCCCTTGAGGGACAGGGACCCTTCTTATCCCTGGATCTTTCAGGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CAA 72 bp CCTCCCTGGAACACCCCCTCCCTCTCAGTAAGAGTTTaGGCCATCACGAGACCAGGAATCACCAAACAGACC +
Preference number: 4 (lower is better)
Translates to: PPWNTPSLSVRV*AITRPGITKQT
Trigger: GGTCTGTTTGGTGATTCCTGGTCTCGTGATGGCCAAAACTCTTACTGAGAGGGAGGGGGTGTTCCAGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
3UTR CAA 72 bp CTGGCTAGGAATGGGAAGGGGAGAGGCTTCATCTCATaGGAGGCAGGAATGGAAACCCAACCCAACAGCCCT +
Preference number: 4 (lower is better)
Translates to: LARNGKGRGFIS*EAGMETQPNSP
Trigger: AGGGCTGTTGGGTTGGGTTTCCATTCCTGCCTCCAATGAGATGAAGCCTCTCCCCTTCCCATTCCTAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp GACCATGTGAACACAGAATTGAAACCTGTGGGTCCCCAAAGTCACAGGGCTGAGTCACTCCCACGGCCATaGGAACCGCTACCACCACAA +
Preference number: 4 (lower is better)
Translates to: DHVNTELKPVGPQSHRAESLPRP*EPLPPQ
Trigger: TTGTGGTGGTAGCGGTTCTCATGGCCGTGGGAGTGA...CTCAGCCCTGTGACTTTGGGGACCCACAGGTTTCAATTCTGTGTTCACATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp GTGATCCTAGTCCCTGTCACTGCCCGTGGGCTGAAAGGGACAAGAATTCATCCCAGTAGGACTCGCCCATaGATACGTAGGTACCCAGCT +
Preference number: 4 (lower is better)
Translates to: VILVPVTARGLKGTRIHPSRTRP*IRRYPA
Trigger: AGCTGGGTACCTACGTATTCATGGGCGAGTCCTACT...GGGATGAATTCTTGTCCCTTTCAGCCCACGGGCAGTGACAGGGACTAGGATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp GACCATGTGAACACAGAATTGAAACCTGTGGGTCCCCAAAGTCACAGGGCTGAGCCAGACAGTAGACCCTaGGGCTATACTCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: DHVNTELKPVGPQSHRAEPDSRP*GYTPGR
Trigger: CCTCCCTGGAGTATAGCCTCAGGGTCTACTGTCTGG...CTCAGCCCTGTGACTTTGGGGACCCACAGGTTTCAATTCTGTGTTCACATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp ACCTCTGAGGGTGGGAGGAAGGTGCTGTCTCGGATGCCTGGGAGCCTCAAGATGGCAGTGCAGTTCCACTaGCTTGTTCTTTACGATGTA +
Preference number: 4 (lower is better)
Translates to: TSEGGRKVLSRMPGSLKMAVQFH*LVLYDV
Trigger: TACATCGTAAAGAACAAGCCAGTGGAACTGCACTGC...CATCTTGAGGCTCCCAGGCATCCGAGACAGCACCTTCCTCCCACCCTCAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp GACCATGTGAACACAGAATTGAAACCTGTGGGTCCCCAAAGTCACAGGGCTGAGCCAAGGGTACCTCCTTaGCCAGAGGCTCCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: DHVNTELKPVGPQSHRAEPRVPP*PEAPGQ
Trigger: TTGACCAGGAGCCTCTGGCCAAGGAGGTACCCTTGG...CTCAGCCCTGTGACTTTGGGGACCCACAGGTTTCAATTCTGTGTTCACATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GACCATGTGAACACAGAATTGAAACCTGTGGGTCCCCAAAGTCACAGGGCTGAGTGGTGCTCCGGCGCTTaGCCACGATATTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: DHVNTELKPVGPQSHRAEWCSGA*PRYSWP
Trigger: TGGCCAAGAATATCGTGGCCAAGCGCCGGAGCACCA...CTCAGCCCTGTGACTTTGGGGACCCACAGGTTTCAATTCTGTGTTCACATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp TGGGCCAGAGGATCCCGGCCTCTTGGCAGTAGAGCACAGAGACTTTCTAAGGCTACTTGCCCTGGGGAATaGCTCCATTTGGTACCAACA +
Preference number: 4 (lower is better)
Translates to: WARGSRPLGSRAQRLSKATCPGE*LHLVPT
Trigger: TGTTGGTACCAAATGGAGCCATTCCCCAGGGCAAGT...AGCCTTAGAAAGTCTCTGTGCTCTACTGCCAAGAGGCCGGGATCCTCTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR CAA 72 bp CACCTTCTAAGTAAGAGTCGGACTGTAAGCTGGGACTaGCTCACTAAGTGCTCCCTCAGGTCCCAGACAGGC +
Preference number: 4 (lower is better)
Translates to: HLLSKSRTVSWD*LTKCSLRSQTG
Trigger: GCCTGTCTGGGACCTGAGGGAGCACTTAGTGAGCAAGTCCCAGCTTACAGTCCGACTCTTACTTAGAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp GTGGAGCATCCCAGGATAAAAGGACACTTAAGCCCAGAGAAAGCAGTTATGTGCCTCCACTTGCTGCCGTaGCACCTCGATCTGCACCTC +
Preference number: 4 (lower is better)
Translates to: VEHPRIKGHLSPEKAVMCLHLLP*HLDLHL
Trigger: GAGGTGCAGATCGAGGTGTCACGGCAGCAAGTGGAG...GCACATAACTGCTTTCTCTGGGCTTAAGTGTCCTTTTATCCTGGGATGCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp GACCATGTGAACACAGAATTGAAACCTGTGGGTCCCCAAAGTCACAGGGCTGAGAGTAGCAGGGTGTGTTaGGGGTCTCCTCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: DHVNTELKPVGPQSHRAESSRVC*GSPHPR
Trigger: CCTTGGATGAGGAGACCCTCAACACACCCTGCTACT...CTCAGCCCTGTGACTTTGGGGACCCACAGGTTTCAATTCTGTGTTCACATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp TCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTTTGCTCGGAGGGGCGGACGGGTaGAGGAGCTGCGGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: SFAFPKKLGLSLPLLFLLGGADG*RSCGLL
Trigger: CAACAACCCGCAGCTCCTGCACCCGTCCGCCCCTCC...GAGCAAAAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GACCATGTGAACACAGAATTGAAACCTGTGGGTCCCCAAAGTCACAGGGCTGAGAGTTTGCTCCTCCAGTaGGCATGGGGGATGTCATGG +
Preference number: 4 (lower is better)
Translates to: DHVNTELKPVGPQSHRAESLLLQ*AWGMSW
Trigger: CCATGACATCCCCCATGCCCACTGGAGGAGCAAACT...CTCAGCCCTGTGACTTTGGGGACCCACAGGTTTCAATTCTGTGTTCACATGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp AGGCTTCATCTCATTGGAGGCAGGAATGGAAACCCAACCCAACAGCCCTGTCTGACTCGCCATTACACTTaGAGTAGATCTGCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RLHLIGGRNGNPTQQPCLTRHYT*SRSAWQ
Trigger: CTGCCACGCAGATCTACTTCAAGTGTAATGGCGAGT...CAGACAGGGCTGTTGGGTTGGGTTTCCATTCCTGCCTCCAATGAGATGAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp ATCAACTTGTCTCTACTCGATTCTCAGAGAAGCGTGGGAACCCAAGGGGCCTCGTCGTTTAGAGTTCTCTaGTTCAGCACGCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: INLSLLDSQRSVGTQGASSFRVL*FSTHSP
Trigger: TGGGCTGTGCGTGCTGAATCAGAGAACTCTAAACGA...CGAGGCCCCTTGGGTTCCCACGCTTCTCTGAGAATCGAGTAGAGACAAGTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp TCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTTTGCTCAGGCACTCCCTCCGGTaGGCGGCACTGCAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SFAFPKKLGLSLPLLFLLRHSLR*AALQKD
Trigger: GTCCTTCTGCAGTGCCGCCCACCGGAGGGAGTGCCT...GAGCAAAAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp TCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTTTGCTCTCACGGCCTCCGTTCTaGGGTGGCGGTGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: SFAFPKKLGLSLPLLFLLSRPPF*GGGAMH
Trigger: GTGCATGGCACCGCCACCCCAGAACGGAGGCCGTGA...GAGCAAAAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GACCATGTGAACACAGAATTGAAACCTGTGGGTCCCCAAAGTCACAGGGCTGAGTTAGGTACCGGTCCATaGACAGCTTCTGCGCCAACA +
Preference number: 4 (lower is better)
Translates to: DHVNTELKPVGPQSHRAELGTGP*TASAPT
Trigger: TGTTGGCGCAGAAGCTGTCCATGGACCGGTACCTAA...CTCAGCCCTGTGACTTTGGGGACCCACAGGTTTCAATTCTGTGTTCACATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GACCATGTGAACACAGAATTGAAACCTGTGGGTCCCCAAAGTCACAGGGCTGAGAGCAATCGCCATCTGTaGCCATGGCTACCAGCATCT +
Preference number: 4 (lower is better)
Translates to: DHVNTELKPVGPQSHRAESNRHL*PWLPAS
Trigger: AGATGCTGGTAGCCATGGCCACAGATGGCGATTGCT...CTCAGCCCTGTGACTTTGGGGACCCACAGGTTTCAATTCTGTGTTCACATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp CTGGATAATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACACAGTGGGGCACGGTaGGGACGACAGGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: LDNKSFAFPKKLGLSLPLHSGAR*GRQGGT
Trigger: TGTGCCGCCCTGTCGTCCTCACCGTGCCCCACTGTG...TAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATTATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp CATCCCAGGATAAAAGGACACTTAAGCCCAGAGAAAGCAGTTATGTGCCTGAAGTCCATGGACAGCTTCTaGGCCAACAGCCTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: HPRIKGHLSPEKAVMCLKSMDSF*ANSLQS
Trigger: CGACTGGAGGCTGTTGGCGCAGAAGCTGTCCATGGA...CTTCAGGCACATAACTGCTTTCTCTGGGCTTAAGTGTCCTTTTATCCTGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp CATCCCAGGATAAAAGGACACTTAAGCCCAGAGAAAGCAGTTATGTGCCTGAAGCCAAGGGTACCTCCTTaGCCAGAGGCTCCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: HPRIKGHLSPEKAVMCLKPRVPP*PEAPGQ
Trigger: TTGACCAGGAGCCTCTGGCCAAGGAGGTACCCTTGG...CTTCAGGCACATAACTGCTTTCTCTGGGCTTAAGTGTCCTTTTATCCTGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp GACCATGTGAACACAGAATTGAAACCTGTGGGTCCCCAAAGTCACAGGGCTGAGCGGATGATGAGGTTGTaGTCAATGGTGAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DHVNTELKPVGPQSHRAERMMRL*SMVSRK
Trigger: CTTCCTGCTCACCATTGACCACAACCTCATCATCCG...CTCAGCCCTGTGACTTTGGGGACCCACAGGTTTCAATTCTGTGTTCACATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GACCATGTGAACACAGAATTGAAACCTGTGGGTCCCCAAAGTCACAGGGCTGAGTGGCCACGATATTCTTaGCCACACAGGTGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: DHVNTELKPVGPQSHRAEWPRYS*PHRCSW
Trigger: CCAACTACACCTGTGTGGCCAAGAATATCGTGGCCA...CTCAGCCCTGTGACTTTGGGGACCCACAGGTTTCAATTCTGTGTTCACATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp CTGGATAATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTAGCCTCCGTTCTGGGGTaGCGGTGCCATGCACTCGCG +
Preference number: 4 (lower is better)
Translates to: LDNKSFAFPKKLGLSLPLASVLG*RCHALA
Trigger: CGCGAGTGCATGGCACCGCCACCCCAGAACGGAGGC...TAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATTATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp TCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTTTGCTCAGGCCCAGGAGGTGCTaGGAACCAAGGCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: SFAFPKKLGLSLPLLFLLRPRRC*EPRLAL
Trigger: CAGTGCCAGCCTTGGTTCCCAGCACCTCCTGGGCCT...GAGCAAAAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GACCATGTGAACACAGAATTGAAACCTGTGGGTCCCCAAAGTCACAGGGCTGAGAACGTTGTGTGCAGCTaGAAAATCTGGCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: DHVNTELKPVGPQSHRAENVVCS*KIWPSP
Trigger: AGGGGAAGGCCAGATTTTCCAGCTGCACACAACGTT...CTCAGCCCTGTGACTTTGGGGACCCACAGGTTTCAATTCTGTGTTCACATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR CAA 72 bp ATCTTCCCTCTCTGCTTGTGGACAGGAAAAAGCAGTTaGCCTGAACTGAACTCGACCCGGGATAAGAGAGCG +
Preference number: 4 (lower is better)
Translates to: IFPLCLWTGKSS*PELNSTRDKRA
Trigger: CGCTCTCTTATCCCGGGTCGAGTTCAGTTCAGGCAAACTGCTTTTTCCTGTCCACAAGCAGAGAGGGAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
3UTR CAA 72 bp ACGGGCAAAGGAGAGAGCATGCAGACCACAATCAACTaGTCTCTACTCGATTCTCAGAGAAGCGTGGGAACC +
Preference number: 4 (lower is better)
Translates to: TGKGESMQTTIN*SLLDSQRSVGT
Trigger: GGTTCCCACGCTTCTCTGAGAATCGAGTAGAGACAAGTTGATTGTGGTCTGCATGCTCTCTCCTTTGCCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR GCA 90 bp TCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTTTGCTCGCGCACACTCTGTGCTaGAGGCAGACCACTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SFAFPKKLGLSLPLLFLLAHTLC*RQTTCS
Trigger: GGAGCAAGTGGTCTGCCTGCAGCACAGAGTGTGCGC...GAGCAAAAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp CTGGATAATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACCATGCACTCGCGGCTaGGCCAGTGCGCACACTCTG +
Preference number: 4 (lower is better)
Translates to: LDNKSFAFPKKLGLSLPLPCTRG*ASAHTL
Trigger: CAGAGTGTGCGCACTGGCGCAGCCGCGAGTGCATGG...TAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATTATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp CTGGATAATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTATTGTCGGCGGAGTCCTaGAGGGCATACACAGGCCCG +
Preference number: 4 (lower is better)
Translates to: LDNKSFAFPKKLGLSLPLLSAES*RAYTGP
Trigger: CGGGCCTGTGTATGCCCTGCAGGACTCCGCCGACAA...TAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATTATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp CTGGATAATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTAGGTAGGCCCAGGAGGTaGTGGGAACCAAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LDNKSFAFPKKLGLSLPLGRPRR*WEPRLA
Trigger: TGCCAGCCTTGGTTCCCAGCACCTCCTGGGCCTACC...TAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATTATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp TCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTTTGCTCCTGGAGCCGCTTGACTaGAGAGCGAGAGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: SFAFPKKLGLSLPLLFLLLEPLD*RARVGL
Trigger: GAGTCCTACTCTCGCTCTGCAGTCAAGCGGCTCCAG...GAGCAAAAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp GTGGAGCATCCCAGGATAAAAGGACACTTAAGCCCAGAGAAAGCAGTTATGTGCACTTGCCCTGGGGAATaGCTCCATTTGGTACCAACA +
Preference number: 4 (lower is better)
Translates to: VEHPRIKGHLSPEKAVMCTCPGE*LHLVPT
Trigger: TGTTGGTACCAAATGGAGCCATTCCCCAGGGCAAGT...GCACATAACTGCTTTCTCTGGGCTTAAGTGTCCTTTTATCCTGGGATGCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CCA 90 bp GTGGAGCATCCCAGGATAAAAGGACACTTAAGCCCAGAGAAAGCAGTTATGTGCAACGTTGTGTGCAGCTaGAAAATCTGGCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: VEHPRIKGHLSPEKAVMCNVVCS*KIWPSP
Trigger: AGGGGAAGGCCAGATTTTCCAGCTGCACACAACGTT...GCACATAACTGCTTTCTCTGGGCTTAAGTGTCCTTTTATCCTGGGATGCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR TCA 90 bp CTGGATAATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTAAGAAGGCGCCTCCATTaGGTGGGGCTGGATTGGTGC +
Preference number: 4 (lower is better)
Translates to: LDNKSFAFPKKLGLSLPLRRRLH*VGLDWC
Trigger: GCACCAATCCAGCCCCACTCAATGGAGGCGCCTTCT...TAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATTATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp AATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTAACCAAAGGTGCCGCTaGCACTGCTGCTGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: NKSFAFPKKLGLSLPLLFNQRCR*HCCWGP
Trigger: GGGACCCCAGCAGCAGTGTCAGCGGCACCTTTGGTT...AAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp AATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTGTCCGAGTACGCTTCTaGCAGCCTCGGCCACAGCGA +
Preference number: 4 (lower is better)
Translates to: NKSFAFPKKLGLSLPLLFVRVRF*QPRPQR
Trigger: TCGCTGTGGCCGAGGCTGGCAGAAGCGTACTCGGAC...AAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp TCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTTTGCTCCCAGCATCTCACTCTTaGCCATCTCCTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: SFAFPKKLGLSLPLLFLLPASHS*PSPPRH
Trigger: GTGCCTTGGAGGAGATGGGCAAGAGTGAGATGCTGG...GAGCAAAAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp AATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTGCTGGGAACCAAGGCTaGCACTGCGCAGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: NKSFAFPKKLGLSLPLLFAGNQG*HCAGAG
Trigger: TCCTGCACCTGCGCAGTGCCAGCCTTGGTTCCCAGC...AAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp CTGGATAATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTAGCCTGGGTCTTGAGCTaGAAGATCCAGTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LDNKSFAFPKKLGLSLPLAWVLS*KIQSPA
Trigger: CGCTGGAGACTGGATCTTTCAGCTCAAGACCCAGGC...TAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATTATCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR TCA 90 bp TCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTTTGCTCACTCGCCATTACACTTaGAGTAGATCTGCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SFAFPKKLGLSLPLLFLLTRHYT*SRSAWQ
Trigger: CTGCCACGCAGATCTACTTCAAGTGTAATGGCGAGT...GAGCAAAAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp CTGGATAATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTAAGTTCCTCCACTTGCTaGCGTGACACCTCGATCTGC +
Preference number: 4 (lower is better)
Translates to: LDNKSFAFPKKLGLSLPLSSSTC*RDTSIC
Trigger: GCAGATCGAGGTGTCACGGCAGCAAGTGGAGGAACT...TAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATTATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp AATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTAGGGTGAAAGTGCAGTaGAGGGCTCTCTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: NKSFAFPKKLGLSLPLLFRVKVQ*RALWLP
Trigger: TGGCAGCCAGAGAGCCCTGCACTGCACTTTCACCCT...AAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp AATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTCGCAGGTGCAGGAAATaGGTGTCCCGGGAGAAATCG +
Preference number: 4 (lower is better)
Translates to: NKSFAFPKKLGLSLPLLFRRCRK*VSREKS
Trigger: CGATTTCTCCCGGGACACCCATTTCCTGCACCTGCG...AAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR GCA 90 bp AATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTTCGGCCAACGTTGTGTaGAGCTGGAAAATCTGGCCT +
Preference number: 4 (lower is better)
Translates to: NKSFAFPKKLGLSLPLLFSANVV*SWKIWP
Trigger: AGGCCAGATTTTCCAGCTGCACACAACGTTGGCCGA...AAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp CTGGATAATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTATGGCCACGATATTCTTaGCCACACAGGTGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: LDNKSFAFPKKLGLSLPLWPRYS*PHRCSW
Trigger: CCAACTACACCTGTGTGGCCAAGAATATCGTGGCCA...TAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATTATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp CTGGATAATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTAGGGCTCAATACTGTCTaGGAACCTTCTGAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LDNKSFAFPKKLGLSLPLGLNTV*EPSESG
Trigger: CCCACTTTCAGAAGGTTCCCAGACAGTATTGAGCCC...TAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATTATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CCA 90 bp CTGGATAATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTAGCAGTGCAGTTCCACTaGCTTGTTCTTTACGATGTA +
Preference number: 4 (lower is better)
Translates to: LDNKSFAFPKKLGLSLPLAVQFH*LVLYDV
Trigger: TACATCGTAAAGAACAAGCCAGTGGAACTGCACTGC...TAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATTATCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 90 bp GCAGGTGCAGGAAATGGGTGTCCCGGGAGAAATCGCCTGGGTACGTaGCCGGCGGGAGGACACCCAGCAGGTCGGCTCCATCAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: AGAGNGCPGRNRLGT*PAGGHPAGRLHQPG
Trigger: GCCTGGCTGATGGAGCCGACCTGCTGGGTGTCCTCCCGCCGGGCACGTACCCAGGCGATTTCTCCCGGGACACCCATTTCCTGCACCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS CCA 90 bp GGCACTGCGCAGGTGCAGGAAATGGGTGTCCCGGGAGAAATCGCCTaGGTACGTGCCCGGCGGGAGGACACCCAGCAGGTCGGCTCCATC +
Preference number: 5 (lower is better)
Translates to: GTAQVQEMGVPGEIA*VRARREDTQQVGSI
Trigger: GATGGAGCCGACCTGCTGGGTGTCCTCCCGCCGGGCACGTACCCAGGCGATTTCTCCCGGGACACCCATTTCCTGCACCTGCGCAGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS CCA 90 bp AGGAGGTGCTGGGAACCAAGGCTGGCACTGCGCAGGTGCAGGAAATaGGTGTCCCGGGAGAAATCGCCTGGGTACGTGCCCGGCGGGAGG +
Preference number: 5 (lower is better)
Translates to: RRCWEPRLALRRCRK*VSREKSPGYVPGGR
Trigger: CCTCCCGCCGGGCACGTACCCAGGCGATTTCTCCCGGGACACCCATTTCCTGCACCTGCGCAGTGCCAGCCTTGGTTCCCAGCACCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS CCA 90 bp CCGCTGACACTGCTGCTGGGGTCCCGAGGTAGGCCCAGGAGGTGCTaGGAACCAAGGCTGGCACTGCGCAGGTGCAGGAAATGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: PLTLLLGSRGRPRRC*EPRLALRRCRKWVS
Trigger: GGACACCCATTTCCTGCACCTGCGCAGTGCCAGCCTTGGTTCCCAGCACCTCCTGGGCCTACCTCGGGACCCCAGCAGCAGTGTCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp GTGCAGAGGCTGCCAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGTGGTGCTCCGGCGCTaGGCCACGATATTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: VQRLPGLLAPSPTDPHRPVVLRR*ATIFLA
Trigger: GGCCAAGAATATCGTGGCCAAGCGCCGGAGCACCAC...AGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTGGCAGCCTCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp CTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGAACAGCCTCCAGTCGTaGCCCCGGGAGTTGGGGGCG +
Preference number: 5 (lower is better)
Translates to: LWVPKVTGLRVVCCRRGKNSLQS*PRELGA
Trigger: CGCCCCCAACTCCCGGGGCAACGACTGGAGGCTGTT...CTTTCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp GTGCAGAGGCTGCCAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGCACTGGCCAGGCTGTaGAGGTCCCCGTCATCCTGT +
Preference number: 5 (lower is better)
Translates to: VQRLPGLLAPSPTDPHRPALARL*RSPSSC
Trigger: ACAGGATGACGGGGACCTCAACAGCCTGGCCAGTGC...AGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTGGCAGCCTCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 90 bp TCGAGCCCGAAGAGTTCCTCCACTTGCTGCCGTGACACCTCGATCTaGACCTCTCGCACCCGCAAGCCTGTGGCCTCATCCAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SSPKSSSTCCRDTSI*TSRTRKPVASSRLS
Trigger: GGAGAGCCTGGATGAGGCCACAGGCTTGCGGGTGCGAGAGGTGCAGATCGAGGTGTCACGGCAGCAAGTGGAGGAACTCTTCGGGCTCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 90 bp CCAGCACTGGCCGTTAGGTCTGGAGGGGCGGACGGGTGCAGGAGCTaGGGGTTGTTGGGCCTTGCAGTCTTGAAGTTGACAGGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: PALAVRSGGADGCRS*GLLGLAVLKLTGWK
Trigger: CTTCCACCCTGTCAACTTCAAGACTGCAAGGCCCAACAACCCGCAGCTCCTGCACCCGTCCGCCCCTCCAGACCTAACGGCCAGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp CAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGTGGTCACAGGCATGGGTGGTGATGGCATaGCCCGGGGCAGAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: QASLHRLLLIPTGLWSQAWVVMA*PGAEQR
Trigger: TCTCTGCTCTGCCCCGGGCAATGCCATCACCACCCA...TGCCTGTGACCACAGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp ACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTAACAGCCTCCAGTCGTaGCCCCGGGAGTTGGGGGCG +
Preference number: 5 (lower is better)
Translates to: TGLRVVCCRRGKPLAFSCNSLQS*PRELGA
Trigger: CGCCCCCAACTCCCGGGGCAACGACTGGAGGCTGTT...ACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACCCTCAGCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 90 bp GGTGCAGAGGGCTGGGGCGAAGATGGCCAGCTGGAGCCGCTTGACTaGAGAGCGAGAGTAGGACTCGCCCATGAATACGTAGGTACCCAG +
Preference number: 5 (lower is better)
Translates to: GAEGWGEDGQLEPLD*RARVGLAHEYVGTQ
Trigger: CTGGGTACCTACGTATTCATGGGCGAGTCCTACTCTCGCTCTGCAGTCAAGCGGCTCCAGCTGGCCATCTTCGCCCCAGCCCTCTGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAGCACTGGCCAGGCTGTaGAGGTCCCCGTCATCCTGT +
Preference number: 5 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGALARL*RSPSSC
Trigger: ACAGGATGACGGGGACCTCAACAGCCTGGCCAGTGC...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 90 bp GGCCATGAGAACCGCTACCACCACAAAGACGGCCACCACAAGGCCTaGGTACAGTGCCACATCTCCCGATGTCTCCAGGGTCAGCACGCA +
Preference number: 5 (lower is better)
Translates to: GHENRYHHKDGHHKA*VQCHISRCLQGQHA
Trigger: TGCGTGCTGACCCTGGAGACATCGGGAGATGTGGCACTGTACGCAGGCCTTGTGGTGGCCGTCTTTGTGGTGGTAGCGGTTCTCATGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp CAGAAATACCCTGCAGGACCCAGCAACGCCAAGCTGGCTAGGAATGGGAAGGGGGTGGTGCTCCGGCGCTaGGCCACGATATTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: QKYPAGPSNAKLARNGKGVVLRR*ATIFLA
Trigger: GGCCAAGAATATCGTGGCCAAGCGCCGGAGCACCAC...CCCCTTCCCATTCCTAGCCAGCTTGGCGTTGCTGGGTCCTGCAGGGTATTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CAA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGACCTCGGCCACAGCGATaGGAACAGGGTGACCACTCT +
Preference number: 5 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGPRPQR*EQGDHS
Trigger: AGAGTGGTCACCCTGTTCCAATCGCTGTGGCCGAGG...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGACAGAAGGCGCCTCCATaGAGTGGGGCTGGATTGGTG +
Preference number: 5 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGQKAPP*SGAGLV
Trigger: CACCAATCCAGCCCCACTCAATGGAGGCGCCTTCTG...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp TCTCGGATGCCTGGGAGCCTCAAGATGGGGGACCAGAGAGCCCTGAAAGATCCAGTCCCCGTCATCCTGTaGCCGAGCTTCCCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: SRMPGSLKMGDQRALKDPVPVIL*PSFPEV
Trigger: GACCTCTGGGAAGCTCGGCAACAGGATGACGGGGAC...TGGATCTTTCAGGGCTCTCTGGTCCCCCATCTTGAGGCTCCCAGGCATCCGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS TCA 90 bp CGAAGTCCCGGCAGTTTCTCCGGTATACGATCACTCCCACGGCCATaGGAACCGCTACCACCACAAAGACGGCCACCACAAGGCCTGCGT +
Preference number: 5 (lower is better)
Translates to: RSPGSFSGIRSLPRP*EPLPPQRRPPQGLR
Trigger: ACGCAGGCCTTGTGGTGGCCGTCTTTGTGGTGGTAGCGGTTCTCATGGCCGTGGGAGTGATCGTATACCGGAGAAACTGCCGGGACTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 90 bp GGCCATGAGAACCGCTACCACCACAAAGACGGCCACCACAAGGCCTaGGTACAGTGCCACATCTCCCGATGTCTCCAGGGGGTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: GHENRYHHKDGHHKA*VQCHISRCLQGVAF
Trigger: AAAAGCCACCCCCTGGAGACATCGGGAGATGTGGCACTGTACGCAGGCCTTGTGGTGGCCGTCTTTGTGGTGGTAGCGGTTCTCATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CAA 90 bp CTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGTTAGTCATGGGGATCTaGTCGGCGGAGTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LWVPKVTGLRVVCCRRGKLVMGI*SAESCR
Trigger: CCTGCAGGACTCCGCCGACAAGATCCCCATGACTAA...CTTTCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp GTGCAGAGGCTGCCAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTGGAATCTCCTGGTACTaGGCCAGTAGTTTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: VQRLPGLLAPSPTDPHRPGISWY*ASSLLL
Trigger: GAGGAGCAAACTACTGGCCAAGTACCAGGAGATTCC...AGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTGGCAGCCTCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp TGGGCCAGAGGATCCCGGCCTCTTGGCAGTAGAGCACAGAGACTTTCTAAGGCTCCTCGGCCACAGCGATaGGAACAGGGTGACCACTCT +
Preference number: 5 (lower is better)
Translates to: WARGSRPLGSRAQRLSKAPRPQR*EQGDHS
Trigger: AGAGTGGTCACCCTGTTCCAATCGCTGTGGCCGAGG...AGCCTTAGAAAGTCTCTGTGCTCTACTGCCAAGAGGCCGGGATCCTCTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp GAGCCCCACTTCAGGAAAACCAGGGCAGAGATGCTTGCTGGGTCTGTGGCCATGTTAGTCATGGGGATCTaGTCGGCGGAGTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: EPHFRKTRAEMLAGSVAMLVMGI*SAESCR
Trigger: CCTGCAGGACTCCGCCGACAAGATCCCCATGACTAA...CATGGCCACAGACCCAGCAAGCATCTCTGCCCTGGTTTTCCTGAAGTGGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CAA 90 bp CTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAAAGTACTTGGCCAGTAGTTaGCTCCTCCAGTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: LWVPKVTGLRVVCCRRGKYLASS*LLQWAW
Trigger: CCATGCCCACTGGAGGAGCAAACTACTGGCCAAGTA...CTTTCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGATACTTGGCCAGTAGTTaGCTCCTCCAGTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGYLASS*LLQWAW
Trigger: CCATGCCCACTGGAGGAGCAAACTACTGGCCAAGTA...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp AGAGCCCTGAAAGATCCAGGGATAAGAAGGGTCCCTGTCCCTCAAGGGGTATGGTGGGTGGTGATGGCATaGCCCGGGGCAGAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: RALKDPGIRRVPVPQGVWWVVMA*PGAEQR
Trigger: TCTCTGCTCTGCCCCGGGCAATGCCATCACCACCCA...CCATACCCCTTGAGGGACAGGGACCCTTCTTATCCCTGGATCTTTCAGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CAA 90 bp ACCTCTGAGGGTGGGAGGAAGGTGCTGTCTCGGATGCCTGGGAGCCTCAAGATGGCTGCTGCAGATCTTTaGGCGGATGGACAGGGGTAT +
Preference number: 5 (lower is better)
Translates to: TSEGGRKVLSRMPGSLKMAAADL*ADGQGY
Trigger: ATACCCCTGTCCATCCGCCAAAAGATCTGCAGCAGC...CATCTTGAGGCTCCCAGGCATCCGAGACAGCACCTTCCTCCCACCCTCAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CAA 90 bp GTCCCCTGCATATCAGAACCCACAGACACACAGCCATGTCCACACCCCGGCACCACCAGCATCTCACTCTaGCCCATCTCCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: VPCISEPTDTQPCPHPGTTSISL*PISSKA
Trigger: TGCCTTGGAGGAGATGGGCAAGAGTGAGATGCTGGT...GGTGCCGGGGTGTGGACATGGCTGTGTGTCTGTGGGTTCTGATATGCAGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CAA 90 bp GGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCCTACCAGCATCTCACTCTaGCCCATCTCCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: GGVLSQGKASGFQLSQRPTSISL*PISSKA
Trigger: TGCCTTGGAGGAGATGGGCAAGAGTGAGATGCTGGT...AGGCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp CCTTCTATGTGCGGGCTAACAGTGACCAGTGAGAGTATGCCCACAGGGATGAGCTCCAAGGGTACCTCCTaGGCCAGAGGCTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: PSMCGLTVTSESMPTGMSSKGTS*ARGSWS
Trigger: TGACCAGGAGCCTCTGGCCAAGGAGGTACCCTTGGA...GCTCATCCCTGTGGGCATACTCTCACTGGTCACTGTTAGCCCGCACATAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CAA 90 bp GTGCAGAGGCTGCCAGGCCTCCTTGCACCGTCTCCTACTGATCCCCACAGGCCTATGACATCTTCATTCTaGAGCCATTCCACCTCAGCC +
Preference number: 5 (lower is better)
Translates to: VQRLPGLLAPSPTDPHRPMTSSF*SHSTSA
Trigger: GGCTGAGGTGGAATGGCTCAAGAATGAAGATGTCAT...AGGCCTGTGGGGATCAGTAGGAGACGGTGCAAGGAGGCCTGGCAGCCTCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp GGTGGTGTGTTGTCGCAGGGGAAAGCCTCTGGCTTTCAGCTGTCCCAGAGGCCTTTGGGCCTTGCAGTCTaGAAGTTGACAGGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: GGVLSQGKASGFQLSQRPLGLAV*KLTGWK
Trigger: CTTCCACCCTGTCAACTTCAAGACTGCAAGGCCCAA...AGGCCTCTGGGACAGCTGAAAGCCAGAGGCTTTCCCCTGCGACAACACACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp AACCTGTGGGTCCCCAAAGTCACAGGGCTGAGGGTGGTGTGTTGTCGCAGGGGAGGAATCTCCTGGTACTaGGCCAGTAGTTTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: NLWVPKVTGLRVVCCRRGGISWY*ASSLLL
Trigger: GAGGAGCAAACTACTGGCCAAGTACCAGGAGATTCC...TCCCCTGCGACAACACACCACCCTCAGCCCTGTGACTTTGGGGACCCACAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 90 bp TCCAGACGTGGTAGAAGGGAATCTCCTGGTACTTGGCCAGTAGTTTaGTCCTCCAGTGGGCATGGGGGATGTCATGGAGGGAGAGGCGTA +
Preference number: 5 (lower is better)
Translates to: SRRGRRESPGTWPVV*SSSGHGGCHGGRGV
Trigger: TACGCCTCTCCCTCCATGACATCCCCCATGCCCACTGGAGGAGCAAACTACTGGCCAAGTACCAGGAGATTCCCTTCTACCACGTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS CCA 90 bp AGTAGGCCTGTGGGCCCACAGGTCACCGAGGGGCTCAATACTGTCTaGGAACCTTCTGAAAGTGGGAGGGTGCTTTCGGCCTTGTTGATA +
Preference number: 5 (lower is better)
Translates to: SRPVGPQVTEGLNTV*EPSESGRVLSALLI
Trigger: TATCAACAAGGCCGAAAGCACCCTCCCACTTTCAGAAGGTTCCCAGACAGTATTGAGCCCCTCGGTGACCTGTGGGCCCACAGGCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp CAGAAATACCCTGCAGGACCCAGCAACGCCAAGCTGGCTAGGAATGGGAAGGGGTTGGGCCTTGCAGTCTaGAAGTTGACAGGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: QKYPAGPSNAKLARNGKGLGLAV*KLTGWK
Trigger: CTTCCACCCTGTCAACTTCAAGACTGCAAGGCCCAA...CCCCTTCCCATTCCTAGCCAGCTTGGCGTTGCTGGGTCCTGCAGGGTATTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CAA 90 bp GCACAAACCTGGGCACAGAGGTCATGTCCACATGTGGGGATAGGTGTGCGTGTTTGGCGGATGATGAGGTaGTGGTCAATGGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: AQTWAQRSCPHVGIGVRVWRMMR*WSMVSR
Trigger: CCTGCTCACCATTGACCACAACCTCATCATCCGCCA...AACACGCACACCTATCCCCACATGTGGACATGACCTCTGTGCCCAGGTTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS-3UTR CAA 90 bp CTCAGAGCCCCACTTCAGGAAAACCAGGGCAGAGATGCTTGCTGGGTCTGTGGCATGACATCTTCATTCTaGAGCCATTCCACCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LRAPLQENQGRDACWVCGMTSSF*SHSTSA
Trigger: GGCTGAGGTGGAATGGCTCAAGAATGAAGATGTCAT...GCCACAGACCCAGCAAGCATCTCTGCCCTGGTTTTCCTGAAGTGGGGCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS TCA 90 bp CTGTCTGGGAACCTTCTGAAAGTGGGAGGGTGCTTTCGGCCTTGTTaGTATGTAGATACAGGTCATAGAACTTGCCCTGGGGAATGGCTC +
Preference number: 5 (lower is better)
Translates to: LSGNLLKVGGCFRPC*YVDTGHRTCPGEWL
Trigger: GAGCCATTCCCCAGGGCAAGTTCTATGACCTGTATCTACATATCAACAAGGCCGAAAGCACCCTCCCACTTTCAGAAGGTTCCCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp CTGGATAATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTAGTCCCCGTCATCCTGTaGCCGAGCTTCCCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: LDNKSFAFPKKLGLSLPLVPVIL*PSFPEV
Trigger: GACCTCTGGGAAGCTCGGCAACAGGATGACGGGGAC...TAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATTATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp TCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTTTGCTCGCTGCTGCAGATCTTTaGGCGGATGGACAGGGGTAT +
Preference number: 5 (lower is better)
Translates to: SFAFPKKLGLSLPLLFLLAAADL*ADGQGY
Trigger: ATACCCCTGTCCATCCGCCAAAAGATCTGCAGCAGC...GAGCAAAAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS-3UTR CAA 90 bp AATAAATCATTTGCGTTCCCTAAGAAACTGGGTCTTTCTTTGCCCTTACTGTTTTCCAAGGGTACCTCCTaGGCCAGAGGCTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: NKSFAFPKKLGLSLPLLFSKGTS*ARGSWS
Trigger: TGACCAGGAGCCTCTGGCCAAGGAGGTACCCTTGGA...AAACAGTAAGGGCAAAGAAAGACCCAGTTTCTTAGGGAACGCAAATGATTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 72 bp CTCCGTTCTGGGGTGGCGGTGCCATGCACTCGCGGCTaGGCCAGTGCGCACACTCTGTGCTGCAGGCAGACC +
Preference number: 6 (lower is better)
Translates to: LRSGVAVPCTRG*ASAHTLCCRQT
Trigger: GGTCTGCCTGCAGCACAGAGTGTGCGCACTGGCGCAGCCGCGAGTGCATGGCACCGCCACCCCAGAACGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS CCA 72 bp TCAAGTAGCGTCCCGCTGCAGTCACGGCCTCCGTTCTaGGGTGGCGGTGCCATGCACTCGCGGCTGCGCCAG +
Preference number: 6 (lower is better)
Translates to: SSSVPLQSRPPF*GGGAMHSRLRQ
Trigger: CTGGCGCAGCCGCGAGTGCATGGCACCGCCACCCCAGAACGGAGGCCGTGACTGCAGCGGGACGCTACTTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS CCA 72 bp GCAGGGCATACACAGGCCCGCGGTAGATGCCAGCACTaGCCGTTAGGTCTGGAGGGGCGGACGGGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: AGHTQARGRCQH*PLGLEGRTGAG
Trigger: TCCTGCACCCGTCCGCCCCTCCAGACCTAACGGCCAGTGCTGGCATCTACCGCGGGCCTGTGTATGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 72 bp GGAAATGGGTGTCCCGGGAGAAATCGCCTGGGTACGTaGCCGGCGGGAGGACACCCAGCAGGTCGGCTCCAT +
Preference number: 6 (lower is better)
Translates to: GNGCPGRNRLGT*PAGGHPAGRLH
Trigger: ATGGAGCCGACCTGCTGGGTGTCCTCCCGCCGGGCACGTACCCAGGCGATTTCTCCCGGGACACCCATTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS CCA 72 bp CAGGTGCAGGAAATGGGTGTCCCGGGAGAAATCGCCTaGGTACGTGCCCGGCGGGAGGACACCCAGCAGGTC +
Preference number: 6 (lower is better)
Translates to: QVQEMGVPGEIA*VRARREDTQQV
Trigger: GACCTGCTGGGTGTCCTCCCGCCGGGCACGTACCCAGGCGATTTCTCCCGGGACACCCATTTCCTGCACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS TCA 72 bp GTCCTCGAGCCCGAAGAGTTCCTCCACTTGCTGCCGTaGCACCTCGATCTGCACCTCTCGCACCCGCAAGCC +
Preference number: 6 (lower is better)
Translates to: VLEPEEFLHLLP*HLDLHLSHPQA
Trigger: GGCTTGCGGGTGCGAGAGGTGCAGATCGAGGTGTCACGGCAGCAAGTGGAGGAACTCTTCGGGCTCGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS TCA 72 bp CTTCCCCTTCGACCTGCCGCACGCAGACCTTACAGGTaGACTCCGTGGAGGCCAGGCTATGCCTCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LPLRPAARRPYR*TPWRPGYASPG
Trigger: CCCTGGAGAGGCATAGCCTGGCCTCCACGGAGTTCACCTGTAAGGTCTGCGTGCGGCAGGTCGAAGGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 72 bp GCCAGTGCGCACACTCTGTGCTGCAGGCAGACCACTTaGTCCACTCGGTCCACGCTCCATCCACTGGGCACA +
Preference number: 6 (lower is better)
Translates to: ASAHTLCCRQTT*STRSTLHPLGT
Trigger: TGTGCCCAGTGGATGGAGCGTGGACCGAGTGGAGCAAGTGGTCTGCCTGCAGCACAGAGTGTGCGCACTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS CCA 72 bp TGGGAACCAAGGCTGGCACTGCGCAGGTGCAGGAAATaGGTGTCCCGGGAGAAATCGCCTGGGTACGTGCCC +
Preference number: 6 (lower is better)
Translates to: WEPRLALRRCRK*VSREKSPGYVP
Trigger: GGGCACGTACCCAGGCGATTTCTCCCGGGACACCCATTTCCTGCACCTGCGCAGTGCCAGCCTTGGTTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS CCA 72 bp GAGCCAGCAGGCGTCTCGGCCAACGTTGTGTGCAGCTaGAAAATCTGGCCTTCCCCTTCGACCTGCCGCACG +
Preference number: 6 (lower is better)
Translates to: EPAGVSANVVCS*KIWPSPSTCRT
Trigger: CGTGCGGCAGGTCGAAGGGGAAGGCCAGATTTTCCAGCTGCACACAACGTTGGCCGAGACGCCTGCTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 72 bp CATCAGTGCAGTTCTTGGAGTCAAGTAGCGTCCCGCTaGAGTCACGGCCTCCGTTCTGGGGTGGCGGTGCCA +
Preference number: 6 (lower is better)
Translates to: HQCSSWSQVASR*SHGLRSGVAVP
Trigger: TGGCACCGCCACCCCAGAACGGAGGCCGTGACTGCAGCGGGACGCTACTTGACTCCAAGAACTGCACTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 72 bp GCCGTTAGGTCTGGAGGGGCGGACGGGTGCAGGAGCTaGGGGTTGTTGGGCCTTGCAGTCTTGAAGTTGACA +
Preference number: 6 (lower is better)
Translates to: AVRSGGADGCRS*GLLGLAVLKLT
Trigger: TGTCAACTTCAAGACTGCAAGGCCCAACAACCCGCAGCTCCTGCACCCGTCCGCCCCTCCAGACCTAACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 72 bp TCCAGGGAGCCAGCAGGCGTCTCGGCCAACGTTGTGTaGAGCTGGAAAATCTGGCCTTCCCCTTCGACCTGC +
Preference number: 6 (lower is better)
Translates to: SREPAGVSANVV*SWKIWPSPSTC
Trigger: GCAGGTCGAAGGGGAAGGCCAGATTTTCCAGCTGCACACAACGTTGGCCGAGACGCCTGCTGGCTCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS CCA 72 bp TCCACTCGGTCCACGCTCCATCCACTGGGCACACGGTaGTGCAAGCTGTCTTCTGGAAGGCCTGTCCCTCAC +
Preference number: 6 (lower is better)
Translates to: STRSTLHPLGTR*CKLSSGRPVPH
Trigger: GTGAGGGACAGGCCTTCCAGAAGACAGCTTGCACCACCGTGTGCCCAGTGGATGGAGCGTGGACCGAGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 72 bp ACTCGGTCCACGCTCCATCCACTGGGCACACGGTGGTaGAAGCTGTCTTCTGGAAGGCCTGTCCCTCACAGA +
Preference number: 6 (lower is better)
Translates to: TRSTLHPLGTRW*KLSSGRPVPHR
Trigger: TCTGTGAGGGACAGGCCTTCCAGAAGACAGCTTGCACCACCGTGTGCCCAGTGGATGGAGCGTGGACCGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 72 bp AACCGCTACCACCACAAAGACGGCCACCACAAGGCCTaGGTACAGTGCCACATCTCCCGATGTCTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: NRYHHKDGHHKA*VQCHISRCLQG
Trigger: CCCCTGGAGACATCGGGAGATGTGGCACTGTACGCAGGCCTTGTGGTGGCCGTCTTTGTGGTGGTAGCGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077925.7
CDS GCA 72 bp GGCTGGGGCGAAGATGGCCAGCTGGAGCCGCTTGACTaGAGAGCGAGAGTAGGACTCGCCCATGAATACGTA +
Preference number: 6 (lower is better)
Translates to: GWGEDGQLEPLD*RARVGLAHEYV
Trigger: TACGTATTCATGGGCGAGTCCTACTCTCGCTCTGCAGTCAAGCGGCTCCAGCTGGCCATCTTCGCCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS CCA 72 bp GTGGGCCCACAGGTCACCGAGGGGCTCAATACTGTCTaGGAACCTTCTGAAAGTGGGAGGGTGCTTTCGGCC +
Preference number: 6 (lower is better)
Translates to: VGPQVTEGLNTV*EPSESGRVLSA
Trigger: GGCCGAAAGCACCCTCCCACTTTCAGAAGGTTCCCAGACAGTATTGAGCCCCTCGGTGACCTGTGGGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 72 bp GTGTGCAGCTGGAAAATCTGGCCTTCCCCTTCGACCTaGCGCACGCAGACCTTACAGGTGAACTCCGTGGAG +
Preference number: 6 (lower is better)
Translates to: VCSWKIWPSPST*RTQTLQVNSVE
Trigger: CTCCACGGAGTTCACCTGTAAGGTCTGCGTGCGGCAGGTCGAAGGGGAAGGCCAGATTTTCCAGCTGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 72 bp AACCGCTACCACCACAAAGACGGCCACCACAAGGCCTaGGTACAGTGCCACATCTCCCGATGTCTCCAGGGT +
Preference number: 6 (lower is better)
Translates to: NRYHHKDGHHKA*VQCHISRCLQG
Trigger: ACCCTGGAGACATCGGGAGATGTGGCACTGTACGCAGGCCTTGTGGTGGCCGTCTTTGTGGTGGTAGCGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218637.2
CDS CCA 72 bp CTGCGTGGCAGGGAAGGCTCTGCAGTGCAGTTCCACTaGCTTGTTCTTTACGATGTAGGCGTCCTGTGGCTC +
Preference number: 6 (lower is better)
Translates to: LRGREGSAVQFH*LVLYDVGVLWL
Trigger: GAGCCACAGGACGCCTACATCGTAAAGAACAAGCCAGTGGAACTGCACTGCAGAGCCTTCCCTGCCACGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS CCA 72 bp TGGTACTTGGCCAGTAGTTTGCTCCTCCAGTGGGCATaGGGGATGTCATGGAGGGAGAGGCGTAGGTTGTGG +
Preference number: 6 (lower is better)
Translates to: WYLASSLLLQWA*GMSWRERRRLW
Trigger: CCACAACCTACGCCTCTCCCTCCATGACATCCCCCATGCCCACTGGAGGAGCAAACTACTGGCCAAGTACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS GCA 72 bp GGTAGAAGGGAATCTCCTGGTACTTGGCCAGTAGTTTaGTCCTCCAGTGGGCATGGGGGATGTCATGGAGGG +
Preference number: 6 (lower is better)
Translates to: GRRESPGTWPVV*SSSGHGGCHGG
Trigger: CCCTCCATGACATCCCCCATGCCCACTGGAGGAGCAAACTACTGGCCAAGTACCAGGAGATTCCCTTCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS CCA 72 bp CATTCCAGACGTGGTAGAAGGGAATCTCCTGGTACTTaGCCAGTAGTTTGCTCCTCCAGTGGGCATGGGGGA +
Preference number: 6 (lower is better)
Translates to: HSRRGRRESPGT*PVVCSSSGHGG
Trigger: TCCCCCATGCCCACTGGAGGAGCAAACTACTGGCCAAGTACCAGGAGATTCCCTTCTACCACGTCTGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS TCA 72 bp GGTCACCGAGGGGCTCAATACTGTCTGGGAACCTTCTaGAAGTGGGAGGGTGCTTTCGGCCTTGTTGATATG +
Preference number: 6 (lower is better)
Translates to: GHRGAQYCLGTF*KWEGAFGLVDM
Trigger: CATATCAACAAGGCCGAAAGCACCCTCCCACTTTCAGAAGGTTCCCAGACAGTATTGAGCCCCTCGGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS TCA 72 bp AGGTTGTGGTCAATGGTGAGCAGGAAGTTAGTGTCCTaGGCGGGGTCAATGACATCTTCATTCTTGAGCCAT +
Preference number: 6 (lower is better)
Translates to: RLWSMVSRKLVS*AGSMTSSFLSH
Trigger: ATGGCTCAAGAATGAAGATGTCATTGACCCCGCTCAGGACACTAACTTCCTGCTCACCATTGACCACAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2
CDS TCA 72 bp AACCTTCTGAAAGTGGGAGGGTGCTTTCGGCCTTGTTaGTATGTAGATACAGGTCATAGAACTTGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: NLLKVGGCFRPC*YVDTGHRTCPG
Trigger: CCCAGGGCAAGTTCTATGACCTGTATCTACATATCAACAAGGCCGAAAGCACCCTCCCACTTTCAGAAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077925.7
ENSMUST00000218637.2