RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UNC13B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028456

Ensembl transcript IDs: ENSMUST00000079978.13, ENSMUST00000107952.9, ENSMUST00000107953.9, ENSMUST00000145899.2, ENSMUST00000163653.8, ENSMUST00000168032.2, ENSMUST00000207569.2, ENSMUST00000207708.2

Found 948 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTGTGTGTTCTAAGCATCACTCCCTGCTTACAGGAGTAGGAAGCTaGCAGTACTCTGGGCAGATAAGACCCCTGGTGCCTGGATTCCAA +
Preference number: 1 (lower is better)
Translates to: CVCSKHHSLLTGVGS*QYSGQIRPLVPGFQ
Trigger: TTGGAATCCAGGCACCAGGGGTCTTATCTGCCCAGAGTACTGCCAGCTTCCTACTCCTGTAAGCAGGGAGTGATGCTTAGAACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR CCA 90 bp TCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATaGAGTCAGCCAGGTACAAGCTCCAGGCATTCTAAACATGTTCTA +
Preference number: 1 (lower is better)
Translates to: STLCVPALASRHCGS*SQPGTSSRHSKHVL
Trigger: TAGAACATGTTTAGAATGCCTGGAGCTTGTACCTGGCTGACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR CCA 90 bp AGAGGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTaGGGAACAGCAGCTGATCACAAAGAAAAGAGGAAGGCCAAAGAC +
Preference number: 1 (lower is better)
Translates to: RGIIVQAPPLCLANP*GTAADHKEKRKAKD
Trigger: GTCTTTGGCCTTCCTCTTTTCTTTGTGATCAGCTGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR TCA 90 bp CCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTaGAGCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTC +
Preference number: 1 (lower is better)
Translates to: PLQKVSCSVSKPCSH*SQTNQSCCSSDSEF
Trigger: GAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGCTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR CCA 90 bp ACATGTTCTAATGAGGAGCACATAAGTGCCTACCTGGACAAAGTGTaGTTTAGAGAAGGGTGGAAGTGGGAAGTGGAATGGACAGTTGTC +
Preference number: 1 (lower is better)
Translates to: TCSNEEHISAYLDKV*FREGWKWEVEWTVV
Trigger: GACAACTGTCCATTCCACTTCCCACTTCCACCCTTCTCTAAACCACACTTTGTCCAGGTAGGCACTTATGTGCTCCTCATTAGAACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR TCA 90 bp AGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTaGCTTATGACAGCCATTCTGAGCAAAGGAATTAGCTCAGTGCCT +
Preference number: 1 (lower is better)
Translates to: RNILLRAPKHHVNLL*LMTAILSKGISSVP
Trigger: AGGCACTGAGCTAATTCCTTTGCTCAGAATGGCTGTCATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR CCA 90 bp ATAATTAAAAACAGCAAAGATGCTTGGTTTGTTTCGTGTGTTGACTaGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTAC +
Preference number: 1 (lower is better)
Translates to: IIKNSKDAWFVSCVD*RIVDNVESLAISGY
Trigger: GTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGCATCTTTGCTGTTTTTAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR TCA 90 bp GACCTGCTGAAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCGGTTGTGACCATAGGTaGGAACAATTCTTTCTAGAC +
Preference number: 2 (lower is better)
Translates to: DLLKGFVSDLPASPQVPSGCDHR*EQFFLD
Trigger: GTCTAGAAAGAATTGTTCTCACCTATGGTCACAACC...GGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTTCAGCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR CCA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATATGTGTGTTCCTGCTCTaGCCAGTCGTCACTGTGGAT +
Preference number: 2 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTICVFLL*PVVTVD
Trigger: ATCCACAGTGACGACTGGCCAGAGCAGGAACACACA...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR CCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCAAGTGGGAAGTGGAATaGACAGTTGTCTACCAAGAA +
Preference number: 2 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVKWEVE*TVVYQE
Trigger: TTCTTGGTAGACAACTGTCCATTCCACTTCCCACTT...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR CCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTCTTAGACATCCTAACTaGGAGAGTCAGCCATTTGAC +
Preference number: 2 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVLRHPN*ESQPFD
Trigger: GTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR GCA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGACAGACAAACCAGTCCTaGTGCTCAAGTGACAGTGAA +
Preference number: 2 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGQTNQS*CSSDSE
Trigger: TTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTG...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR CCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATTGTGTGTTCCTGCTCTaGCCAGTCGTCACTGTGGAT +
Preference number: 2 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNCVFLL*PVVTVD
Trigger: ATCCACAGTGACGACTGGCCAGAGCAGGAACACACA...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR CCA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATAAAGACCCCTGGTGCCTaGATTCCAAAGAAATATTCT +
Preference number: 2 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTIKTPGA*IPKKYS
Trigger: AGAATATTTCTTTGGAATCCAGGCACCAGGGGTCTT...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR CCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATAAGCTGGCAGTACTCTaGGCAGATAAGACCCCTGGT +
Preference number: 2 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNKLAVL*ADKTPG
Trigger: ACCAGGGGTCTTATCTGCCCAGAGTACTGCCAGCTT...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR CAA 90 bp TGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTaGGAAATGTCTGTCCCTCTCTATTTATGGAAAAACCTCTCCATG +
Preference number: 2 (lower is better)
Translates to: WEVEWTVVYQEELTS*EMSVPLYLWKNLSM
Trigger: CATGGAGAGGTTTTTCCATAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR TCA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTAGGTTGTGACCATAGGTaGGAACAATTCTTTCTAGAC +
Preference number: 2 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLGCDHR*EQFFLD
Trigger: GTCTAGAAAGAATTGTTCTCACCTATGGTCACAACC...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR TCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAGCTCATCTGACCTGCTaGAAGGGTTTGTTTCTGACC +
Preference number: 2 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPAHLTC*KGLFLT
Trigger: GGTCAGAAACAAACCCTTTCAGCAGGTCAGATGAGC...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR CCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGGTCCCTCTCTATTTATaGAAAAACCTCTCCATGAAG +
Preference number: 2 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLVPLYL*KNLSMK
Trigger: CTTCATGGAGAGGTTTTTCCATAAATAGAGAGGGAC...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR CCA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAAGTGGGAAGTGGAATaGACAGTTGTCTACCAAGAA +
Preference number: 2 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGKWEVE*TVVYQE
Trigger: TTCTTGGTAGACAACTGTCCATTCCACTTCCCACTT...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR CCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAGGTGGAAGTGGGAAGTaGAATGGACAGTTGTCTACC +
Preference number: 2 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPGGSGK*NGQLST
Trigger: GGTAGACAACTGTCCATTCCACTTCCCACTTCCACC...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR CCA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTCTCCTCCTTTATGCTTaGCCAATCCGTGGGGAACAG +
Preference number: 2 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSLLLYA*PIRGEQ
Trigger: CTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAG...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR CCA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATATCAAGAAAATATCTTTaGATCCTTAGTTGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTISRKYL*ILSWPS
Trigger: TGAAGGCCAACTAAGGATCCAAAGATATTTTCTTGA...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR TCA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATTTCAGCACGTTTCTCTaGAAAGCCATAGTCTTACTG +
Preference number: 2 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYFSTFL*KAIVLL
Trigger: CAGTAAGACTATGGCTTTTCAGAGAAACGTGCTGAA...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR TCA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTTTCAGCACGTTTCTCTaGAAAGCCATAGTCTTACTG +
Preference number: 2 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSFSTFL*KAIVLL
Trigger: CAGTAAGACTATGGCTTTTCAGAGAAACGTGCTGAA...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR CCA 72 bp TGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATaGAGTCAGCCAGGTACAAGCTCCAGGCATTCTAAA +
Preference number: 3 (lower is better)
Translates to: CVPALASRHCGS*SQPGTSSRHSK
Trigger: TTTAGAATGCCTGGAGCTTGTACCTGGCTGACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR CAA 90 bp GACCTGCTGAAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCCCATTATTTTTGGCTTaGTTCAGGGACTACTCAAGA +
Preference number: 3 (lower is better)
Translates to: DLLKGFVSDLPASPQVPSPLFLA*FRDYSR
Trigger: TCTTGAGTAGTCCCTGAACAAAGCCAAAAATAATGG...GGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTTCAGCAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR TCA 72 bp TGTCTGTCCCTCTCTATTTATGGAAAAACCTCTCCATaGAGTAGCGTCCACAGCCCAGCTTCTAGCACCACA +
Preference number: 3 (lower is better)
Translates to: CLSLSIYGKTSP*SSVHSPASSTT
Trigger: TGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAGAGAGGGACAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR CCA 72 bp ATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTaGGGAACAGCAGCTGATCACAAAGAAAAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: IVQAPPLCLANP*GTAADHKEKRK
Trigger: CTTCCTCTTTTCTTTGTGATCAGCTGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR CAA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTAGAAGAGCTGACATCCTaGGAAATGTCTGTCCCTCTC +
Preference number: 3 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLEELTS*EMSVPL
Trigger: GAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTC...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR TCA 72 bp AAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTaGAGCCAGACAAACCAGTCCTGCTGCTCAAGTGAC +
Preference number: 3 (lower is better)
Translates to: KVSCSVSKPCSH*SQTNQSCCSSD
Trigger: GTCACTTGAGCAGCAGGACTGGTTTGTCTGGCTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR TCA 72 bp CTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTaGCTTATGACAGCCATTCTGAGCAAAGGAATTAGC +
Preference number: 3 (lower is better)
Translates to: LLRAPKHHVNLL*LMTAILSKGIS
Trigger: GCTAATTCCTTTGCTCAGAATGGCTGTCATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR GCA 72 bp CAAAGAAAAGAGGAAGGCCAAAGACTAGATGTTTTCTaGAAGGACGACAGCCGGAAGGTTGTGACCATAGGT +
Preference number: 3 (lower is better)
Translates to: QRKEEGQRLDVF*KDDSRKVVTIG
Trigger: ACCTATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCCTTCCTCTTTTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR-3UTR CAA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATTTCAGTTTCCAAGCCTaGTTCTCACTGAAGCCAGAC +
Preference number: 3 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNFSFQA*FSLKPD
Trigger: GTCTGGCTTCAGTGAGAACAAGGCTTGGAAACTGAA...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR CCA 72 bp TCTTACTGCCCCAATTTTCTCCTTAGACATCCTAACTaGGAGAGTCAGCCATTTGACTACAAGGACTCTAAG +
Preference number: 3 (lower is better)
Translates to: SYCPNFLLRHPN*ESQPFDYKDSK
Trigger: CTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAATTGGGGCAGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
3UTR CCA 72 bp AACAGCAAAGATGCTTGGTTTGTTTCGTGTGTTGACTaGCGCATTGTGGACAATGTAGAGTCCTTAGCAATT +
Preference number: 3 (lower is better)
Translates to: NSKDAWFVSCVD*RIVDNVESLAI
Trigger: AATTGCTAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGCATCTTTGCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GACCTGCTGAAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCCTGCAGCGCATGCCTTaGCGGGCAAGGCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: DLLKGFVSDLPASPQVPSLQRMP*RARPQS
Trigger: GCTCTGGGGCCTTGCCCGGCAAGGCATGCGCTGCAG...GGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTTCAGCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GACCTGCTGAAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCTCCACACCAGCCCCCTaGGCAGTCTGTGAGCGCACA +
Preference number: 4 (lower is better)
Translates to: DLLKGFVSDLPASPQVPSSTPAP*AVCERT
Trigger: TGTGCGCTCACAGACTGCCCAGGGGGCTGGTGTGGA...GGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTTCAGCAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGTCAGGCACTTGCCCCTaGAGGGCAGGCAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWSGTCP*RAGRSR
Trigger: GCGCGATCTGCCTGCCCTCCAGGGGCAAGTGCCTGA...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCACACTATCTGCATCCTaGGCCACCGAGGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVTLSAS*ATEALA
Trigger: CGCCAGGGCCTCGGTGGCTCAGGATGCAGATAGTGT...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GACCTGCTGAAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCGAGGTGGGGCGCTATTaGTGGTCTCACTGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: DLLKGFVSDLPASPQVPSEVGRY*WSHCGS
Trigger: ACTACCGCAGTGAGACCAGCAATAGCGCCCCACCTC...GGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTTCAGCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCGGGTACTCAGGCACTTaGCCCTGGAGGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCGYSGT*PWRAGR
Trigger: TCTGCCTGCCCTCCAGGGGCAAGTGCCTGAGTACCC...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCATCAGGCACTTGCCCCTaGAGGGCAGGCAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTASGTCP*RAGRSR
Trigger: GCGCGATCTGCCTGCCCTCCAGGGGCAAGTGCCTGA...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GACCTGCTGAAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCAACAGCCCTTCTGCTTaGGATCTGGCCCTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: DLLKGFVSDLPASPQVPSNSPSA*DLALGR
Trigger: TCTCCCAAGGGCCAGATCTCAAGCAGAAGGGCTGTT...GGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTTCAGCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACCTGCAGCGCATGCCTTaGCGGGCAAGGCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDLQRMP*RARPQS
Trigger: GCTCTGGGGCCTTGCCCGGCAAGGCATGCGCTGCAG...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGACTCGCTGCAGCGCATaGCTTGCCGGGCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQTRCSA*LAGQGP
Trigger: GGGGCCTTGCCCGGCAAGGCATGCGCTGCAGCGAGT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCATAGAGCCCTCCAGCTaGCCCTTCTGGGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCIEPSS*PFWEPL
Trigger: CAGTGGCTCCCAGAAGGGCCAGCTGGAGGGCTCTAT...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCCGCTCGGAACCAGTGTaGTCTGGCCTGGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCRSEPV*SGLGKW
Trigger: CCATTTACCCAGGCCAGAGCACACTGGTTCCGAGCG...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACTGCAGCGCATGCCTTaGCGGGCAAGGCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLALQRMP*RARPQS
Trigger: GCTCTGGGGCCTTGCCCGGCAAGGCATGCGCTGCAG...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCACTCGCTGCAGCGCATaGCTTGCCGGGCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSTRCSA*LAGQGP
Trigger: GGGGCCTTGCCCGGCAAGGCATGCGCTGCAGCGAGT...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCCGTGTGGTAAGGAGGTaGGGCGCTATTGCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCRVVRR*GAIAGL
Trigger: GAGACCAGCAATAGCGCCCCACCTCCTTACCACACG...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GACCTGCTGAAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCACAGGAACAGGGAACTaGTGTACAGAAGCGTTGGGC +
Preference number: 4 (lower is better)
Translates to: DLLKGFVSDLPASPQVPSTGTGN*CTEALG
Trigger: GCCCAACGCTTCTGTACACCAGTTCCCTGTTCCTGT...GGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTTCAGCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACTCAGGCACTTGCCCCTaGAGGGCAGGCAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDSGTCP*RAGRSR
Trigger: GCGCGATCTGCCTGCCCTCCAGGGGCAAGTGCCTGA...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCCTGCTCAAACCACGCTaGGTACTCAGGCACTTGCCC +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCLLKPR*VLRHLP
Trigger: GGGCAAGTGCCTGAGTACCCAGCGTGGTTTGAGCAG...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGCTGCTCAAACCACGCTaGGTACTCAGGCACTTGCCC +
Preference number: 4 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWLLKPR*VLRHLP
Trigger: GGGCAAGTGCCTGAGTACCCAGCGTGGTTTGAGCAG...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCCCTGTGCCCCGAACTTaGCCCAGGATGTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCPVPRT*PRMSAI
Trigger: AATGGCTGACATCCTGGGCCAAGTTCGGGGCACAGG...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTGATCTTCCGGCCCAGTaGGCACCAGCAGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVDLPAQ*APAGTA
Trigger: AGCTGTGCCTGCTGGTGCCCACTGGGCCGGAAGATC...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCCTCTGGCTCTGGCTCTaGCTCTGGCTCGAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCLWLWL*LWLEFK
Trigger: CTTGAACTCGAGCCAGAGCCAGAGCCAGAGCCAGAG...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCCCACCAACTGTTCTGTaGTCCCAGAGGGCAGCGTAC +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCPPTVL*SQRAAY
Trigger: GTACGCTGCCCTCTGGGACCACAGAACAGTTGGTGG...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAACTCGCTGCAGCGCATaGCTTGCCGGGCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLTRCSA*LAGQGP
Trigger: GGGGCCTTGCCCGGCAAGGCATGCGCTGCAGCGAGT...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGGGGTACTCAGGCACTTaGCCCTGGAGGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQGYSGT*PWRAGR
Trigger: TCTGCCTGCCCTCCAGGGGCAAGTGCCTGAGTACCC...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGTCTCCCAAACCAGCCTaGCCATCTTTGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWSPKPA*PSLERL
Trigger: CAGCCTCTCCAAAGATGGCCAGGCTGGTTTGGGAGA...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GACCTGCTGAAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCGAAATCTCCTGCAGTTaGAGTCGGACCTTGGTAACC +
Preference number: 4 (lower is better)
Translates to: DLLKGFVSDLPASPQVPSEISCS*SRTLVT
Trigger: GGTTACCAAGGTCCGACTCCAACTGCAGGAGATTTC...GGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTTCAGCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTAAGCTGGGTGCCCGTCTaGTCAGTGAGTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLSWVPV*SVSGGR
Trigger: CCTGCCCCCACTCACTGACCAGACGGGCACCCAGCT...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCCCTGTCTCATCCATATaGATCTTCCGGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVPVSSI*IFRPSG
Trigger: CCCACTGGGCCGGAAGATCCATATGGATGAGACAGG...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCGTCTGCTCTGTTTCCTaGGGGGCTACAGGTGGATCT +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVVCSVS*GATGGS
Trigger: AGATCCACCTGTAGCCCCCCAGGAAACAGAGCAGAC...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCACTGGGTAAATGGCGATaGTGCGGTCTCCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTALGKWR*CGLLRK
Trigger: CTTCCTGAGGAGACCGCATCATCGCCATTTACCCAG...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGACACTATCTGCATCCTaGGCCACCGAGGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKTLSAS*ATEALA
Trigger: CGCCAGGGCCTCGGTGGCTCAGGATGCAGATAGTGT...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCACACTATCTGCATCCTaGGCCACCGAGGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSTLSAS*ATEALA
Trigger: CGCCAGGGCCTCGGTGGCTCAGGATGCAGATAGTGT...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGCATCCAGGAAGTCCATaGGAGGTCGCAGCACACTAT +
Preference number: 4 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWHPGSP*EVAAHY
Trigger: ATAGTGTGCTGCGACCTCTCATGGACTTCCTGGATG...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GACCTGCTGAAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCTTTCCCAGGAGGAAGTaGAACGTCTCGTTGTACTTG +
Preference number: 4 (lower is better)
Translates to: DLLKGFVSDLPASPQVPSFPRRK*NVSLYL
Trigger: CAAGTACAACGAGACGTTTCACTTCCTCCTGGGAAA...GGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTTCAGCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACGTGCTCTGCTTCCAGTaGGGCCTCTGTGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDVLCFQ*GLCVCA
Trigger: GGCACAGACACAGAGGCCTCACTGGAAGCAGAGCAC...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTGAGGTGGGGCGCTATTaGTGGTCTCACTGCGGTAGT +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVEVGRY*WSHCGS
Trigger: ACTACCGCAGTGAGACCAGCAATAGCGCCCCACCTC...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCTGTTGGCCAGTAAGGTaGTCATCACGGCTGGTACAC +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCCWPVR*SSRLVH
Trigger: GTGTACCAGCCGTGATGAGCACCTTACTGGCCAACA...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGCCTGGCGTTAGGGGATaGATTCCCTGTGCCCCGAAC +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLPGVRG*IPCAPN
Trigger: GTTCGGGGCACAGGGAATGCATCCCCTAACGCCAGG...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTCCTGTGCCCCGAACTTaGCCCAGGATGTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVPVPRT*PRMSAI
Trigger: AATGGCTGACATCCTGGGCCAAGTTCGGGGCACAGG...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAGCTGGGTGCCCGTCTaGTCAGTGAGTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSSWVPV*SVSGGR
Trigger: CCTGCCCCCACTCACTGACCAGACGGGCACCCAGCT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCGCTGGCTCAGCTCCTTaGCAGCAGTTAAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVAGSAP*QQLRSA
Trigger: AGCTGATCTTAACTGCTGCCAAGGAGCTGAGCCAGC...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCGATCTTCCGGCCCAGTaGGCACCAGCAGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLDLPAQ*APAGTA
Trigger: AGCTGTGCCTGCTGGTGCCCACTGGGCCGGAAGATC...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCGGCCGTCAGAAGCTCTaGCTCTGGCTCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLGRQKL*LWLWLW
Trigger: CCAGAGCCAGAGCCAGAGCCAGAGCTTCTGACGGCC...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCAGCAGAGAGCTTCCTTaGCTCACATTACAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCSRELP*LTLQEE
Trigger: CTCCTCCTGTAATGTGAGTCAAGGAAGCTCTCTGCT...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCTACTGGAGCAATAGCTaGGAGGCTTTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCYWSNS*EALLLL
Trigger: GAGGAGAAGCAAAGCCTCTCAGCTATTGCTCCAGTA...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGAGTAAACGAGGGCCCTaGTGCTCAGAAGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQSKRGP*CSEAWG
Trigger: ACCCCAGGCTTCTGAGCATCAGGGCCCTCGTTTACT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp GACCTGCTGAAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCTGGACCCTCAGTTGCTaGATGTTGTTCATCAGGATA +
Preference number: 4 (lower is better)
Translates to: DLLKGFVSDLPASPQVPSWTLSC*MLFIRI
Trigger: TATCCTGATGAACAACATGCAGCAACTGAGGGTCCA...GGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTTCAGCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGAGCTGGACCCTCAGTTaGTGCATGTTGTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWSWTLS*CMLFIR
Trigger: CCTGATGAACAACATGCAGCAACTGAGGGTCCAGCT...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCGGGATGCATTCCCTGTaGCCCGAACTTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLGMHSL*PELGPG
Trigger: TCCTGGGCCAAGTTCGGGGCACAGGGAATGCATCCC...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCAACATACCCGCTGTCTaGCACTTGAGGTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCNIPAV*HLRSLA
Trigger: AGCCAATGACCTCAAGTGGCAGACAGCGGGTATGTT...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGACAGCTGCCCTTAGCTaGCACATCCCTCAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQTAALS*HIPQGH
Trigger: ATGCCCCTGAGGGATGTGGCAGCTAAGGGCAGCTGT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCCTGGATGGCAATTCTTaGTGGGATGCAGGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCLDGNS*WDAGVA
Trigger: TGCTACACCTGCATCCCAGCAAGAATTGCCATCCAG...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGACTGGGCGGCAGCAGTaGGTAATGGCTTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKTGRQQ*VMASSG
Trigger: GCCAGAGGAAGCCATTACCCACTGCTGCCGCCCAGT...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTATCCAGCTGGCCCTTCTaGGAGCCACTGAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLSSWPF*EPLRQG
Trigger: TCCTTGCCTCAGTGGCTCCCAGAAGGGCCAGCTGGA...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGTCCAGCTGGCCCTTCTaGGAGCCACTGAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKSSWPF*EPLRQG
Trigger: TCCTTGCCTCAGTGGCTCCCAGAAGGGCCAGCTGGA...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCACAGACCTCAAAGTTGTaGGGCGTGGTACACGAGATG +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTAQTSKL*GVVHEM
Trigger: CATCTCGTGTACCACGCCCCACAACTTTGAGGTCTG...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACCCTGTGCCCCGAACTTaGCCCAGGATGTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDPVPRT*PRMSAI
Trigger: AATGGCTGACATCCTGGGCCAAGTTCGGGGCACAGG...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTAGCTGGGTGCCCGTCTaGTCAGTGAGTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTSWVPV*SVSGGR
Trigger: CCTGCCCCCACTCACTGACCAGACGGGCACCCAGCT...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCTCCTCCCGTACCATGTaGTCCTTGAGTTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCSSRTM*SLSLES
Trigger: GCTTTCCAAACTCAAGGACCACATGGTACGGGAGGA...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTTCCACACCAGCCCCCTaGGCAGTCTGTGAGCGCACA +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSSTPAP*AVCERT
Trigger: TGTGCGCTCACAGACTGCCCAGGGGGCTGGTGTGGA...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTGATCTTCCGGCCCAGTaGGCACCAGCAGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSDLPAQ*APAGTA
Trigger: AGCTGTGCCTGCTGGTGCCCACTGGGCCGGAAGATC...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACCAGCTGCTGAGTCCCTaGAGGAGGTTTCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDQLLSP*RRFPGG
Trigger: TCCACCAGGAAACCTCCTCCAGGGACTCAGCAGCTG...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCACTGAGCACAGTCACTTaGCTTGGCCACCAACTGTTC +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTALSTVT*LGHQLF
Trigger: GAACAGTTGGTGGCCAAGCCAAGTGACTGTGCTCAG...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTCGCTTCCCAGACATaGGGCGAGAGGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQLASQT*GERETE
Trigger: CTCAGTTTCCCTCTCGCCCCATGTCTGGGAAGCGAG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCAGCCATGATAATGTTCTaGGTTCGGTCCTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTAAMIMF*VRSSAP
Trigger: TGGAGCTGAGGACCGAACTCAGAACATTATCATGGC...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGGCTTTACTCTGGACTTaGTGTCATCATCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWALLWT*CHHPHP
Trigger: GGGATGAGGATGATGACATCAAGTCCAGAGTAAAGC...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCCATGGAAGTATTGCTTaGTGGTGTCCAAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVHGSIA*WCPRPS
Trigger: ACTTGGCCTTGGACACCATCAAGCAATACTTCCATG...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTACTGAGAGCAGACTCTaGATTGAGTCCTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVTESRL*IESCTG
Trigger: GCCTGTGCAGGACTCAATTCAGAGTCTGCTCTCAGT...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCTCCCATATCATCCTCTaGGACAGAAGACGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCSHIIL*DRRRSS
Trigger: GCTACTACGTCTTCTGTCTCAGAGGATGATATGGGA...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGATACAGTCTCTGCCCTaGCCTTATCTGGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQIQSLP*PYLGRG
Trigger: GCCTCTCCCCAGATAAGGTCAGGGCAGAGACTGTAT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGCGCTCGGAACCAGTGTaGTCTGGCCTGGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKRSEPV*SGLGKW
Trigger: CCATTTACCCAGGCCAGAGCACACTGGTTCCGAGCG...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACCTGACCACTTGGAGGTaGCATCCAGGACACTCTGCT +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDLTTWR*HPGHSA
Trigger: AGCAGAGTGTCCTGGATGGCACCTCCAAGTGGTCAG...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATGGGTACTCAGGCACTTaGCCCTGGAGGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNGYSGT*PWRAGR
Trigger: TCTGCCTGCCCTCCAGGGGCAAGTGCCTGAGTACCC...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGGGATGCATTCCCTGTaGCCCGAACTTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLGMHSL*PELGPG
Trigger: TCCTGGGCCAAGTTCGGGGCACAGGGAATGCATCCC...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTACCTGGCGTTAGGGGATaGATTCCCTGTGCCCCGAAC +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLPGVRG*IPCAPN
Trigger: GTTCGGGGCACAGGGAATGCATCCCCTAACGCCAGG...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCACAGCTGCCCTTAGCTaGCACATCCCTCAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSTAALS*HIPQGH
Trigger: ATGCCCCTGAGGGATGTGGCAGCTAAGGGCAGCTGT...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTGGGCTACCTCGTCATTaGTCCTCTGAGACAGAATCC +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVGLPRH*SSETES
Trigger: GGATTCTGTCTCAGAGGAGCAATGACGAGGTAGCCC...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGGCTGAAAATTCCAGCTaGCTTTCCACTTCACCAGAC +
Preference number: 4 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWAENSS*LSTSPD
Trigger: GTCTGGTGAAGTGGAAAGGCAGCTGGAATTTTCAGC...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGGGGAACCACTCTCGTTaGTTTCCAGGTCCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQGNHSR*FPGPQD
Trigger: GTCCTGAGGACCTGGAAAGCAACGAGAGTGGTTCCC...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGTCTCCCAAACCAGCCTaGCCATCTTTGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQSPKPA*PSLERL
Trigger: CAGCCTCTCCAAAGATGGCCAGGCTGGTTTGGGAGA...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCAGTGTGCTCTGGCCTaGGTAAATGGCGATGATGCG +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQQCALA*VNGDDA
Trigger: CGCATCATCGCCATTTACCCAGGCCAGAGCACACTG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTATCCAGCTGGCCCTTCTaGGAGCCACTGAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLSSWPF*EPLRQG
Trigger: TCCTTGCCTCAGTGGCTCCCAGAAGGGCCAGCTGGA...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAATAGAGCCCTCCAGCTaGCCCTTCTGGGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLIEPSS*PFWEPL
Trigger: CAGTGGCTCCCAGAAGGGCCAGCTGGAGGGCTCTAT...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCTCTTGGTGCGCTTCTTaGTTTTCCCAACTTGCACAG +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVSWCAS*FSQLAQ
Trigger: CTGTGCAAGTTGGGAAAACCAAGAAGCGCACCAAGA...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTGGTGCTCATCACGGCTaGTACACCAGGACACATGTA +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVGAHHG*YTRTHV
Trigger: TACATGTGTCCTGGTGTACCAGCCGTGATGAGCACC...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCAACATTTTCTCCAGCTaGACCCTCAGTTGCTGCATG +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCNIFSS*TLSCCM
Trigger: CATGCAGCAACTGAGGGTCCAGCTGGAGAAAATGTT...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCCCATTGCCTCCTGCATaGAAGTATTGCTTGATGGTG +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCPLPPA*KYCLMV
Trigger: CACCATCAAGCAATACTTCCATGCAGGAGGCAATGG...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCCTTATCACTTTGGTGTaGGCCAACCATGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCLITLV*ANHGHF
Trigger: GAAGTGACCATGGTTGGCCCACACCAAAGTGATAAG...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCCTTATCACTTTGGTGTaGGCCAACCATGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVLITLV*ANHGHF
Trigger: GAAGTGACCATGGTTGGCCCACACCAAAGTGATAAG...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACCCTGTCTCATCCATATaGATCTTCCGGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDPVSSI*IFRPSG
Trigger: CCCACTGGGCCGGAAGATCCATATGGATGAGACAGG...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGACAGAATCCGGAGAATaGTCATGCCTGTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWTESGE*SCLSHP
Trigger: TGGATGAGACAGGCATGACCATTCTCCGGATTCTGT...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GACCTGCTGAAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCGAAAGGAAGCCTCTTTaGGTTCCTTTGTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: DLLKGFVSDLPASPQVPSERKPL*VPLSEV
Trigger: AACTTCTGACAAAGGAACCCAAAGAGGCTTCCTTTC...GGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTTCAGCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCATCCTACAGGGTCTCTaGAAGAACCACTCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCILQGL*KNHSES
Trigger: GCTTTCAGAGTGGTTCTTCCAGAGACCCTGTAGGAT...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGTGGGAAGTTGTCCTCTaGCAGGGATCCAGTAGGACC +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQWEVVL*QGSSRT
Trigger: GGTCCTACTGGATCCCTGCCAGAGGACAACTTCCCA...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
3UTR CAA 72 bp AGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTaGTTGGGGATTCAGCACGTTTCTCTGAAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SVHSPASSTTDY*LGIQHVSLKSH
Trigger: ATGGCTTTTCAGAGAAACGTGCTGAATCCCCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCTGCTCCCAGGAAGGCTaGTCACCACGAACTGCTACA +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLCSQEG*SPRTAT
Trigger: TGTAGCAGTTCGTGGTGATCAGCCTTCCTGGGAGCA...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCCAGTGACAGATCACTaGCAAGTGGCAGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQPVTDH*QVAVAS
Trigger: AGAAGCCACTGCCACTTGTCAGTGATCTGTCACTGG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCACTTCTCATGGCACTTaGCTCCACACTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLTSHGT*LHTRCS
Trigger: GCTGCAGCGAGTGTGGAGTCAAGTGCCATGAGAAGT...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATAGATGGTAATTTTGGCTaGCCACTTGGAGGTGCCATC +
Preference number: 4 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTIDGNFG*PLGGAI
Trigger: GATGGCACCTCCAAGTGGTCAGCCAAAATTACCATC...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCAGAGCATAATAGGCATTaGTGTTGGCCAGTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTAEHNRH*CWPVRC
Trigger: GCACCTTACTGGCCAACATCAATGCCTATTATGCTC...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACCATCCAGGAAGTCCATaGGAGGTCGCAGCACACTAT +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDHPGSP*EVAAHY
Trigger: ATAGTGTGCTGCGACCTCTCATGGACTTCCTGGATG...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTGTACCATGTGGTCCTTaGGTTTGGAAAGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVVPCGP*VWKAGS
Trigger: TGAGCCAGCTTTCCAAACTCAAGGACCACATGGTAC...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACCACACTGCTTTGGAGTaGGATTCCGTGTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDHTALE*DSVFPP
Trigger: GGGAGGAAACACGGAATCTCACTCCAAAGCAGTGTG...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGCTACCACTTTCACTGTaGCCTTATGCTCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLLPLSL*PYAPQC
Trigger: GCACTGGGGAGCATAAGGTCACAGTGAAAGTGGTAG...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTACCACTTTCACTGTaGCCTTATGCTCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQLPLSL*PYAPQC
Trigger: GCACTGGGGAGCATAAGGTCACAGTGAAAGTGGTAG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTATCGAGACTCTGATTTaGGCTTCACGAACTCTCGGG +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVIETLI*ASRTLG
Trigger: CCCGAGAGTTCGTGAAGCTCAAATCAGAGTCTCGAT...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCTTGGCCTTGGCATTCTaGGTAACAGTTAAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCLALAF*VTVKGD
Trigger: ATCGCCTTTAACTGTTACTCAGAATGCCAAGGCCAA...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCAATCCAGGATCTGTGTTaGAAGACTGTCAGAGCCATG +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTAIQDLC*KTVRAM
Trigger: CATGGCTCTGACAGTCTTTCAACACAGATCCTGGAT...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCCTGGTTTGGGACTTCTaGAAATTCCAAACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCLVWDF*KFQTAQ
Trigger: CTGAGCTGTTTGGAATTTTCAGAAGTCCCAAACCAG...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCGGAGTGGATGGGAAGTaGAGCTTTGGCCAACTAGCC +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSGVDGK*SFGQLA
Trigger: GGCTAGTTGGCCAAAGCTTCACTTCCCATCCACTCC...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATACACTTCACCAGACTTTaGAAGCTCCTGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTIHFTRL*KLLSTV
Trigger: GACTGTGCTCAGGAGCTTTCAAAGTCTGGTGAAGTG...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCCGAGAGTCAGATCCTaGAGCACAGGCAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTPRVRS*STGSGG
Trigger: GCCTCCACTGCCTGTGCTTCAGGATCTGACTCTCGG...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCAGGTCCTCAGGACTaGTGGACCCATTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLPGPQD*WTHCSP
Trigger: TGGAGAACAATGGGTCCATCAGTCCTGAGGACCTGG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACAAGCTCTCACTTCCCTaGCTTGCTGGACTCTCCACT +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDKLSLP*LAGLST
Trigger: AGTGGAGAGTCCAGCAAGTCAGGGAAGTGAGAGCTT...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCACCAGAAACCACACTaGGCAAGCTCTCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQHQKPH*ASSHFP
Trigger: AGGGAAGTGAGAGCTTGCTCAGTGTGGTTTCTGGTG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGACTGTTTTCATCTGCTaGACATGCGCAACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWTVFIC*TCATLL
Trigger: GAGCAAAGTTGCGCATGTGCAGCAGATGAAAACAGT...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACTGTTGGCCAGTAAGGTaGTCATCACGGCTGGTACAC +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDCWPVR*SSRLVH
Trigger: GTGTACCAGCCGTGATGAGCACCTTACTGGCCAACA...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCACCAAAGTTGGAGGCTaGAAAACGATCAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCTKVGG*KTIRCR
Trigger: TCTGCATCTGATCGTTTTGCAGCCTCCAACTTTGGT...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACTCCTTCAGACTGTCTaGAGCTTCGGAGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLALLQTV*SFGVQL
Trigger: GAGCTGGACTCCGAAGCTGCAGACAGTCTGAAGGAG...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTAGGGATGCATTCCCTGTaGCCCGAACTTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLGMHSL*PELGPG
Trigger: TCCTGGGCCAAGTTCGGGGCACAGGGAATGCATCCC...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTACCTGGCGTTAGGGGATaGATTCCCTGTGCCCCGAAC +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLPGVRG*IPCAPN
Trigger: GTTCGGGGCACAGGGAATGCATCCCCTAACGCCAGG...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTTCGAGGACAGCACACTaGTTTGGAGTGAGATTCCGT +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVSRTAH*FGVRFR
Trigger: ACGGAATCTCACTCCAAAGCAGTGTGCTGTCCTCGA...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTAACATACCCGCTGTCTaGCACTTGAGGTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVNIPAV*HLRSLA
Trigger: AGCCAATGACCTCAAGTGGCAGACAGCGGGTATGTT...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACTCTGTGTCTGTGCCCTaGAAAAGCCCCATGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDSVSVP*KSPMSP
Trigger: AGGAGACATGGGGCTTTTGCAGGGCACAGACACAGA...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTACCCCACTGCACACTTTaGCCAGGGAGCTGCTACCTA +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLPHCTL*PGSCYL
Trigger: TAGGTAGCAGCTCCCTGGGCAAAGTGTGCAGTGGGG...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGAGCCTTTTCCCCACTaGACACTTTGCCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLEPFPH*TLCPGS
Trigger: GCTCCCTGGGCAAAGTGTGCAGTGGGGAAAAGGCTC...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCATGTAGGTCCAATATCTaGCTTCCTCCTCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTACRSNI*LPPLGC
Trigger: ACATCCCAGAGGAGGAAGCCAGATATTGGACCTACA...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATATAGAGCCCTCCAGCTaGCCCTTCTGGGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNIEPSS*PFWEPL
Trigger: CAGTGGCTCCCAGAAGGGCCAGCTGGAGGGCTCTAT...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCTTGGCTTGTAGGCCCTaGGCACAAACCACCGTGATG +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLLACRP*AQTTVM
Trigger: CATCACGGTGGTTTGTGCCCAGGGCCTACAAGCCAA...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACGGTGCTCATCACGGCTaGTACACCAGGACACATGTA +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDGAHHG*YTRTHV
Trigger: TACATGTGTCCTGGTGTACCAGCCGTGATGAGCACC...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTACTGCTCAAACCACGCTaGGTACTCAGGCACTTGCCC +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLLLKPR*VLRHLP
Trigger: GGGCAAGTGCCTGAGTACCCAGCGTGGTTTGAGCAG...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATAAGTGGGCAAGGATGTTaGGGTCTGGACATTCCAACT +
Preference number: 4 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTISGQGC*GLDIPT
Trigger: AGTTGGAATGTCCAGACCCCAACATCCTTGCCCACT...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGGCTGGCTCAGCTCCTTaGCAGCAGTTAAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQAGSAP*QQLRSA
Trigger: AGCTGATCTTAACTGCTGCCAAGGAGCTGAGCCAGC...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTTCCTCCCGTACCATGTaGTCCTTGAGTTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVSSRTM*SLSLES
Trigger: GCTTTCCAAACTCAAGGACCACATGGTACGGGAGGA...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCAGACAGCACACTGCTTTaGAGTGAGATTCCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTADSTLL*SEIPCF
Trigger: GAAACACGGAATCTCACTCCAAAGCAGTGTGCTGTC...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCGGTGTGGGCCAACCATaGTCACTTCCACAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSGVGQP*SLPQKA
Trigger: GGCCTTTTGTGGAAGTGACCATGGTTGGCCCACACC...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCTGTCTCATCCATATaGATCTTCCGGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLAPVSSI*IFRPSG
Trigger: CCCACTGGGCCGGAAGATCCATATGGATGAGACAGG...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCGGGTCATATCTTCCATaGAGCATCTGGACAAATCTC +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCGSYLP*SIWTNL
Trigger: GAGATTTGTCCAGATGCTCCATGGAAGATATGACCC...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCTGAAGCACAGGCAGTaGAGGCCAGAGAAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLLKHRQ*RPEKVG
Trigger: ACCAACCTTCTCTGGCCTCCACTGCCTGTGCTTCAG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
3UTR CAA 72 bp GTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTaGGGGATTCAGCACGTTTCTCTGAAAAGCCATAGT +
Preference number: 4 (lower is better)
Translates to: VHSPASSTTDYL*GIQHVSLKSHS
Trigger: ACTATGGCTTTTCAGAGAAACGTGCTGAATCCCCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGCCTTCCTCATCCGACTaGCGGATTGTCTTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKPSSSD*RIVFSA
Trigger: TGCACTGAAGACAATCCGTCAGTCGGATGAGGAAGG...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACAGCAGAGAGCTTCCTTaGCTCACATTACAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDSRELP*LTLQEE
Trigger: CTCCTCCTGTAATGTGAGTCAAGGAAGCTCTCTGCT...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTAGGGGTCACCATCATCTaGAATCTCCTGCAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLGVTII*NLLQLE
Trigger: CTCCAACTGCAGGAGATTTCAGATGATGGTGACCCC...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCAGTGACAGATCACTaGCAAGTGGCAGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLPVTDH*QVAVAS
Trigger: AGAAGCCACTGCCACTTGTCAGTGATCTGTCACTGG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTACTTCTCATGGCACTTaGCTCCACACTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSTSHGT*LHTRCS
Trigger: GCTGCAGCGAGTGTGGAGTCAAGTGCCATGAGAAGT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGGCCATGATAATGTTCTaGGTTCGGTCCTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQAMIMF*VRSSAP
Trigger: TGGAGCTGAGGACCGAACTCAGAACATTATCATGGC...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCGCTCTTGGAGGGCTCTaGAGTTCTTGCACCTTCATC +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSALGGL*SSCTFI
Trigger: GATGAAGGTGCAAGAACTTCAGAGCCCTCCAAGAGC...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGAAACAAGGCATGCTCTaGTGTCTGCTGGAACCCATC +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLKQGML*CLLEPI
Trigger: GATGGGTTCCAGCAGACATCAGAGCATGCCTTGTTT...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGGTACCATGTGGTCCTTaGGTTTGGAAAGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQVPCGP*VWKAGS
Trigger: TGAGCCAGCTTTCCAAACTCAAGGACCACATGGTAC...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACTCGTCATTGCTCCTCTaGGACAGAATCCGGAGAATG +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDSSLLL*DRIRRM
Trigger: CATTCTCCGGATTCTGTCTCAGAGGAGCAATGACGA...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCGGCACCAGTTCCTTTTaGAGAGTCTCTGGGAGACTC +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLGTSSF*RVSGRL
Trigger: GAGTCTCCCAGAGACTCTTCAAAAGGAACTGGTGCC...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATATTCCTTGTGTTTCTCTaGAGGACGAGCAGATCCAGA +
Preference number: 4 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTIFLVFL*RTSRSR
Trigger: TCTGGATCTGCTCGTCCTTCAGAGAAACACAAGGAA...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCATCCTCACACCCTTCTaGCCACACTGGTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLILTPF*PHWFLS
Trigger: AGAGAGGAACCAGTGTGGTCAGAAGGGTGTGAGGAT...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCAGTGGTCCAGACAGTaGAAGGCAACTGCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLQWSRQ*KATAVL
Trigger: AAGGACAGCAGTTGCCTTTCACTGTCTGGACCACTG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCAAGTCTCAGGCCCTATaGTCACTTCCTCCATCGTGC +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSKSQAL*SLPPSC
Trigger: GCACGATGGAGGAAGTGATCATAGGGCCTGAGACTT...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTATGTTGGCCAGTAAGGTaGTCATCACGGCTGGTACAC +
Preference number: 4 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLCWPVR*SSRLVH
Trigger: GTGTACCAGCCGTGATGAGCACCTTACTGGCCAACA...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGAATCCAAGTTCCGAATaGTGGGCCCTGGTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQNPSSE*WALVPL
Trigger: TAGAGGAACCAGGGCCCAGCATTCGGAACTTGGATT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTCTCCTTCAGACTGTCTaGAGCTTCGGAGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSLLQTV*SFGVQL
Trigger: GAGCTGGACTCCGAAGCTGCAGACAGTCTGAAGGAG...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCAGAAGATTCCTGATTTaGAAAGGTACTGCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVRRFLI*KGTASY
Trigger: GTAGCTGGCAGTACCTTTGCAAATCAGGAATCTTCT...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCATGTAGAAGCCCTGTATaGCCTGGGTCTGGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLACRSPV*PGSGEA
Trigger: TGCTTCTCCAGACCCAGGGCATACAGGGCTTCTACA...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAGGCCTCTGTGTCTGTaGCCTGCAAAAGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSRPLCL*PAKAPC
Trigger: ACATGGGGCTTTTGCAGGGCACAGACACAGAGGCCT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCAGATCCAGACAGGTTaGTGTCTTCACCCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQQIQTG*CLHPSV
Trigger: AACACTGGGGTGAAGACAGCAACCTGTCTGGATCTG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGTCTGGCTTCCTCCTCTaGGATGTCAAAAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKSGFLL*DVKRQL
Trigger: GAGCTGCCTTTTGACATCCCAGAGGAGGAAGCCAGA...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACTCTTCAAAGGAACACTaGGCGGCAGCAGTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDSSKEH*AAAVGN
Trigger: ATTACCCACTGCTGCCGCCCAGTGTTCCTTTGAAGA...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCGTGTGGTAAGGAGGTaGGGCGCTATTGCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNRVVRR*GAIAGL
Trigger: GAGACCAGCAATAGCGCCCCACCTCCTTACCACACG...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCACAGGAACAGGGAACTaGTGTACAGAAGCGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSTGTGN*CTEALG
Trigger: GCCCAACGCTTCTGTACACCAGTTCCCTGTTCCTGT...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCAGAGGGCCCGACGCTCTaGATAATCAAGGTCGTAACT +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLAEGPTL*IIKVVT
Trigger: AGTTACGACCTTGATTATCCAGAGCGTCGGGCCCTC...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGATGGGGTCCTAGGACATaGTCCTTATGCAGCACCAGA +
Preference number: 4 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGWGPRT*SLCSTR
Trigger: TCTGGTGCTGCATAAGGACCATGTCCTAGGACCCCA...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCAAAGTTGTGGGGCGTaGTACACGAGATGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLQSCGA*YTRWGR
Trigger: TCTACCCCATCTCGTGTACCACGCCCCACAACTTTG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTATTGGCTTGTAGGCCCTaGGCACAAACCACCGTGATG +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLLACRP*AQTTVM
Trigger: CATCACGGTGGTTTGTGCCCAGGGCCTACAAGCCAA...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCGCTGGCTCAGCTCCTTaGCAGCAGTTAAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSAGSAP*QQLRSA
Trigger: AGCTGATCTTAACTGCTGCCAAGGAGCTGAGCCAGC...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGTCCTCCCGTACCATGTaGTCCTTGAGTTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQSSRTM*SLSLES
Trigger: GCTTTCCAAACTCAAGGACCACATGGTACGGGAGGA...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTGACAGCACACTGCTTTaGAGTGAGATTCCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVDSTLL*SEIPCF
Trigger: GAAACACGGAATCTCACTCCAAAGCAGTGTGCTGTC...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTGGTGTGGGCCAACCATaGTCACTTCCACAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSGVGQP*SLPQKA
Trigger: GGCCTTTTGTGGAAGTGACCATGGTTGGCCCACACC...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATACTCTTCTTATCACTTTaGTGTGGGCCAACCATGGTC +
Preference number: 4 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTILFLSL*CGPTMV
Trigger: GACCATGGTTGGCCCACACCAAAGTGATAAGAAGAG...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTACCAGCCCCCTTTTCTaGCCGAATGTCCTCGTTAGC +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSTSPLF*PNVLVS
Trigger: GCTAACGAGGACATTCGGCCAGAAAAGGGGGCTGGT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCATCTGGCTGTTTTTGTTaGCCGTGGTTCTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTASGCFC*PWFSSV
Trigger: AACTGATGAGAACCACGGCCAACAAAAACAGCCAGA...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTACTTCTGCTTGAGATCTaGCCCTTGGGAGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLLLLEI*PLGELQ
Trigger: CTGCAGCTCTCCCAAGGGCCAGATCTCAAGCAGAAG...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTAGTCTACAGAAACTACTaGCCTCCTACAAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLVYRNY*PPTRLG
Trigger: GCCCAGCCTTGTAGGAGGCCAGTAGTTTCTGTAGAC...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGATGGTCAGGAGTGGATaGGAAGTGAAGCTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLMVRSG*EVKLWP
Trigger: TGGCCAAAGCTTCACTTCCCATCCACTCCTGACCAT...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGTCATACCTACATCTCTaGCCAGGACCCCTAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQSYLHL*PGPLGK
Trigger: TTTGCCTAGGGGTCCTGGCCAGAGATGTAGGTATGA...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCACCACAACAATCACTaGTTACCCAGGATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQHHNNH*LPRMLL
Trigger: CAGGAGCATCCTGGGTAACCAGTGATTGTTGTGGTG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGGGAAGACCCCTCAAGTaGATGGAGGAGAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQGRPLK*MEERKF
Trigger: GAACTTTCTCTCCTCCATCCACTTGAGGGGTCTTCC...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGACATCTTCATCCTCCTaGGAGTCAGCCAGAACACGT +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQTSSSS*ESARTR
Trigger: ACGTGTTCTGGCTGACTCCCAGGAGGATGAAGATGT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
3UTR CAA 72 bp TACAGAGGAATCATAGTCCAAGCTCCTCCTTTATGCTaGGCCAATCCGTGGGGAACAGCAGCTGATCACAAA +
Preference number: 4 (lower is better)
Translates to: YRGIIVQAPPLC*ANPWGTAADHK
Trigger: TTTGTGATCAGCTGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCCTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCAGCCATGATAATGTTCTaGGTTCGGTCCTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLAAMIMF*VRSSAP
Trigger: TGGAGCTGAGGACCGAACTCAGAACATTATCATGGC...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTGCTCTTGGAGGGCTCTaGAGTTCTTGCACCTTCATC +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSALGGL*SSCTFI
Trigger: GATGAAGGTGCAAGAACTTCAGAGCCCTCCAAGAGC...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTCATCCAGGAAGTCCATaGGAGGTCGCAGCACACTAT +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSHPGSP*EVAAHY
Trigger: ATAGTGTGCTGCGACCTCTCATGGACTTCCTGGATG...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTCACACTGCTTTGGAGTaGGATTCCGTGTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSHTALE*DSVFPP
Trigger: GGGAGGAAACACGGAATCTCACTCCAAAGCAGTGTG...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTGTAAATAAGTCCACCTaGATAGAGACTTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVVNKST*IETSPT
Trigger: CGTGGGAGAAGTCTCTATTCAGGTGGACTTATTTAC...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTCTACCACTTTCACTGTaGCCTTATGCTCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSLPLSL*PYAPQC
Trigger: GCACTGGGGAGCATAAGGTCACAGTGAAAGTGGTAG...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTCGTCATTGCTCCTCTaGGACAGAATCCGGAGAATG +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSSSLLL*DRIRRM
Trigger: CATTCTCCGGATTCTGTCTCAGAGGAGCAATGACGA...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGATGGATTCAGCTTGCTaGAAACAGACTTCACAATTG +
Preference number: 4 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWMDSAC*KQTSQL
Trigger: CAATTGTGAAGTCTGTTTTCAGCAAGCTGAATCCAT...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCACTCGATACCTTGCTATaGTCTTCACTTTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTALDTLL*SSLLVS
Trigger: GGAAACCAAAAGTGAAGATCATAGCAAGGTATCGAG...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCATATTACTGGATTTTCTaGGTCAGGCCACAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTAYYWIF*VRPQES
Trigger: GCTTTCTTGTGGCCTGACTCAGAAAATCCAGTAATA...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGTGGAACCTGGAAAGGTaGGCTGATGACTTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLWNLER*ADDFLG
Trigger: GCCTAAAAAGTCATCAGCTCACCTTTCCAGGTTCCA...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCAAACAGCTCAGTTTTaGGGGGCTGAGATGATGCAG +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLQTAQF*GAEMMQ
Trigger: CTGCATCATCTCAGCCCCTCAAAACTGAGCTGTTTG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTAAACCAAAACCGGAGATaGCTTTGCAGGCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLNQNRR*LCRHLL
Trigger: GAGCAGATGCCTGCAAAGTCATCTCCGGTTTTGGTT...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGGTGTTCTTCAGGTGCTaGAAATTCCAGCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLVFFRC*KFQLPF
Trigger: GAAAGGCAGCTGGAATTTTCAGCACCTGAAGAACAC...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACTCAGCAATCTCAGACTaGAGACGACTGATACCTTGC +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDSAISD*RRLIPC
Trigger: GCAAGGTATCAGTCGTCTTCAGTCTGAGATTGCTGA...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTATCTACATGGAGTTCCTaGGCCTTTTCCCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLSTWSS*AFSPLH
Trigger: GTGCAGTGGGGAAAAGGCTCAGGAACTCCATGTAGA...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGTACCCAGGATGCTCCTaGTGTTCCTTTTACTTCCTC +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQYPGCS*CSFYFL
Trigger: GAGGAAGTAAAAGGAACATCAGGAGCATCCTGGGTA...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTGGGCGAGAGGGAAACTaGGCAGTGAGTTTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSGREGN*AVSLQK
Trigger: CTTTTGCAAACTCACTGCTCAGTTTCCCTCTCGCCC...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAACGGATTGTCTTCAGTaGAATCCACACGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLTDCLQ*NPHGAH
Trigger: GTGGGCACCGTGTGGATTGCACTGAAGACAATCCGT...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATAAAGAGTCATGGGAACTaGCTTGAAGAAAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTIKSHGN*LEERAA
Trigger: AGCAGCTCTTTCTTCAAGGCAGTTCCCATGACTCTT...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGAGGACATGGTCCTTATaGAGCACCAGATCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQRTWSL*STRSEG
Trigger: TCCTTCAGATCTGGTGCTGCATAAGGACCATGTCCT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGCGGTCCTCAGCTCCATaGTTAGAGCTCTTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKRSSAP*LELFSA
Trigger: TGCTGAAAAGAGCTCTAAGCATGGAGCTGAGGACCG...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACTCTCGCTTTAGCCGCTaGTTTACTCTGGACTTGATG +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDSRFSR*FTLDLM
Trigger: CATCAAGTCCAGAGTAAAGCAGCGGCTAAAGCGAGA...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGAATCCAAGTTCCGAATaGTGGGCCCTGGTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKNPSSE*WALVPL
Trigger: TAGAGGAACCAGGGCCCAGCATTCGGAACTTGGATT...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCAATCCAAGTTCCGAATaGTGGGCCCTGGTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSNPSSE*WALVPL
Trigger: TAGAGGAACCAGGGCCCAGCATTCGGAACTTGGATT...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGGCATGCTCTGATGTCTaGTGGAACCCATCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQACSDV*WNPSFL
Trigger: TAAGAAGGATGGGTTCCAGCAGACATCAGAGCATGC...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGAGCTGGACCCTCAGTTaGTGCATGTTGTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKSWTLS*CMLFIR
Trigger: CCTGATGAACAACATGCAGCAACTGAGGGTCCAGCT...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCAGCTGGACCCTCAGTTaGTGCATGTTGTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLSWTLS*CMLFIR
Trigger: CCTGATGAACAACATGCAGCAACTGAGGGTCCAGCT...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTACTCCTTCAGACTGTCTaGAGCTTCGGAGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLLLQTV*SFGVQL
Trigger: GAGCTGGACTCCGAAGCTGCAGACAGTCTGAAGGAG...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCTCGAGGACAGCACACTaGTTTGGAGTGAGATTCCGT +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLSRTAH*FGVRFR
Trigger: ACGGAATCTCACTCCAAAGCAGTGTGCTGTCCTCGA...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCTTTTCTTCAGACCATTaGCTCCTGCATGGAAGTATT +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCFSSDH*LLHGSI
Trigger: AATACTTCCATGCAGGAGGCAATGGTCTGAAGAAAA...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCAACATACCCGCTGTCTaGCACTTGAGGTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLNIPAV*HLRSLA
Trigger: AGCCAATGACCTCAAGTGGCAGACAGCGGGTATGTT...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAACAGCTGCCCTTAGCTaGCACATCCCTCAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPTAALS*HIPQGH
Trigger: ATGCCCCTGAGGGATGTGGCAGCTAAGGGCAGCTGT...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGGGCTACCTCGTCATTaGTCCTCTGAGACAGAATCC +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLGLPRH*SSETES
Trigger: GGATTCTGTCTCAGAGGAGCAATGACGAGGTAGCCC...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGACAGAGGTCGTAAGATaGTTTGTGCCTGAACCTACC +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLTEVVR*FVPEPT
Trigger: GGTAGGTTCAGGCACAAAGCATCTTACGACCTCTGT...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCCGCTGTTTGGATTTGTaGCCCACTCAAATATATTTG +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVRCLDL*PTQIYL
Trigger: CAAATATATTTGAGTGGGGCACAAATCCAAACAGCG...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTTCTAGACTTGTCTaGCAAAAGGTCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLPSRLV*QKVLQL
Trigger: CAGCTGGAGGACCTTTTGGCAGACAAGTCTAGAAGG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTACTGGGCGGCAGCAGTaGGTAATGGCTTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSTGRQQ*VMASSG
Trigger: GCCAGAGGAAGCCATTACCCACTGCTGCCGCCCAGT...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTATCTTCAAAGGAACACTaGGCGGCAGCAGTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLSSKEH*AAAVGN
Trigger: ATTACCCACTGCTGCCGCCCAGTGTTCCTTTGAAGA...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTTGGGGTCCTAGGACATaGTCCTTATGCAGCACCAGA +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSWGPRT*SLCSTR
Trigger: TCTGGTGCTGCATAAGGACCATGTCCTAGGACCCCA...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCGAAATCTCCTGCAGTTaGAGTCGGACCTTGGTAACC +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSEISCS*SRTLVT
Trigger: GGTTACCAAGGTCCGACTCCAACTGCAGGAGATTTC...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACAGATCACTGACAAGTaGCAGTGGCTTCTTCCTTCG +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLAQITDK*QWLLPS
Trigger: CGAAGGAAGAAGCCACTGCCACTTGTCAGTGATCTG...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTACAGATCACTGACAAGTaGCAGTGGCTTCTTCCTTCG +
Preference number: 4 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLQITDK*QWLLPS
Trigger: CGAAGGAAGAAGCCACTGCCACTTGTCAGTGATCTG...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCAGATCACTGACAAGTaGCAGTGGCTTCTTCCTTCG +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLQITDK*QWLLPS
Trigger: CGAAGGAAGAAGCCACTGCCACTTGTCAGTGATCTG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTACAGACCTCAAAGTTGTaGGGCGTGGTACACGAGATG +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLQTSKL*GVVHEM
Trigger: CATCTCGTGTACCACGCCCCACAACTTTGAGGTCTG...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCAACCTCAAAGATCTCTaGTTTATTCCGTTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVNLKDL*FIPFSD
Trigger: ATCCGAGAACGGAATAAACCAGAGATCTTTGAGGTT...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCTTGTGGCACTCAAAATaGAACTTCTCTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVLWHSK*NFSSQT
Trigger: TGTTTGGGAAGAGAAGTTCCATTTTGAGTGCCACAA...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCTTTCTTTACCAAAGTTaGAGGCTGCAAAACGATCAG +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVFLYQS*RLQNDQ
Trigger: CTGATCGTTTTGCAGCCTCCAACTTTGGTAAAGAAA...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCAGTGAGTTGTGTAGCTaGTCCAGCAGTTTTACAAAT +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVSELCS*SSSFTN
Trigger: ATTTGTAAAACTGCTGGACCAGCTACACAACTCACT...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTACCAAGTTCCGAATGCTaGGCCCTGGTTCCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLPSSEC*ALVPLE
Trigger: CTCTAGAGGAACCAGGGCCCAGCATTCGGAACTTGG...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCCAAGTTCCGAATGCTaGGCCCTGGTTCCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTPSSEC*ALVPLE
Trigger: CTCTAGAGGAACCAGGGCCCAGCATTCGGAACTTGG...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCAGTGGGCAAGGATGTTaGGGTCTGGACATTCCAACT +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLSGQGC*GLDIPT
Trigger: AGTTGGAATGTCCAGACCCCAACATCCTTGCCCACT...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGAACATTTTCTCCAGCTaGACCCTCAGTTGCTGCATG +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQNIFSS*TLSCCM
Trigger: CATGCAGCAACTGAGGGTCCAGCTGGAGAAAATGTT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCCATTGCCTCCTGCATaGAAGTATTGCTTGATGGTG +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQPLPPA*KYCLMV
Trigger: CACCATCAAGCAATACTTCCATGCAGGAGGCAATGG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACCTTATCACTTTGGTGTaGGCCAACCATGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDLITLV*ANHGHF
Trigger: GAAGTGACCATGGTTGGCCCACACCAAAGTGATAAG...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCATCCCTTTCTTGCATTTaGAGATCTGCAGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTASLSCI*RSAVSL
Trigger: AAGGGAAACTGCAGATCTCCAAATGCAAGAAAGGGA...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTATGCTGCATGGCTGCTTaGGTTCAATTCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLCCMAA*VQFRQT
Trigger: AGTCTGGCGGAATTGAACCCAAGCAGCCATGCAGCA...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCACATTGTCATCAATGGTaGTCTGTTTGGTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTAHCHQW*SVWSDF
Trigger: GAAGTCTGACCAAACAGACCACCATTGATGACAATG...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTTTGAGATCTGGCCCTTaGGAGAGCTGCAGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSLRSGP*ESCRGF
Trigger: AAAGCCTCTGCAGCTCTCCCAAGGGCCAGATCTCAA...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTGGCCTCCTACAAGGCTaGGCAGTTACTGGAGCAATA +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSGLLQG*AVTGAI
Trigger: TATTGCTCCAGTAACTGCCCAGCCTTGTAGGAGGCC...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCGTCCTCCAGCTGCTTTaGGCTCAGAATATCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSVLQLL*AQNIKS
Trigger: GGACTTGATATTCTGAGCCCAAAGCAGCTGGAGGAC...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTATGCAGCACCAGATCTaGAGGAGGGTGGATTGTAGC +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTMQHQI*RRVDCS
Trigger: GCTACAATCCACCCTCCTTCAGATCTGGTGCTGCAT...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGATGGTAATTTTGGCTaGCCACTTGGAGGTGCCATC +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLDGNFG*PLGGAI
Trigger: GATGGCACCTCCAAGTGGTCAGCCAAAATTACCATC...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCGCTTTACTCTGGACTTaGTGTCATCATCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLALLWT*CHHPHP
Trigger: GGGATGAGGATGATGACATCAAGTCCAGAGTAAAGC...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAAAACAAGGCATGCTCTaGTGTCTGCTGGAACCCATC +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLKQGML*CLLEPI
Trigger: GATGGGTTCCAGCAGACATCAGAGCATGCCTTGTTT...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGTACCATGTGGTCCTTaGGTTTGGAAAGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLVPCGP*VWKAGS
Trigger: TGAGCCAGCTTTCCAAACTCAAGGACCACATGGTAC...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTACACACTGCTTTGGAGTaGGATTCCGTGTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLHTALE*DSVFPP
Trigger: GGGAGGAAACACGGAATCTCACTCCAAAGCAGTGTG...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCCATGGAAGTATTGCTTaGTGGTGTCCAAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSHGSIA*WCPRPS
Trigger: ACTTGGCCTTGGACACCATCAAGCAATACTTCCATG...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGGTAAATAAGTCCACCTaGATAGAGACTTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQVNKST*IETSPT
Trigger: CGTGGGAGAAGTCTCTATTCAGGTGGACTTATTTAC...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCATTTCCCAGGAGGAAGTaGAACGTCTCGTTGTACTTG +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLAFPRRK*NVSLYL
Trigger: CAAGTACAACGAGACGTTTCACTTCCTCCTGGGAAA...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTTTCCCAGGAGGAAGTaGAACGTCTCGTTGTACTTG +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSFPRRK*NVSLYL
Trigger: CAAGTACAACGAGACGTTTCACTTCCTCCTGGGAAA...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTATCGAGACTCTGATTTaGGCTTCACGAACTCTCGGG +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSIETLI*ASRTLG
Trigger: CCCGAGAGTTCGTGAAGCTCAAATCAGAGTCTCGAT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCAGGTTCTGCCATGTCTaGCAGCATCCTTATCATCAG +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSRFCHV*QHPYHQ
Trigger: CTGATGATAAGGATGCTGTCAGACATGGCAGAACCT...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGATCCTCACTTTGATTTaGCTCAGAACCACACCCTTC +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLILTLI*LRTTPF
Trigger: GAAGGGTGTGGTTCTGAGTCAAATCAAAGTGAGGAT...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTAACCAATGTGGATTTTaGAGTGGCAGAAATAAGCCC +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVNQCGF*SGRNKP
Trigger: GGGCTTATTTCTGCCACTTCAAAATCCACATTGGTT...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCACTATGCTTTCTTTATaGGCGGTAGAATCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCTMLSL*AVESSF
Trigger: AAAGGAAGATTCTACCGCTCATAAAGAAAGCATAGT...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCCCCAGGGCTTGTTCCTaGAATTCTGGTAAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSPRACS*NSGKRG
Trigger: TCCTCTTTTACCAGAATTTCAGGAACAAGCCCTGGG...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCATGCAAAGGACAGGAATaGTATCCTTGTGTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTACKGQE*YPCVSS
Trigger: ACTAGAAACACAAGGATATCATTCCTGTCCTTTGCA...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGCTGATCACCACGAACTaGTACAGTTGTGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKLITTN*YSCALH
Trigger: GTGAAGAGCACAACTGTAGCAGTTCGTGGTGATCAG...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCTGATCACCACGAACTaGTACAGTTGTGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLLITTN*YSCALH
Trigger: GTGAAGAGCACAACTGTAGCAGTTCGTGGTGATCAG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCATACTCATTATCATCTaGCAAGGCATTGATTTGCTC +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCILIII*QGIDLL
Trigger: GAGCAAATCAATGCCTTGGCAGATGATAATGAGTAT...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCAAGGACATGGTCCTTATaGAGCACCAGATCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLARTWSL*STRSEG
Trigger: TCCTTCAGATCTGGTGCTGCATAAGGACCATGTCCT...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTATCATCTGAAATCTCCTaGAGTTGGAGTCGGACCTTG +
Preference number: 4 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLSSEIS*SWSRTL
Trigger: CAAGGTCCGACTCCAACTGCAGGAGATTTCAGATGA...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTACGGTCCTCAGCTCCATaGTTAGAGCTCTTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLRSSAP*LELFSA
Trigger: TGCTGAAAAGAGCTCTAAGCATGGAGCTGAGGACCG...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTTCATCTGCTGCACATaGGCAACTTTGCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSFICCT*ATLLTV
Trigger: CACAGTGAGCAAAGTTGCGCATGTGCAGCAGATGAA...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCATTCATCTGCTGCACATaGGCAACTTTGCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLAFICCT*ATLLTV
Trigger: CACAGTGAGCAAAGTTGCGCATGTGCAGCAGATGAA...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCCATCCAGGACACTCTaGTTTACTGTTTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQPSRTL*FTVFIC
Trigger: GCAGATGAAAACAGTAAAGCAGAGTGTCCTGGATGG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATCTGACCACTTGGAGGTaGCATCCAGGACACTCTGCT +
Preference number: 4 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYLTTWR*HPGHSA
Trigger: AGCAGAGTGTCCTGGATGGCACCTCCAAGTGGTCAG...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATACAAAAATGGTCTTGGTaGGCTTCTTGGTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTIQKWSW*ASWFSQ
Trigger: TTGGGAAAACCAAGAAGCGCACCAAGACCATTTTTG...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCGCATGCTCTGATGTCTaGTGGAACCCATCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSACSDV*WNPSFL
Trigger: TAAGAAGGATGGGTTCCAGCAGACATCAGAGCATGC...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTTCGAGGACAGCACACTaGTTTGGAGTGAGATTCCGT +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSSRTAH*FGVRFR
Trigger: ACGGAATCTCACTCCAAAGCAGTGTGCTGTCCTCGA...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTCCGGAGAATGGTCATaGCTGTCTCATCCATATGGA +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSSGEWS*LSHPYG
Trigger: TCCATATGGATGAGACAGGCATGACCATTCTCCGGA...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATGGGCTACCTCGTCATTaGTCCTCTGAGACAGAATCC +
Preference number: 4 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNGLPRH*SSETES
Trigger: GGATTCTGTCTCAGAGGAGCAATGACGAGGTAGCCC...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGGGTGACATACTTTCCTaGTCATCAGAAATGGGGGAA +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQGDILS*SSEMGE
Trigger: TTCCCCCATTTCTGATGAGCAGGAAAGTATGTCACC...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCAGACTTTGCAGGCATCTaGTCTGGGTCTCCTTTATTC +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLADFAGI*SGSPLF
Trigger: GAATAAAGGAGACCCAGAGCAGATGCCTGCAAAGTC...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTACTGCATACAGTCTCTaGCCTGACCTTATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSTAYSL*PDLIWG
Trigger: TCCCCAGATAAGGTCAGGGCAGAGACTGTATGCAGT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTGGTTCAAGTGCTGTTaGAGCTCAGCAATCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSWFKCC*SSAISD
Trigger: GTCTGAGATTGCTGAGCTGCAACAGCACTTGAACCA...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCTGGACTTGGTTCAAGTaGTGTTGCAGCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLWTWFK*CCSSAI
Trigger: GATTGCTGAGCTGCAACAGCACTTGAACCAAGTCCA...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGAAAAGGTCCTCCAGCTaGTTTGGGCTCAGAATATCA +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQKRSSS*FGLRIS
Trigger: TGATATTCTGAGCCCAAAGCAGCTGGAGGACCTTTT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCTTATCTGGTGAACCCTaGAATTTGGCTCTTTTAACA +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCLSGEP*NLALLT
Trigger: TGTTAAAAGAGCCAAATTCCAGGGTTCACCAGATAA...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTATCTGGCTTCCTCCTCTaGGATGTCAAAAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLSGFLL*DVKRQL
Trigger: GAGCTGCCTTTTGACATCCCAGAGGAGGAAGCCAGA...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCACAGTGTGCTCTGGCCTaGGTAAATGGCGATGATGCG +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPQCALA*VNGDDA
Trigger: CGCATCATCGCCATTTACCCAGGCCAGAGCACACTG...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTACAAAGTTGTGGGGCGTaGTACACGAGATGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLQSCGA*YTRWGR
Trigger: TCTACCCCATCTCGTGTACCACGCCCCACAACTTTG...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCAAAGTTGTGGGGCGTaGTACACGAGATGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTQSCGA*YTRWGR
Trigger: TCTACCCCATCTCGTGTACCACGCCCCACAACTTTG...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCAGACCTCAAAGTTGTaGGGCGTGGTACACGAGATG +
Preference number: 4 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNQTSKL*GVVHEM
Trigger: CATCTCGTGTACCACGCCCCACAACTTTGAGGTCTG...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGTCTTGGTGCGCTTCTTaGTTTTCCCAACTTGCACAG +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKSWCAS*FSQLAQ
Trigger: CTGTGCAAGTTGGGAAAACCAAGAAGCGCACCAAGA...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCACTTCAATGATAGTTTaGCCAAGGAAATCATCTGAC +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVTSMIV*PRKSSD
Trigger: GTCAGATGATTTCCTTGGCCAAACTATCATTGAAGT...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGTCATGGCCTGATAAATaGACTCGATGCCATAGCGCA +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKSWPDK*TRCHSA
Trigger: TGCGCTATGGCATCGAGTCCATTTATCAGGCCATGA...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCTCATGGCCTGATAAATaGACTCGATGCCATAGCGCA +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLSWPDK*TRCHSA
Trigger: TGCGCTATGGCATCGAGTCCATTTATCAGGCCATGA...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCGACAGCACACTGCTTTaGAGTGAGATTCCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLDSTLL*SEIPCF
Trigger: GAAACACGGAATCTCACTCCAAAGCAGTGTGCTGTC...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACTCTTCTTATCACTTTaGTGTGGGCCAACCATGGTC +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLALFLSL*CGPTMV
Trigger: GACCATGGTTGGCCCACACCAAAGTGATAAGAAGAG...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCTCTTCTTATCACTTTaGTGTGGGCCAACCATGGTC +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLLFLSL*CGPTMV
Trigger: GACCATGGTTGGCCCACACCAAAGTGATAAGAAGAG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGACAATTCATAGGCCTCTaGACCCTCTTCATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGQFIGL*TLFISQ
Trigger: CTGGGAAATGAAGAGGGTCCAGAGGCCTATGAATTG...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCACAACATATTTCTCTTTaGGTCCCTCAACAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTAQHISL*VPQQRK
Trigger: CTTCCTTTGTTGAGGGACCCAAAGAGAAATATGTTG...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCCAACAAATGATAAACTaGCTGAAGTCTTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVQQMIN*LKSSGV
Trigger: AACTCCAGAAGACTTCAGCCAGTTTATCATTTGTTG...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGGCCCATTGTCATCAATaGTGGTCTGTTTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKAHCHQ*WSVWSD
Trigger: GTCTGACCAAACAGACCACCATTGATGACAATGGGC...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCACAGTCACTTGGCTTaGCCACCAACTGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNHSHLA*PPTVLW
Trigger: CCACAGAACAGTTGGTGGCCAAGCCAAGTGACTGTG...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCTCAAAGCTACAAAGTTaGGGCAGGTCCCCATCTCTT +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLSKLQS*GRSPSL
Trigger: AAGAGATGGGGACCTGCCCCAACTTTGTAGCTTTGA...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGAGGCCAGAGAAGGTTaGTTATTGGCTTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLEAREG*LLACCS
Trigger: TGAGCAGCAAGCCAATAACCAACCTTCTCTGGCCTC...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGAAAATGGGCCTGGCTTaGTTTCTCTCTGAAGGATCT +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQKMGLA*FLSEGS
Trigger: AGATCCTTCAGAGAGAAACCAAGCCAGGCCCATTTT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTACAGAGCCCTGGACTTaGTTCAAGTGCTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTTEPWT*FKCCCS
Trigger: GCTGCAACAGCACTTGAACCAAGTCCAGGGCTCTGT...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACTCTTCTACTGAAAGATaGCTTGCCGTCTGTACTAGC +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDSSTER*LAVCTS
Trigger: GCTAGTACAGACGGCAAGCCATCTTTCAGTAGAAGA...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTTGCTCCCAGGAAGGCTaGTCACCACGAACTGCTACA +
Preference number: 4 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSCSQEG*SPRTAT
Trigger: TGTAGCAGTTCGTGGTGATCAGCCTTCCTGGGAGCA...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTACTTCTCATGGCACTTaGCTCCACACTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSTSHGT*LHTRCS
Trigger: GCTGCAGCGAGTGTGGAGTCAAGTGCCATGAGAAGT...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTGCTTTACTCTGGACTTaGTGTCATCATCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSALLWT*CHHPHP
Trigger: GGGATGAGGATGATGACATCAAGTCCAGAGTAAAGC...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACACACATGTACTTGGATaGCAAACATGCAAAGTGCGT +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDTHVLG*QTCKVR
Trigger: ACGCACTTTGCATGTTTGTCATCCAAGTACATGTGT...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGAGCATAATAGGCATTaGTGTTGGCCAGTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLEHNRH*CWPVRC
Trigger: GCACCTTACTGGCCAACATCAATGCCTATTATGCTC...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTACATGGAAGTATTGCTTaGTGGTGTCCAAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLHGSIA*WCPRPS
Trigger: ACTTGGCCTTGGACACCATCAAGCAATACTTCCATG...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCAGTAAATAAGTCCACCTaGATAGAGACTTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLAVNKST*IETSPT
Trigger: CGTGGGAGAAGTCTCTATTCAGGTGGACTTATTTAC...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGGTAAGTCACATGAAATaGCGCTGTTTGGATTTGTGC +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLVSHMK*RCLDLC
Trigger: GCACAAATCCAAACAGCGTCATTTCATGTGACTTAC...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGTCCTTGCCAAGAACTTaGAGACTATGGGCAGAAATA +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLSLPRT*RLWAEI
Trigger: TATTTCTGCCCATAGTCTTCAAGTTCTTGGCAAGGA...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGCCTCCATTTAAGGTATaGTTGCTCATAGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKPPFKV*LLIVPG
Trigger: GCCTGGAACTATGAGCAATCATACCTTAAATGGAGG...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTAGTCATACTCTCGGGATaGATTAAAGAGGAAGGTTCG +
Preference number: 4 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLVILSG*IKEEGS
Trigger: CGAACCTTCCTCTTTAATTCATCCCGAGAGTATGAC...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATGACAGGTGGACTTGTTaGTTGCTGTACCTGGTGATC +
Preference number: 4 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNDRWTC*LLYLVI
Trigger: GATCACCAGGTACAGCAATCAACAAGTCCACCTGTC...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCAACCACTCTGAAAGCATaGAGTACTCACAGATGGTTC +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLATTLKA*STHRWF
Trigger: GAACCATCTGTGAGTACTTCATGCTTTCAGAGTGGT...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAGAGCAGACTCTGAATTaGGTCCTGCACAGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPEQTLN*VLHRQL
Trigger: AAGCTGCCTGTGCAGGACTCAATTCAGAGTCTGCTC...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGTCAGCCAGAACACGTaGGGACTTATCAAAGACATC +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLVSQNT*GLIKDI
Trigger: GATGTCTTTGATAAGTCCTCACGTGTTCTGGCTGAC...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTTCTATCACTGTTCTCTaGCTGGGAACCACTCTCGTT +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSSITVL*LGTTLV
Trigger: AACGAGAGTGGTTCCCAGTCAGAGAACAGTGATAGA...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTATTCATCTGCTGCACATaGGCAACTTTGCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLFICCT*ATLLTV
Trigger: CACAGTGAGCAAAGTTGCGCATGTGCAGCAGATGAA...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAACTGTTTTCATCTGCTaGACATGCGCAACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGTVFIC*TCATLL
Trigger: GAGCAAAGTTGCGCATGTGCAGCAGATGAAAACAGT...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTCTGACCACTTGGAGGTaGCATCCAGGACACTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSLTTWR*HPGHSA
Trigger: AGCAGAGTGTCCTGGATGGCACCTCCAAGTGGTCAG...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCAAAAATGGTCTTGGTaGGCTTCTTGGTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQQKWSW*ASWFSQ
Trigger: TTGGGAAAACCAAGAAGCGCACCAAGACCATTTTTG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTTCTCGCTTTAGCCGCTaGTTTACTCTGGACTTGATG +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSSRFSR*FTLDLM
Trigger: CATCAAGTCCAGAGTAAAGCAGCGGCTAAAGCGAGA...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCACCAAAGTTGGAGGCTaGAAAACGATCAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLTKVGG*KTIRCR
Trigger: TCTGCATCTGATCGTTTTGCAGCCTCCAACTTTGGT...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACATGCCACATCACTTCTaGACTGACTTTTCCTACGTT +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDMPHHF*TDFSYV
Trigger: AACGTAGGAAAAGTCAGTGCAGAAGTGATGTGGCAT...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGAAGATGTCTGCATACTaGATCAGCACTTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQKMSAY*ISTFPM
Trigger: CATTGGGAAAGTGCTGATGCAGTATGCAGACATCTT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGTGGACCCTCAGTTGCTaGATGTTGTTCATCAGGATA +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKWTLSC*MLFIRI
Trigger: TATCCTGATGAACAACATGCAGCAACTGAGGGTCCA...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGCTGTGTTCCAGGTGCTaGTCTTCACAAATCCATTTT +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLLCSRC*SSQIHF
Trigger: AAAATGGATTTGTGAAGAGCAGCACCTGGAACACAG...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATATTGACATTGGATGAGTaGCATGTTGGTGACATACTT +
Preference number: 4 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTILTLDE*HVGDIL
Trigger: AAGTATGTCACCAACATGGCACTCATCCAATGTCAA...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACTGGTTATTGGCTTGCTaGTCAAAGCTACAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDWLLAC*SKLQSW
Trigger: CCAACTTTGTAGCTTTGAGCAGCAAGCCAATAACCA...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTGACCCCCACACTCTaGAAGAGGATGGATTTTTGC +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTLTPTL*KRMDFC
Trigger: GCAAAAATCCATCCTCTTGCAGAGTGTGGGGGTCAG...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACAAGCAAGAGAGAAGTTaGTTGGTGCTTGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDKQERS*LVLEMS
Trigger: AGACATCTCAAGCACCAAGCAACTTCTCTCTTGCTT...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATGAGGGCCCGACGCTCTaGATAATCAAGGTCGTAACT +
Preference number: 4 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYEGPTL*IIKVVT
Trigger: AGTTACGACCTTGATTATCCAGAGCGTCGGGCCCTC...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTTCAAATTTCCAAAAATaGTCTTGGTGCGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVSNFQK*SWCASW
Trigger: CCAAGAAGCGCACCAAGACCATTTTTGGAAATTTGA...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCATGCAAAGTGCGTCATaGCCTGATAAATGGACTCGA +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLMQSAS*PDKWTR
Trigger: TCGAGTCCATTTATCAGGCCATGACGCACTTTGCAT...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGATGCAAAGTGCGTCATaGCCTGATAAATGGACTCGA +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKMQSAS*PDKWTR
Trigger: TCGAGTCCATTTATCAGGCCATGACGCACTTTGCAT...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTTTTCTTTACCAAAGTTaGAGGCTGCAAAACGATCAG +
Preference number: 4 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVFLYQS*RLQNDQ
Trigger: CTGATCGTTTTGCAGCCTCCAACTTTGGTAAAGAAA...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTCCATTGCCTCCTGCATaGAAGTATTGCTTGATGGTG +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSPLPPA*KYCLMV
Trigger: CACCATCAAGCAATACTTCCATGCAGGAGGCAATGG...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTCAATTCATAGGCCTCTaGACCCTCTTCATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSQFIGL*TLFISQ
Trigger: CTGGGAAATGAAGAGGGTCCAGAGGCCTATGAATTG...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAACAGAATCCGGAGAATaGTCATGCCTGTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLTESGE*SCLSHP
Trigger: TGGATGAGACAGGCATGACCATTCTCCGGATTCTGT...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTACAGAATCCGGAGAATaGTCATGCCTGTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSTESGE*SCLSHP
Trigger: TGGATGAGACAGGCATGACCATTCTCCGGATTCTGT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTCTGAAACTGTACTCTaGCTGTTTTTGTTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSSETVL*LFLLAV
Trigger: CACGGCCAACAAAAACAGCCAGAGTACAGTTTCAGA...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGTATGATCTTCACTTTTaGTTTCCTCTTTCTCGGAAA +
Preference number: 4 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWYDLHF*FPLSRK
Trigger: TTTCCGAGAAAGAGGAAACCAAAAGTGAAGATCATA...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCTTTATCTCAAGAATATaGTTTGGTGTTGGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVFISRI*FGVGLL
Trigger: TAAGAGGCCAACACCAAACCATATTCTTGAGATAAA...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCTTTTGTCAGATTCTTTaGAAAACTGGTCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCFCQIL*KTGLAE
Trigger: TTCTGCAAGACCAGTTTTCCAAAGAATCTGACAAAA...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCTTTTGAAGAGTCTCTaGGAGACTCTTTGGAACCAC +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLLLKSL*ETLWNH
Trigger: GTGGTTCCAAAGAGTCTCCCAGAGACTCTTCAAAAG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTACTTGTGTTTCTAGTGTaGTATTCTCACTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLLVFLV*YSHWLL
Trigger: CAGGAGCCAGTGAGAATACCACACTAGAAACACAAG...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTGGGAAGTGAAGCTTTaGCCAACTAGCCATATTTGG +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSWEVKL*PTSHIW
Trigger: CCAAATATGGCTAGTTGGCCAAAGCTTCACTTCCCA...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTGCAGGCATCTGCTCTaGGTCTCCTTTATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSCRHLL*VSFILF
Trigger: AAAGAGAATAAAGGAGACCCAGAGCAGATGCCTGCA...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCGAGAAGGTTGGTTATTaGCTTGCTGCTCAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSEKVGY*LAAQSY
Trigger: GTAGCTTTGAGCAGCAAGCCAATAACCAACCTTCTC...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCGTTCTGTATGCCTCTTaGATATACCTGTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSVLYAS*IYLLHC
Trigger: GCAGTGCAACAGGTATATCCAAGAGGCATACAGAAC...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTGACCCCTCAAGTGGATaGAGGAGAGAAAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTDPSSG*RRESSP
Trigger: TGGTGAACTTTCTCTCCTCCATCCACTTGAGGGGTC...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTTCACTGTTCTCTGACTaGGAACCACTCTCGTTGCTT +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSSLFSD*EPLSLL
Trigger: AAGCAACGAGAGTGGTTCCCAGTCAGAGAACAGTGA...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTACATCTGCCAAGGCATTaGTTTGCTCCAATTTGTAGG +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLHLPRH*FAPICR
Trigger: CCTACAAATTGGAGCAAATCAATGCCTTGGCAGATG...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTATGCAGCACCAGATCTaGAGGAGGGTGGATTGTAGC +
Preference number: 4 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSMQHQI*RRVDCS
Trigger: GCTACAATCCACCCTCCTTCAGATCTGGTGCTGCAT...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTCCAGTGACAGATCACTaGCAAGTGGCAGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSPVTDH*QVAVAS
Trigger: AGAAGCCACTGCCACTTGTCAGTGATCTGTCACTGG...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAGATGGTAATTTTGGCTaGCCACTTGGAGGTGCCATC +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPDGNFG*PLGGAI
Trigger: GATGGCACCTCCAAGTGGTCAGCCAAAATTACCATC...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCACACATGTACTTGGATaGCAAACATGCAAAGTGCGT +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLTHVLG*QTCKVR
Trigger: ACGCACTTTGCATGTTTGTCATCCAAGTACATGTGT...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATGAGCATAATAGGCATTaGTGTTGGCCAGTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNEHNRH*CWPVRC
Trigger: GCACCTTACTGGCCAACATCAATGCCTATTATGCTC...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATTCGTCATTGCTCCTCTaGGACAGAATCCGGAGAATG +
Preference number: 4 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYSSLLL*DRIRRM
Trigger: CATTCTCCGGATTCTGTCTCAGAGGAGCAATGACGA...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCAGAAAAGTCTCCCATATaGTTGACATTGGATGAGTGC +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLAEKSPI*LTLDEC
Trigger: GCACTCATCCAATGTCAATCATATGGGAGACTTTTC...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGATTTCTGTCAGTGAACTaGATAAAGAACCAACAGCGC +
Preference number: 4 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGFLSVN*IKNQQR
Trigger: GCGCTGTTGGTTCTTTATTCAGTTCACTGACAGAAA...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCTTCCAACTGTGGTCTTaGAGTTGTTGCAAGCATGAT +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLFQLWS*SCCKHD
Trigger: ATCATGCTTGCAACAACTTCAAGACCACAGTTGGAA...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTTCATCTGAAATCTCCTaGAGTTGGAGTCGGACCTTG +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTSSEIS*SWSRTL
Trigger: CAAGGTCCGACTCCAACTGCAGGAGATTTCAGATGA...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTTTCGTAGATCTGGCATaGTGTCAATGCCATAGAGCC +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTFVDLA*CQCHRA
Trigger: GGCTCTATGGCATTGACAGCATGCCAGATCTACGAA...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAACTGTTTTCATCTGCTaGACATGCGCAACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLTVFIC*TCATLL
Trigger: GAGCAAAGTTGCGCATGTGCAGCAGATGAAAACAGT...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCAAAAATGGTCTTGGTaGGCTTCTTGGTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLQKWSW*ASWFSQ
Trigger: TTGGGAAAACCAAGAAGCGCACCAAGACCATTTTTG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTATCTCGCTTTAGCCGCTaGTTTACTCTGGACTTGATG +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLSRFSR*FTLDLM
Trigger: CATCAAGTCCAGAGTAAAGCAGCGGCTAAAGCGAGA...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTACCAAAGTTGGAGGCTaGAAAACGATCAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSTKVGG*KTIRCR
Trigger: TCTGCATCTGATCGTTTTGCAGCCTCCAACTTTGGT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTGCATGCTCTGATGTCTaGTGGAACCCATCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTACSDV*WNPSFL
Trigger: TAAGAAGGATGGGTTCCAGCAGACATCAGAGCATGC...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGAAGATGTCTGCATACTaGATCAGCACTTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: SASAEGILFSFQALFSLKKMSAY*ISTFPM
Trigger: CATTGGGAAAGTGCTGATGCAGTATGCAGACATCTT...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGTTTTCTTCAGACCATTaGCTCCTGCATGGAAGTATT +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLFSSDH*LLHGSI
Trigger: AATACTTCCATGCAGGAGGCAATGGTCTGAAGAAAA...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTTCCGGAGAATGGTCATaGCTGTCTCATCCATATGGA +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTSGEWS*LSHPYG
Trigger: TCCATATGGATGAGACAGGCATGACCATTCTCCGGA...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTATCCGGAGAATGGTCATaGCTGTCTCATCCATATGGA +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLSGEWS*LSHPYG
Trigger: TCCATATGGATGAGACAGGCATGACCATTCTCCGGA...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTTTGTCATTCCTAGCCTaGCAGTCTTGTCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTLSFLA*QSCLLV
Trigger: CACCAGAAGACAAGACTGGCAGGCTAGGAATGACAA...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCATATACCTGTTGCACTaGATGCCATTAACACAGAGG +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSIYLLH*MPLTQR
Trigger: CCTCTGTGTTAATGGCATGCAGTGCAACAGGTATAT...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTTTTACTTCCTCCTaGAACTTAGACACATCACTC +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLPFTSS*NLDTSL
Trigger: GAGTGATGTGTCTAAGTTGCAGGAGGAAGTAAAAGG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATATTATCTGGTGAACCCTaGAATTTGGCTCTTTTAACA +
Preference number: 4 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTILSGEP*NLALLT
Trigger: TGTTAAAAGAGCCAAATTCCAGGGTTCACCAGATAA...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGAACCTCAAAGATCTCTaGTTTATTCCGTTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQNLKDL*FIPFSD
Trigger: ATCCGAGAACGGAATAAACCAGAGATCTTTGAGGTT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTTCTTGGTGCGCTTCTTaGTTTTCCCAACTTGCACAG +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTSWCAS*FSQLAQ
Trigger: CTGTGCAAGTTGGGAAAACCAAGAAGCGCACCAAGA...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTGGTGCTCATCACGGCTaGTACACCAGGACACATGTA +
Preference number: 4 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSGAHHG*YTRTHV
Trigger: TACATGTGTCCTGGTGTACCAGCCGTGATGAGCACC...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATAACATTTTCTCCAGCTaGACCCTCAGTTGCTGCATG +
Preference number: 4 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNNIFSS*TLSCCM
Trigger: CATGCAGCAACTGAGGGTCCAGCTGGAGAAAATGTT...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTAGCAAGACTACTACTCTaGTTGTCCAGGAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLARLLL*LSRRSS
Trigger: TGAGGATCTCCTGGACAACCAGAGTAGTAGTCTTGC...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGGCACTTTGTTGTGGTTaGTCTTTTGATAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLALCCG*SFDRES
Trigger: GCTTTCTCTATCAAAAGACCAACCACAACAAAGTGC...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATTGCTCTACTGCTGCATaGCTGCTTGGGTTCAATTCC +
Preference number: 4 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYCSTAA*LLGFNS
Trigger: GGAATTGAACCCAAGCAGCCATGCAGCAGTAGAGCA...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCACAACTTTGCTTCAACTaGATTATAATCGTTCACACT +
Preference number: 4 (lower is better)
Translates to: GIIVQAPPLCLANPWGTAQLCFN*IIIVHT
Trigger: AGTGTGAACGATTATAATCCAGTTGAAGCAAAGTTG...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCAAGAGGGTCTTCAACTaGTTCTTCTTCAGCATACCA +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLKRVFN*FFFSIP
Trigger: TGGTATGCTGAAGAAGAACCAGTTGAAGACCCTCTT...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCCCAACTAGCCATATTTaGGATCTCAAAACGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSPTSHI*DLKTRS
Trigger: AGACCTCGTTTTGAGATCCCAAATATGGCTAGTTGG...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCATCCCATGGTCAGGAGTaGATGGGAAGTGAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPSHGQE*MGSEAL
Trigger: CAAAGCTTCACTTCCCATCCACTCCTGACCATGGGA...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCACATCCTTAAGAACCTaGGCAGTACAGTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSTSLRT*AVQFSS
Trigger: AGAAGAGAACTGTACTGCCCAGGTTCTTAAGGATGT...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCAAGAGAGAAGTTGCTTaGTGCTTGAGATGTCTGATC +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLKREVA*CLRCLI
Trigger: GATCAGACATCTCAAGCACCAAGCAACTTCTCTCTT...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCATCTGCCAAGGCATTaGTTTGCTCCAATTTGTAGG +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTHLPRH*FAPICR
Trigger: CCTACAAATTGGAGCAAATCAATGCCTTGGCAGATG...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTACACATGTACTTGGATaGCAAACATGCAAAGTGCGT +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSTHVLG*QTCKVR
Trigger: ACGCACTTTGCATGTTTGTCATCCAAGTACATGTGT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAACATCACTTCTGCACTaGCTTTTCCTACGTTCAACT +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLTSLLH*LFLRST
Trigger: AGTTGAACGTAGGAAAAGTCAGTGCAGAAGTGATGT...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAGTCTTGTCTTCTGGTaGTGTAACATAATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGSLVFW*CNIMSA
Trigger: TGCAGACATTATGTTACATCACCAGAAGACAAGACT...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCATCCTCCTTTATGGAGTaGCATGATAATTGCTTACTC +
Preference number: 4 (lower is better)
Translates to: LFMEKPLHEVASTAQLLASSFME*HDNCLL
Trigger: GAGTAAGCAATTATCATGTCACTCCATAAAGGAGGA...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGCTTCTTTTCCTGAGATaGAATCTTTCCACCTTTATC +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLLLFLR*NLSTFI
Trigger: GATAAAGGTGGAAAGATTTCATCTCAGGAAAAGAAG...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGTTTGGTCACAAACCCTaGAATCATTTCTACTTTGGA +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLFGHKP*NHFYFG
Trigger: TCCAAAGTAGAAATGATTTCAGGGTTTGTGACCAAA...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCCTGATGATAAGGTCCTaGTCATCACTAACAACCAAA +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSLMIRS*SSLTTK
Trigger: TTTGGTTGTTAGTGATGATCAGGACCTTATCATCAG...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTTGGATTTTTGCAAGATaGGGTCTCTGTGCTCTAGAT +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSWIFAR*GLCALD
Trigger: ATCTAGAGCACAGAGACCTCATCTTGCAAAAATCCA...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCAGAGCTGGTTTATCCTaGTTTAAAGAGTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSRAGLS*FKEFQL
Trigger: CAGTTGGAACTCTTTAAATCAGGATAAACCAGCTCT...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGTCATTCAGGTCAATATaGACCATGTTACTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQSFRSI*TMLLKV
Trigger: GACTTTGAGTAACATGGTTCATATTGACCTGAATGA...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTAGAACTGCTACAGTTGTaGTCTTCACGTTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLELLQL*SSRSGL
Trigger: AAGTCCAGAACGTGAAGAGCACAACTGTAGCAGTTC...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATTTCGTAGATCTGGCATaGTGTCAATGCCATAGAGCC +
Preference number: 4 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYFVDLA*CQCHRA
Trigger: GGCTCTATGGCATTGACAGCATGCCAGATCTACGAA...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCATTCGTAGATCTGGCATaGTGTCAATGCCATAGAGCC +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPFVDLA*CQCHRA
Trigger: GGCTCTATGGCATTGACAGCATGCCAGATCTACGAA...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCTTTACTGTTTTCATCTaGTGCACATGCGCAACTTTG +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLFTVFI*CTCATL
Trigger: CAAAGTTGCGCATGTGCAGCAGATGAAAACAGTAAA...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCCATCCAGGACACTCTaGTTTACTGTTTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTPSRTL*FTVFIC
Trigger: GCAGATGAAAACAGTAAAGCAGAGTGTCCTGGATGG...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAATGCCACATCACTTCTaGACTGACTTTTCCTACGTT +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLMPHHF*TDFSYV
Trigger: AACGTAGGAAAAGTCAGTGCAGAAGTGATGTGGCAT...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTTGGACCCTCAGTTGCTaGATGTTGTTCATCAGGATA +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTWTLSC*MLFIRI
Trigger: TATCCTGATGAACAACATGCAGCAACTGAGGGTCCA...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTTTTCTTCAGACCATTaGCTCCTGCATGGAAGTATT +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSFSSDH*LLHGSI
Trigger: AATACTTCCATGCAGGAGGCAATGGTCTGAAGAAAA...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTAGTCTGTGTTCCAGGTaGTGCTCTTCACAAATCCAT +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTSLCSR*CSSQIH
Trigger: ATGGATTTGTGAAGAGCAGCACCTGGAACACAGACT...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGTTGCATTTGGAGATCTaGAGTTTCCCTTTTACTTCT +
Preference number: 4 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLLHLEI*SFPFTS
Trigger: AGAAGTAAAAGGGAAACTGCAGATCTCCAAATGCAA...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGAAATCTTCCCTTTCTTaGATTTGGAGATCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQKSSLS*IWRSAV
Trigger: AACTGCAGATCTCCAAATGCAAGAAAGGGAAGATTT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTATTTACTAAGCTGTGGTaGAAGAGGATCTACAATGGA +
Preference number: 4 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLFTKLW*KRIYNG
Trigger: TCCATTGTAGATCCTCTTGCACCACAGCTTAGTAAA...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTTCAAACCATTACTCTaGATCTCCCTGGTTAATGGT +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSFKPLL*ISLVNG
Trigger: ACCATTAACCAGGGAGATGCAGAGTAATGGTTTGAA...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCAAAATCAAAAGCAGTTaGTCCTTCTGCTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLKIKSS*SFCSSF
Trigger: AAAGGAGGAGCAGAAGGAGCAACTGCTTTTGATTTT...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATCATCTCTTCTTGCTTTaGTGGCTGAGCACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYHLFLL*WLSTVF
Trigger: GAACACTGTGCTCAGCCAGCAAAGCAAGAAGAGATG...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTACCATTAACACAGAGGTaGTTTGCTAGAAAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLPLTQR*FARKLS
Trigger: GGACAACTTTCTAGCAAAGCACCTCTGTGTTAATGG...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAAAGAGGATGGATTTTTaGAAGATGAGGTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLKRMDF*KMRSLC
Trigger: GCACAGAGACCTCATCTTGCAAAAATCCATCCTCTT...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTTGTGTTTACCATATCTaGTTTCAGTGGTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSCVYHI*FQWSRQ
Trigger: CTGTCTGGACCACTGAAAGCAGATATGGTAAACACA...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTCAAATTTCCAAAAATaGTCTTGGTGCGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSSNFQK*SWCASW
Trigger: CCAAGAAGCGCACCAAGACCATTTTTGGAAATTTGA...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTTGTGGCACTCAAAATaGAACTTCTCTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSLWHSK*NFSSQT
Trigger: TGTTTGGGAAGAGAAGTTCCATTTTGAGTGCCACAA...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATATGGAAAAGGTTCTCATaGAGACATGTATATTGTACA +
Preference number: 4 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTIWKRFS*RHVYCT
Trigger: TGTACAATATACATGTCTCCATGAGAACCTTTTCCA...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCAGGACACATGTACTTaGATGACAAACATGCAAAGT +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLQDTCT*MTNMQS
Trigger: ACTTTGCATGTTTGTCATCCAAGTACATGTGTCCTG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAGTGAGTTGTGTAGCTaGTCCAGCAGTTTTACAAAT +
Preference number: 4 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGSELCS*SSSFTN
Trigger: ATTTGTAAAACTGCTGGACCAGCTACACAACTCACT...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGATGTGGCAATTTTGTTaGACCTCTTTATCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQMWQFC*TSLSVV
Trigger: AACCACTGATAAAGAGGTCCAACAAAATTGCCACAT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGAATGGCTTCCTCTCTaGATCTTTCTACATGGAGTT +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLEWLPL*IFLHGV
Trigger: AACTCCATGTAGAAAGATCCAGAGAGGAAGCCATTC...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTTCTCTGTGCTCTAGATaGACAAGTTTCACCACAGTA +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSSLCSR*TSFTTV
Trigger: TACTGTGGTGAAACTTGTCCATCTAGAGCACAGAGA...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGTTAAATTTATCTGGTaGACCCTGGAATTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLVKFIW*TLEFGS
Trigger: AGAGCCAAATTCCAGGGTTCACCAGATAAATTTAAC...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATACATCACTTCTGCACTaGCTTTTCCTACGTTCAACT +
Preference number: 4 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNTSLLH*LFLRST
Trigger: AGTTGAACGTAGGAAAAGTCAGTGCAGAAGTGATGT...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAGTCTCCCATATGATTaGCATTGGATGAGTGCCATG +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPSLPYD*HWMSAM
Trigger: CATGGCACTCATCCAATGTCAATCATATGGGAGACT...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAGTTTCCACCAAACACTaGAGCTCATCCATTGTGTCA +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPVSTKH*SSSIVS
Trigger: TGACACAATGGATGAGCTTCAGTGTTTGGTGGAAAC...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTGAAGTGAACAGGAGCTaGCTGAATGATTTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSEVNRS*LNDFLS
Trigger: ACTAAGAAAATCATTCAGTCAGCTCCTGTTCACTTC...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTACACTCAAGATCTTCTaGACAATAGGGTCTCCCTAT +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTTLKIF*TIGSPY
Trigger: ATAGGGAGACCCTATTGTTCAGAAGATCTTGAGTGT...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTTGCAGGTGTAGCAGTTaGAAATTTCCATTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSCRCSS*KFPFLV
Trigger: AACCAAGAATGGAAATTTTCAACTGCTACACCTGCA...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAGCTTTTTGGAAGAATTaGTCCTACAGGGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPAFWKN*SYRVSG
Trigger: TCCAGAGACCCTGTAGGATCAATTCTTCCAAAAAGC...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTATGCCTCATCAAACAGTaGAATACTAGTTTCTACAGA +
Preference number: 4 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLCLIKQ*NTSFYR
Trigger: TCTGTAGAAACTAGTATTTCACTGTTTGATGAGGCA...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCCTTGTCTGCCCTGTTTaGAAATCTGTAATTTTTCAC +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSLVCPV*KSVIFH
Trigger: GTGAAAAATTACAGATTTTCAAACAGGGCAGACAAG...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR GCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAGAACTGCTACAGTTGTaGTCTTCACGTTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPELLQL*SSRSGL
Trigger: AAGTCCAGAACGTGAAGAGCACAACTGTAGCAGTTC...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGAGTCATGGGAACTaGCTTGAAGAAAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPKSHGN*LEERAA
Trigger: AGCAGCTCTTTCTTCAAGGCAGTTCCCATGACTCTT...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATATGCCACATCACTTCTaGACTGACTTTTCCTACGTT +
Preference number: 4 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNMPHHF*TDFSYV
Trigger: AACGTAGGAAAAGTCAGTGCAGAAGTGATGTGGCAT...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGAATAAATATACATACTaGCCAGTAGAATCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: PNWESQPFDYKDSKLATQNKYTY*PVESVR
Trigger: CCTCACTGATTCTACTGGGCAGTATGTATATTTATT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAACCTCAAAGATCTCTaGTTTATTCCGTTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSNLKDL*FIPFSD
Trigger: ATCCGAGAACGGAATAAACCAGAGATCTTTGAGGTT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTATCAAATTTCCAAAAATaGTCTTGGTGCGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLSNFQK*SWCASW
Trigger: CCAAGAAGCGCACCAAGACCATTTTTGGAAATTTGA...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTATTGTGGCACTCAAAATaGAACTTCTCTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLLWHSK*NFSSQT
Trigger: TGTTTGGGAAGAGAAGTTCCATTTTGAGTGCCACAA...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCACTTCAATGATAGTTTaGCCAAGGAAATCATCTGAC +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLTSMIV*PRKSSD
Trigger: GTCAGATGATTTCCTTGGCCAAACTATCATTGAAGT...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACTGGAAAAGGTTCTCATaGAGACATGTATATTGTACA +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDWKRFS*RHVYCT
Trigger: TGTACAATATACATGTCTCCATGAGAACCTTTTCCA...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTATTTCTTTACCAAAGTTaGAGGCTGCAAAACGATCAG +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLFLYQS*RLQNDQ
Trigger: CTGATCGTTTTGCAGCCTCCAACTTTGGTAAAGAAA...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAGTGAGTTGTGTAGCTaGTCCAGCAGTTTTACAAAT +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSSELCS*SSSFTN
Trigger: ATTTGTAAAACTGCTGGACCAGCTACACAACTCACT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTACTGGCTGAAGTCTTCTaGAGTTTCTGGAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLLAEVF*SFWRNL
Trigger: AAGATTTCTCCAGAAACTCCAGAAGACTTCAGCCAG...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACTTTGGTCTCATTAACTaGAAGATAACCAGAATTTCC +
Preference number: 4 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDFGLIN*KITRIS
Trigger: GGAAATTCTGGTTATCTTCCAGTTAATGAGACCAAA...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCAATTTATCTGCATCTTaGTTCTGTAGAAGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLNLSAS*FCRSPV
Trigger: TACAGGGCTTCTACAGAACCAAGATGCAGATAAATT...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
3UTR CAA 72 bp GAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTaGGAAATGTCTGTCCCTCTCTATTTATGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: EWTVVYQEELTS*EMSVPLYLWKN
Trigger: GTTTTTCCATAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATGTTAAATTTATCTGGTaGACCCTGGAATTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNVKFIW*TLEFGS
Trigger: AGAGCCAAATTCCAGGGTTCACCAGATAAATTTAAC...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAACATCACTTCTGCACTaGCTTTTCCTACGTTCAACT +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPTSLLH*LFLRST
Trigger: AGTTGAACGTAGGAAAAGTCAGTGCAGAAGTGATGT...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTTGGGCGATATCTTTCTaGAACTGTACTCTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSWAISF*NCTLAV
Trigger: AACAGCCAGAGTACAGTTTCAGAAAGATATCGCCCA...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGTTGAATTCCTGTTaGCTAGGCATGTTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSKLNSC*LGMFSR
Trigger: TCTAGAAAACATGCCTAGTCAACAGGAATTCAACTT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTACTCAAGATTAATGAGTaGAGACTATCATGTATGGGT +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLLKINE*RLSCMG
Trigger: ACCCATACATGATAGTCTTCACTCATTAATCTTGAG...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATGTCTGCATACTaGATCAGCACTTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPKMSAY*ISTFPM
Trigger: CATTGGGAAAGTGCTGATGCAGTATGCAGACATCTT...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCACCAAAGAGTTTCAGTaGACTTGTAAGCAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSTKEFQ*TCKQSF
Trigger: AAAACTTTGCTTACAAGTGCACTGAAACTCTTTGGT...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGATTATTTTCAGTTGTCTaGATGAGACACACATTGGTT +
Preference number: 4 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGLFSVV*MRHTLV
Trigger: AACCAATGTGTGTCTCATGCAGACAACTGAAAATAA...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTACTTCAATGATAGTTTaGCCAAGGAAATCATCTGAC +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSTSMIV*PRKSSD
Trigger: GTCAGATGATTTCCTTGGCCAAACTATCATTGAAGT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTGGAAAAGGTTCTCATaGAGACATGTATATTGTACA +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSWKRFS*RHVYCT
Trigger: TGTACAATATACATGTCTCCATGAGAACCTTTTCCA...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCAGGACACATGTACTTaGATGACAAACATGCAAAGT +
Preference number: 4 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNQDTCT*MTNMQS
Trigger: ACTTTGCATGTTTGTCATCCAAGTACATGTGTCCTG...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTACAGGACACATGTACTTaGATGACAAACATGCAAAGT +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLQDTCT*MTNMQS
Trigger: ACTTTGCATGTTTGTCATCCAAGTACATGTGTCCTG...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTAATTTTTGAGGATATCTaGAAAGTGCAGGTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLIFEDI*KVQVLH
Trigger: GTGAAGCACCTGCACTTTCCAGATATCCTCAAAAAT...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTCTTCCATGGAGCATCTaGACAAATCTCCAACTGTGT +
Preference number: 4 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSLPWSI*TNLQLC
Trigger: ACACAGTTGGAGATTTGTCCAGATGCTCCATGGAAG...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCGAAGACTATCATGTATaGGTTCAGATAACTCTGATT +
Preference number: 4 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSEDYHV*VQITLI
Trigger: AATCAGAGTTATCTGAACCCATACATGATAGTCTTC...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCATGGGTTTTCTCTATATaGAGCTTGTCTACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPWVFSI*SLSTRE
Trigger: CTCCCTTGTAGACAAGCTCCATATAGAGAAAACCCA...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATTACAGGTGGATCTTTTaGGGCATGATGTATACTAGA +
Preference number: 4 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNYRWIF*GMMYTR
Trigger: TCTAGTATACATCATGCCCCAAAAGATCCACCTGTA...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAGTCCTTATCTGGTGTaGTTCTGTCATTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSSPYLV*FCHLFS
Trigger: AGAAAACAAATGACAGAACCACACCAGATAAGGACT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATTTCTCTGGAACTGAATaGACTAGTTTTTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYFSGTE*TSFSTE
Trigger: CTCTGTGGAAAAACTAGTTCATTCAGTTCCAGAGAA...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR TCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAGATAACTCTGATTGCTaGTCTGTTTTCTGTATGACC +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPDNSDC*SVFCMT
Trigger: GGTCATACAGAAAACAGATCAGCAATCAGAGTTATC...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATTTTACTGTTTTCATCTaGTGCACATGCGCAACTTTG +
Preference number: 4 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYFTVFI*CTCATL
Trigger: CAAAGTTGCGCATGTGCAGCAGATGAAAACAGTAAA...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCATTTACTGTTTTCATCTaGTGCACATGCGCAACTTTG +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPFTVFI*CTCATL
Trigger: CAAAGTTGCGCATGTGCAGCAGATGAAAACAGTAAA...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAATATGGTTTGGTGTTaGCCTCTTAGTCAAAGATTT +
Preference number: 4 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSNMVWC*PLSQRF
Trigger: AAATCTTTGACTAAGAGGCCAACACCAAACCATATT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATACTGTCAGTAAACTCTaGTTGCTGAACACTGTATAC +
Preference number: 4 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYTVSKL*LLNTVY
Trigger: GTATACAGTGTTCAGCAACCAGAGTTTACTGACAGT...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTAGATTCTTTGGAAAACTaGTCTTGCAGAAGTTCACAA +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLDSLEN*SCRSSQ
Trigger: TTGTGAACTTCTGCAAGACCAGTTTTCCAAAGAATC...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTAAAAATATATTCCTTCTaGATGGCAATTCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLKIYSF*MAILAG
Trigger: CCCAGCAAGAATTGCCATCCAGAAGGAATATATTTT...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTACATATAGATAAAGAATaGCTTCCTCTCTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLHIDKE*LPLWIF
Trigger: AAAGATCCAGAGAGGAAGCCATTCTTTATCTATATG...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR TCA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCATACTTGAGAAGACTCTaGAATTTTGTTAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPYLRRL*NFVSLA
Trigger: AGCAAGGCTAACAAAATTTCAGAGTCTTCTCAAGTA...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTAATGGCTTATCCCTTTaGTCAAAACTTGACTCAAAT +
Preference number: 4 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTNGLSL*SKLDSN
Trigger: ATTTGAGTCAAGTTTTGACCAAAGGGATAAGCCATT...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR GCA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTATACTCATTATCATCTaGCAAGGCATTGATTTGCTC +
Preference number: 4 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSILIII*QGIDLL
Trigger: GAGCAAATCAATGCCTTGGCAGATGATAATGAGTAT...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTTGTTTTTGTTGGCCGTaGTTCTCATCAGTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSCFCWP*FSSVFE
Trigger: TTCAAAAACTGATGAGAACCACGGCCAACAAAAACA...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATGTATTATTCTTATGGTaGGAACTGTCACTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYVLFLW*ELSLFK
Trigger: CTTGAAAAGTGACAGTTCCCACCATAAGAATAATAC...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CCA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTCAAAATTCCAGATGCTaGTTTCTCACTTGTTACTGT +
Preference number: 4 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSQNSRC*FLTCYC
Trigger: ACAGTAACAAGTGAGAAACCAGCATCTGGAATTTTG...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 90 bp CCATCCAGGAAGTCCATGAGAGGTCGCAGCACACTATCTGCATCCTaGGCCACCGAGGCCCTGGCGTTAGGGGATGCATTCCCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: PSRKSMRGRSTLSAS*ATEALALGDAFPVP
Trigger: GGGCACAGGGAATGCATCCCCTAACGCCAGGGCCTCGGTGGCTCAGGATGCAGATAGTGTGCTGCGACCTCTCATGGACTTCCTGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000145899.2
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS GCA 90 bp CACACTATCTGCATCCTGAGCCACCGAGGCCCTGGCGTTAGGGGATaGATTCCCTGTGCCCCGAACTTGGCCCAGGATGTCAGCCATTTG +
Preference number: 5 (lower is better)
Translates to: HTICILSHRGPGVRG*IPCAPNLAQDVSHL
Trigger: CAAATGGCTGACATCCTGGGCCAAGTTCGGGGCACAGGGAATGCATCCCCTAACGCCAGGGCCTCGGTGGCTCAGGATGCAGATAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000145899.2
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS GCA 90 bp GAGGTTGCCATCCAGGAAGTCCATGAGAGGTCGCAGCACACTATCTaGATCCTGAGCCACCGAGGCCCTGGCGTTAGGGGATGCATTCCC +
Preference number: 5 (lower is better)
Translates to: EVAIQEVHERSQHTI*ILSHRGPGVRGCIP
Trigger: GGGAATGCATCCCCTAACGCCAGGGCCTCGGTGGCTCAGGATGCAGATAGTGTGCTGCGACCTCTCATGGACTTCCTGGATGGCAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000145899.2
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CCA 90 bp TGGAGTCGGACCTTGGTAACCGCTCGGAACCAGTGTGCTCTGGCCTaGGTAAATGGCGATGATGCGGTCTCCTCAGGAAGACTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: WSRTLVTARNQCALA*VNGDDAVSSGRLSW
Trigger: CCAGGAGAGTCTTCCTGAGGAGACCGCATCATCGCCATTTACCCAGGCCAGAGCACACTGGTTCCGAGCGGTTACCAAGGTCCGACTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000168032.2
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCTGGGTACTCAGGCACTaGCCCCTGGAGGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCWVLRH*PLEGRQ
Trigger: CTGCCTGCCCTCCAGGGGCAAGTGCCTGAGTACCCA...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS CCA 90 bp ACCGAGGCCCTGGCGTTAGGGGATGCATTCCCTGTGCCCCGAACTTaGCCCAGGATGTCAGCCATTTGTCGAACACATTCATCAATCCGC +
Preference number: 5 (lower is better)
Translates to: TEALALGDAFPVPRT*PRMSAICRTHSSIR
Trigger: GCGGATTGATGAATGTGTTCGACAAATGGCTGACATCCTGGGCCAAGTTCGGGGCACAGGGAATGCATCCCCTAACGCCAGGGCCTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000145899.2
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CCA 90 bp CTCGGGCTACCTCGTCATTGCTCCTCTGAGACAGAATCCGGAGAATaGTCATGCCTGTCTCATCCATATGGATCTTCCGGCCCAGTGGGC +
Preference number: 5 (lower is better)
Translates to: LGLPRHCSSETESGE*SCLSHPYGSSGPVG
Trigger: GCCCACTGGGCCGGAAGATCCATATGGATGAGACAGGCATGACCATTCTCCGGATTCTGTCTCAGAGGAGCAATGACGAGGTAGCCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCGCTGCAGCGCATGCCTaGCCGGGCAAGGCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSAAAHA*PGKAPE
Trigger: CTCTGGGGCCTTGCCCGGCAAGGCATGCGCTGCAGC...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCACCCTGTGCCCCGAACTaGGCCCAGGATGTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: GIIVQAPPLCLANPWGTAPCAPN*AQDVSH
Trigger: ATGGCTGACATCCTGGGCCAAGTTCGGGGCACAGGG...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS GCA 90 bp CTACCTCGTCATTGCTCCTCTGAGACAGAATCCGGAGAATGGTCATaGCTGTCTCATCCATATGGATCTTCCGGCCCAGTGGGCACCAGC +
Preference number: 5 (lower is better)
Translates to: LPRHCSSETESGEWS*LSHPYGSSGPVGTS
Trigger: GCTGGTGCCCACTGGGCCGGAAGATCCATATGGATGAGACAGGCATGACCATTCTCCGGATTCTGTCTCAGAGGAGCAATGACGAGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGTGGGTACTCAGGCACTaGCCCCTGGAGGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQWVLRH*PLEGRQ
Trigger: CTGCCTGCCCTCCAGGGGCAAGTGCCTGAGTACCCA...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CCA 90 bp GTCATTGCAAGAGTCATGGGAACTGCCTTGAAGAAAGAGCTGCTGTaGCAGCCGCACAGGAACAGGGAACTGGTGTACAGAAGCGTTGGG +
Preference number: 5 (lower is better)
Translates to: VIARVMGTALKKELL*QPHRNRELVYRSVG
Trigger: CCCAACGCTTCTGTACACCAGTTCCCTGTTCCTGTGCGGCTGCCACAGCAGCTCTTTCTTCAAGGCAGTTCCCATGACTCTTGCAATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
CDS CCA 90 bp CCACTTCACCAGACTTTGAAAGCTCCTGAGCACAGTCACTTGGCTTaGCCACCAACTGTTCTGTGGTCCCAGAGGGCAGCGTACAGATGT +
Preference number: 5 (lower is better)
Translates to: PLHQTLKAPEHSHLA*PPTVLWSQRAAYRC
Trigger: ACATCTGTACGCTGCCCTCTGGGACCACAGAACAGTTGGTGGCCAAGCCAAGTGACTGTGCTCAGGAGCTTTCAAAGTCTGGTGAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTGCTGCAGCGCATGCCTaGCCGGGCAAGGCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTAAAHA*PGKAPE
Trigger: CTCTGGGGCCTTGCCCGGCAAGGCATGCGCTGCAGC...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCCCTGTGCCCCGAACTaGGCCCAGGATGTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQPCAPN*AQDVSH
Trigger: ATGGCTGACATCCTGGGCCAAGTTCGGGGCACAGGG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCAGCTGGCTCAGCTCCTaGGCAGCAGTTAAGATCAGC +
Preference number: 5 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCSWLSS*AAVKIS
Trigger: GCTGATCTTAACTGCTGCCAAGGAGCTGAGCCAGCT...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGGCAGATCCAGACAGGTaGCTGTCTTCACCCCAGTGT +
Preference number: 5 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWADPDR*LSSPQC
Trigger: ACACTGGGGTGAAGACAGCAACCTGTCTGGATCTGC...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 90 bp TCTCTGACTGGGAACCACTCTCGTTGCTTTCCAGGTCCTCAGGACTaGTGGACCCATTGTTCTCCAGCTTCTGAAATACCCCCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: SLTGNHSRCFPGPQD*WTHCSPASEIPPAE
Trigger: CTCTGCAGGGGGTATTTCAGAAGCTGGAGAACAATGGGTCCATCAGTCCTGAGGACCTGGAAAGCAACGAGAGTGGTTCCCAGTCAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 90 bp ATGCCTACTCCACCAGAAACCACACTGAGCAAGCTCTCACTTCCCTaGCTTGCTGGACTCTCCACTGAACAATCGTGGGCACCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: MPTPPETTLSKLSLP*LAGLSTEQSWAPPE
Trigger: TTCAGGAGGTGCCCACGATTGTTCAGTGGAGAGTCCAGCAAGTCAGGGAAGTGAGAGCTTGCTCAGTGTGGTTTCTGGTGGAGTAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCACACTTCTCATGGCACTaGACTCCACACTCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GIIVQAPPLCLANPWGTAHFSWH*TPHSLQ
Trigger: CTGCAGCGAGTGTGGAGTCAAGTGCCATGAGAAGTG...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGACCCTGTGCCCCGAACTaGGCCCAGGATGTCAGCCAT +
Preference number: 5 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGPCAPN*AQDVSH
Trigger: ATGGCTGACATCCTGGGCCAAGTTCGGGGCACAGGG...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCAAGCTGGCTCAGCTCCTaGGCAGCAGTTAAGATCAGC +
Preference number: 5 (lower is better)
Translates to: GIIVQAPPLCLANPWGTASWLSS*AAVKIS
Trigger: GCTGATCTTAACTGCTGCCAAGGAGCTGAGCCAGCT...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCATGTGGTCCTTGAGTTaGGAAAGCTGGCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVMWSLS*ESWLSS
Trigger: GGAGCTGAGCCAGCTTTCCAAACTCAAGGACCACAT...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GACCTGCTGAAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCGAGCGCACAAATGTCTaGATGAGAGTGTCTGTAGTC +
Preference number: 5 (lower is better)
Translates to: DLLKGFVSDLPASPQVPSERTNV*MRVSVV
Trigger: GACTACAGACACTCTCATCAAGACATTTGTGCGCTC...GGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTTCAGCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS TCA 90 bp AACTACTGGCCTCCTACAAGGCTGGGCAGTTACTGGAGCAATAGCTaGGAGGCTTTGCTTCTCCTCAGAAGACTGCTGCTTCTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: NYWPPTRLGSYWSNS*EALLLLRRLLLLLQ
Trigger: TTGGAGGAGAAGCAGCAGTCTTCTGAGGAGAAGCAAAGCCTCTCAGCTATTGCTCCAGTAACTGCCCAGCCTTGTAGGAGGCCAGTAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 90 bp ACTGCATACAGTCTCTGCCCTGACCTTATCTGGGGAGAGGCTGGATaGAGGTCCCAACGTCAGCATGATTTCCTCCTCAGACTCTCTCAA +
Preference number: 5 (lower is better)
Translates to: TAYSLCPDLIWGEAG*RSQRQHDFLLRLSQ
Trigger: TTGAGAGAGTCTGAGGAGGAAATCATGCTGACGTTGGGACCTTCATCCAGCCTCTCCCCAGATAAGGTCAGGGCAGAGACTGTATGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 90 bp CTTTCCAGGTCCTCAGGACTGATGGACCCATTGTTCTCCAGCTTCTaGAATACCCCCTGCAGAGCCAAACGAAAGTGCTGGATTGCTCGA +
Preference number: 5 (lower is better)
Translates to: LSRSSGLMDPLFSSF*NTPCRAKRKCWIAR
Trigger: TCGAGCAATCCAGCACTTTCGTTTGGCTCTGCAGGGGGTATTTCAGAAGCTGGAGAACAATGGGTCCATCAGTCCTGAGGACCTGGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACAGTTGGAGTCGGACCTaGGTAACCGCTCGGAACCAG +
Preference number: 5 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDSWSRT*VTARNQ
Trigger: CTGGTTCCGAGCGGTTACCAAGGTCCGACTCCAACT...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATACACTTCTCATGGCACTaGACTCCACACTCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTIHFSWH*TPHSLQ
Trigger: CTGCAGCGAGTGTGGAGTCAAGTGCCATGAGAAGTG...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGCTCAGTTGCTGCATGTaGTTCATCAGGATACAGGGC +
Preference number: 5 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWLSCCM*FIRIQG
Trigger: GCCCTGTATCCTGATGAACAACATGCAGCAACTGAG...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGTCGGAGTCCAGCTCTTaGCCTCCCATGGCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQSESSS*PPMASN
Trigger: GTTTGAGGCCATGGGAGGCAAAGAGCTGGACTCCGA...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGGAACAGCCCTTCTGCTaGAGATCTGGCCCTTGGGAG +
Preference number: 5 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLEQPFC*RSGPWE
Trigger: CTCCCAAGGGCCAGATCTCAAGCAGAAGGGCTGTTC...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCAAAACCGGAGATGACTTaGCAGGCATCTGCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: GIIVQAPPLCLANPWGTAKPEMT*QASALG
Trigger: ACCCAGAGCAGATGCCTGCAAAGTCATCTCCGGTTT...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 90 bp GAAAATTCCAGCTGCCTTTCCACTTCACCAGACTTTGAAAGCTCCTaGGCACAGTCACTTGGCTTGGCCACCAACTGTTCTGTGGTCCCA +
Preference number: 5 (lower is better)
Translates to: ENSSCLSTSPDFESS*AQSLGLATNCSVVP
Trigger: TGGGACCACAGAACAGTTGGTGGCCAAGCCAAGTGACTGTGCTCAGGAGCTTTCAAAGTCTGGTGAAGTGGAAAGGCAGCTGGAATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 90 bp CTCCTACAAGGCTGGGCAGTTACTGGAGCAATAGCTGAGAGGCTTTaGTTCTCCTCAGAAGACTGCTGCTTCTCCTCCAAAAAGGACAAG +
Preference number: 5 (lower is better)
Translates to: LLQGWAVTGAIAERL*FSSEDCCFSSKKDK
Trigger: CTTGTCCTTTTTGGAGGAGAAGCAGCAGTCTTCTGAGGAGAAGCAAAGCCTCTCAGCTATTGCTCCAGTAACTGCCCAGCCTTGTAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 90 bp GCCTTTTCCCCACTGCACACTTTGCCCAGGGAGCTGCTACCTACGTaGAAGCCTTCTATTTCACTCAGTACTGAATCTACACAGCTAGAC +
Preference number: 5 (lower is better)
Translates to: AFSPLHTLPRELLPT*KPSISLSTESTQLD
Trigger: GTCTAGCTGTGTAGATTCAGTACTGAGTGAAATAGAAGGCTTGCACGTAGGTAGCAGCTCCCTGGGCAAAGTGTGCAGTGGGGAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 90 bp GGAGTTCCTGAGCCTTTTCCCCACTGCACACTTTGCCCAGGGAGCTaGTACCTACGTGCAAGCCTTCTATTTCACTCAGTACTGAATCTA +
Preference number: 5 (lower is better)
Translates to: GVPEPFPHCTLCPGS*YLRASLLFHSVLNL
Trigger: TAGATTCAGTACTGAGTGAAATAGAAGGCTTGCACGTAGGTAGCAGCTCCCTGGGCAAAGTGTGCAGTGGGGAAAAGGCTCAGGAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 90 bp CATCGTGCTGTCAGGACTCAGAGTCGCAAACCTTCTAGACTTGTCTaGCAAAAGGTCCTCCAGCTGCTTTGGGCTCAGAATATCAAGTCC +
Preference number: 5 (lower is better)
Translates to: HRAVRTQSRKPSRLV*QKVLQLLWAQNIKS
Trigger: GGACTTGATATTCTGAGCCCAAAGCAGCTGGAGGACCTTTTGGCAGACAAGTCTAGAAGGTTTGCGACTCTGAGTCCTGACAGCACGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCACATCCGACTGACGGATaGTCTTCAGTGCAATCCACA +
Preference number: 5 (lower is better)
Translates to: GIIVQAPPLCLANPWGTAHPTDG*SSVQST
Trigger: TGTGGATTGCACTGAAGACAATCCGTCAGTCGGATG...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAGACCAGACCTCAAAGTaGTGGGGCGTGGTACACGAG +
Preference number: 5 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGDQTSK*WGVVHE
Trigger: CTCGTGTACCACGCCCCACAACTTTGAGGTCTGGTC...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTATCGGAGTCCAGCTCTTaGCCTCCCATGGCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLSESSS*PPMASN
Trigger: GTTTGAGGCCATGGGAGGCAAAGAGCTGGACTCCGA...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGGCAAACAGCGTGAGGTaGCCATCCAGGAAGTCCATG +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQANSVR*PSRKSM
Trigger: CATGGACTTCCTGGATGGCAACCTCACGCTGTTTGC...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGAGCTGGCTCAGCTCCTaGGCAGCAGTTAAGATCAGC +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQSWLSS*AAVKIS
Trigger: GCTGATCTTAACTGCTGCCAAGGAGCTGAGCCAGCT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTACTTGAGATCTGGCCCTaGGGAGAGCTGCAGAGGCTT +
Preference number: 5 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLLEIWP*GELQRL
Trigger: AAGCCTCTGCAGCTCTCCCAAGGGCCAGATCTCAAG...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 90 bp CTTTGCATCAACCACAGTTATGCTACAGGCACTGAGAGCAGACTCTaGATTGAGTCCTGCACAGGCAGCTTCTCCAGGCAAGCTTTTTGG +
Preference number: 5 (lower is better)
Translates to: LCINHSYATGTESRL*IESCTGSFSRQAFW
Trigger: CCAAAAAGCTTGCCTGGAGAAGCTGCCTGTGCAGGACTCAATTCAGAGTCTGCTCTCAGTGCCTGTAGCATAACTGTGGTTGATGCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 90 bp CAGGGAGCTGCTACCTACGTGCAAGCCTTCTATTTCACTCAGTACTaGATCTACACAGCTAGACACTTCATCCACAGAGCCCTGGACTTG +
Preference number: 5 (lower is better)
Translates to: QGAATYVQAFYFTQY*IYTARHFIHRALDL
Trigger: CAAGTCCAGGGCTCTGTGGATGAAGTGTCTAGCTGTGTAGATTCAGTACTGAGTGAAATAGAAGGCTTGCACGTAGGTAGCAGCTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 90 bp TTGGAGGTGCCATCCAGGACACTCTGCTTTACTGTTTTCATCTGCTaGACATGCGCAACTTTGCTCACTGTGAACACATCCCGGATAACC +
Preference number: 5 (lower is better)
Translates to: LEVPSRTLCFTVFIC*TCATLLTVNTSRIT
Trigger: GGTTATCCGGGATGTGTTCACAGTGAGCAAAGTTGCGCATGTGCAGCAGATGAAAACAGTAAAGCAGAGTGTCCTGGATGGCACCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS GCA 90 bp CACTTGGAGGTGCCATCCAGGACACTCTGCTTTACTGTTTTCATCTaGTGCACATGCGCAACTTTGCTCACTGTGAACACATCCCGGATA +
Preference number: 5 (lower is better)
Translates to: HLEVPSRTLCFTVFI*CTCATLLTVNTSRI
Trigger: TATCCGGGATGTGTTCACAGTGAGCAAAGTTGCGCATGTGCAGCAGATGAAAACAGTAAAGCAGAGTGTCCTGGATGGCACCTCCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS GCA 90 bp ATCTTTCTACATGGAGTTCCTGAGCCTTTTCCCCACTGCACACTTTaGCCAGGGAGCTGCTACCTACGTGCAAGCCTTCTATTTCACTCA +
Preference number: 5 (lower is better)
Translates to: IFLHGVPEPFPHCTL*PGSCYLRASLLFHS
Trigger: TGAGTGAAATAGAAGGCTTGCACGTAGGTAGCAGCTCCCTGGGCAAAGTGTGCAGTGGGGAAAAGGCTCAGGAACTCCATGTAGAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 90 bp AGAGTCGCAAACCTTCTAGACTTGTCTGCCAAAAGGTCCTCCAGCTaGTTTGGGCTCAGAATATCAAGTCCAGCTTCACAGCCTAGCATC +
Preference number: 5 (lower is better)
Translates to: RVANLLDLSAKRSSS*FGLRISSPASQPSI
Trigger: GATGCTAGGCTGTGAAGCTGGACTTGATATTCTGAGCCCAAAGCAGCTGGAGGACCTTTTGGCAGACAAGTCTAGAAGGTTTGCGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CCA 90 bp TACCTACATCTCTGGCCAGGACCCCTAGGCAAAATGGGCCTGGCTTaGTTTCTCTCTGAAGGATCTGAACAGTTTGTTATACTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: YLHLWPGPLGKMGLA*FLSEGSEQFVILAG
Trigger: ACCTGCCAGTATAACAAACTGTTCAGATCCTTCAGAGAGAAACCAAGCCAGGCCCATTTTGCCTAGGGGTCCTGGCCAGAGATGTAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CCA 90 bp CCTCCTGAACTTACTGTCCAAAGAAGTCTATCACTGTTCTCTGACTaGGAACCACTCTCGTTGCTTTCCAGGTCCTCAGGACTGATGGAC +
Preference number: 5 (lower is better)
Translates to: PPELTVQRSLSLFSD*EPLSLLSRSSGLMD
Trigger: GTCCATCAGTCCTGAGGACCTGGAAAGCAACGAGAGTGGTTCCCAGTCAGAGAACAGTGATAGACTTCTTTGGACAGTAAGTTCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTAACACGGTGCCCACCATaGTGTCCCATATCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLTRCPP*CPISVP
Trigger: AGGGACTGATATGGGACACAATGGTGGGCACCGTGT...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATACATCCGACTGACGGATaGTCTTCAGTGCAATCCACA +
Preference number: 5 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTIHPTDG*SSVQST
Trigger: TGTGGATTGCACTGAAGACAATCCGTCAGTCGGATG...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAAGTTGGAGTCGGACCTaGGTAACCGCTCGGAACCAG +
Preference number: 5 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLSWSRT*VTARNQ
Trigger: CTGGTTCCGAGCGGTTACCAAGGTCCGACTCCAACT...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCCACTTCTCATGGCACTaGACTCCACACTCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSHFSWH*TPHSLQ
Trigger: CTGCAGCGAGTGTGGAGTCAAGTGCCATGAGAAGTG...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGATTTTGGCTGACCACTaGGAGGTGCCATCCAGGACA +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQILADH*EVPSRT
Trigger: TGTCCTGGATGGCACCTCCAAGTGGTCAGCCAAAAT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTGTCTTGGTGCGCTTCTaGGTTTTCCCAACTTGCACA +
Preference number: 5 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVVLVRF*VFPTCT
Trigger: TGTGCAAGTTGGGAAAACCAAGAAGCGCACCAAGAC...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCGTTCTCTTCTCCAGATaGTACCAGACATCCATCTCT +
Preference number: 5 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVVLFSR*YQTSIS
Trigger: AGAGATGGATGTCTGGTACAATCTGGAGAAGAGAAC...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGAGAAAGGAAGCCTCTTaGGGTTCCTTTGTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWRKEAS*GSFVRS
Trigger: ACTTCTGACAAAGGAACCCAAAGAGGCTTCCTTTCT...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GACCTGCTGAAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCGTTTTGTCAGATTCTTaGGAAAACTGGTCTTGCAGA +
Preference number: 5 (lower is better)
Translates to: DLLKGFVSDLPASPQVPSVLSDS*ENWSCR
Trigger: TCTGCAAGACCAGTTTTCCAAAGAATCTGACAAAAC...GGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTTCAGCAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCATTGAGACAGGTGGACTaGTTGATTGCTGTACCTGGT +
Preference number: 5 (lower is better)
Translates to: GIIVQAPPLCLANPWGTALRQVD*LIAVPG
Trigger: ACCAGGTACAGCAATCAACAAGTCCACCTGTCTCAA...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTCAAGGGAGTGGGAAGTaGTCCTCTGGCAGGGATCCA +
Preference number: 5 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSQGSGK*SSGRDP
Trigger: TGGATCCCTGCCAGAGGACAACTTCCCACTCCCTTG...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACGGTCCTCCAGCTGCTTaGGGCTCAGAATATCAAGTC +
Preference number: 5 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDGPPAA*GSEYQV
Trigger: GACTTGATATTCTGAGCCCAAAGCAGCTGGAGGACC...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 90 bp CCCGAGCCTCTGGGATCCAGACTCCTCCACTGCCCTGAATGTCTGTaGGGTAATGGAAAAGGTTCTCATGGAGACATGTATATTGTACAT +
Preference number: 5 (lower is better)
Translates to: PEPLGSRLLHCPECL*GNGKGSHGDMYIVH
Trigger: ATGTACAATATACATGTCTCCATGAGAACCTTTTCCATTACCTCACAGACATTCAGGGCAGTGGAGGAGTCTGGATCCCAGAGGCTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS TCA 90 bp AGTCTCTGCTGCCATGTTACCAGAGGAGCTAGAGGGGTTAAAGATTaGACTCAGTGTTTTCCCATGGTCAGGAGTGGATGGGAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: SLCCHVTRGARGVKD*TQCFPMVRSGWEVK
Trigger: CTTCACTTCCCATCCACTCCTGACCATGGGAAAACACTGAGTTCAATCTTTAACCCCTCTAGCTCCTCTGGTAACATGGCAGCAGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 90 bp GTTCTTCCTTGTGTTTCTCTGAAGGACGAGCAGATCCAGACAGGTTaGTGTCTTCACCCCAGTGTTCTTCAGGTGCTGAAAATTCCAGCT +
Preference number: 5 (lower is better)
Translates to: VLPCVSLKDEQIQTG*CLHPSVLQVLKIPA
Trigger: AGCTGGAATTTTCAGCACCTGAAGAACACTGGGGTGAAGACAGCAACCTGTCTGGATCTGCTCGTCCTTCAGAGAAACACAAGGAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 90 bp GGAGCTGTGCCTGTTCTGTATGCCTCTTGGATATACCTGTTGCACTaGATGCCATTAACACAGAGGTGCTTTGCTAGAAAGTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: GAVPVLYASWIYLLH*MPLTQRCFARKLST
Trigger: GGTGGACAACTTTCTAGCAAAGCACCTCTGTGTTAATGGCATGCAGTGCAACAGGTATATCCAAGAGGCATACAGAACAGGCACAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CCA 90 bp GGTCCTAGGACATGGTCCTTATGCAGCACCAGATCTGAAGGAGGGTaGATTGTAGCATCATCTCTCATCTCCTTGGATTCACCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: GPRTWSLCSTRSEGG*IVASSLISLDSPVF
Trigger: GAAAACAGGTGAATCCAAGGAGATGAGAGATGATGCTACAATCCACCCTCCTTCAGATCTGGTGCTGCATAAGGACCATGTCCTAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
CDS CCA 90 bp ACCCCTCAAGTGGATGGAGGAGAGAAAGTTCACCACAACAATCACTaGTTACCCAGGATGCTCCTGATGTTCCTTTTACTTCCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: TPQVDGGEKVHHNNH*LPRMLLMFLLLPPA
Trigger: TGCAGGAGGAAGTAAAAGGAACATCAGGAGCATCCTGGGTAACCAGTGATTGTTGTGGTGAACTTTCTCTCCTCCATCCACTTGAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp TGGAAGTGGGAAGTGGAATGGACAGTTGTCTACCAAGAAGAGCTGACATCCTTGCACGAACTGCTACAGTaGTGCTCTTCACGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: WKWEVEWTVVYQEELTSLHELLQ*CSSRSG
Trigger: TCCAGAACGTGAAGAGCACAACTGTAGCAGTTCGTG...CAAGGATGTCAGCTCTTCTTGGTAGACAACTGTCCATTCCACTTCCCACTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCAGCAGAGAGCTTCCTaGACTCACATTACAGGAGGA +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQQQRAS*THITGG
Trigger: TCCTCCTGTAATGTGAGTCAAGGAAGCTCTCTGCTG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTGACCAGACCTCAAAGTaGTGGGGCGTGGTACACGAG +
Preference number: 5 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTDQTSK*WGVVHE
Trigger: CTCGTGTACCACGCCCCACAACTTTGAGGTCTGGTC...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCAATTTTGGCTGACCACTaGGAGGTGCCATCCAGGACA +
Preference number: 5 (lower is better)
Translates to: LFMEKPLHEVASTAQLLAILADH*EVPSRT
Trigger: TGTCCTGGATGGCACCTCCAAGTGGTCAGCCAAAAT...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCTTTCCAAAAATGGTCTaGGTGCGCTTCTTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCFPKMV*VRFLVF
Trigger: GAAAACCAAGAAGCGCACCAAGACCATTTTTGGAAA...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCCTGAGACAGCTGACTaGTCTGTTCTCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQPETAD*SVLFSR
Trigger: TCTGGAGAAGAGAACAGACAAGTCAGCTGTCTCAGG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACCCTGAGACAGCTGACTaGTCTGTTCTCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDPETAD*SVLFSR
Trigger: TCTGGAGAAGAGAACAGACAAGTCAGCTGTCTCAGG...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACTCTATCCTCAGTGAGTaGTGTAGCTGGTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDSILSE*CSWSSS
Trigger: ACTGCTGGACCAGCTACACAACTCACTGAGGATAGA...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACCTCAGTTGCTGCATGTaGTTCATCAGGATACAGGGC +
Preference number: 5 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDLSCCM*FIRIQG
Trigger: GCCCTGTATCCTGATGAACAACATGCAGCAACTGAG...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTCAGTTGCTGCATGTaGTTCATCAGGATACAGGGC +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQLSCCM*FIRIQG
Trigger: GCCCTGTATCCTGATGAACAACATGCAGCAACTGAG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCAAACAGCGTGAGGTaGCCATCCAGGAAGTCCATG +
Preference number: 5 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLANSVR*PSRKSM
Trigger: CATGGACTTCCTGGATGGCAACCTCACGCTGTTTGC...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTGCAAACAGCGTGAGGTaGCCATCCAGGAAGTCCATG +
Preference number: 5 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSANSVR*PSRKSM
Trigger: CATGGACTTCCTGGATGGCAACCTCACGCTGTTTGC...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCCTCTTCTTATCACTTaGGTGTGGGCCAACCATGGT +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQPLLIT*VWANHG
Trigger: ACCATGGTTGGCCCACACCAAAGTGATAAGAAGAGG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCAAAGCTAGAAGCTACATaGTTTTCAACCTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GIIVQAPPLCLANPWGTAKLEAT*FSTWLL
Trigger: GAGGAGCCAGGTTGAAAACAATGTAGCTTCTAGCTT...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCCGAGAGGCATCCTTCTaGGTGCTTAAGCTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSREASF*VLKLAV
Trigger: CACAGCTAGCTTAAGCACCAAGAAGGATGCCTCTCG...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCAAGCTTTTTGGAAGAATaGATCCTACAGGGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: GIIVQAPPLCLANPWGTASFLEE*ILQGLW
Trigger: CCAGAGACCCTGTAGGATCAATTCTTCCAAAAAGCT...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCCGTGGACTTGCTCTaGACACTGCATACAGTCTCT +
Preference number: 5 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLPVDLL*TLHTVS
Trigger: AGAGACTGTATGCAGTGTCAAGAGCAAGTCCACGGG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTGGAGGCCAGAGAAGGTaGGTTATTGGCTTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSGGQRR*VIGLLL
Trigger: GAGCAGCAAGCCAATAACCAACCTTCTCTGGCCTCC...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGGCAAACCTTCTAGACTaGTCTGCCAAAAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQANLLD*SAKRSS
Trigger: GGAGGACCTTTTGGCAGACAAGTCTAGAAGGTTTGC...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 90 bp AGCAAGACTACTACTCTGGTTGTCCAGGAGATCCTCACTTTGATTTaGCTCAGAACCACACCCTTCGGTGCTTTCCCTTCTCGATACCTT +
Preference number: 5 (lower is better)
Translates to: SKTTTLVVQEILTLI*LRTTPFGAFPSRYL
Trigger: AAGGTATCGAGAAGGGAAAGCACCGAAGGGTGTGGTTCTGAGTCAAATCAAAGTGAGGATCTCCTGGACAACCAGAGTAGTAGTCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 90 bp GAAATACTAGTTTCTACAGAAGTAGTTACAAGCCCAAAGTACTCCTaGTTTGTGCTGGCCGTCAGAAGCTCTGGCTCTGGCTCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: EILVSTEVVTSPKYS*FVLAVRSSGSGSGS
Trigger: AGAGCCAGAGCCAGAGCCAGAGCTTCTGACGGCCAGCACAAATCAGGAGTACTTTGGGCTTGTAACTACTTCTGTAGAAACTAGTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 90 bp CATTCAGGTCAATATGAACCATGTTACTCAAAGTCTCAGGCCCTATaGTCACTTCCTCCATCGTGCTGTCAGGACTCAGAGTCGCAAACC +
Preference number: 5 (lower is better)
Translates to: HSGQYEPCYSKSQAL*SLPPSCCQDSESQT
Trigger: GGTTTGCGACTCTGAGTCCTGACAGCACGATGGAGGAAGTGATCATAGGGCCTGAGACTTTGAGTAACATGGTTCATATTGACCTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 90 bp AGAAGAATGTGCTCTGCTTCCAGTGAGGCCTCTGTGTCTGTGCCCTaGAAAAGCCCCATGTCTCCTTCATCACTCAAAGATAATATTCCT +
Preference number: 5 (lower is better)
Translates to: RRMCSASSEASVSVP*KSPMSPSSLKDNIP
Trigger: AGGAATATTATCTTTGAGTGATGAAGGAGACATGGGGCTTTTGCAGGGCACAGACACAGAGGCCTCACTGGAAGCAGAGCACATTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 90 bp TTGGAAGAAGAATGTGCTCTGCTTCCAGTGAGGCCTCTGTGTCTGTaGCCTGCAAAAGCCCCATGTCTCCTTCATCACTCAAAGATAATA +
Preference number: 5 (lower is better)
Translates to: LEEECALLPVRPLCL*PAKAPCLLHHSKII
Trigger: TATTATCTTTGAGTGATGAAGGAGACATGGGGCTTTTGCAGGGCACAGACACAGAGGCCTCACTGGAAGCAGAGCACATTCTTCTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 90 bp ACTTTTAGACTTGGTTGTGAACTTCCTCTTCTTATCACTTTGGTGTaGGCCAACCATGGTCACTTCCACAAAAGGCCGGAACATACCCGC +
Preference number: 5 (lower is better)
Translates to: TFRLGCELPLLITLV*ANHGHFHKRPEHTR
Trigger: GCGGGTATGTTCCGGCCTTTTGTGGAAGTGACCATGGTTGGCCCACACCAAAGTGATAAGAAGAGGAAGTTCACAACCAAGTCTAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGCCTCTGGCTTTCTTCTaGACTAGAATACTCATTATC +
Preference number: 5 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWPLAFF*TRILII
Trigger: GATAATGAGTATTCTAGTCAAGAAGAAAGCCAGAGG...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGACAGCAGAGAGCTTCCTaGACTCACATTACAGGAGGA +
Preference number: 5 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGQQRAS*THITGG
Trigger: TCCTCCTGTAATGTGAGTCAAGGAAGCTCTCTGCTG...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCCCGACCATCATCATCTaGCTCATGATACTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSPTIII*LMILVQ
Trigger: CTGGACCAGTATCATGAGCAAGATGATGATGGTCGG...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATGACCAGACCTCAAAGTaGTGGGGCGTGGTACACGAG +
Preference number: 5 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYDQTSK*WGVVHE
Trigger: CTCGTGTACCACGCCCCACAACTTTGAGGTCTGGTC...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAATTTTGGCTGACCACTaGGAGGTGCCATCCAGGACA +
Preference number: 5 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLILADH*EVPSRT
Trigger: TGTCCTGGATGGCACCTCCAAGTGGTCAGCCAAAAT...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCGTCTTGGTGCGCTTCTaGGTTTTCCCAACTTGCACA +
Preference number: 5 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSVLVRF*VFPTCT
Trigger: TGTGCAAGTTGGGAAAACCAAGAAGCGCACCAAGAC...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTATCTATCCTCAGTGAGTaGTGTAGCTGGTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLSILSE*CSWSSS
Trigger: ACTGCTGGACCAGCTACACAACTCACTGAGGATAGA...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGATCTATCCTCAGTGAGTaGTGTAGCTGGTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGSILSE*CSWSSS
Trigger: ACTGCTGGACCAGCTACACAACTCACTGAGGATAGA...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCATCGCGCACATATTCATaGTGGAGCCACTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: LFMEKPLHEVASTAQLLASRTYS*WSHFTL
Trigger: CAAGGTGAAGTGGCTCCACAATGAATATGTGCGCGA...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCATCGGAGTCCAGCTCTTaGCCTCCCATGGCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPSESSS*PPMASN
Trigger: GTTTGAGGCCATGGGAGGCAAAGAGCTGGACTCCGA...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTATGTGGTCCTTGAGTTaGGAAAGCTGGCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSMWSLS*ESWLSS
Trigger: GGAGCTGAGCCAGCTTTCCAAACTCAAGGACCACAT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTACGTACCATGTGGTCCTaGAGTTTGGAAAGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLRTMWS*SLESWL
Trigger: GAGCCAGCTTTCCAAACTCAAGGACCACATGGTACG...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCGCATGGAAGTATTGCTaGATGGTGTCCAAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLAWKYC*MVSKAK
Trigger: CTTGGCCTTGGACACCATCAAGCAATACTTCCATGC...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCGCATGGAAGTATTGCTaGATGGTGTCCAAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSAWKYC*MVSKAK
Trigger: CTTGGCCTTGGACACCATCAAGCAATACTTCCATGC...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGCCTCTTCTTATCACTTaGGTGTGGGCCAACCATGGT +
Preference number: 5 (lower is better)
Translates to: SASAEGILFSFQALFSLKPLLIT*VWANHG
Trigger: ACCATGGTTGGCCCACACCAAAGTGATAAGAAGAGG...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCCCTCTTCTTATCACTTaGGTGTGGGCCAACCATGGT +
Preference number: 5 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSPLLIT*VWANHG
Trigger: ACCATGGTTGGCCCACACCAAAGTGATAAGAAGAGG...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCAGATCGAGACTCTGATTaGAGCTTCACGAACTCTCGG +
Preference number: 5 (lower is better)
Translates to: LFMEKPLHEVASTAQLLADRDSD*SFTNSR
Trigger: CCGAGAGTTCGTGAAGCTCAAATCAGAGTCTCGATC...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGGAAATAATCCTAATTTaGTCATTCCTAGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWEIILI*SFLACQ
Trigger: CTGGCAGGCTAGGAATGACAAAATTAGGATTATTTC...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCCGCTCCACAGTATCTTaGGCACTTTGTTGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSRSTVS*ALCCGW
Trigger: CCAACCACAACAAAGTGCCAAAGATACTGTGGAGCG...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCATGCTGGTTTCTCACTaGTTACTGTACTTACTGATG +
Preference number: 5 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVMLVSH*LLYLLM
Trigger: CATCAGTAAGTACAGTAACAAGTGAGAAACCAGCAT...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGTCTCAAAACGAGGTCTaGTCTGCTCTGTTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: SASAEGILFSFQALFSLKSQNEV*SALFPG
Trigger: CCCAGGAAACAGAGCAGACAAGACCTCGTTTTGAGA...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGCCACTTCACCAGACTTaGAAAGCTCCTGAGCACAGT +
Preference number: 5 (lower is better)
Translates to: SASAEGILFSFQALFSLKPLHQT*KAPEHS
Trigger: ACTGTGCTCAGGAGCTTTCAAAGTCTGGTGAAGTGG...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTACTCAAAGCTACAAAGTaGGGGCAGGTCCCCATCTCT +
Preference number: 5 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLLKATK*GQVPIS
Trigger: AGAGATGGGGACCTGCCCCAACTTTGTAGCTTTGAG...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTGGGGTCCTCTTTGTaGATTCTGAGTCCTTATCTG +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQLGSSL*ILSPYL
Trigger: CAGATAAGGACTCAGAATCAACAAAGAGGACCCCAG...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTTCTCACTTCCCTGACTaGCTGGACTCTCCACTGAAC +
Preference number: 5 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSSHFPD*LDSPLN
Trigger: GTTCAGTGGAGAGTCCAGCAAGTCAGGGAAGTGAGA...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 90 bp TTCTTTAAGCACATCATCAGGGTCAGCTTTTTCATAGTGCTCTACTaGTGCATGGCTGCTTGGGTTCAATTCCGCCAGACTCCCACATTT +
Preference number: 5 (lower is better)
Translates to: FFKHIIRVSFFIVLY*CMAAWVQFRQTPTF
Trigger: AAATGTGGGAGTCTGGCGGAATTGAACCCAAGCAGCCATGCAGCAGTAGAGCACTATGAAAAAGCTGACCCTGATGATGTGCTTAAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 90 bp GCCTCTTGGATATACCTGTTGCACTGCATGCCATTAACACAGAGGTaGTTTGCTAGAAAGTTGTCCACCAGTTCCATAGTGTTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: ASWIYLLHCMPLTQR*FARKLSTSSIVFSP
Trigger: TGGGGAAAACACTATGGAACTGGTGGACAACTTTCTAGCAAAGCACCTCTGTGTTAATGGCATGCAGTGCAACAGGTATATCCAAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTACACGAACTGCTACAGTaGTGCTCTTCACGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLHELLQ*CSSRSG
Trigger: TCCAGAACGTGAAGAGCACAACTGTAGCAGTTCGTG...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCATTCAGTTCTTCATCCTaGAGAGAGGTACGTGTAGCC +
Preference number: 5 (lower is better)
Translates to: LFMEKPLHEVASTAQLLAFSSSS*REVRVA
Trigger: GGCTACACGTACCTCTCTCAAGGATGAAGAACTGAA...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAGGGCTCTGAAGTTCTaGCACCTTCATCCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGRALKF*HLHPEE
Trigger: TTCTTCAGGATGAAGGTGCAAGAACTTCAGAGCCCT...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTATGTGGTCCTTGAGTTaGGAAAGCTGGCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTMWSLS*ESWLSS
Trigger: GGAGCTGAGCCAGCTTTCCAAACTCAAGGACCACAT...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCGTACCATGTGGTCCTaGAGTTTGGAAAGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNRTMWS*SLESWL
Trigger: GAGCCAGCTTTCCAAACTCAAGGACCACATGGTACG...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCACCACAGACTACTTGTTGGTTGTTACTTTTAGACTaGGTTGTGAACTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LHEVASTAQLLAPQTTCWLLLLD*VVNFLF
Trigger: GAAGAGGAAGTTCACAACCAAGTCTAAAAGTAACAA...CCAACAAGTAGTCTGTGGTGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTGATCGAGACTCTGATTaGAGCTTCACGAACTCTCGG +
Preference number: 5 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSDRDSD*SFTNSR
Trigger: CCGAGAGTTCGTGAAGCTCAAATCAGAGTCTCGATC...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGATCGAGACTCTGATTaGAGCTTCACGAACTCTCGG +
Preference number: 5 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLDRDSD*SFTNSR
Trigger: CCGAGAGTTCGTGAAGCTCAAATCAGAGTCTCGATC...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGATGGATGAGTGCCATGTaGGTGACATACTTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGWMSAM*VTYFPA
Trigger: AGCAGGAAAGTATGTCACCAACATGGCACTCATCCA...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp ATTCCACTCTGTGTGTTCCTGCTCTGGCCAGTCGTCACTGTGGATCATGGAGTCACTGAAGCTCATCCATaGTGTCAACATATTTCTCTT +
Preference number: 5 (lower is better)
Translates to: IPLCVFLLWPVVTVDHGVTEAHP*CQHISL
Trigger: AAGAGAAATATGTTGACACAATGGATGAGCTTCAGT...GACTCCATGATCCACAGTGACGACTGGCCAGAGCAGGAACACACAGAGTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTAGCTTTAAGAGTTGTTaGGCTTACTTGAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVSFKSC*AYLKAS
Trigger: GCTGGCTTTCAAGTAAGCCAAACAACTCTTAAAGCT...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCAGACAGGTGGACTTGTaGATTGCTGTACCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSRQVDL*IAVPGD
Trigger: ATCACCAGGTACAGCAATCAACAAGTCCACCTGTCT...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTCTTTGGAACCACCTGTaGAGACAGGTGGACTTGTTG +
Preference number: 5 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSLWNHL*RQVDLL
Trigger: CAACAAGTCCACCTGTCTCAACAGGTGGTTCCAAAG...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTACGGCACCAGTTCCTTTaGAAGAGTCTCTGGGAGACT +
Preference number: 5 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLRHQFL*KSLWET
Trigger: AGTCTCCCAGAGACTCTTCAAAAGGAACTGGTGCCG...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCTGACTGTAGCTGTGTaGGAAGAAGAATGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLLTVAV*EEECAL
Trigger: CAGAGCACATTCTTCTTCCAACACAGCTACAGTCAG...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp AAAGGGTTTGTTTCTGACCTTCCAGCAAGCCCTCAGGTCCCCTCCATCCAATGCGAAGACTCTGAAATTTaGTTAGCCTTGCTGATGATA +
Preference number: 5 (lower is better)
Translates to: KGFVSDLPASPQVPSIQCEDSEI*LALLMI
Trigger: TATCATCAGCAAGGCTAACAAAATTTCAGAGTCTTC...GCATTGGATGGAGGGGACCTGAGGGCTTGCTGGAAGGTCAGAAACAAACCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGGCACAGTGTTCTTCCTaGTGTTTCTCTGAAGGACGA +
Preference number: 5 (lower is better)
Translates to: SASAEGILFSFQALFSLKAQCSS*CFSEGR
Trigger: TCGTCCTTCAGAGAAACACAAGGAAGAACACTGTGC...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGAGAGAAGGTTGGTTATaGGCTTGCTGCTCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQREGWL*ACCSKL
Trigger: TAGCTTTGAGCAGCAAGCCAATAACCAACCTTCTCT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTTGGTTCAAGTGCTGTaGCAGCTCAGCAATCTCAGA +
Preference number: 5 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSLVQVL*QLSNLR
Trigger: TCTGAGATTGCTGAGCTGCAACAGCACTTGAACCAA...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCCTACTGAAAGATGGCTaGCCGTCTGTACTAGCTCTT +
Preference number: 5 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSLLKDG*PSVLAL
Trigger: AAGAGCTAGTACAGACGGCAAGCCATCTTTCAGTAG...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 90 bp CTGTTGAGACAGGTGGACTTGTTGATTGCTGTACCTGGTGATCTCTaGCAGGTACCTCTTTTTCATTCAAACCATTACTCTGCATCTCCC +
Preference number: 5 (lower is better)
Translates to: LLRQVDLLIAVPGDL*QVPLFHSNHYSASP
Trigger: GGGAGATGCAGAGTAATGGTTTGAATGAAAAAGAGGTACCTGTCAGAGATCACCAGGTACAGCAATCAACAAGTCCACCTGTCTCAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 90 bp GAACCACCTGTTGAGACAGGTGGACTTGTTGATTGCTGTACCTGGTaGTCTCTGACAGGTACCTCTTTTTCATTCAAACCATTACTCTGC +
Preference number: 5 (lower is better)
Translates to: EPPVETGGLVDCCTW*SLTGTSFSFKPLLC
Trigger: GCAGAGTAATGGTTTGAATGAAAAAGAGGTACCTGTCAGAGATCACCAGGTACAGCAATCAACAAGTCCACCTGTCTCAACAGGTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 90 bp AAGATTGAACTCAGTGTTTTCCCATGGTCAGGAGTGGATGGGAAGTaGAGCTTTGGCCAACTAGCCATATTTGGGATCTCAAAACGAGGT +
Preference number: 5 (lower is better)
Translates to: KIELSVFPWSGVDGK*SFGQLAIFGISKRG
Trigger: ACCTCGTTTTGAGATCCCAAATATGGCTAGTTGGCCAAAGCTTCACTTCCCATCCACTCCTGACCATGGGAAAACACTGAGTTCAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 90 bp AAAATAGAGCTAGTGCTAGCAGACATCTCTTCTTGCTTTGCTGGCTaGGCACAGTGTTCTTCCTTGTGTTTCTCTGAAGGACGAGCAGAT +
Preference number: 5 (lower is better)
Translates to: KIELVLADISSCFAG*AQCSSLCFSEGRAD
Trigger: ATCTGCTCGTCCTTCAGAGAAACACAAGGAAGAACACTGTGCTCAGCCAGCAAAGCAAGAAGAGATGTCTGCTAGCACTAGCTCTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 90 bp CCCTGGACTTGGTTCAAGTGCTGTTGCAGCTCAGCAATCTCAGACTaGAGACGACTGATACCTTGCAGTTCTCTGATGATATATTCTACT +
Preference number: 5 (lower is better)
Translates to: PWTWFKCCCSSAISD*RRLIPCSSLMIYST
Trigger: AGTAGAATATATCATCAGAGAACTGCAAGGTATCAGTCGTCTTCAGTCTGAGATTGCTGAGCTGCAACAGCACTTGAACCAAGTCCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 90 bp GAGAGAAAGTTCACCACAACAATCACTGGTTACCCAGGATGCTCCTaGTGTTCCTTTTACTTCCTCCTGCAACTTAGACACATCACTCTG +
Preference number: 5 (lower is better)
Translates to: ERKFTTTITGYPGCS*CSFYFLLQLRHITL
Trigger: CAGAGTGATGTGTCTAAGTTGCAGGAGGAAGTAAAAGGAACATCAGGAGCATCCTGGGTAACCAGTGATTGTTGTGGTGAACTTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 90 bp ACTGGAGCAATAGCTGAGAGGCTTTGCTTCTCCTCAGAAGACTGCTaGTTCTCCTCCAAAAAGGACAAGTTAAACAAACTGAAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: TGAIAERLCFSSEDC*FSSKKDKLNKLKAE
Trigger: CTCTGCTTTCAGTTTGTTTAACTTGTCCTTTTTGGAGGAGAAGCAGCAGTCTTCTGAGGAGAAGCAAAGCCTCTCAGCTATTGCTCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 90 bp TCACTGGTTACCCAGGATGCTCCTGATGTTCCTTTTACTTCCTCCTaGAACTTAGACACATCACTCTGTTTTGCTAAGCCATCCTTTGGT +
Preference number: 5 (lower is better)
Translates to: SLVTQDAPDVPFTSS*NLDTSLCFAKPSFG
Trigger: ACCAAAGGATGGCTTAGCAAAACAGAGTGATGTGTCTAAGTTGCAGGAGGAAGTAAAAGGAACATCAGGAGCATCCTGGGTAACCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CCA 90 bp CCACCAAACACTGAAGCTCATCCATTGTGTCAACATATTTCTCTTTaGGTCCCTCAACAAAGGAAGGGGTCATATCTTCCATGGAGCATC +
Preference number: 5 (lower is better)
Translates to: PPNTEAHPLCQHISL*VPQQRKGSYLPWSI
Trigger: GATGCTCCATGGAAGATATGACCCCTTCCTTTGTTGAGGGACCCAAAGAGAAATATGTTGACACAATGGATGAGCTTCAGTGTTTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 90 bp TTGCAAAGGTACTGCCAGCTACACCACAACGCTCCACAGTATCTTTaGCACTTTGTTGTGGTTGGTCTTTTGATAGAGAAAGCTCTACAC +
Preference number: 5 (lower is better)
Translates to: LQRYCQLHHNAPQYL*HFVVVGLLIEKALH
Trigger: GTGTAGAGCTTTCTCTATCAAAAGACCAACCACAACAAAGTGCCAAAGATACTGTGGAGCGTTGTGGTGTAGCTGGCAGTACCTTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 90 bp ACTTTGGAGCCTAATACTGATCTGTCTTCTAATTTATCTGCATCTTaGTTCTGTAGAAGCCCTGTATGCCCTGGGTCTGGAGAAGCAGGT +
Preference number: 5 (lower is better)
Translates to: TLEPNTDLSSNLSAS*FCRSPVCPGSGEAG
Trigger: ACCTGCTTCTCCAGACCCAGGGCATACAGGGCTTCTACAGAACCAAGATGCAGATAAATTAGAAGACAGATCAGTATTAGGCTCCAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCGACCATCATCATCTaGCTCATGATACTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNPTIII*LMILVQ
Trigger: CTGGACCAGTATCATGAGCAAGATGATGATGGTCGG...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTTTCCAAGGCTTTCTCTaGTTCTCCCAAACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTFQGFL*FSQTSL
Trigger: CAGGCTGGTTTGGGAGAACAAGAGAAAGCCTTGGAA...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACTCATCTCTCATCTCCTaGGATTCACCTGTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDSSLIS*DSPVFS
Trigger: AGAGAAAACAGGTGAATCCAAGGAGATGAGAGATGA...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTATTCAGTTCTTCATCCTaGAGAGAGGTACGTGTAGCC +
Preference number: 5 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLFSSSS*REVRVA
Trigger: GGCTACACGTACCTCTCTCAAGGATGAAGAACTGAA...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTGTCTTGGTGCGCTTCTaGGTTTTCCCAACTTGCACA +
Preference number: 5 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTVLVRF*VFPTCT
Trigger: TGTGCAAGTTGGGAAAACCAAGAAGCGCACCAAGAC...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGTTTCCAAAAATGGTCTaGGTGCGCTTCTTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQFPKMV*VRFLVF
Trigger: GAAAACCAAGAAGCGCACCAAGACCATTTTTGGAAA...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCCCTGACTTTCCAAAAATGGTCTaGGTGCGCTTCTTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: QPFDYKDSKLATQLTLPDFPKMV*VRFLVF
Trigger: GAAAACCAAGAAGCGCACCAAGACCATTTTTGGAAA...GTCAGGGAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCGTTCTCTTCTCCAGATaGTACCAGACATCCATCTCT +
Preference number: 5 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLVLFSR*YQTSIS
Trigger: AGAGATGGATGTCTGGTACAATCTGGAGAAGAGAAC...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCTGAGACAGCTGACTaGTCTGTTCTCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNPETAD*SVLFSR
Trigger: TCTGGAGAAGAGAACAGACAAGTCAGCTGTCTCAGG...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAGGGCTCTGAAGTTCTaGCACCTTCATCCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSRALKF*HLHPEE
Trigger: TTCTTCAGGATGAAGGTGCAAGAACTTCAGAGCCCT...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTTCGCGCACATATTCATaGTGGAGCCACTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTSRTYS*WSHFTL
Trigger: CAAGGTGAAGTGGCTCCACAATGAATATGTGCGCGA...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCACGTACCATGTGGTCCTaGAGTTTGGAAAGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPRTMWS*SLESWL
Trigger: GAGCCAGCTTTCCAAACTCAAGGACCACATGGTACG...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCTTCCCTTTCTTGCATTaGGAGATCTGCAGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLFPFLH*EICSFP
Trigger: AGGGAAACTGCAGATCTCCAAATGCAAGAAAGGGAA...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTATCCATGTGGCAATTTaGTTGGACCTCTTTATCAGT +
Preference number: 5 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVIHVAI*LDLFIS
Trigger: ACTGATAAAGAGGTCCAACAAAATTGCCACATGGAT...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCCAAGGGAAATGCCACTaGTGTAAGATTCACACCTTC +
Preference number: 5 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSQGKCH*CKIHTF
Trigger: GAAGGTGTGAATCTTACACAAGTGGCATTTCCCTTG...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GGAATCATAGTCCAAGCTCCTCCTTTATGCTTGGCCAATCCGTGGGGAACAGCATCTAGAGAAGCAAACTaGCTTAAAATGACAGAAAGG +
Preference number: 5 (lower is better)
Translates to: GIIVQAPPLCLANPWGTASREAN*LKMTER
Trigger: CCTTTCTGTCATTTTAAGCAAGTTTGCTTCTCTAGA...TGCTGTTCCCCACGGATTGGCCAAGCATAAAGGAGGAGCTTGGACTATGATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GCCAGACAAACCAGTCCTGCTGCTCAAGTGACAGTGAATTCCACTCTGTGTGTTTCAATGGTGGTCTGTTaGGTCAGACTTCTAATTCTA +
Preference number: 5 (lower is better)
Translates to: ARQTSPAAQVTVNSTLCVSMVVC*VRLLIL
Trigger: TAGAATTAGAAGTCTGACCAAACAGACCACCATTGA...AACACACAGAGTGGAATTCACTGTCACTTGAGCAGCAGGACTGGTTTGTCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCCTGGTAGGGCTTTTGTaGGTTACTGTTTCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSLVGLL*VTVSLV
Trigger: TACCAAGGAAACAGTAACCAACAAAAGCCCTACCAG...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGACACATCACTCTGTTTaGCTAAGCCATCCTTTGGTA +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQTHHSV*LSHPLV
Trigger: TACCAAAGGATGGCTTAGCAAAACAGAGTGATGTGT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 90 bp AAGAAAGTAATGCTGGTCAGCAAATCCACTGTAGACTTTAAATCCTaGAGCCGCTCAGGGCTCCCAGCAGGAAAGTTATTCCTGTATGTA +
Preference number: 5 (lower is better)
Translates to: KKVMLVSKSTVDFKS*SRSGLPAGKLFLYV
Trigger: TACATACAGGAATAACTTTCCTGCTGGGAGCCCTGAGCGGCTTCAGGATTTAAAGTCTACAGTGGATTTGCTGACCAGCATTACTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS GCA 90 bp GTTACTGGAGCAATAGCTGAGAGGCTTTGCTTCTCCTCAGAAGACTaGTGCTTCTCCTCCAAAAAGGACAAGTTAAACAAACTGAAAGCA +
Preference number: 5 (lower is better)
Translates to: VTGAIAERLCFSSED*CFSSKKDKLNKLKA
Trigger: TGCTTTCAGTTTGTTTAACTTGTCCTTTTTGGAGGAGAAGCAGCAGTCTTCTGAGGAGAAGCAAAGCCTCTCAGCTATTGCTCCAGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 90 bp CAGCTTCTGAAATACCCCCTGCAGAGCCAAACGAAAGTGCTGGATTaGTCGACTCAGCTTAGTTGTGTGGAATTTAATTTCTACATCTTC +
Preference number: 5 (lower is better)
Translates to: QLLKYPLQSQTKVLD*STQLSCVEFNFYIF
Trigger: GAAGATGTAGAAATTAAATTCCACACAACTAAGCTGAGTCGAGCAATCCAGCACTTTCGTTTGGCTCTGCAGGGGGTATTTCAGAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CCA 90 bp CTTCTCCAGGCAAGCTTTTTGGAAGAATTGATCCTACAGGGTCTCTaGAAGAACCACTCTGAAAGCATGAAGTACTCACAGATGGTTCTT +
Preference number: 5 (lower is better)
Translates to: LLQASFLEELILQGL*KNHSESMKYSQMVL
Trigger: AAGAACCATCTGTGAGTACTTCATGCTTTCAGAGTGGTTCTTCCAGAGACCCTGTAGGATCAATTCTTCCAAAAAGCTTGCCTGGAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 90 bp CATCATGTTCAGGAAGTCCATATAGATAAAGAATGGCTTCCTCTCTaGATCTTTCTACATGGAGTTCCTGAGCCTTTTCCCCACTGCACA +
Preference number: 5 (lower is better)
Translates to: HHVQEVHIDKEWLPL*IFLHGVPEPFPHCT
Trigger: TGTGCAGTGGGGAAAAGGCTCAGGAACTCCATGTAGAAAGATCCAGAGAGGAAGCCATTCTTTATCTATATGGACTTCCTGAACATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATTTCCAAGGCTTTCTCTaGTTCTCCCAAACCAGCCTG +
Preference number: 5 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYFQGFL*FSQTSL
Trigger: CAGGCTGGTTTGGGAGAACAAGAGAAAGCCTTGGAA...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTTTCAGTTCTTCATCCTaGAGAGAGGTACGTGTAGCC +
Preference number: 5 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTFSSSS*REVRVA
Trigger: GGCTACACGTACCTCTCTCAAGGATGAAGAACTGAA...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTGTTCTCTTCTCCAGATaGTACCAGACATCCATCTCT +
Preference number: 5 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSVLFSR*YQTSIS
Trigger: AGAGATGGATGTCTGGTACAATCTGGAGAAGAGAAC...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTAATGGAGACATGTATATaGTACATGGTATGGGGCTAC +
Preference number: 5 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLMETCI*YMVWGY
Trigger: GTAGCCCCATACCATGTACAATATACATGTCTCCAT...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTACTTTCTTTACCAAAGTaGGAGGCTGCAAAACGATCA +
Preference number: 5 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLLSLPK*EAAKRS
Trigger: TGATCGTTTTGCAGCCTCCAACTTTGGTAAAGAAAG...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATTCGCGCACATATTCATaGTGGAGCCACTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYSRTYS*WSHFTL
Trigger: CAAGGTGAAGTGGCTCCACAATGAATATGTGCGCGA...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGAAGCTGGGAAGTTCTTaGATAAGATGTCTGCATACT +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQKLGSS*IRCLHT
Trigger: AGTATGCAGACATCTTATCAAAGAACTTCCCAGCTT...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTGAGCGCACAAATGTCTaGATGAGAGTGTCTGTAGTC +
Preference number: 5 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTERTNV*MRVSVV
Trigger: GACTACAGACACTCTCATCAAGACATTTGTGCGCTC...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp GCTTGGTTTGTTTCGTGTGTTGACTGGCGCATTGTGGACAATGTAGAGTCCTTAAGGTTTTCCTTCCAATaGACTCTCCATACCACCTTT +
Preference number: 5 (lower is better)
Translates to: AWFVSCVDWRIVDNVESLRFSFQ*TLHTTF
Trigger: AAAGGTGGTATGGAGAGTCAATTGGAAGGAAAACCT...TAAGGACTCTACATTGTCCACAATGCGCCAGTCAACACACGAAACAAACCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCATTCCTTGCCAAGAACTaGAAGACTATGGGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: LFMEKPLHEVASTAQLLAFLAKN*KTMGRN
Trigger: ATTTCTGCCCATAGTCTTCAAGTTCTTGGCAAGGAA...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAGTCAGTAAACTCTGGTaGCTGAACACTGTATACCAT +
Preference number: 5 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGVSKLW*LNTVYH
Trigger: ATGGTATACAGTGTTCAGCAACCAGAGTTTACTGAC...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGAAAATCAAAAGCAGTaGCTCCTTCTGCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLENQKQ*LLLLLL
Trigger: AAGGAGGAGCAGAAGGAGCAACTGCTTTTGATTTTC...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GGCCAAAGACTAGATGTTTTCTGCAAGGACGACAGCCGGAAGGTTGTGACCATAACTCACAGATGGTTCTaGCTTATTTGTTTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: GQRLDVFCKDDSRKVVTITHRWF*LICFWF
Trigger: AAACCAGAAACAAATAAGCAAGAACCATCTGTGAGT...TATGGTCACAACCTTCCGGCTGTCGTCCTTGCAGAAAACATCTAGTCTTTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCAAGGATCTGAACAGTTaGTTATACTGGCAGGTGAGA +
Preference number: 5 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSKDLNS*LYWQVR
Trigger: TCTCACCTGCCAGTATAACAAACTGTTCAGATCCTT...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTACAAGAGGATGGATTTTaGCAAGATGAGGTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLQEDGF*QDEVSV
Trigger: CACAGAGACCTCATCTTGCAAAAATCCATCCTCTTG...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp TCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCACATGCCTCATGTTCTaGTCTGCCCTGTTTGAAAAT +
Preference number: 5 (lower is better)
Translates to: SLDILTGRVSHLTTRTLSTCLMF*SALFEN
Trigger: ATTTTCAAACAGGGCAGACAAGAACATGAGGCATGT...GCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 90 bp TTAAGAACCTGGGCAGTACAGTTCTCTTCTTCATTCAGGTCAATATaGACCATGTTACTCAAAGTCTCAGGCCCTATGATCACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LRTWAVQFSSSFRSI*TMLLKVSGPMITSS
Trigger: GGAGGAAGTGATCATAGGGCCTGAGACTTTGAGTAACATGGTTCATATTGACCTGAATGAAGAAGAGAACTGTACTGCCCAGGTTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 90 bp AATAGGGCAGACCATAATCATAGCCTTCCAAGTCTGTGTTCCAGGTaGTGCTCTTCACAAATCCATTTTTGTAAGGGCACAAAATCGGAT +
Preference number: 5 (lower is better)
Translates to: NRADHNHSLPSLCSR*CSSQIHFCKGTKSD
Trigger: ATCCGATTTTGTGCCCTTACAAAAATGGATTTGTGAAGAGCAGCACCTGGAACACAGACTTGGAAGGCTATGATTATGGTCTGCCCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 90 bp GAAGGCTCATCGGCCACTTGTAAGGACGGCAAATCTTCCCTTTCTTaGATTTGGAGATCTGCAGTTTCCCTTTTACTTCTAATTAGATCA +
Preference number: 5 (lower is better)
Translates to: EGSSATCKDGKSSLS*IWRSAVSLLLLIRS
Trigger: TGATCTAATTAGAAGTAAAAGGGAAACTGCAGATCTCCAAATGCAAGAAAGGGAAGATTTGCCGTCCTTACAAGTGGCCGATGAGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 90 bp TCAGAAGTCACCCACGAGTCAGCAGGGACTTCATCTGTAGATAAATaGTTACGTCCATCCTCTAAAGATATCAACTTTGCTTCAACTGGA +
Preference number: 5 (lower is better)
Translates to: SEVTHESAGTSSVDK*LRPSSKDINFASTG
Trigger: TCCAGTTGAAGCAAAGTTGATATCTTTAGAGGATGGACGTAAGCATTTATCTACAGATGAAGTCCCTGCTGACTCGTGGGTGACTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 90 bp TTGTTACTTTTAGACTTGGTTGTGAACTTCCTCTTCTTATCACTTTaGTGTGGGCCAACCATGGTCACTTCCACAAAAGGCCGGAACATA +
Preference number: 5 (lower is better)
Translates to: LLLLDLVVNFLFLSL*CGPTMVTSTKGRNI
Trigger: TATGTTCCGGCCTTTTGTGGAAGTGACCATGGTTGGCCCACACCAAAGTGATAAGAAGAGGAAGTTCACAACCAAGTCTAAAAGTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCACTCTGCATAGAGTCATaGCAAGAGTCATGGGAACTG +
Preference number: 5 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPLCIES*QESWEL
Trigger: CAGTTCCCATGACTCTTGCAATGACTCTATGCAGAG...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTATCATCTCTCATCTCCTaGGATTCACCTGTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLSSLIS*DSPVFS
Trigger: AGAGAAAACAGGTGAATCCAAGGAGATGAGAGATGA...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAATGGAGACATGTATATaGTACATGGTATGGGGCTAC +
Preference number: 5 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLMETCI*YMVWGY
Trigger: GTAGCCCCATACCATGTACAATATACATGTCTCCAT...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTCTTTCTTTACCAAAGTaGGAGGCTGCAAAACGATCA +
Preference number: 5 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSLSLPK*EAAKRS
Trigger: TGATCGTTTTGCAGCCTCCAACTTTGGTAAAGAAAG...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp CTATTTATGGAAAAACCTCTCCATGAAGTAGCGTCCACAGCCCAGCTTCTAGCAAAGCTGGGAAGTTCTTaGATAAGATGTCTGCATACT +
Preference number: 5 (lower is better)
Translates to: LFMEKPLHEVASTAQLLAKLGSS*IRCLHT
Trigger: AGTATGCAGACATCTTATCAAAGAACTTCCCAGCTT...TGCTAGAAGCTGGGCTGTGGACGCTACTTCATGGAGAGGTTTTTCCATAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATGAGCGCACAAATGTCTaGATGAGAGTGTCTGTAGTC +
Preference number: 5 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYERTNV*MRVSVV
Trigger: GACTACAGACACTCTCATCAAGACATTTGTGCGCTC...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCAAACAGACTTCACAATaGAACTCTGAGTTTGTGGAG +
Preference number: 5 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLKQTSQ*NSEFVE
Trigger: CTCCACAAACTCAGAGTTCAATTGTGAAGTCTGTTT...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGTTTGGAAAACTGGTCTaGCAGAAGTTCACAATTCTT +
Preference number: 5 (lower is better)
Translates to: PNWESQPFDYKDSKLATQFGKLV*QKFTIL
Trigger: AAGAATTGTGAACTTCTGCAAGACCAGTTTTCCAAA...CTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp AGTGCCTCTGCAGAAGGTATCTTGTTCAGTTTCCAAGCCTTGTTCTCACTGAAGATACTAGAACTTTCTTaGAGACAAAGCACAGGTTCC +
Preference number: 5 (lower is better)
Translates to: SASAEGILFSFQALFSLKILELS*RQSTGS
Trigger: GGAACCTGTGCTTTGTCTCAAAGAAAGTTCTAGTAT...CTTCAGTGAGAACAAGGCTTGGAAACTGAACAAGATACCTTCTGCAGAGGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTTGCTTTGCTAGAAAGTaGTCCACCAGTTCCATAGTG +
Preference number: 5 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTCFARK*STSSIV
Trigger: CACTATGGAACTGGTGGACAACTTTCTAGCAAAGCA...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTTCTTGGATATACCTGTaGCACTGCATGCCATTAACA +
Preference number: 5 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSSWIYL*HCMPLT
Trigger: TGTTAATGGCATGCAGTGCAACAGGTATATCCAAGA...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTTCACAGCCTAGCATCTaGTCCTCTGTGTTTACCATA +
Preference number: 5 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTSQPSI*SSVFTI
Trigger: TATGGTAAACACAGAGGACAAGATGCTAGGCTGTGA...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CCA 90 bp TCATCGGCCACTTGTAAGGACGGCAAATCTTCCCTTTCTTGCATTTaGAGATCTGCAGTTTCCCTTTTACTTCTAATTAGATCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: SSATCKDGKSSLSCI*RSAVSLLLLIRSAR
Trigger: TCTTGCTGATCTAATTAGAAGTAAAAGGGAAACTGCAGATCTCCAAATGCAAGAAAGGGAAGATTTGCCGTCCTTACAAGTGGCCGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 90 bp CTCAGCTTAGTTGTGTGGAATTTAATTTCTACATCTTCATCCTCCTaGGAGTCAGCCAGAACACGTGAGGACTTATCAAAGACATCCTTA +
Preference number: 5 (lower is better)
Translates to: LSLVVWNLISTSSSS*ESARTREDLSKTSL
Trigger: TAAGGATGTCTTTGATAAGTCCTCACGTGTTCTGGCTGACTCCCAGGAGGATGAAGATGTAGAAATTAAATTCCACACAACTAAGCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp TTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTCCTCTGGCTTTCTTCTaGACTAGAATACTCATTATC +
Preference number: 5 (lower is better)
Translates to: FLLRHPNWESQPFDYKDSPLAFF*TRILII
Trigger: GATAATGAGTATTCTAGTCAAGAAGAAAGCCAGAGG...AGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTCTCTGCATAGAGTCATaGCAAGAGTCATGGGAACTG +
Preference number: 5 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSLCIES*QESWEL
Trigger: CAGTTCCCATGACTCTTGCAATGACTCTATGCAGAG...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GTTGTCTACCAAGAAGAGCTGACATCCTTGGAAATGTCTGTCCCTCTCTATTTACTTTCTTTACCAAAGTaGGAGGCTGCAAAACGATCA +
Preference number: 5 (lower is better)
Translates to: VVYQEELTSLEMSVPLYLLSLPK*EAAKRS
Trigger: TGATCGTTTTGCAGCCTCCAACTTTGGTAAAGAAAG...TAAATAGAGAGGGACAGACATTTCCAAGGATGTCAGCTCTTCTTGGTAGACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTAGGGCTCTGAAGTTCTaGCACCTTCATCCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSRALKF*HLHPEE
Trigger: TTCTTCAGGATGAAGGTGCAAGAACTTCAGAGCCCT...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTGGCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGATTGTTACTTTTAGACTaGGTTGTGAACTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LAHCGQCRVLSNFRLLSGLLLLD*VVNFLF
Trigger: GAAGAGGAAGTTCACAACCAAGTCTAAAAGTAACAA...TCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAGCTACACAGCTAACTCTCTTGTTACTTTTAGACTaGGTTGTGAACTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: ESQPFDYKDSKLATQLTLLLLLD*VVNFLF
Trigger: GAAGAGGAAGTTCACAACCAAGTCTAAAAGTAACAA...GAGAGTTAGCTGTGTAGCTAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTTCATCACTGGTAACCTaGTCCTCCTCTAATGCTTTT +
Preference number: 5 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTSSLVT*SSSNAF
Trigger: AAAAGCATTAGAGGAGGACAAGGTTACCAGTGATGA...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAATGGTTCTTGCTTATTaGTTTCTGGTTTGGGACTTC +
Preference number: 5 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLMVLAY*FLVWDF
Trigger: GAAGTCCCAAACCAGAAACAAATAAGCAAGAACCAT...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTAAGCTAAAGACGACTGATACCTaGCAGTTCTCTGATGATATA +
Preference number: 5 (lower is better)
Translates to: LRHPNWESQPFDYKDSKLKTTDT*QFSDDI
Trigger: TATATCATCAGAGAACTGCAAGGTATCAGTCGTCTT...TAGCTTAGAGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 90 bp TCAGAACCACACCCTTCGGTGCTTTCCCTTCTCGATACCTTGCTATaGTCTTCACTTTTGGTTTCCTCTTTCTCGGAAAATATCTTTAAT +
Preference number: 5 (lower is better)
Translates to: SEPHPSVLSLLDTLL*SSLLVSSFSENIFN
Trigger: ATTAAAGATATTTTCCGAGAAAGAGGAAACCAAAAGTGAAGATCATAGCAAGGTATCGAGAAGGGAAAGCACCGAAGGGTGTGGTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATATGGAGACATGTATATaGTACATGGTATGGGGCTAC +
Preference number: 5 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYMETCI*YMVWGY
Trigger: GTAGCCCCATACCATGTACAATATACATGTCTCCAT...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp TCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGATCAAGTCACGTTTCTCTCCAGGCAAGCTTTTaGGAAGAATTGATCCTACAG +
Preference number: 5 (lower is better)
Translates to: SLAISGYYQEIQRSSHVSLQASF*EELILQ
Trigger: CTGTAGGATCAATTCTTCCAAAAAGCTTGCCTGGAG...AGAAACGTGACTTGATCTTTGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTCTGTCCTTAATTGAATaGCTGCAATCACTTTGTAGC +
Preference number: 5 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTLSLIE*LQSLCS
Trigger: GCTACAAAGTGATTGCAGCAATTCAATTAAGGACAG...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS-3UTR CAA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTTTTGCAAAAGGTGAGTaGTTAGAAGCAAGAGAGAAG +
Preference number: 5 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTFAKGE*LEAREK
Trigger: CTTCTCTCTTGCTTCTAACAACTCACCTTTTGCAAA...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 90 bp ATCCATGTGGCAATTTTGTTGGACCTCTTTATCAGTGGTTGCTACTaGGCTGTGAAAACTCTGATTATTAACAGTGCTATGACTGTCTGT +
Preference number: 5 (lower is better)
Translates to: IHVAILLDLFISGCY*AVKTLIINSAMTVC
Trigger: ACAGACAGTCATAGCACTGTTAATAATCAGAGTTTTCACAGCTCAGTAGCAACCACTGATAAAGAGGTCCAACAAAATTGCCACATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 90 bp CTTTTTGGAAGAATTGATCCTACAGGGTCTCTGGAAGAACCACTCTaGAAGCATGAAGTACTCACAGATGGTTCTTGCTTATTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: LFGRIDPTGSLEEPL*KHEVLTDGSCLFVS
Trigger: AGAAACAAATAAGCAAGAACCATCTGTGAGTACTTCATGCTTTCAGAGTGGTTCTTCCAGAGACCCTGTAGGATCAATTCTTCCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp CATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCAAAGCTGGGAAGTTCTTaGATAAGATGTCTGCATACT +
Preference number: 5 (lower is better)
Translates to: HCGQCRVLSNFRLLSGNPKLGSS*IRCLHT
Trigger: AGTATGCAGACATCTTATCAAAGAACTTCCCAGCTT...TGGATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079978.13
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp ATTTTCTCCTTAGACATCCTAACTGGGAGAGTCAGCCATTTGACTACAAGGACTTGGGCAGAAATAGTGTaGTCATCTAACATAATGCTT +
Preference number: 5 (lower is better)
Translates to: IFSLDILTGRVSHLTTRTWAEIV*SSNIML
Trigger: AAGCATTATGTTAGATGACAACACTATTTCTGCCCA...AGTCCTTGTAGTCAAATGGCTGACTCTCCCAGTTAGGATGTCTAAGGAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp GCGCATTGTGGACAATGTAGAGTCCTTAGCAATTTCAGGCTACTATCAGGAAATCCCTTTGGTCAAAACTaGACTCAAATACTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: AHCGQCRVLSNFRLLSGNPFGQN*TQILEK
Trigger: TTTCTCAAGTATTTGAGTCAAGTTTTGACCAAAGGG...ATTTCCTGATAGTAGCCTGAAATTGCTAAGGACTCTACATTGTCCACAATGCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS-3UTR CAA 90 bp AAGAAATATTCTGCTAAGGGCTCCAAAGCACCATGTGAACCTGCTTTGACTTATTGCATGAGACACACATaGGTTTTAAAGAAATCGCCA +
Preference number: 5 (lower is better)
Translates to: KKYSAKGSKAPCEPALTYCMRHT*VLKKSP
Trigger: TGGCGATTTCTTTAAAACCAATGTGTGTCTCATGCA...ATAAGTCAAAGCAGGTTCACATGGTGCTTTGGAGCCCTTAGCAGAATATTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 90 bp TCATCCTCATCAGTCACTAAAGAAACAGACTTATTTTCAGTTGTCTaGATGAGACACACATTGGTTTTAAAGAAATCGCCAAGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: SSSSVTKETDLFSVV*MRHTLVLKKSPRVP
Trigger: TGGAACCCTTGGCGATTTCTTTAAAACCAATGTGTGTCTCATGCAGACAACTGAAAATAAGTCTGTTTCTTTAGTGACTGATGAGGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 90 bp CTGAATTTGCTACATAATATTCTTCAGAAAAGTCTCCCATATGATTaGCATTGGATGAGTGCCATGTTGGTGACATACTTTCCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: LNLLHNILQKSLPYD*HWMSAMLVTYFPAH
Trigger: ATGAGCAGGAAAGTATGTCACCAACATGGCACTCATCCAATGTCAATCATATGGGAGACTTTTCTGAAGAATATTATGTAGCAAATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 90 bp ATTCCTTCTGGATGGCAATTCTTGCTGGGATGCAGGTGTAGCAGTTaGAAATTTCCATTCTTGGTTAGGAAAATTATCTTGTTCATTTGT +
Preference number: 5 (lower is better)
Translates to: IPSGWQFLLGCRCSS*KFPFLVRKIILFIC
Trigger: ACAAATGAACAAGATAATTTTCCTAACCAAGAATGGAAATTTTCAACTGCTACACCTGCATCCCAGCAAGAATTGCCATCCAGAAGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 90 bp GCACTTGTAAGCAAAGTTTTGTCAGATTCTTTGGAAAACTGGTCTTaGAGAAGTTCACAATTCTTATGTTCATCTTTACTAAGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: ALVSKVLSDSLENWS*RSSQFLCSSLLSCG
Trigger: ACCACAGCTTAGTAAAGATGAACATAAGAATTGTGAACTTCTGCAAGACCAGTTTTCCAAAGAATCTGACAAAACTTTGCTTACAAGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp TGCATCCTGAGCCACCGAGGCCCTGGCGTTAGGGGATaGATTCCCTGTGCCCCGAACTTGGCCCAGGATGTC +
Preference number: 6 (lower is better)
Translates to: CILSHRGPGVRG*IPCAPNLAQDV
Trigger: GACATCCTGGGCCAAGTTCGGGGCACAGGGAATGCATCCCCTAACGCCAGGGCCTCGGTGGCTCAGGATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000145899.2
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS GCA 72 bp GCTGCCCTTAGCTGCCACATCCCTCAGGGGCATCACTaGCAGTCCTATCACACGATCCTCCCGGGCAAAGCA +
Preference number: 6 (lower is better)
Translates to: AALSCHIPQGHH*QSYHTILPGKA
Trigger: TGCTTTGCCCGGGAGGATCGTGTGATAGGACTGGCAGTGATGCCCCTGAGGGATGTGGCAGCTAAGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS TCA 72 bp AGTGTAGACCACTCCCCGGGCCCTTCCTCATCCGACTaGCGGATTGTCTTCAGTGCAATCCACACGGTGCCC +
Preference number: 6 (lower is better)
Translates to: SVDHSPGPSSSD*RIVFSAIHTVP
Trigger: GGGCACCGTGTGGATTGCACTGAAGACAATCCGTCAGTCGGATGAGGAAGGGCCCGGGGAGTGGTCTACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
CDS TCA 72 bp TCGGAACCAGTGTGCTCTGGCCTGGGTAAATGGCGATaGTGCGGTCTCCTCAGGAAGACTCTCCTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: SEPVCSGLGKWR*CGLLRKTLLGS
Trigger: GGACCCCAGGAGAGTCTTCCTGAGGAGACCGCATCATCGCCATTTACCCAGGCCAGAGCACACTGGTTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000168032.2
ENSMUST00000207569.2
CDS GCA 72 bp ATCCAGGAAGTCCATGAGAGGTCGCAGCACACTATCTaGATCCTGAGCCACCGAGGCCCTGGCGTTAGGGGA +
Preference number: 6 (lower is better)
Translates to: IQEVHERSQHTI*ILSHRGPGVRG
Trigger: TCCCCTAACGCCAGGGCCTCGGTGGCTCAGGATGCAGATAGTGTGCTGCGACCTCTCATGGACTTCCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000145899.2
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CCA 72 bp AAGAGCTGCTGTGGCAGCCGCACAGGAACAGGGAACTaGTGTACAGAAGCGTTGGGCTGGGTAGTCGTGTGG +
Preference number: 6 (lower is better)
Translates to: KSCCGSRTGTGN*CTEALGWVVVW
Trigger: CCACACGACTACCCAGCCCAACGCTTCTGTACACCAGTTCCCTGTTCCTGTGCGGCTGCCACAGCAGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
CDS CAA 90 bp CACCGAGGCCCTGGCGTTAGGGGATGCATTCCCTGTGCCCCGAACTaGGCCCAGGATGTCAGCCATTTGTCGAACACATTCATCAATCCG +
Preference number: 6 (lower is better)
Translates to: HRGPGVRGCIPCAPN*AQDVSHLSNTFINP
Trigger: CGGATTGATGAATGTGTTCGACAAATGGCTGACATCCTGGGCCAAGTTCGGGGCACAGGGAATGCATCCCCTAACGCCAGGGCCTCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000145899.2
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS TCA 72 bp AAGTCCATGAGAGGTCGCAGCACACTATCTGCATCCTaGGCCACCGAGGCCCTGGCGTTAGGGGATGCATTC +
Preference number: 6 (lower is better)
Translates to: KSMRGRSTLSAS*ATEALALGDAF
Trigger: GAATGCATCCCCTAACGCCAGGGCCTCGGTGGCTCAGGATGCAGATAGTGTGCTGCGACCTCTCATGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000145899.2
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CCA 72 bp GGTGGAGTCACAGCAAGGGAGTGGGAAGTTGTCCTCTaGCAGGGATCCAGTAGGACCCGTGGACTTGCTCTT +
Preference number: 6 (lower is better)
Translates to: GGVTAREWEVVL*QGSSRTRGLAL
Trigger: AAGAGCAAGTCCACGGGTCCTACTGGATCCCTGCCAGAGGACAACTTCCCACTCCCTTGCTGTGACTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 90 bp GAGGGGTCACCATCATCTGAAATCTCCTGCAGTTGGAGTCGGACCTaGGTAACCGCTCGGAACCAGTGTGCTCTGGCCTGGGTAAATGGC +
Preference number: 6 (lower is better)
Translates to: EGSPSSEISCSWSRT*VTARNQCALAWVNG
Trigger: GCCATTTACCCAGGCCAGAGCACACTGGTTCCGAGCGGTTACCAAGGTCCGACTCCAACTGCAGGAGATTTCAGATGATGGTGACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000168032.2
ENSMUST00000207569.2
CDS TCA 72 bp CACGGGGTCATCCACACCAGCCCCCTGGGCAGTCTGTaGGCGCACAAATGTCTTGATGAGAGTGTCTGTAGT +
Preference number: 6 (lower is better)
Translates to: HGVIHTSPLGSL*AHKCLDESVCS
Trigger: ACTACAGACACTCTCATCAAGACATTTGTGCGCTCACAGACTGCCCAGGGGGCTGGTGTGGATGACCCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000163653.8
ENSMUST00000207569.2
CDS CCA 72 bp ACCTTGGTAACCGCTCGGAACCAGTGTGCTCTGGCCTaGGTAAATGGCGATGATGCGGTCTCCTCAGGAAGA +
Preference number: 6 (lower is better)
Translates to: TLVTARNQCALA*VNGDDAVSSGR
Trigger: TCTTCCTGAGGAGACCGCATCATCGCCATTTACCCAGGCCAGAGCACACTGGTTCCGAGCGGTTACCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000168032.2
ENSMUST00000207569.2
CDS CCA 72 bp AGAATCCGGAGAATGGTCATGCCTGTCTCATCCATATaGATCTTCCGGCCCAGTGGGCACCAGCAGGCACAG +
Preference number: 6 (lower is better)
Translates to: RIRRMVMPVSSI*IFRPSGHQQAQ
Trigger: CTGTGCCTGCTGGTGCCCACTGGGCCGGAAGATCCATATGGATGAGACAGGCATGACCATTCTCCGGATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CCA 72 bp CAGACTTTGAAAGCTCCTGAGCACAGTCACTTGGCTTaGCCACCAACTGTTCTGTGGTCCCAGAGGGCAGCG +
Preference number: 6 (lower is better)
Translates to: QTLKAPEHSHLA*PPTVLWSQRAA
Trigger: CGCTGCCCTCTGGGACCACAGAACAGTTGGTGGCCAAGCCAAGTGACTGTGCTCAGGAGCTTTCAAAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp TCTCCCAGAGGCTCTTGCTGTTCATACCTACATCTCTaGCCAGGACCCCTAGGCAAAATGGGCCTGGCTTGG +
Preference number: 6 (lower is better)
Translates to: SPRGSCCSYLHL*PGPLGKMGLAW
Trigger: CCAAGCCAGGCCCATTTTGCCTAGGGGTCCTGGCCAGAGATGTAGGTATGAACAGCAAGAGCCTCTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 72 bp CCATCATCTGAAATCTCCTGCAGTTGGAGTCGGACCTaGGTAACCGCTCGGAACCAGTGTGCTCTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: PSSEISCSWSRT*VTARNQCALAW
Trigger: CCAGGCCAGAGCACACTGGTTCCGAGCGGTTACCAAGGTCCGACTCCAACTGCAGGAGATTTCAGATGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000168032.2
ENSMUST00000207569.2
CDS CAA 72 bp CCTGGCGTTAGGGGATGCATTCCCTGTGCCCCGAACTaGGCCCAGGATGTCAGCCATTTGTCGAACACATTC +
Preference number: 6 (lower is better)
Translates to: PGVRGCIPCAPN*AQDVSHLSNTF
Trigger: GAATGTGTTCGACAAATGGCTGACATCCTGGGCCAAGTTCGGGGCACAGGGAATGCATCCCCTAACGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000145899.2
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CAA 72 bp TTGTCCTCTGGCAGGGATCCAGTAGGACCCGTGGACTaGCTCTTGACACTGCATACAGTCTCTGCCCTGACC +
Preference number: 6 (lower is better)
Translates to: LSSGRDPVGPVD*LLTLHTVSALT
Trigger: GGTCAGGGCAGAGACTGTATGCAGTGTCAAGAGCAAGTCCACGGGTCCTACTGGATCCCTGCCAGAGGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 90 bp GCCTTTCCACTTCACCAGACTTTGAAAGCTCCTGAGCACAGTCACTaGGCTTGGCCACCAACTGTTCTGTGGTCCCAGAGGGCAGCGTAC +
Preference number: 6 (lower is better)
Translates to: AFPLHQTLKAPEHSH*AWPPTVLWSQRAAY
Trigger: GTACGCTGCCCTCTGGGACCACAGAACAGTTGGTGGCCAAGCCAAGTGACTGTGCTCAGGAGCTTTCAAAGTCTGGTGAAGTGGAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 90 bp AAGTTGTCCTCTGGCAGGGATCCAGTAGGACCCGTGGACTTGCTCTaGACACTGCATACAGTCTCTGCCCTGACCTTATCTGGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: KLSSGRDPVGPVDLL*TLHTVSALTLSGER
Trigger: CCTCTCCCCAGATAAGGTCAGGGCAGAGACTGTATGCAGTGTCAAGAGCAAGTCCACGGGTCCTACTGGATCCCTGCCAGAGGACAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 90 bp AGTGGGAAGTTGTCCTCTGGCAGGGATCCAGTAGGACCCGTGGACTaGCTCTTGACACTGCATACAGTCTCTGCCCTGACCTTATCTGGG +
Preference number: 6 (lower is better)
Translates to: SGKLSSGRDPVGPVD*LLTLHTVSALTLSG
Trigger: CCCAGATAAGGTCAGGGCAGAGACTGTATGCAGTGTCAAGAGCAAGTCCACGGGTCCTACTGGATCCCTGCCAGAGGACAACTTCCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 72 bp GCCCTGGGCACAAACCACCGTGATGGTAATTTTGGCTaGCCACTTGGAGGTGCCATCCAGGACACTCTGCTT +
Preference number: 6 (lower is better)
Translates to: ALGTNHRDGNFG*PLGGAIQDTLL
Trigger: AAGCAGAGTGTCCTGGATGGCACCTCCAAGTGGTCAGCCAAAATTACCATCACGGTGGTTTGTGCCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS GCA 72 bp CAAGTGGCAGTGGCTTCTTCCTTCGTAGATCTGGCATaGTGTCAATGCCATAGAGCCCTCCAGCTGGCCCTT +
Preference number: 6 (lower is better)
Translates to: QVAVASSFVDLA*CQCHRALQLAL
Trigger: AAGGGCCAGCTGGAGGGCTCTATGGCATTGACAGCATGCCAGATCTACGAAGGAAGAAGCCACTGCCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000168032.2
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS GCA 72 bp CATGGAGTTCCTGAGCCTTTTCCCCACTGCACACTTTaGCCAGGGAGCTGCTACCTACGTGCAAGCCTTCTA +
Preference number: 6 (lower is better)
Translates to: HGVPEPFPHCTL*PGSCYLRASLL
Trigger: TAGAAGGCTTGCACGTAGGTAGCAGCTCCCTGGGCAAAGTGTGCAGTGGGGAAAAGGCTCAGGAACTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CCA 72 bp AATGGCGATGATGCGGTCTCCTCAGGAAGACTCTCCTaGGGTCCTAGGACATGGTCCTTATGCAGCACCAGA +
Preference number: 6 (lower is better)
Translates to: NGDDAVSSGRLS*GPRTWSLCSTR
Trigger: TCTGGTGCTGCATAAGGACCATGTCCTAGGACCCCAGGAGAGTCTTCCTGAGGAGACCGCATCATCGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000168032.2
ENSMUST00000207569.2
CDS CCA 72 bp CTGGCGTTAGGGGATGCATTCCCTGTGCCCCGAACTTaGCCCAGGATGTCAGCCATTTGTCGAACACATTCA +
Preference number: 6 (lower is better)
Translates to: LALGDAFPVPRT*PRMSAICRTHS
Trigger: TGAATGTGTTCGACAAATGGCTGACATCCTGGGCCAAGTTCGGGGCACAGGGAATGCATCCCCTAACGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000145899.2
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CAA 72 bp CCCTGTGCCCCGAACTTGGCCCAGGATGTCAGCCATTaGTCGAACACATTCATCAATCCGCACCTGGAAGCT +
Preference number: 6 (lower is better)
Translates to: PCAPNLAQDVSH*SNTFINPHLEA
Trigger: AGCTTCCAGGTGCGGATTGATGAATGTGTTCGACAAATGGCTGACATCCTGGGCCAAGTTCGGGGCACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000145899.2
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CAA 90 bp CTGGCTCTGGCTCTGGCTCTGGCTCGAGTTCAAGAAGTGGTTGGCTaGAAGGGGGAAGCTCTTCAGCAATACAGGCAGGATCTGACTGTA +
Preference number: 6 (lower is better)
Translates to: LALALALARVQEVVG*KGEALQQYRQDLTV
Trigger: TACAGTCAGATCCTGCCTGTATTGCTGAAGAGCTTCCCCCTTCAAGCCAACCACTTCTTGAACTCGAGCCAGAGCCAGAGCCAGAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp CTCTGGCTCTGGCTCGAGTTCAAGAAGTGGTTGGCTTaGAGGGGGAAGCTCTTCAGCAATACAGGCAGGATC +
Preference number: 6 (lower is better)
Translates to: LWLWLEFKKWLA*RGKLFSNTGRI
Trigger: GATCCTGCCTGTATTGCTGAAGAGCTTCCCCCTTCAAGCCAACCACTTCTTGAACTCGAGCCAGAGCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp CCACCAGAAACCACACTGAGCAAGCTCTCACTTCCCTaGCTTGCTGGACTCTCCACTGAACAATCGTGGGCA +
Preference number: 6 (lower is better)
Translates to: PPETTLSKLSLP*LAGLSTEQSWA
Trigger: TGCCCACGATTGTTCAGTGGAGAGTCCAGCAAGTCAGGGAAGTGAGAGCTTGCTCAGTGTGGTTTCTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 72 bp TGTGGAGAAAAAGGAAGGAAGAGTGAACAGCCCTTCTaGTTGAGATCTGGCCCTTGGGAGAGCTGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: CGEKGRKSEQPF*LRSGPWESCRG
Trigger: GCCTCTGCAGCTCTCCCAAGGGCCAGATCTCAAGCAGAAGGGCTGTTCACTCTTCCTTCCTTTTTCTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp GAATGTGCTCTGCTTCCAGTGAGGCCTCTGTGTCTGTaGCCTGCAAAAGCCCCATGTCTCCTTCATCACTCA +
Preference number: 6 (lower is better)
Translates to: ECALLPVRPLCL*PAKAPCLLHHS
Trigger: TGAGTGATGAAGGAGACATGGGGCTTTTGCAGGGCACAGACACAGAGGCCTCACTGGAAGCAGAGCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp AAGGAGGGGTCACCATCATCTGAAATCTCCTGCAGTTaGAGTCGGACCTTGGTAACCGCTCGGAACCAGTGT +
Preference number: 6 (lower is better)
Translates to: KEGSPSSEISCS*SRTLVTARNQC
Trigger: ACACTGGTTCCGAGCGGTTACCAAGGTCCGACTCCAACTGCAGGAGATTTCAGATGATGGTGACCCCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000168032.2
ENSMUST00000207569.2
CDS CCA 72 bp TCTGGCTCTGGCTCTGGCTCGAGTTCAAGAAGTGGTTaGCTTGAAGGGGGAAGCTCTTCAGCAATACAGGCA +
Preference number: 6 (lower is better)
Translates to: SGSGSGSSSRSG*LEGGSSSAIQA
Trigger: TGCCTGTATTGCTGAAGAGCTTCCCCCTTCAAGCCAACCACTTCTTGAACTCGAGCCAGAGCCAGAGCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp AGAGTTCCCGAGAGTCAGATCCTGAAGCACAGGCAGTaGAGGCCAGAGAAGGTTGGTTATTGGCTTGCTGCT +
Preference number: 6 (lower is better)
Translates to: RVPESQILKHRQ*RPEKVGYWLAA
Trigger: AGCAGCAAGCCAATAACCAACCTTCTCTGGCCTCCACTGCCTGTGCTTCAGGATCTGACTCTCGGGAACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 72 bp GCTCTGGCTCTGGCTCGAGTTCAAGAAGTGGTTGGCTaGAAGGGGGAAGCTCTTCAGCAATACAGGCAGGAT +
Preference number: 6 (lower is better)
Translates to: ALALARVQEVVG*KGEALQQYRQD
Trigger: ATCCTGCCTGTATTGCTGAAGAGCTTCCCCCTTCAAGCCAACCACTTCTTGAACTCGAGCCAGAGCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 72 bp CTTCACCAGACTTTGAAAGCTCCTGAGCACAGTCACTaGGCTTGGCCACCAACTGTTCTGTGGTCCCAGAGG +
Preference number: 6 (lower is better)
Translates to: LHQTLKAPEHSH*AWPPTVLWSQR
Trigger: CCTCTGGGACCACAGAACAGTTGGTGGCCAAGCCAAGTGACTGTGCTCAGGAGCTTTCAAAGTCTGGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 72 bp TCTGGCAGGGATCCAGTAGGACCCGTGGACTTGCTCTaGACACTGCATACAGTCTCTGCCCTGACCTTATCT +
Preference number: 6 (lower is better)
Translates to: SGRDPVGPVDLL*TLHTVSALTLS
Trigger: AGATAAGGTCAGGGCAGAGACTGTATGCAGTGTCAAGAGCAAGTCCACGGGTCCTACTGGATCCCTGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 72 bp GTGCTGTCAGGACTCAGAGTCGCAAACCTTCTAGACTaGTCTGCCAAAAGGTCCTCCAGCTGCTTTGGGCTC +
Preference number: 6 (lower is better)
Translates to: VLSGLRVANLLD*SAKRSSSCFGL
Trigger: GAGCCCAAAGCAGCTGGAGGACCTTTTGGCAGACAAGTCTAGAAGGTTTGCGACTCTGAGTCCTGACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 72 bp GAGAAAAAGGAAGGAAGAGTGAACAGCCCTTCTGCTTaGGATCTGGCCCTTGGGAGAGCTGCAGAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: EKKEGRVNSPSA*DLALGRAAEAL
Trigger: CAAAGCCTCTGCAGCTCTCCCAAGGGCCAGATCTCAAGCAGAAGGGCTGTTCACTCTTCCTTCCTTTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp CCTCCTACAAGGCTGGGCAGTTACTGGAGCAATAGCTaGGAGGCTTTGCTTCTCCTCAGAAGACTGCTGCTT +
Preference number: 6 (lower is better)
Translates to: PPTRLGSYWSNS*EALLLLRRLLL
Trigger: AAGCAGCAGTCTTCTGAGGAGAAGCAAAGCCTCTCAGCTATTGCTCCAGTAACTGCCCAGCCTTGTAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp TCCTCAGGACTGATGGACCCATTGTTCTCCAGCTTCTaGAATACCCCCTGCAGAGCCAAACGAAAGTGCTGG +
Preference number: 6 (lower is better)
Translates to: SSGLMDPLFSSF*NTPCRAKRKCW
Trigger: CCAGCACTTTCGTTTGGCTCTGCAGGGGGTATTTCAGAAGCTGGAGAACAATGGGTCCATCAGTCCTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 72 bp GGGAACCACTCTCGTTGCTTTCCAGGTCCTCAGGACTaGTGGACCCATTGTTCTCCAGCTTCTGAAATACCC +
Preference number: 6 (lower is better)
Translates to: GNHSRCFPGPQD*WTHCSPASEIP
Trigger: GGGTATTTCAGAAGCTGGAGAACAATGGGTCCATCAGTCCTGAGGACCTGGAAAGCAACGAGAGTGGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 72 bp CATTGCTCCTCTGAGACAGAATCCGGAGAATGGTCATaGCTGTCTCATCCATATGGATCTTCCGGCCCAGTG +
Preference number: 6 (lower is better)
Translates to: HCSSETESGEWS*LSHPYGSSGPV
Trigger: CACTGGGCCGGAAGATCCATATGGATGAGACAGGCATGACCATTCTCCGGATTCTGTCTCAGAGGAGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS GCA 72 bp GGCTGGGCAGTTACTGGAGCAATAGCTGAGAGGCTTTaGTTCTCCTCAGAAGACTGCTGCTTCTCCTCCAAA +
Preference number: 6 (lower is better)
Translates to: GWAVTGAIAERL*FSSEDCCFSSK
Trigger: TTTGGAGGAGAAGCAGCAGTCTTCTGAGGAGAAGCAAAGCCTCTCAGCTATTGCTCCAGTAACTGCCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp TGCTCTGCTTCCAGTGAGGCCTCTGTGTCTGTGCCCTaGAAAAGCCCCATGTCTCCTTCATCACTCAAAGAT +
Preference number: 6 (lower is better)
Translates to: CSASSEASVSVP*KSPMSPSSLKD
Trigger: ATCTTTGAGTGATGAAGGAGACATGGGGCTTTTGCAGGGCACAGACACAGAGGCCTCACTGGAAGCAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp GAGCCTTTTCCCCACTGCACACTTTGCCCAGGGAGCTaGTACCTACGTGCAAGCCTTCTATTTCACTCAGTA +
Preference number: 6 (lower is better)
Translates to: EPFPHCTLCPGS*YLRASLLFHSV
Trigger: TACTGAGTGAAATAGAAGGCTTGCACGTAGGTAGCAGCTCCCTGGGCAAAGTGTGCAGTGGGGAAAAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 72 bp ATCTTTCTACATGGAGTTCCTGAGCCTTTTCCCCACTaGACACTTTGCCCAGGGAGCTGCTACCTACGTGCA +
Preference number: 6 (lower is better)
Translates to: IFLHGVPEPFPH*TLCPGSCYLRA
Trigger: TGCACGTAGGTAGCAGCTCCCTGGGCAAAGTGTGCAGTGGGGAAAAGGCTCAGGAACTCCATGTAGAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 72 bp GGTTCCTCTCTGGTAGCAACCCTGACCCCCACACTCTaGAAGAGGATGGATTTTTGCAAGATGAGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: GSSLVATLTPTL*KRMDFCKMRSL
Trigger: CAGAGACCTCATCTTGCAAAAATCCATCCTCTTGCAGAGTGTGGGGGTCAGGGTTGCTACCAGAGAGGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CCA 72 bp CCTACTACTGCTGGTAGGGCTGAGGGCCCGACGCTCTaGATAATCAAGGTCGTAACTCTGCATAGAGTCATT +
Preference number: 6 (lower is better)
Translates to: PTTAGRAEGPTL*IIKVVTLHRVI
Trigger: AATGACTCTATGCAGAGTTACGACCTTGATTATCCAGAGCGTCGGGCCCTCAGCCCTACCAGCAGTAGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
CDS CCA 72 bp CATTGTCACGAGAAAGAGACTCAGCTGCTGAGTCCCTaGAGGAGGTTTCCTGGTGGAAAACCCCTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: HCHEKETQLLSP*RRFPGGKPLLP
Trigger: AGGAAGAAGGGGTTTTCCACCAGGAAACCTCCTCCAGGGACTCAGCAGCTGAGTCTCTTTCTCGTGACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 72 bp CCAGCCCCCTGGGCAGTCTGTGAGCGCACAAATGTCTaGATGAGAGTGTCTGTAGTCTGTGTATACAGAGAG +
Preference number: 6 (lower is better)
Translates to: PAPWAVCERTNV*MRVSVVCVYRE
Trigger: CTCTCTGTATACACAGACTACAGACACTCTCATCAAGACATTTGTGCGCTCACAGACTGCCCAGGGGGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000163653.8
ENSMUST00000207569.2
CDS CAA 72 bp ACGAGGGCCCTGATGCTCAGAAGCCTGGGGTCCTCTTaGTTGATTCTGAGTCCTTATCTGGTGTGGTTCTGT +
Preference number: 6 (lower is better)
Translates to: TRALMLRSLGSS*LILSPYLVWFC
Trigger: ACAGAACCACACCAGATAAGGACTCAGAATCAACAAAGAGGACCCCAGGCTTCTGAGCATCAGGGCCCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 90 bp AGGCCCTGGGCACAAACCACCGTGATGGTAATTTTGGCTGACCACTaGGAGGTGCCATCCAGGACACTCTGCTTTACTGTTTTCATCTGC +
Preference number: 6 (lower is better)
Translates to: RPWAQTTVMVILADH*EVPSRTLCFTVFIC
Trigger: GCAGATGAAAACAGTAAAGCAGAGTGTCCTGGATGGCACCTCCAAGTGGTCAGCCAAAATTACCATCACGGTGGTTTGTGCCCAGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CAA 90 bp GGATGCATTCCCTGTGCCCCGAACTTGGCCCAGGATGTCAGCCATTaGTCGAACACATTCATCAATCCGCACCTGGAAGCTGTTTCCAAA +
Preference number: 6 (lower is better)
Translates to: GCIPCAPNLAQDVSH*SNTFINPHLEAVSK
Trigger: TTTGGAAACAGCTTCCAGGTGCGGATTGATGAATGTGTTCGACAAATGGCTGACATCCTGGGCCAAGTTCGGGGCACAGGGAATGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000145899.2
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CAA 90 bp GCTAGACACTTCATCCACAGAGCCCTGGACTTGGTTCAAGTGCTGTaGCAGCTCAGCAATCTCAGACTGAAGACGACTGATACCTTGCAG +
Preference number: 6 (lower is better)
Translates to: ARHFIHRALDLVQVL*QLSNLRLKTTDTLQ
Trigger: CTGCAAGGTATCAGTCGTCTTCAGTCTGAGATTGCTGAGCTGCAACAGCACTTGAACCAAGTCCAGGGCTCTGTGGATGAAGTGTCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 90 bp TCCTCCATCGTGCTGTCAGGACTCAGAGTCGCAAACCTTCTAGACTaGTCTGCCAAAAGGTCCTCCAGCTGCTTTGGGCTCAGAATATCA +
Preference number: 6 (lower is better)
Translates to: SSIVLSGLRVANLLD*SAKRSSSCFGLRIS
Trigger: TGATATTCTGAGCCCAAAGCAGCTGGAGGACCTTTTGGCAGACAAGTCTAGAAGGTTTGCGACTCTGAGTCCTGACAGCACGATGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 90 bp GTCCAAAGAAGTCTATCACTGTTCTCTGACTGGGAACCACTCTCGTaGCTTTCCAGGTCCTCAGGACTGATGGACCCATTGTTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: VQRSLSLFSDWEPLS*LSRSSGLMDPLFSS
Trigger: GCTGGAGAACAATGGGTCCATCAGTCCTGAGGACCTGGAAAGCAACGAGAGTGGTTCCCAGTCAGAGAACAGTGATAGACTTCTTTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 72 bp ATTCAAACCATTGTCACGAGAAAGAGACTCAGCTGCTaGGTCCCTGGAGGAGGTTTCCTGGTGGAAAACCCC +
Preference number: 6 (lower is better)
Translates to: IQTIVTRKRLSC*VPGGGFLVENP
Trigger: GGGGTTTTCCACCAGGAAACCTCCTCCAGGGACTCAGCAGCTGAGTCTCTTTCTCGTGACAATGGTTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp AACCACAGTTATGCTACAGGCACTGAGAGCAGACTCTaGATTGAGTCCTGCACAGGCAGCTTCTCCAGGCAA +
Preference number: 6 (lower is better)
Translates to: NHSYATGTESRL*IESCTGSFSRQ
Trigger: TTGCCTGGAGAAGCTGCCTGTGCAGGACTCAATTCAGAGTCTGCTCTCAGTGCCTGTAGCATAACTGTGGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp TGCTGGCTGAGCACAGTGTTCTTCCTTGTGTTTCTCTaGAGGACGAGCAGATCCAGACAGGTTGCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: CWLSTVFFLVFL*RTSRSRQVAVF
Trigger: GAAGACAGCAACCTGTCTGGATCTGCTCGTCCTTCAGAGAAACACAAGGAAGAACACTGTGCTCAGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp GTCAGGACTCAGAGTCGCAAACCTTCTAGACTTGTCTaGCAAAAGGTCCTCCAGCTGCTTTGGGCTCAGAAT +
Preference number: 6 (lower is better)
Translates to: VRTQSRKPSRLV*QKVLQLLWAQN
Trigger: ATTCTGAGCCCAAAGCAGCTGGAGGACCTTTTGGCAGACAAGTCTAGAAGGTTTGCGACTCTGAGTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CCA 72 bp ACTTCCTCTTCTTATCACTTTGGTGTGGGCCAACCATaGTCACTTCCACAAAAGGCCGGAACATACCCGCTG +
Preference number: 6 (lower is better)
Translates to: TSSSYHFGVGQP*SLPQKAGTYPL
Trigger: CAGCGGGTATGTTCCGGCCTTTTGTGGAAGTGACCATGGTTGGCCCACACCAAAGTGATAAGAAGAGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CCA 72 bp GTAGCCATAGCAGATGTAATCCCAGCTTTCCGTGACTaGACCAGTGACATAGCCAGATCACTGACAAGTGGC +
Preference number: 6 (lower is better)
Translates to: VAIADVIPAFRD*TSDIARSLTSG
Trigger: GCCACTTGTCAGTGATCTGGCTATGTCACTGGTCCAGTCACGGAAAGCTGGGATTACATCTGCTATGGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168032.2
CDS CAA 72 bp AGGGCCCTGATGCTCAGAAGCCTGGGGTCCTCTTTGTaGATTCTGAGTCCTTATCTGGTGTGGTTCTGTCAT +
Preference number: 6 (lower is better)
Translates to: RALMLRSLGSSL*ILSPYLVWFCH
Trigger: ATGACAGAACCACACCAGATAAGGACTCAGAATCAACAAAGAGGACCCCAGGCTTCTGAGCATCAGGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 90 bp ATCTTGCTCATGATACTGGTCCAGCTCACTCAGCAGAGAGCTTCCTaGACTCACATTACAGGAGGAGCCATACCTACTACTGCTGGTAGG +
Preference number: 6 (lower is better)
Translates to: ILLMILVQLTQQRAS*THITGGAIPTTAGR
Trigger: CCTACCAGCAGTAGTAGGTATGGCTCCTCCTGTAATGTGAGTCAAGGAAGCTCTCTGCTGAGTGAGCTGGACCAGTATCATGAGCAAGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
CDS CAA 90 bp GCTATGACTAGAATGAATGGAGTCCCTCTCCCGACCATCATCATCTaGCTCATGATACTGGTCCAGCTCACTCAGCAGAGAGCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: AMTRMNGVPLPTIII*LMILVQLTQQRASL
Trigger: CAAGGAAGCTCTCTGCTGAGTGAGCTGGACCAGTATCATGAGCAAGATGATGATGGTCGGGAGAGGGACTCCATTCATTCTAGTCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
CDS CAA 90 bp GCATCAACCACAGTTATGCTACAGGCACTGAGAGCAGACTCTGAATaGAGTCCTGCACAGGCAGCTTCTCCAGGCAAGCTTTTTGGAAGA +
Preference number: 6 (lower is better)
Translates to: ASTTVMLQALRADSE*SPAQAASPGKLFGR
Trigger: TCTTCCAAAAAGCTTGCCTGGAGAAGCTGCCTGTGCAGGACTCAATTCAGAGTCTGCTCTCAGTGCCTGTAGCATAACTGTGGTTGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 90 bp GGGGCAGGAGCTGTGCCTGTTCTGTATGCCTCTTGGATATACCTGTaGCACTGCATGCCATTAACACAGAGGTGCTTTGCTAGAAAGTTG +
Preference number: 6 (lower is better)
Translates to: GAGAVPVLYASWIYL*HCMPLTQRCFARKL
Trigger: CAACTTTCTAGCAAAGCACCTCTGTGTTAATGGCATGCAGTGCAACAGGTATATCCAAGAGGCATACAGAACAGGCACAGCTCCTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 90 bp TCCAACTGTGGTCTTGAAGTTGTTGCAAGCATGATAAAGACTCCTTaGGGGGATCCTCACACCCTTCTGACCACACTGGTTCCTCTCTGG +
Preference number: 6 (lower is better)
Translates to: SNCGLEVVASMIKTP*GDPHTLLTTLVPLW
Trigger: CCAGAGAGGAACCAGTGTGGTCAGAAGGGTGTGAGGATCCCCCAAAGGAGTCTTTATCATGCTTGCAACAACTTCAAGACCACAGTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 72 bp TTCTGTGGTCCCAGAGGGCAGCGTACAGATGTTAGCTaGCTTAGGACTACCACTAGGTACTTGAGAAGACTC +
Preference number: 6 (lower is better)
Translates to: FCGPRGQRTDVS*LRTTTRYLRRL
Trigger: GAGTCTTCTCAAGTACCTAGTGGTAGTCCTAAGTCAGCTAACATCTGTACGCTGCCCTCTGGGACCACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp CACATCATCAGGGTCAGCTTTTTCATAGTGCTCTACTaGTGCATGGCTGCTTGGGTTCAATTCCGCCAGACT +
Preference number: 6 (lower is better)
Translates to: HIIRVSFFIVLY*CMAAWVQFRQT
Trigger: AGTCTGGCGGAATTGAACCCAAGCAGCCATGCAGCAGTAGAGCACTATGAAAAAGCTGACCCTGATGATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp TGTGTTTCTCTGAAGGACGAGCAGATCCAGACAGGTTaGTGTCTTCACCCCAGTGTTCTTCAGGTGCTGAAA +
Preference number: 6 (lower is better)
Translates to: CVSLKDEQIQTG*CLHPSVLQVLK
Trigger: TTTCAGCACCTGAAGAACACTGGGGTGAAGACAGCAACCTGTCTGGATCTGCTCGTCCTTCAGAGAAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp CCACTGCACACTTTGCCCAGGGAGCTGCTACCTACGTaGAAGCCTTCTATTTCACTCAGTACTGAATCTACA +
Preference number: 6 (lower is better)
Translates to: PLHTLPRELLPT*KPSISLSTEST
Trigger: TGTAGATTCAGTACTGAGTGAAATAGAAGGCTTGCACGTAGGTAGCAGCTCCCTGGGCAAAGTGTGCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CCA 72 bp TGCTCATCACGGCTGGTACACCAGGACACATGTACTTaGATGACAAACATGCAAAGTGCGTCATGGCCTGAT +
Preference number: 6 (lower is better)
Translates to: CSSRLVHQDTCT*MTNMQSASWPD
Trigger: ATCAGGCCATGACGCACTTTGCATGTTTGTCATCCAAGTACATGTGTCCTGGTGTACCAGCCGTGATGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CCA 72 bp CTCTGGCCAGGACCCCTAGGCAAAATGGGCCTGGCTTaGTTTCTCTCTGAAGGATCTGAACAGTTTGTTATA +
Preference number: 6 (lower is better)
Translates to: LWPGPLGKMGLA*FLSEGSEQFVI
Trigger: TATAACAAACTGTTCAGATCCTTCAGAGAGAAACCAAGCCAGGCCCATTTTGCCTAGGGGTCCTGGCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 72 bp AGAATGAATGGAGTCCCTCTCCCGACCATCATCATCTaGCTCATGATACTGGTCCAGCTCACTCAGCAGAGA +
Preference number: 6 (lower is better)
Translates to: RMNGVPLPTIII*LMILVQLTQQR
Trigger: TCTCTGCTGAGTGAGCTGGACCAGTATCATGAGCAAGATGATGATGGTCGGGAGAGGGACTCCATTCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
CDS CAA 72 bp GCACAAACCACCGTGATGGTAATTTTGGCTGACCACTaGGAGGTGCCATCCAGGACACTCTGCTTTACTGTT +
Preference number: 6 (lower is better)
Translates to: AQTTVMVILADH*EVPSRTLCFTV
Trigger: AACAGTAAAGCAGAGTGTCCTGGATGGCACCTCCAAGTGGTCAGCCAAAATTACCATCACGGTGGTTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CAA 72 bp AGGTTGGTTATTGGCTTGCTGCTCAAAGCTACAAAGTaGGGGCAGGTCCCCATCTCTTTCTCCACTAGTGGT +
Preference number: 6 (lower is better)
Translates to: RLVIGLLLKATK*GQVPISFSTSG
Trigger: ACCACTAGTGGAGAAAGAGATGGGGACCTGCCCCAACTTTGTAGCTTTGAGCAGCAAGCCAATAACCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 72 bp TTCATCCACAGAGCCCTGGACTTGGTTCAAGTGCTGTaGCAGCTCAGCAATCTCAGACTGAAGACGACTGAT +
Preference number: 6 (lower is better)
Translates to: FIHRALDLVQVL*QLSNLRLKTTD
Trigger: ATCAGTCGTCTTCAGTCTGAGATTGCTGAGCTGCAACAGCACTTGAACCAAGTCCAGGGCTCTGTGGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 72 bp TACACAGCTAGACACTTCATCCACAGAGCCCTGGACTaGGTTCAAGTGCTGTTGCAGCTCAGCAATCTCAGA +
Preference number: 6 (lower is better)
Translates to: YTARHFIHRALD*VQVLLQLSNLR
Trigger: TCTGAGATTGCTGAGCTGCAACAGCACTTGAACCAAGTCCAGGGCTCTGTGGATGAAGTGTCTAGCTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 90 bp CAGCAAGACTACTACTCTGGTTGTCCAGGAGATCCTCACTTTGATTaGACTCAGAACCACACCCTTCGGTGCTTTCCCTTCTCGATACCT +
Preference number: 6 (lower is better)
Translates to: QQDYYSGCPGDPHFD*TQNHTLRCFPFSIP
Trigger: AGGTATCGAGAAGGGAAAGCACCGAAGGGTGTGGTTCTGAGTCAAATCAAAGTGAGGATCTCCTGGACAACCAGAGTAGTAGTCTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 90 bp ACATTACAGGAGGAGCCATACCTACTACTGCTGGTAGGGCTTTTGTaGGTTACTGTTTCCTTGGTATCCTCTGGAATGACTAGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: TLQEEPYLLLLVGLL*VTVSLVSSGMTSCP
Trigger: GGGGCAGCTAGTCATTCCAGAGGATACCAAGGAAACAGTAACCAACAAAAGCCCTACCAGCAGTAGTAGGTATGGCTCCTCCTGTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp ATGCTGGTCAGCAAATCCACTGTAGACTTTAAATCCTaGAGCCGCTCAGGGCTCCCAGCAGGAAAGTTATTC +
Preference number: 6 (lower is better)
Translates to: MLVSKSTVDFKS*SRSGLPAGKLF
Trigger: GAATAACTTTCCTGCTGGGAGCCCTGAGCGGCTTCAGGATTTAAAGTCTACAGTGGATTTGCTGACCAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS TCA 72 bp ACTACTCTGGTTGTCCAGGAGATCCTCACTTTGATTTaGCTCAGAACCACACCCTTCGGTGCTTTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: TTLVVQEILTLI*LRTTPFGAFPS
Trigger: AGAAGGGAAAGCACCGAAGGGTGTGGTTCTGAGTCAAATCAAAGTGAGGATCTCCTGGACAACCAGAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp TGCCATGTTACCAGAGGAGCTAGAGGGGTTAAAGATTaGACTCAGTGTTTTCCCATGGTCAGGAGTGGATGG +
Preference number: 6 (lower is better)
Translates to: CHVTRGARGVKD*TQCFPMVRSGW
Trigger: CCATCCACTCCTGACCATGGGAAAACACTGAGTTCAATCTTTAACCCCTCTAGCTCCTCTGGTAACATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp TGCAAGAGGATGGATTTTTGCAAGATGAGGTCTCTGTaGTCTAGATGGACAAGTTTCACCACAGTAGGCCGG +
Preference number: 6 (lower is better)
Translates to: CKRMDFCKMRSL*SRWTSFTTVGR
Trigger: CCGGCCTACTGTGGTGAAACTTGTCCATCTAGAGCACAGAGACCTCATCTTGCAAAAATCCATCCTCTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 72 bp AACCTTCTAGACTTGTCTGCCAAAAGGTCCTCCAGCTaGTTTGGGCTCAGAATATCAAGTCCAGCTTCACAG +
Preference number: 6 (lower is better)
Translates to: NLLDLSAKRSSS*FGLRISSPASQ
Trigger: CTGTGAAGCTGGACTTGATATTCTGAGCCCAAAGCAGCTGGAGGACCTTTTGGCAGACAAGTCTAGAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CCA 72 bp CTTGGTTGTGAACTTCCTCTTCTTATCACTTTGGTGTaGGCCAACCATGGTCACTTCCACAAAAGGCCGGAA +
Preference number: 6 (lower is better)
Translates to: LGCELPLLITLV*ANHGHFHKRPE
Trigger: TTCCGGCCTTTTGTGGAAGTGACCATGGTTGGCCCACACCAAAGTGATAAGAAGAGGAAGTTCACAACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CCA 72 bp AGCTTTTTCATAGTGCTCTACTGCTGCATGGCTGCTTaGGTTCAATTCCGCCAGACTCCCACATTTCCCAAA +
Preference number: 6 (lower is better)
Translates to: SFFIVLYCCMAA*VQFRQTPTFPK
Trigger: TTTGGGAAATGTGGGAGTCTGGCGGAATTGAACCCAAGCAGCCATGCAGCAGTAGAGCACTATGAAAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp CTTACTGTCCAAAGAAGTCTATCACTGTTCTCTGACTaGGAACCACTCTCGTTGCTTTCCAGGTCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: LTVQRSLSLFSD*EPLSLLSRSSG
Trigger: TCCTGAGGACCTGGAAAGCAACGAGAGTGGTTCCCAGTCAGAGAACAGTGATAGACTTCTTTGGACAGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 72 bp AGTGCAGGTGCTTCACACTTATGGCCATGCTTGCTCTaGGGCGATATCTTTCTGAAACTGTACTCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: SAGASHLWPCLL*GDIFLKLYSGC
Trigger: ACAGCCAGAGTACAGTTTCAGAAAGATATCGCCCAAGAGCAAGCATGGCCATAAGTGTGAAGCACCTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 72 bp GCACCAGTTCCTTTTGAAGAGTCTCTGGGAGACTCTTaGGAACCACCTGTTGAGACAGGTGGACTTGTTGAT +
Preference number: 6 (lower is better)
Translates to: APVPFEESLGDS*EPPVETGGLVD
Trigger: ATCAACAAGTCCACCTGTCTCAACAGGTGGTTCCAAAGAGTCTCCCAGAGACTCTTCAAAAGGAACTGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 72 bp AAACTGAAAGCAGAGCTGCTGCGAGAGGCATCCTTCTaGGTGCTTAAGCTAGCTGTGGAGAAAAAGGAAGGA +
Preference number: 6 (lower is better)
Translates to: KLKAELLREASF*VLKLAVEKKEG
Trigger: TCCTTCCTTTTTCTCCACAGCTAGCTTAAGCACCAAGAAGGATGCCTCTCGCAGCAGCTCTGCTTTCAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 72 bp CTGGGTCTGGAGAAGCAGGTAAATCCAGGATCTGTGTaGAAAGACTGTCAGAGCCATGTTCCAAAGGCAAGT +
Preference number: 6 (lower is better)
Translates to: LGLEKQVNPGSV*KDCQSHVPKAS
Trigger: ACTTGCCTTTGGAACATGGCTCTGACAGTCTTTCAACACAGATCCTGGATTTACCTGCTTCTCCAGACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 72 bp CTACTGCTGGTAGGGCTTTTGTTGGTTACTGTTTCCTaGGTATCCTCTGGAATGACTAGCTGCCCCACATTC +
Preference number: 6 (lower is better)
Translates to: LLLVGLLLVTVS*VSSGMTSCPTF
Trigger: GAATGTGGGGCAGCTAGTCATTCCAGAGGATACCAAGGAAACAGTAACCAACAAAAGCCCTACCAGCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 72 bp GGTCTTGAAGTTGTTGCAAGCATGATAAAGACTCCTTaGGGGGATCCTCACACCCTTCTGACCACACTGGTT +
Preference number: 6 (lower is better)
Translates to: GLEVVASMIKTP*GDPHTLLTTLV
Trigger: AACCAGTGTGGTCAGAAGGGTGTGAGGATCCCCCAAAGGAGTCTTTATCATGCTTGCAACAACTTCAAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 90 bp CTGTATGCCCTGGGTCTGGAGAAGCAGGTAAATCCAGGATCTGTGTaGAAAGACTGTCAGAGCCATGTTCCAAAGGCAAGTTCAATAAGC +
Preference number: 6 (lower is better)
Translates to: LYALGLEKQVNPGSV*KDCQSHVPKASSIS
Trigger: GCTTATTGAACTTGCCTTTGGAACATGGCTCTGACAGTCTTTCAACACAGATCCTGGATTTACCTGCTTCTCCAGACCCAGGGCATACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 90 bp CTCACATTACAGGAGGAGCCATACCTACTACTGCTGGTAGGGCTTTaGTTGGTTACTGTTTCCTTGGTATCCTCTGGAATGACTAGCTGC +
Preference number: 6 (lower is better)
Translates to: LTLQEEPYLLLLVGL*LVTVSLVSSGMTSC
Trigger: GCAGCTAGTCATTCCAGAGGATACCAAGGAAACAGTAACCAACAAAAGCCCTACCAGCAGTAGTAGGTATGGCTCCTCCTGTAATGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 90 bp TGCTTTGGGCTCAGAATATCAAGTCCAGCTTCACAGCCTAGCATCTaGTCCTCTGTGTTTACCATATCTGCTTTCAGTGGTCCAGACAGT +
Preference number: 6 (lower is better)
Translates to: CFGLRISSPASQPSI*SSVFTISAFSGPDS
Trigger: ACTGTCTGGACCACTGAAAGCAGATATGGTAAACACAGAGGACAAGATGCTAGGCTGTGAAGCTGGACTTGATATTCTGAGCCCAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 72 bp CATCACGGCTGGTACACCAGGACACATGTACTTGGATaGCAAACATGCAAAGTGCGTCATGGCCTGATAAAT +
Preference number: 6 (lower is better)
Translates to: HHGWYTRTHVLG*QTCKVRHGLIN
Trigger: ATTTATCAGGCCATGACGCACTTTGCATGTTTGTCATCCAAGTACATGTGTCCTGGTGTACCAGCCGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS TCA 72 bp CCTAATACCTTTCCCATCATGTACCTGGGCAGTCTGTaGGCGCACAAATGTCTTGATGAGAGTGTCTGTAGT +
Preference number: 6 (lower is better)
Translates to: PNTFPIMYLGSL*AHKCLDESVCS
Trigger: ACTACAGACACTCTCATCAAGACATTTGTGCGCTCACAGACTGCCCAGGTACATGATGGGAAAGGTATTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107953.9
ENSMUST00000207708.2
CDS TCA 72 bp ACTTATGGCCATGCTTGCTCTTGGGCGATATCTTTCTaGAACTGTACTCTGGCTGTTTTTGTTGGCCGTGGT +
Preference number: 6 (lower is better)
Translates to: TYGHACSWAISF*NCTLAVFVGRG
Trigger: ACCACGGCCAACAAAAACAGCCAGAGTACAGTTTCAGAAAGATATCGCCCAAGAGCAAGCATGGCCATAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp ACAGGCAGCTTCTCCAGGCAAGCTTTTTGGAAGAATTaGTCCTACAGGGTCTCTGGAAGAACCACTCTGAAA +
Preference number: 6 (lower is better)
Translates to: TGSFSRQAFWKN*SYRVSGRTTLK
Trigger: TTTCAGAGTGGTTCTTCCAGAGACCCTGTAGGATCAATTCTTCCAAAAAGCTTGCCTGGAGAAGCTGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp GCTACCTACGTGCAAGCCTTCTATTTCACTCAGTACTaGATCTACACAGCTAGACACTTCATCCACAGAGCC +
Preference number: 6 (lower is better)
Translates to: ATYVQAFYFTQY*IYTARHFIHRA
Trigger: GGCTCTGTGGATGAAGTGTCTAGCTGTGTAGATTCAGTACTGAGTGAAATAGAAGGCTTGCACGTAGGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 72 bp CAATATGAACCATGTTACTCAAAGTCTCAGGCCCTATaGTCACTTCCTCCATCGTGCTGTCAGGACTCAGAG +
Preference number: 6 (lower is better)
Translates to: QYEPCYSKSQAL*SLPPSCCQDSE
Trigger: CTCTGAGTCCTGACAGCACGATGGAGGAAGTGATCATAGGGCCTGAGACTTTGAGTAACATGGTTCATATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CCA 72 bp ACATGGTCCTTATGCAGCACCAGATCTGAAGGAGGGTaGATTGTAGCATCATCTCTCATCTCCTTGGATTCA +
Preference number: 6 (lower is better)
Translates to: TWSLCSTRSEGG*IVASSLISLDS
Trigger: TGAATCCAAGGAGATGAGAGATGATGCTACAATCCACCCTCCTTCAGATCTGGTGCTGCATAAGGACCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
CDS CCA 72 bp CACCAGTTCCTTTTGAAGAGTCTCTGGGAGACTCTTTaGAACCACCTGTTGAGACAGGTGGACTTGTTGATT +
Preference number: 6 (lower is better)
Translates to: HQFLLKSLWETL*NHLLRQVDLLI
Trigger: AATCAACAAGTCCACCTGTCTCAACAGGTGGTTCCAAAGAGTCTCCCAGAGACTCTTCAAAAGGAACTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp CTTTGTCATAACATCTCCTGTGTCTACAGAAACTACTaGCCTCCTACAAGGCTGGGCAGTTACTGGAGCAAT +
Preference number: 6 (lower is better)
Translates to: LCHNISCVYRNY*PPTRLGSYWSN
Trigger: ATTGCTCCAGTAACTGCCCAGCCTTGTAGGAGGCCAGTAGTTTCTGTAGACACAGGAGATGTTATGACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp GGATGGGAAGTGAAGCTTTGGCCAACTAGCCATATTTaGGATCTCAAAACGAGGTCTTGTCTGCTCTGTTTC +
Preference number: 6 (lower is better)
Translates to: GWEVKLWPTSHI*DLKTRSCLLCF
Trigger: GAAACAGAGCAGACAAGACCTCGTTTTGAGATCCCAAATATGGCTAGTTGGCCAAAGCTTCACTTCCCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 72 bp TCATGTACCTGGGCAGTCTGTGAGCGCACAAATGTCTaGATGAGAGTGTCTGTAGTCTGTGTATACAGAGAG +
Preference number: 6 (lower is better)
Translates to: SCTWAVCERTNV*MRVSVVCVYRE
Trigger: CTCTCTGTATACACAGACTACAGACACTCTCATCAAGACATTTGTGCGCTCACAGACTGCCCAGGTACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107953.9
ENSMUST00000207708.2
CDS CAA 72 bp CTGGAAAGTGCAGGTGCTTCACACTTATGGCCATGCTaGCTCTTGGGCGATATCTTTCTGAAACTGTACTCT +
Preference number: 6 (lower is better)
Translates to: LESAGASHLWPC*LLGDIFLKLYS
Trigger: AGAGTACAGTTTCAGAAAGATATCGCCCAAGAGCAAGCATGGCCATAAGTGTGAAGCACCTGCACTTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 90 bp CTGTTGCACTGCATGCCATTAACACAGAGGTGCTTTGCTAGAAAGTaGTCCACCAGTTCCATAGTGTTTTCCCCATCATGTTCAGGAAGT +
Preference number: 6 (lower is better)
Translates to: LLHCMPLTQRCFARK*STSSIVFSPSCSGS
Trigger: ACTTCCTGAACATGATGGGGAAAACACTATGGAACTGGTGGACAACTTTCTAGCAAAGCACCTCTGTGTTAATGGCATGCAGTGCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 72 bp ATCTTCATACGGTCCTTCATGGCCATGATAATGTTCTaGGTTCGGTCCTCAGCTCCATGCTTAGAGCTCTTT +
Preference number: 6 (lower is better)
Translates to: IFIRSFMAMIMF*VRSSAPCLELF
Trigger: AAAGAGCTCTAAGCATGGAGCTGAGGACCGAACTCAGAACATTATCATGGCCATGAAGGACCGTATGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000168032.2
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS TCA 72 bp AAGGTCCTGATCATCACTAACAACCAAAACCGGAGATaGCTTTGCAGGCATCTGCTCTGGGTCTCCTTTATT +
Preference number: 6 (lower is better)
Translates to: KVLIITNNQNRR*LCRHLLWVSFI
Trigger: AATAAAGGAGACCCAGAGCAGATGCCTGCAAAGTCATCTCCGGTTTTGGTTGTTAGTGATGATCAGGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp TGGTTCAAGTGCTGTTGCAGCTCAGCAATCTCAGACTaGAGACGACTGATACCTTGCAGTTCTCTGATGATA +
Preference number: 6 (lower is better)
Translates to: WFKCCCSSAISD*RRLIPCSSLMI
Trigger: TATCATCAGAGAACTGCAAGGTATCAGTCGTCTTCAGTCTGAGATTGCTGAGCTGCAACAGCACTTGAACCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 72 bp TTCACCACAACAATCACTGGTTACCCAGGATGCTCCTaGTGTTCCTTTTACTTCCTCCTGCAACTTAGACAC +
Preference number: 6 (lower is better)
Translates to: FTTTITGYPGCS*CSFYFLLQLRH
Trigger: GTGTCTAAGTTGCAGGAGGAAGTAAAAGGAACATCAGGAGCATCCTGGGTAACCAGTGATTGTTGTGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 72 bp GTCTCTGCACATACTTGTTCTAAACTCAGTTTGCCTTaGTTAGGAGAGTCAGGCCTGGAACAAGTCTCGCTT +
Preference number: 6 (lower is better)
Translates to: VSAHTCSKLSLP*LGESGLEQVSL
Trigger: AAGCGAGACTTGTTCCAGGCCTGACTCTCCTAATCAAGGCAAACTGAGTTTAGAACAAGTATGTGCAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 72 bp TATCTGGAAAGTGCAGGTGCTTCACACTTATGGCCATaGTTGCTCTTGGGCGATATCTTTCTGAAACTGTAC +
Preference number: 6 (lower is better)
Translates to: YLESAGASHLWP*LLLGDIFLKLY
Trigger: GTACAGTTTCAGAAAGATATCGCCCAAGAGCAAGCATGGCCATAAGTGTGAAGCACCTGCACTTTCCAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp CCTGTTCTGTATGCCTCTTGGATATACCTGTTGCACTaGATGCCATTAACACAGAGGTGCTTTGCTAGAAAG +
Preference number: 6 (lower is better)
Translates to: PVLYASWIYLLH*MPLTQRCFARK
Trigger: CTTTCTAGCAAAGCACCTCTGTGTTAATGGCATGCAGTGCAACAGGTATATCCAAGAGGCATACAGAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 72 bp ACCCAGGATGCTCCTGATGTTCCTTTTACTTCCTCCTaGAACTTAGACACATCACTCTGTTTTGCTAAGCCA +
Preference number: 6 (lower is better)
Translates to: TQDAPDVPFTSS*NLDTSLCFAKP
Trigger: TGGCTTAGCAAAACAGAGTGATGTGTCTAAGTTGCAGGAGGAAGTAAAAGGAACATCAGGAGCATCCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CCA 72 bp TCCCACACGCGTACCTTAATTCGATCAGAAGAGTTGTaGCACTCAAAATGGAACTTCTCTTCCCAAACAGGA +
Preference number: 6 (lower is better)
Translates to: SHTRTLIRSEEL*HSKWNFSSQTG
Trigger: TCCTGTTTGGGAAGAGAAGTTCCATTTTGAGTGCCACAACTCTTCTGATCGAATTAAGGTACGCGTGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CCA 72 bp TGGGTCCCTCAACAAAGGAAGGGGTCATATCTTCCATaGAGCATCTGGACAAATCTCCAACTGTGTTTACAT +
Preference number: 6 (lower is better)
Translates to: WVPQQRKGSYLP*SIWTNLQLCLH
Trigger: ATGTAAACACAGTTGGAGATTTGTCCAGATGCTCCATGGAAGATATGACCCCTTCCTTTGTTGAGGGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp GTGGATGGAGGAGAGAAAGTTCACCACAACAATCACTaGTTACCCAGGATGCTCCTGATGTTCCTTTTACTT +
Preference number: 6 (lower is better)
Translates to: VDGGEKVHHNNH*LPRMLLMFLLL
Trigger: AAGTAAAAGGAACATCAGGAGCATCCTGGGTAACCAGTGATTGTTGTGGTGAACTTTCTCTCCTCCATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 72 bp TGCTTTACTGTTTTCATCTGCTGCACATGCGCAACTTaGCTCACTGTGAACACATCCCGGATAACCTCAAAG +
Preference number: 6 (lower is better)
Translates to: CFTVFICCTCAT*LTVNTSRITSK
Trigger: CTTTGAGGTTATCCGGGATGTGTTCACAGTGAGCAAAGTTGCGCATGTGCAGCAGATGAAAACAGTAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CAA 72 bp GTACTGCCAGCTACACCACAACGCTCCACAGTATCTTaGGCACTTTGTTGTGGTTGGTCTTTTGATAGAGAA +
Preference number: 6 (lower is better)
Translates to: VLPATPQRSTVS*ALCCGWSFDRE
Trigger: TTCTCTATCAAAAGACCAACCACAACAAAGTGCCAAAGATACTGTGGAGCGTTGTGGTGTAGCTGGCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 90 bp GTTGTTACTTTTAGACTTGGTTGTGAACTTCCTCTTCTTATCACTTaGGTGTGGGCCAACCATGGTCACTTCCACAAAAGGCCGGAACAT +
Preference number: 6 (lower is better)
Translates to: VVTFRLGCELPLLIT*VWANHGHFHKRPEH
Trigger: ATGTTCCGGCCTTTTGTGGAAGTGACCATGGTTGGCCCACACCAAAGTGATAAGAAGAGGAAGTTCACAACCAAGTCTAAAAGTAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CAA 90 bp TTTGCAAAGGTACTGCCAGCTACACCACAACGCTCCACAGTATCTTaGGCACTTTGTTGTGGTTGGTCTTTTGATAGAGAAAGCTCTACA +
Preference number: 6 (lower is better)
Translates to: FAKVLPATPQRSTVS*ALCCGWSFDRESST
Trigger: TGTAGAGCTTTCTCTATCAAAAGACCAACCACAACAAAGTGCCAAAGATACTGTGGAGCGTTGTGGTGTAGCTGGCAGTACCTTTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 90 bp TGTTCAGTACAAACATCTAGATCATTGAGCTTCTCATTCAAACCATaGTCACGAGAAAGAGACTCAGCTGCTGAGTCCCTGGAGGAGGTT +
Preference number: 6 (lower is better)
Translates to: CSVQTSRSLSFSFKP*SRERDSAAESLEEV
Trigger: AACCTCCTCCAGGGACTCAGCAGCTGAGTCTCTTTCTCGTGACAATGGTTTGAATGAGAAGCTCAATGATCTAGATGTTTGTACTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp GCTTTGTGCCTGAACCTACCTTTTCTGTCAGTGAACTaGATAAAGAACCAACAGCGCACTTTACCCCATTCA +
Preference number: 6 (lower is better)
Translates to: ALCLNLPFLSVN*IKNQQRTLPHS
Trigger: TGAATGGGGTAAAGTGCGCTGTTGGTTCTTTATTCAGTTCACTGACAGAAAAGGTAGGTTCAGGCACAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp CTGCCATGTCTGACAGCATCCTTATCATCAGTTGTTTaGCAGGATAATAAAGGCTGTGCAGAAAGGTCCTTC +
Preference number: 6 (lower is better)
Translates to: LPCLTASLSSVV*QDNKGCAERSF
Trigger: GAAGGACCTTTCTGCACAGCCTTTATTATCCTGTCAAACAACTGATGATAAGGATGCTGTCAGACATGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp CACCCTTCGGTGCTTTCCCTTCTCGATACCTTGCTATaGTCTTCACTTTTGGTTTCCTCTTTCTCGGAAAAT +
Preference number: 6 (lower is better)
Translates to: HPSVLSLLDTLL*SSLLVSSFSEN
Trigger: ATTTTCCGAGAAAGAGGAAACCAAAAGTGAAGATCATAGCAAGGTATCGAGAAGGGAAAGCACCGAAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp GTTGAGACAGGTGGACTTGTTGATTGCTGTACCTGGTaGTCTCTGACAGGTACCTCTTTTTCATTCAAACCA +
Preference number: 6 (lower is better)
Translates to: VETGGLVDCCTW*SLTGTSFSFKP
Trigger: TGGTTTGAATGAAAAAGAGGTACCTGTCAGAGATCACCAGGTACAGCAATCAACAAGTCCACCTGTCTCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp GACCATAATCATAGCCTTCCAAGTCTGTGTTCCAGGTaGTGCTCTTCACAAATCCATTTTTGTAAGGGCACA +
Preference number: 6 (lower is better)
Translates to: DHNHSLPSLCSR*CSSQIHFCKGT
Trigger: TGTGCCCTTACAAAAATGGATTTGTGAAGAGCAGCACCTGGAACACAGACTTGGAAGGCTATGATTATGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp GGCTGGCAACTGATTCACCTGAAAATCAAAAGCAGTTaGTCCTTCTGCTCCTCCTTTACTGGAACTCATTTT +
Preference number: 6 (lower is better)
Translates to: GWQLIHLKIKSS*SFCSSFTGTHF
Trigger: AAAATGAGTTCCAGTAAAGGAGGAGCAGAAGGAGCAACTGCTTTTGATTTTCAGGTGAATCAGTTGCCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp ATATACCTGTTGCACTGCATGCCATTAACACAGAGGTaGTTTGCTAGAAAGTTGTCCACCAGTTCCATAGTG +
Preference number: 6 (lower is better)
Translates to: IYLLHCMPLTQR*FARKLSTSSIV
Trigger: CACTATGGAACTGGTGGACAACTTTCTAGCAAAGCACCTCTGTGTTAATGGCATGCAGTGCAACAGGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS GCA 72 bp AAATACCCCCTGCAGAGCCAAACGAAAGTGCTGGATTaGTCGACTCAGCTTAGTTGTGTGGAATTTAATTTC +
Preference number: 6 (lower is better)
Translates to: KYPLQSQTKVLD*STQLSCVEFNF
Trigger: GAAATTAAATTCCACACAACTAAGCTGAGTCGAGCAATCCAGCACTTTCGTTTGGCTCTGCAGGGGGTATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CCA 72 bp CTTGCTCTTGGGCGATATCTTTCTGAAACTGTACTCTaGCTGTTTTTGTTGGCCGTGGTTCTCATCAGTTTT +
Preference number: 6 (lower is better)
Translates to: LALGRYLSETVL*LFLLAVVLISF
Trigger: AAAACTGATGAGAACCACGGCCAACAAAAACAGCCAGAGTACAGTTTCAGAAAGATATCGCCCAAGAGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp GCAAGCTTTTTGGAAGAATTGATCCTACAGGGTCTCTaGAAGAACCACTCTGAAAGCATGAAGTACTCACAG +
Preference number: 6 (lower is better)
Translates to: ASFLEELILQGL*KNHSESMKYSQ
Trigger: CTGTGAGTACTTCATGCTTTCAGAGTGGTTCTTCCAGAGACCCTGTAGGATCAATTCTTCCAAAAAGCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp CAGGAAGTCCATATAGATAAAGAATGGCTTCCTCTCTaGATCTTTCTACATGGAGTTCCTGAGCCTTTTCCC +
Preference number: 6 (lower is better)
Translates to: QEVHIDKEWLPL*IFLHGVPEPFP
Trigger: GGGAAAAGGCTCAGGAACTCCATGTAGAAAGATCCAGAGAGGAAGCCATTCTTTATCTATATGGACTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 72 bp TCATCCCACACGCGTACCTTAATTCGATCAGAAGAGTaGTGGCACTCAAAATGGAACTTCTCTTCCCAAACA +
Preference number: 6 (lower is better)
Translates to: SSHTRTLIRSEE*WHSKWNFSSQT
Trigger: TGTTTGGGAAGAGAAGTTCCATTTTGAGTGCCACAACTCTTCTGATCGAATTAAGGTACGCGTGTGGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CAA 72 bp GCATGTTGTTCATCAGGATACAGGGCAGTCTCTCCTTaGTGCAGTAAGCTGGGAAGTTCTTTGATAAGATGT +
Preference number: 6 (lower is better)
Translates to: ACCSSGYRAVSP*CSKLGSSLIRC
Trigger: ACATCTTATCAAAGAACTTCCCAGCTTACTGCACAAAGGAGAGACTGCCCTGTATCCTGATGAACAACATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000145899.2
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CAA 72 bp TTTAGACTTGGTTGTGAACTTCCTCTTCTTATCACTTaGGTGTGGGCCAACCATGGTCACTTCCACAAAAGG +
Preference number: 6 (lower is better)
Translates to: FRLGCELPLLIT*VWANHGHFHKR
Trigger: CCTTTTGTGGAAGTGACCATGGTTGGCCCACACCAAAGTGATAAGAAGAGGAAGTTCACAACCAAGTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CAA 72 bp CAAACATCTAGATCATTGAGCTTCTCATTCAAACCATaGTCACGAGAAAGAGACTCAGCTGCTGAGTCCCTG +
Preference number: 6 (lower is better)
Translates to: QTSRSLSFSFKP*SRERDSAAESL
Trigger: CAGGGACTCAGCAGCTGAGTCTCTTTCTCGTGACAATGGTTTGAATGAGAAGCTCAATGATCTAGATGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 72 bp TGCATGCCATTAACACAGAGGTGCTTTGCTAGAAAGTaGTCCACCAGTTCCATAGTGTTTTCCCCATCATGT +
Preference number: 6 (lower is better)
Translates to: CMPLTQRCFARK*STSSIVFSPSC
Trigger: ACATGATGGGGAAAACACTATGGAACTGGTGGACAACTTTCTAGCAAAGCACCTCTGTGTTAATGGCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 90 bp ACCAGATCTGAAGGAGGGTGGATTGTAGCATCATCTCTCATCTCCTaGGATTCACCTGTTTTCTCTTTTTCTGATTCACATGTCACTTCC +
Preference number: 6 (lower is better)
Translates to: TRSEGGWIVASSLIS*DSPVFSFSDSHVTS
Trigger: GGAAGTGACATGTGAATCAGAAAAAGAGAAAACAGGTGAATCCAAGGAGATGAGAGATGATGCTACAATCCACCCTCCTTCAGATCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
CDS TCA 72 bp TCCTTTTTACAGCTCTCAGGAGAAGTGAACAGGAGCTaGCTGAATGATTTTCTTAGTGGCTCAAGGAAATCC +
Preference number: 6 (lower is better)
Translates to: SFLQLSGEVNRS*LNDFLSGSRKS
Trigger: GGATTTCCTTGAGCCACTAAGAAAATCATTCAGTCAGCTCCTGTTCACTTCTCCTGAGAGCTGTAAAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp TCCATCTTCCTCCAGCTTAAGAATTGTTACAGATTCTaGCGACGTCTCCTTTTTACAGCTCTCAGGAGAAGT +
Preference number: 6 (lower is better)
Translates to: SIFLQLKNCYRF*RRLLFTALRRS
Trigger: ACTTCTCCTGAGAGCTGTAAAAAGGAGACGTCGTCAGAATCTGTAACAATTCTTAAGCTGGAGGAAGATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp GGGAAATGCCACTTGTGTAAGATTCACACCTTCTTCTaGGAGCGCTACAGTTATGTGTTGTTCTTTAAGCAC +
Preference number: 6 (lower is better)
Translates to: GKCHLCKIHTFF*ERYSYVLFFKH
Trigger: GTGCTTAAAGAACAACACATAACTGTAGCGCTCTCAGAAGAAGGTGTGAATCTTACACAAGTGGCATTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp TCCTACAGGGTCTCTGGAAGAACCACTCTGAAAGCATaGAGTACTCACAGATGGTTCTTGCTTATTTGTTTC +
Preference number: 6 (lower is better)
Translates to: SYRVSGRTTLKA*STHRWFLLICF
Trigger: GAAACAAATAAGCAAGAACCATCTGTGAGTACTTCATGCTTTCAGAGTGGTTCTTCCAGAGACCCTGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp AGAATTGATCCTACAGGGTCTCTGGAAGAACCACTCTaGAAGCATGAAGTACTCACAGATGGTTCTTGCTTA +
Preference number: 6 (lower is better)
Translates to: RIDPTGSLEEPL*KHEVLTDGSCL
Trigger: TAAGCAAGAACCATCTGTGAGTACTTCATGCTTTCAGAGTGGTTCTTCCAGAGACCCTGTAGGATCAATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp TGGGCAGTACAGTTCTCTTCTTCATTCAGGTCAATATaGACCATGTTACTCAAAGTCTCAGGCCCTATGATC +
Preference number: 6 (lower is better)
Translates to: WAVQFSSSFRSI*TMLLKVSGPMI
Trigger: GATCATAGGGCCTGAGACTTTGAGTAACATGGTTCATATTGACCTGAATGAAGAAGAGAACTGTACTGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CCA 72 bp ACTGAAGCTCATCCATTGTGTCAACATATTTCTCTTTaGGTCCCTCAACAAAGGAAGGGGTCATATCTTCCA +
Preference number: 6 (lower is better)
Translates to: TEAHPLCQHISL*VPQQRKGSYLP
Trigger: TGGAAGATATGACCCCTTCCTTTGTTGAGGGACCCAAAGAGAAATATGTTGACACAATGGATGAGCTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp GTTGTGTGGAATTTAATTTCTACATCTTCATCCTCCTaGGAGTCAGCCAGAACACGTGAGGACTTATCAAAG +
Preference number: 6 (lower is better)
Translates to: VVWNLISTSSSS*ESARTREDLSK
Trigger: CTTTGATAAGTCCTCACGTGTTCTGGCTGACTCCCAGGAGGATGAAGATGTAGAAATTAAATTCCACACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS TCA 72 bp CAGATGTTAGCTGACTTAGGACTACCACTAGGTACTTaGGAAGACTCTGAAATTTTGTTAGCCTTGCTGATG +
Preference number: 6 (lower is better)
Translates to: QMLADLGLPLGT*EDSEILLALLM
Trigger: CATCAGCAAGGCTAACAAAATTTCAGAGTCTTCTCAAGTACCTAGTGGTAGTCCTAAGTCAGCTAACATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp CAACAAAGGAAGGGGTCATATCTTCCATGGAGCATCTaGACAAATCTCCAACTGTGTTTACATTACAGTTCA +
Preference number: 6 (lower is better)
Translates to: QQRKGSYLPWSI*TNLQLCLHYSS
Trigger: TGAACTGTAATGTAAACACAGTTGGAGATTTGTCCAGATGCTCCATGGAAGATATGACCCCTTCCTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 72 bp CCAGACAGTGAAAGGCAACTGCTGTCCTTAATTGAATaGCTGCAATCACTTTGTAGCTTTGTCACCTTACAT +
Preference number: 6 (lower is better)
Translates to: PDSERQLLSLIE*LQSLCSFVTLH
Trigger: ATGTAAGGTGACAAAGCTACAAAGTGATTGCAGCAATTCAATTAAGGACAGCAGTTGCCTTTCACTGTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207708.2
CDS CAA 90 bp CCTTCTTCCCAACCAAAGAGTTTCAGTGCACTTGTAAGCAAAGTTTaGTCAGATTCTTTGGAAAACTGGTCTTGCAGAAGTTCACAATTC +
Preference number: 6 (lower is better)
Translates to: PSSQPKSFSALVSKV*SDSLENWSCRSSQF
Trigger: GAATTGTGAACTTCTGCAAGACCAGTTTTCCAAAGAATCTGACAAAACTTTGCTTACAAGTGCACTGAAACTCTTTGGTTGGGAAGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp TGGTGGGAACTGTCACTTTTCAAGTTGAATTCCTGTTaGCTAGGCATGTTTTCTAGAGAAGCAAACTTGCTT +
Preference number: 6 (lower is better)
Translates to: WWELSLFKLNSC*LGMFSREANLL
Trigger: AAGCAAGTTTGCTTCTCTAGAAAACATGCCTAGTCAACAGGAATTCAACTTGAAAAGTGACAGTTCCCACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp ATCTCTCTCTGTATAACTGTGCCTCCATTTAAGGTATaGTTGCTCATAGTTCCAGGCTTGTTTCTAAGATCC +
Preference number: 6 (lower is better)
Translates to: ISLCITVPPFKV*LLIVPGLFLRS
Trigger: GGATCTTAGAAACAAGCCTGGAACTATGAGCAATCATACCTTAAATGGAGGCACAGTTATACAGAGAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp AATTCTTGCTTTATACTGTCAGTAAACTCTGGTTGCTaGACACTGTATACCATCTGCCTCTCCAAATCCTCA +
Preference number: 6 (lower is better)
Translates to: NSCFILSVNSGC*TLYTICLSKSS
Trigger: TGAGGATTTGGAGAGGCAGATGGTATACAGTGTTCAGCAACCAGAGTTTACTGACAGTATAAAGCAAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp TATGTAGAGAGGTCTATCCTCAGTGAGTTGTGTAGCTaGTCCAGCAGTTTTACAAATCTTTCTTTACCAAAG +
Preference number: 6 (lower is better)
Translates to: YVERSILSELCS*SSSFTNLSLPK
Trigger: CTTTGGTAAAGAAAGATTTGTAAAACTGCTGGACCAGCTACACAACTCACTGAGGATAGACCTCTCTACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000079978.13
ENSMUST00000107952.9
ENSMUST00000107953.9
ENSMUST00000163653.8
ENSMUST00000207569.2
ENSMUST00000207708.2
CDS CCA 72 bp TCCTCCTATCTATTGTGTTATATTTTTGAGGATATCTaGAAAGTGCAGGTGCTTCACACTTATGGCCATGCT +
Preference number: 6 (lower is better)
Translates to: SSYLLCYIFEDI*KVQVLHTYGHA
Trigger: AGCATGGCCATAAGTGTGAAGCACCTGCACTTTCCAGATATCCTCAAAAATATAACACAATAGATAGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 72 bp AGAGAATTCTTGCTTTATACTGTCAGTAAACTCTGGTaGCTGAACACTGTATACCATCTGCCTCTCCAAATC +
Preference number: 6 (lower is better)
Translates to: REFLLYTVSKLW*LNTVYHLPLQI
Trigger: GATTTGGAGAGGCAGATGGTATACAGTGTTCAGCAACCAGAGTTTACTGACAGTATAAAGCAAGAATTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp TTCAGCTTGCTGAAAACAGACTTCACAATTGAACTCTaGGTTTGTGGAGCAGAGTCCTTTCTAATAGTTTCT +
Preference number: 6 (lower is better)
Translates to: FSLLKTDFTIEL*VCGAESFLIVS
Trigger: AGAAACTATTAGAAAGGACTCTGCTCCACAAACTCAGAGTTCAATTGTGAAGTCTGTTTTCAGCAAGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp GCAATTTTGTTGGACCTCTTTATCAGTGGTTGCTACTaGGCTGTGAAAACTCTGATTATTAACAGTGCTATG +
Preference number: 6 (lower is better)
Translates to: AILLDLFISGCY*AVKTLIINSAM
Trigger: CATAGCACTGTTAATAATCAGAGTTTTCACAGCTCAGTAGCAACCACTGATAAAGAGGTCCAACAAAATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp ACTGGTCGAATGATTCATATGGTAAGTCACATGAAATaGCGCTGTTTGGATTTGTGCCCCACTCAAATATAT +
Preference number: 6 (lower is better)
Translates to: TGRMIHMVSHMK*RCLDLCPTQIY
Trigger: ATATATTTGAGTGGGGCACAAATCCAAACAGCGTCATTTCATGTGACTTACCATATGAATCATTCGACCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp ATCTATTGTGTTATATTTTTGAGGATATCTGGAAAGTaGAGGTGCTTCACACTTATGGCCATGCTTGCTCTT +
Preference number: 6 (lower is better)
Translates to: IYCVIFLRISGK*RCFTLMAMLAL
Trigger: AAGAGCAAGCATGGCCATAAGTGTGAAGCACCTGCACTTTCCAGATATCCTCAAAAATATAACACAATAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 72 bp CAACCAAAGAGTTTCAGTGCACTTGTAAGCAAAGTTTaGTCAGATTCTTTGGAAAACTGGTCTTGCAGAAGT +
Preference number: 6 (lower is better)
Translates to: QPKSFSALVSKV*SDSLENWSCRS
Trigger: ACTTCTGCAAGACCAGTTTTCCAAAGAATCTGACAAAACTTTGCTTACAAGTGCACTGAAACTCTTTGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 90 bp GTGGTAAATCTTTCATTTTGGTGTTCAGTACAAACATCTAGATCATaGAGCTTCTCATTCAAACCATTGTCACGAGAAAGAGACTCAGCT +
Preference number: 6 (lower is better)
Translates to: VVNLSFWCSVQTSRS*SFSFKPLSRERDSA
Trigger: AGCTGAGTCTCTTTCTCGTGACAATGGTTTGAATGAGAAGCTCAATGATCTAGATGTTTGTACTGAACACCAAAATGAAAGATTTACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 90 bp AAAGTCTTCGGCTGTTCAATTAAGGACCCAGAAAAGGATTTTACTTaGGTCACAAACCCTGAAATCATTTCTACTTTGGAGCCTAATACT +
Preference number: 6 (lower is better)
Translates to: KVFGCSIKDPEKDFT*VTNPEIISTLEPNT
Trigger: AGTATTAGGCTCCAAAGTAGAAATGATTTCAGGGTTTGTGACCAAAGTAAAATCCTTTTCTGGGTCCTTAATTGAACAGCCGAAGACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp GGCTTATCCCTTTGGTCAAAACTTGACTCAAATACTTaGGAAAAGGTCTCTAGATTTACATACAATGACCTC +
Preference number: 6 (lower is better)
Translates to: GLSLWSKLDSNT*EKVSRFTYNDL
Trigger: GAGGTCATTGTATGTAAATCTAGAGACCTTTTCTCAAGTATTTGAGTCAAGTTTTGACCAAAGGGATAAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp AAAGAAAATATATTCCTTCTGGATGGCAATTCTTGCTaGGATGCAGGTGTAGCAGTTGAAAATTTCCATTCT +
Preference number: 6 (lower is better)
Translates to: KENIFLLDGNSC*DAGVAVENFHS
Trigger: AGAATGGAAATTTTCAACTGCTACACCTGCATCCCAGCAAGAATTGCCATCCAGAAGGAATATATTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 90 bp CCAAAGAGTTTCAGTGCACTTGTAAGCAAAGTTTTGTCAGATTCTTaGGAAAACTGGTCTTGCAGAAGTTCACAATTCTTATGTTCATCT +
Preference number: 6 (lower is better)
Translates to: PKSFSALVSKVLSDS*ENWSCRSSQFLCSS
Trigger: AGATGAACATAAGAATTGTGAACTTCTGCAAGACCAGTTTTCCAAAGAATCTGACAAAACTTTGCTTACAAGTGCACTGAAACTCTTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 90 bp GAAAAGGATTTTACTTTGGTCACAAACCCTGAAATCATTTCTACTTaGGAGCCTAATACTGATCTGTCTTCTAATTTATCTGCATCTTGG +
Preference number: 6 (lower is better)
Translates to: EKDFTLVTNPEIIST*EPNTDLSSNLSASW
Trigger: CCAAGATGCAGATAAATTAGAAGACAGATCAGTATTAGGCTCCAAAGTAGAAATGATTTCAGGGTTTGTGACCAAAGTAAAATCCTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp GCATACCATAATAAATTATCTTCCTTGCCAAGAACTTaGAGACTATGGGCAGAAATAGTGTTGTCATCTAAC +
Preference number: 6 (lower is better)
Translates to: AYHNKLSSLPRT*RLWAEIVLSSN
Trigger: GTTAGATGACAACACTATTTCTGCCCATAGTCTTCAAGTTCTTGGCAAGGAAGATAATTTATTATGGTATGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS TCA 72 bp TTTCATTTTGGTGTTCAGTACAAACATCTAGATCATTaGGCTTCTCATTCAAACCATTGTCACGAGAAAGAG +
Preference number: 6 (lower is better)
Translates to: FHFGVQYKHLDH*ASHSNHCHEKE
Trigger: CTCTTTCTCGTGACAATGGTTTGAATGAGAAGCTCAATGATCTAGATGTTTGTACTGAACACCAAAATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp TCAGTCACTAAAGAAACAGACTTATTTTCAGTTGTCTaGATGAGACACACATTGGTTTTAAAGAAATCGCCA +
Preference number: 6 (lower is better)
Translates to: SVTKETDLFSVV*MRHTLVLKKSP
Trigger: TGGCGATTTCTTTAAAACCAATGTGTGTCTCATGCAGACAACTGAAAATAAGTCTGTTTCTTTAGTGACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp TTTCCCTTCTCGATACCTTGCTATGATCTTCACTTTTaGTTTCCTCTTTCTCGGAAAATATCTTTAATGGAT +
Preference number: 6 (lower is better)
Translates to: FPFSIPCYDLHF*FPLSRKISLMD
Trigger: ATCCATTAAAGATATTTTCCGAGAAAGAGGAAACCAAAAGTGAAGATCATAGCAAGGTATCGAGAAGGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp GCTTACTCAAGATTAATGAGTGAAGACTATCATGTATaGGTTCAGATAACTCTGATTGCTGATCTGTTTTCT +
Preference number: 6 (lower is better)
Translates to: AYSRLMSEDYHV*VQITLIADLFS
Trigger: AGAAAACAGATCAGCAATCAGAGTTATCTGAACCCATACATGATAGTCTTCACTCATTAATCTTGAGTAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CCA 72 bp AAGTTCACAATTCTTATGTTCATCTTTACTAAGCTGTaGTGCAAGAGGATCTACAATGGACTTTGCTGTAAT +
Preference number: 6 (lower is better)
Translates to: KFTILMFIFTKL*CKRIYNGLCCN
Trigger: ATTACAGCAAAGTCCATTGTAGATCCTCTTGCACCACAGCTTAGTAAAGATGAACATAAGAATTGTGAACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 72 bp TTCAGTGCACTTGTAAGCAAAGTTTTGTCAGATTCTTaGGAAAACTGGTCTTGCAGAAGTTCACAATTCTTA +
Preference number: 6 (lower is better)
Translates to: FSALVSKVLSDS*ENWSCRSSQFL
Trigger: TAAGAATTGTGAACTTCTGCAAGACCAGTTTTCCAAAGAATCTGACAAAACTTTGCTTACAAGTGCACTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS CAA 72 bp CTTTCATTTTGGTGTTCAGTACAAACATCTAGATCATaGAGCTTCTCATTCAAACCATTGTCACGAGAAAGA +
Preference number: 6 (lower is better)
Translates to: LSFWCSVQTSRS*SFSFKPLSRER
Trigger: TCTTTCTCGTGACAATGGTTTGAATGAGAAGCTCAATGATCTAGATGTTTGTACTGAACACCAAAATGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2
CDS GCA 72 bp TTCACAATTCTTATGTTCATCTTTACTAAGCTGTGGTaGAAGAGGATCTACAATGGACTTTGCTGTAATAAT +
Preference number: 6 (lower is better)
Translates to: FTILMFIFTKLW*KRIYNGLCCNN
Trigger: ATTATTACAGCAAAGTCCATTGTAGATCCTCTTGCACCACAGCTTAGTAAAGATGAACATAAGAATTGTGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207569.2