Pregenerated sensors for UNC119B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046562Ensembl transcript IDs: ENSMUST00000060798.6
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GCCCTTCTCCAGCCAGTAGTGTGGGCTCTCCAAGCAAAGCCAGCATaGCAGGCAGGAGACAGCGTGCCAGAAAACAGGAGCGTCCCAGGC | + |
Preference number: 1 (lower is better) Translates to: ALLQPVVWALQAKPA*QAGDSVPENRSVPG Trigger: GCCTGGGACGCTCCTGTTTTCTGGCACGCTGTCTCCTGCCTGTCATGCTGGCTTTGCTTGGAGAGCCCACACTACTGGCTGGAGAAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 90 bp | GAGGCGCACCTAAGGACTGCTCTGACAGGCAACCTCGGCCTATGCTaGCCTTCCCAAACACTCACACATGCAGCAGTCTGGGGCAGGACC | + |
Preference number: 1 (lower is better) Translates to: EAHLRTALTGNLGLC*PSQTLTHAAVWGRT Trigger: GGTCCTGCCCCAGACTGCTGCATGTGTGAGTGTTTGGGAAGGGCAGCATAGGCCGAGGTTGCCTGTCAGAGCAGTCCTTAGGTGCGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 90 bp | CCTGAGGCGCACCTAAGGACTGCTCTGACAGGCAACCTCGGCCTATaGTGCCCTTCCCAAACACTCACACATGCAGCAGTCTGGGGCAGG | + |
Preference number: 1 (lower is better) Translates to: PEAHLRTALTGNLGL*CPSQTLTHAAVWGR Trigger: CCTGCCCCAGACTGCTGCATGTGTGAGTGTTTGGGAAGGGCAGCATAGGCCGAGGTTGCCTGTCAGAGCAGTCCTTAGGTGCGCCTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 90 bp | ATAACTAGGTTTCCCAGTCCCGAAGCCTCCGGAGCACAGCATCACTaGACCATCAGGTGCTGGCCCGGTACAGGGCCTGGGTCCAAACCC | + |
Preference number: 1 (lower is better) Translates to: ITRFPSPEASGAQHH*TIRCWPGTGPGSKP Trigger: GGGTTTGGACCCAGGCCCTGTACCGGGCCAGCACCTGATGGTGCAGTGATGCTGTGCTCCGGAGGCTTCGGGACTGGGAAACCTAGTTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 90 bp | ACAGGCAGGAGACAGCGTGCCAGAAAACAGGAGCGTCCCAGGCTGTaGGCTACTGAGCTAAGGCCACGCAGCTCTCGGAAGCACACGCTA | + |
Preference number: 1 (lower is better) Translates to: TGRRQRARKQERPRL*ATELRPRSSRKHTL Trigger: TAGCGTGTGCTTCCGAGAGCTGCGTGGCCTTAGCTCAGTAGCTCACAGCCTGGGACGCTCCTGTTTTCTGGCACGCTGTCTCCTGCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 90 bp | GAGACAGCGTGCCAGAAAACAGGAGCGTCCCAGGCTGTGAGCTACTaGGCTAAGGCCACGCAGCTCTCGGAAGCACACGCTAGGCAGTAT | + |
Preference number: 1 (lower is better) Translates to: ETACQKTGASQAVSY*AKATQLSEAHARQY Trigger: ATACTGCCTAGCGTGTGCTTCCGAGAGCTGCGTGGCCTTAGCTCAGTAGCTCACAGCCTGGGACGCTCCTGTTTTCTGGCACGCTGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 90 bp | AGACTGCTCCATCCTACCAGGATGACTGAGCACCCGGCCTCAGTGTaGTCTGAGAACAGGCTGAAGGGAAAGGGGATGCAGCCCTTCTCC | + |
Preference number: 1 (lower is better) Translates to: RLLHPTRMTEHPASV*SENRLKGKGMQPFS Trigger: GGAGAAGGGCTGCATCCCCTTTCCCTTCAGCCTGTTCTCAGAGCACACTGAGGCCGGGTGCTCAGTCATCCTGGTAGGATGGAGCAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CCA 90 bp | TGCAGCCCAGCCCAGCACAAGCCTTCTGGCAGACAAAGCTGTGCCTaGACAGTCAGGCTTGTCGGGATAAGCAGTGCACAGCTAAGACTA | + |
Preference number: 1 (lower is better) Translates to: CSPAQHKPSGRQSCA*TVRLVGISSAQLRL Trigger: TAGTCTTAGCTGTGCACTGCTTATCCCGACAAGCCTGACTGTCCAGGCACAGCTTTGTCTGCCAGAAGGCTTGTGCTGGGCTGGGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CCA 90 bp | CTTAAGGCACCTAGAGTTGGAATGGACTCCAGTTCTGAGATCCACTaGAATGGTCAGGAGGTGCCCACCATAGGGCACCTGGGCCCCCAT | + |
Preference number: 1 (lower is better) Translates to: LKAPRVGMDSSSEIH*NGQEVPTIGHLGPH Trigger: ATGGGGGCCCAGGTGCCCTATGGTGGGCACCTCCTGACCATTCCAGTGGATCTCAGAACTGGAGTCCATTCCAACTCTAGGTGCCTTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CCA 90 bp | GCAGCACATGGGGCAGAGCCACACTTAAGGCACCTAGAGTTGGAATaGACTCCAGTTCTGAGATCCACTGGAATGGTCAGGAGGTGCCCA | + |
Preference number: 1 (lower is better) Translates to: AAHGAEPHLRHLELE*TPVLRSTGMVRRCP Trigger: TGGGCACCTCCTGACCATTCCAGTGGATCTCAGAACTGGAGTCCATTCCAACTCTAGGTGCCTTAAGTGTGGCTCTGCCCCATGTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CCA 90 bp | TTACGGTTCAGAAGGGCAGCTCATCCCCAAGACATGGGGCAAGGATaGAGATGGAGCAGAACTTTGCCTCATACCAGGAAGGGTTCAGCC | + |
Preference number: 1 (lower is better) Translates to: LRFRRAAHPQDMGQG*RWSRTLPHTRKGSA Trigger: GGCTGAACCCTTCCTGGTATGAGGCAAAGTTCTGCTCCATCTCCATCCTTGCCCCATGTCTTGGGGATGAGCTGCCCTTCTGAACCGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 90 bp | TCTGAGGCTTGTCAAGAGCATGGAAAGCTCACCAGAGGAGCCACGTaGGGAAAGGCAGAGAGACACTCATGTCTGTATGCAGGTGAGGGA | + |
Preference number: 1 (lower is better) Translates to: SEACQEHGKLTRGAT*GKAERHSCLYAGEG Trigger: TCCCTCACCTGCATACAGACATGAGTGTCTCTCTGCCTTTCCTCACGTGGCTCCTCTGGTGAGCTTTCCATGCTCTTGACAAGCCTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 90 bp | TCTGGGGCCCTGGTCTCATTACAGGTGACATTACAGGTGACATGGTaGCTCAGAGACACTTCATGCACACCCACCCTTCCAGCACTTCAT | + |
Preference number: 1 (lower is better) Translates to: SGALVSLQVTLQVTW*LRDTSCTPTLPALH Trigger: ATGAAGTGCTGGAAGGGTGGGTGTGCATGAAGTGTCTCTGAGGCACCATGTCACCTGTAATGTCACCTGTAATGAGACCAGGGCCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CCA 90 bp | TACTCTGGGGCCCTGGTCTCATTACAGGTGACATTACAGGTGACATaGTGCCTCAGAGACACTTCATGCACACCCACCCTTCCAGCACTT | + |
Preference number: 1 (lower is better) Translates to: YSGALVSLQVTLQVT*CLRDTSCTPTLPAL Trigger: AAGTGCTGGAAGGGTGGGTGTGCATGAAGTGTCTCTGAGGCACCATGTCACCTGTAATGTCACCTGTAATGAGACCAGGGCCCCAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 90 bp | CGAACAAGAATGCGCCCACCTCGTCCAGACTCCCTGTGGCTATGGTaGTCTGGACATGGAATGTGGATGTTTTCAGAATCTGAGTCTATG | + |
Preference number: 1 (lower is better) Translates to: RTRMRPPRPDSLWLW*SGHGMWMFSESESM Trigger: CATAGACTCAGATTCTGAAAACATCCACATTCCATGTCCAGAGCACCATAGCCACAGGGAGTCTGGACGAGGTGGGCGCATTCTTGTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CCA 90 bp | TATTCCTGTATTTACGGTTCAGAAGGGCAGCTCATCCCCAAGACATaGGGCAAGGATGGAGATGGAGCAGAACTTTGCCTCATACCAGGA | + |
Preference number: 1 (lower is better) Translates to: YSCIYGSEGQLIPKT*GKDGDGAELCLIPG Trigger: TCCTGGTATGAGGCAAAGTTCTGCTCCATCTCCATCCTTGCCCCATGTCTTGGGGATGAGCTGCCCTTCTGAACCGTAAATACAGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 90 bp | TTACAGGTGACATTACAGGTGACATGGTGCCTCAGAGACACTTCATaGACACCCACCCTTCCAGCACTTCATTCAGTGACAAATGAACCC | + |
Preference number: 1 (lower is better) Translates to: LQVTLQVTWCLRDTS*TPTLPALHSVTNEP Trigger: GGGTTCATTTGTCACTGAATGAAGTGCTGGAAGGGTGGGTGTGCATGAAGTGTCTCTGAGGCACCATGTCACCTGTAATGTCACCTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 90 bp | CCCGGGAAGCTTACCCTAATCTTTTACTTCACTATAATACCTCTGTaGACTAGGGGGCAGGGAACAAACACTGGGAAGAGAAACTGCTGG | + |
Preference number: 1 (lower is better) Translates to: PGKLTLIFYFTIIPL*TRGQGTNTGKRNCW Trigger: CCAGCAGTTTCTCTTCCCAGTGTTTGTTCCCTGCCCCCTAGTTCACAGAGGTATTATAGTGAAGTAAAAGATTAGGGTAAGCTTCCCGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 90 bp | GCATCCTGGGCTCTAAATACTGACGTAAAAATCCCCGAAGAAGTCTaGGAAGGAAGAGAGCAAAGCACAGGGTGCACACTAAACTCAAGA | + |
Preference number: 1 (lower is better) Translates to: ASWALNTDVKIPEEV*EGREQSTGCTLNSR Trigger: TCTTGAGTTTAGTGTGCACCCTGTGCTTTGCTCTCTTCCTTCTCAGACTTCTTCGGGGATTTTTACGTCAGTATTTAGAGCCCAGGATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 90 bp | CAGGAAGCCACTGTAGCCACTGGTGTTCCTGGACAGTTTGACTTCTaGCTCGGCTTCTGCTTGTTCAGTTATTTACAAAGTATGACTTCC | + |
Preference number: 1 (lower is better) Translates to: QEATVATGVPGQFDF*LGFCLFSYLQSMTS Trigger: GGAAGTCATACTTTGTAAATAACTGAACAAGCAGAAGCCGAGTCAGAAGTCAAACTGTCCAGGAACACCAGTGGCTACAGTGGCTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 90 bp | TTGACTTCTGACTCGGCTTCTGCTTGTTCAGTTATTTACAAAGTATaGCTTCCAGTTTACTCAAGTCAGGCACAAAAGTTGGAATTTCAA | + |
Preference number: 1 (lower is better) Translates to: LTSDSASACSVIYKV*LPVYSSQAQKLEFQ Trigger: TTGAAATTCCAACTTTTGTGCCTGACTTGAGTAAACTGGAAGTCATACTTTGTAAATAACTGAACAAGCAGAAGCCGAGTCAGAAGTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR TCA 90 bp | CTGCACCATCAGGTGCTGGCCCGGTACAGGGCCTGGGTCCAAACCCAGAACCACCAGTCAGTGGGGATCTaGGGACCCCTGAGGCGCACC | + |
Preference number: 2 (lower is better) Translates to: LHHQVLARYRAWVQTQNHQSVGI*GPLRRT Trigger: GGTGCGCCTCAGGGGTCCTCAGATCCCCACTGACTG...GTGGTTCTGGGTTTGGACCCAGGCCCTGTACCGGGCCAGCACCTGATGGTGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR TCA 90 bp | CAGGAGGTGCCCACCATAGGGCACCTGGGCCCCCATCTATCTCAGTGGGTAAACGGATCTGAGGACCCCTaGGGCGCACCTAAGGACTGC | + |
Preference number: 2 (lower is better) Translates to: QEVPTIGHLGPHLSQWVNGSEDP*GAPKDC Trigger: GCAGTCCTTAGGTGCGCCTCAGGGGTCCTCAGATCC...GTTTACCCACTGAGATAGATGGGGGCCCAGGTGCCCTATGGTGGGCACCTCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR CCA 90 bp | CTGCACCATCAGGTGCTGGCCCGGTACAGGGCCTGGGTCCAAACCCAGAACCACAGGGAGCCAGAGAGGTaGGAGTCAGTCAGTGGGGAT | + |
Preference number: 2 (lower is better) Translates to: LHHQVLARYRAWVQTQNHREPER*ESVSGD Trigger: ATCCCCACTGACTGACTCCCACCTCTCTGGCTCCCT...GTGGTTCTGGGTTTGGACCCAGGCCCTGTACCGGGCCAGCACCTGATGGTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR TCA 90 bp | CCCGGGCTCTGCCTACCCCAGTCCCTCTTCAAGTTTCTTCCAGTTGGCCTAACTGGGACGGGGGAGAAGTaGGCTGCTCTCAGCTGCCCA | + |
Preference number: 2 (lower is better) Translates to: PGLCLPQSLFKFLPVGLTGTGEK*AALSCP Trigger: TGGGCAGCTGAGAGCAGCTCACTTCTCCCCCGTCCC...AGTTAGGCCAACTGGAAGAAACTTGAAGAGGGACTGGGGTAGGCAGAGCCCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR GCA 90 bp | AGATGCCCAGGGCCAGGAGAAGCTTCAGGAGGCTCATATGAGCCAGCGTTGGGCAAGCACCCAGGAACCTaGAGGGGCTGGGAACCTGCA | + |
Preference number: 2 (lower is better) Translates to: RCPGPGEASGGSYEPALGKHPGT*RGWEPA Trigger: TGCAGGTTCCCAGCCCCTGCAGGTTCCTGGGTGCTT...GCCCAACGCTGGCTCATATGAGCCTCCTGAAGCTTCTCCTGGCCCTGGGCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR GCA 90 bp | AGATGCCCAGGGCCAGGAGAAGCTTCAGGAGGCTCATATGAGCCAGCGTTGGGCGGAGCACAGCATCACTaGACCATCAGGTGCTGGCCC | + |
Preference number: 2 (lower is better) Translates to: RCPGPGEASGGSYEPALGGAQHH*TIRCWP Trigger: GGGCCAGCACCTGATGGTGCAGTGATGCTGTGCTCC...GCCCAACGCTGGCTCATATGAGCCTCCTGAAGCTTCTCCTGGCCCTGGGCATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR GCA 90 bp | CACACTAAACTCAAGAGACACCGTTCTGTGAACAGAACTGCCCAGGGCCACGGCCAGGGGCTGGGAACCTaGAGCCCAGCCCAGCACAAG | + |
Preference number: 2 (lower is better) Translates to: HTKLKRHRSVNRTAQGHGQGLGT*SPAQHK Trigger: CTTGTGCTGGGCTGGGCTGCAGGTTCCCAGCCCCTG...GCCGTGGCCCTGGGCAGTTCTGTTCACAGAACGGTGTCTCTTGAGTTTAGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR CCA 90 bp | CAGGAGGTGCCCACCATAGGGCACCTGGGCCCCCATCTATCTCAGTGGGTAAACGGGAAGAGAAACTGCTaGCTGGCACCTCCTTGGAGC | + |
Preference number: 2 (lower is better) Translates to: QEVPTIGHLGPHLSQWVNGKRNC*LAPPWS Trigger: GCTCCAAGGAGGTGCCAGCCAGCAGTTTCTCTTCCC...GTTTACCCACTGAGATAGATGGGGGCCCAGGTGCCCTATGGTGGGCACCTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR CCA 90 bp | TGGTCAGGAGGTGCCCACCATAGGGCACCTGGGCCCCCATCTATCTCAGTGGGTAGACAAAGCTGTGCCTaGACAGTCAGGCTTGTCGGG | + |
Preference number: 2 (lower is better) Translates to: WSGGAHHRAPGPPSISVGRQSCA*TVRLVG Trigger: CCCGACAAGCCTGACTGTCCAGGCACAGCTTTGTCT...ACCCACTGAGATAGATGGGGGCCCAGGTGCCCTATGGTGGGCACCTCCTGACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR CCA 90 bp | GTATTTACGGTTCAGAAGGGCAGCTCATCCCCAAGACATGGGGCAAGGATGGAGGGAACCTGCAGGGGCTaGGAACCTGCAGCCCAGCCC | + |
Preference number: 2 (lower is better) Translates to: VFTVQKGSSSPRHGARMEGTCRG*EPAAQP Trigger: GGGCTGGGCTGCAGGTTCCCAGCCCCTGCAGGTTCC...CTCCATCCTTGCCCCATGTCTTGGGGATGAGCTGCCCTTCTGAACCGTAAATAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR GCA 90 bp | TGGTCAGGAGGTGCCCACCATAGGGCACCTGGGCCCCCATCTATCTCAGTGGGTTTACAGGTGACATGGTaGCTCAGAGACACTTCATGC | + |
Preference number: 2 (lower is better) Translates to: WSGGAHHRAPGPPSISVGLQVTW*LRDTSC Trigger: GCATGAAGTGTCTCTGAGGCACCATGTCACCTGTAA...ACCCACTGAGATAGATGGGGGCCCAGGTGCCCTATGGTGGGCACCTCCTGACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CAA 90 bp | CTCCCAGCAGCACATGGGGCAGAGCCACACTTAAGGCACCTAGAGTaGGAATGGACTCCAGTTCTGAGATCCACTGGAATGGTCAGGAGG | + |
Preference number: 2 (lower is better) Translates to: LPAAHGAEPHLRHLE*EWTPVLRSTGMVRR Trigger: CCTCCTGACCATTCCAGTGGATCTCAGAACTGGAGTCCATTCCAACTCTAGGTGCCTTAAGTGTGGCTCTGCCCCATGTGCTGCTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR TCA 90 bp | CCCACCCTTCCAGCACTTCATTCAGTGACAAATGAACCCCAGCCACAGTGTCCTACTGTGCCTCTCCCATaGGCCACATTAGCCTGGGAG | + |
Preference number: 2 (lower is better) Translates to: PTLPALHSVTNEPQPQCPTVPLP*ATLAWE Trigger: CTCCCAGGCTAATGTGGCTCATGGGAGAGGCACAGT...AGGACACTGTGGCTGGGGTTCATTTGTCACTGAATGAAGTGCTGGAAGGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR GCA 90 bp | GCAGTCAGACACGGACCGCTGGCCCTTCAGAAGCTAAAGACTGCTCCATCCTACCTAAAGCCCCAACTGTaGCTCTCCCATGAGCCACAT | + |
Preference number: 2 (lower is better) Translates to: AVRHGPLALQKLKTAPSYLKPQL*LSHEPH Trigger: ATGTGGCTCATGGGAGAGGCACAGTTGGGGCTTTAG...GTAGGATGGAGCAGTCTTTAGCTTCTGAAGGGCCAGCGGTCCGTGTCTGACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR GCA 90 bp | ACCTCGTCCAGACTCCCTGTGGCTATGGTGCTCTGGACATGGAATGTGGATGTTAGGCAGGAGACAGCGTaGCAGAAAACAGGAGCGTCC | + |
Preference number: 2 (lower is better) Translates to: TSSRLPVAMVLWTWNVDVRQETA*QKTGAS Trigger: GGACGCTCCTGTTTTCTGGCACGCTGTCTCCTGCCT...AACATCCACATTCCATGTCCAGAGCACCATAGCCACAGGGAGTCTGGACGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR CCA 90 bp | CCTATGCTGCCCTTCCCAAACACTCACACATGCAGCAGTCTGGGGCAGGACCATAGAGAAACTGCTGGCTaGCACCTCCTTGGAGCACAA | + |
Preference number: 2 (lower is better) Translates to: PMLPFPNTHTCSSLGQDHRETAG*HLLGAQ Trigger: TTGTGCTCCAAGGAGGTGCCAGCCAGCAGTTTCTCT...ATGGTCCTGCCCCAGACTGCTGCATGTGTGAGTGTTTGGGAAGGGCAGCATAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR CCA 90 bp | GACTCCCTGTGGCTATGGTGCTCTGGACATGGAATGTGGATGTTTTCAGAATCTCACCTCCCAACCCAGTaGCTTAGCCCGGGCTCTGCC | + |
Preference number: 2 (lower is better) Translates to: DSLWLWCSGHGMWMFSESHLPTQ*LSPGSA Trigger: GGCAGAGCCCGGGCTAAGCCACTGGGTTGGGAGGTG...AGATTCTGAAAACATCCACATTCCATGTCCAGAGCACCATAGCCACAGGGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR GCA 90 bp | CCCACCCTTCCAGCACTTCATTCAGTGACAAATGAACCCCAGCCACAGTGTCCTCCAAACACTCACACATaGAGCAGTCTGGGGCAGGAC | + |
Preference number: 2 (lower is better) Translates to: PTLPALHSVTNEPQPQCPPNTHT*SSLGQD Trigger: GTCCTGCCCCAGACTGCTGCATGTGTGAGTGTTTGG...AGGACACTGTGGCTGGGGTTCATTTGTCACTGAATGAAGTGCTGGAAGGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR CCA 90 bp | CCCGGGCTCTGCCTACCCCAGTCCCTCTTCAAGTTTCTTCCAGTTGGCCTAACTGCAGGGAACAAACACTaGGAAGAGAAACTGCTGGCT | + |
Preference number: 2 (lower is better) Translates to: PGLCLPQSLFKFLPVGLTAGNKH*EEKLLA Trigger: AGCCAGCAGTTTCTCTTCCCAGTGTTTGTTCCCTGC...AGTTAGGCCAACTGGAAGAAACTTGAAGAGGGACTGGGGTAGGCAGAGCCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR CCA 90 bp | CCTATGCTGCCCTTCCCAAACACTCACACATGCAGCAGTCTGGGGCAGGACCATCTCTTCCAGGGTCACTaGAAACAGAGTCAGCTCTCT | + |
Preference number: 2 (lower is better) Translates to: PMLPFPNTHTCSSLGQDHLFQGH*KQSQLS Trigger: AGAGAGCTGACTCTGTTTCCAGTGACCCTGGAAGAG...ATGGTCCTGCCCCAGACTGCTGCATGTGTGAGTGTTTGGGAAGGGCAGCATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR GCA 90 bp | GCACATCCTTTCTCTCAAGTACTCTGGGGCCCTGGTCTCATTACAGGTGACATTGGGGGAGAAGTGAGCTaGTCTCAGCTGCCCAAAGCA | + |
Preference number: 2 (lower is better) Translates to: AHPFSQVLWGPGLITGDIGGEVS*SQLPKA Trigger: TGCTTTGGGCAGCTGAGAGCAGCTCACTTCTCCCCC...AATGTCACCTGTAATGAGACCAGGGCCCCAGAGTACTTGAGAGAAAGGATGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR CCA 90 bp | GACTCCCTGTGGCTATGGTGCTCTGGACATGGAATGTGGATGTTTTCAGAATCTCCAGCTGCAGCTTCCTaGACCAGGTTCGAGGTGGGT | + |
Preference number: 2 (lower is better) Translates to: DSLWLWCSGHGMWMFSESPAAAS*TRFEVG Trigger: ACCCACCTCGAACCTGGTCCAGGAAGCTGCAGCTGG...AGATTCTGAAAACATCCACATTCCATGTCCAGAGCACCATAGCCACAGGGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR TCA 90 bp | GACATGGTGCCTCAGAGACACTTCATGCACACCCACCCTTCCAGCACTTCATTCATCCCCGAAGAAGTCTaGGAAGGAAGAGAGCAAAGC | + |
Preference number: 2 (lower is better) Translates to: DMVPQRHFMHTHPSSTSFIPEEV*EGREQS Trigger: GCTTTGCTCTCTTCCTTCTCAGACTTCTTCGGGGAT...GAATGAAGTGCTGGAAGGGTGGGTGTGCATGAAGTGTCTCTGAGGCACCATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR GCA 90 bp | AGGCACCTAGAGTTGGAATGGACTCCAGTTCTGAGATCCACTGGAATGGTCAGGAGCAAGAACAGAAGATaGCACCAGGCTGAGACCGTG | + |
Preference number: 2 (lower is better) Translates to: RHLELEWTPVLRSTGMVRSKNRR*HQAETV Trigger: CACGGTCTCAGCCTGGTGGCATCTTCTGTTCTTGCT...CCTGACCATTCCAGTGGATCTCAGAACTGGAGTCCATTCCAACTCTAGGTGCCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR CCA 90 bp | GACTCCCTGTGGCTATGGTGCTCTGGACATGGAATGTGGATGTTTTCAGAATCTGCTCCCAGCAGCACATaGGGCAGAGCCACACTTAAG | + |
Preference number: 2 (lower is better) Translates to: DSLWLWCSGHGMWMFSESAPSST*GRATLK Trigger: CTTAAGTGTGGCTCTGCCCCATGTGCTGCTGGGAGC...AGATTCTGAAAACATCCACATTCCATGTCCAGAGCACCATAGCCACAGGGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR GCA 90 bp | CCCACCCTTCCAGCACTTCATTCAGTGACAAATGAACCCCAGCCACAGTGTCCTGAGCAAAGCACAGGGTaGACACTAAACTCAAGAGAC | + |
Preference number: 2 (lower is better) Translates to: PTLPALHSVTNEPQPQCPEQSTG*TLNSRD Trigger: GTCTCTTGAGTTTAGTGTGCACCCTGTGCTTTGCTC...AGGACACTGTGGCTGGGGTTCATTTGTCACTGAATGAAGTGCTGGAAGGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR-3UTR CCA 90 bp | CCTATGCTGCCCTTCCCAAACACTCACACATGCAGCAGTCTGGGGCAGGACCATGATCTATCAGCATCCTaGGCTCTAAATACTGACGTA | + |
Preference number: 2 (lower is better) Translates to: PMLPFPNTHTCSSLGQDHDLSAS*ALNTDV Trigger: TACGTCAGTATTTAGAGCCCAGGATGCTGATAGATC...ATGGTCCTGCCCCAGACTGCTGCATGTGTGAGTGTTTGGGAAGGGCAGCATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CCA 72 bp | CGGGCGACAGCTGCAATTCCTGCTCGGTGCTCGTGGTaGCGGCAGAGGACCTCCCTGTCCACTCCCGCAGCA | + |
Preference number: 3 (lower is better) Translates to: RATAAIPARCSW*RQRTSLSTPAA Trigger: TGCTGCGGGAGTGGACAGGGAGGTCCTCTGCCGCCACCACGAGCACCGAGCAGGAATTGCAGCTGTCGCCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 72 bp | TTTCCCAGTCCCGAAGCCTCCGGAGCACAGCATCACTaGACCATCAGGTGCTGGCCCGGTACAGGGCCTGGG | + |
Preference number: 3 (lower is better) Translates to: FPSPEASGAQHH*TIRCWPGTGPG Trigger: CCCAGGCCCTGTACCGGGCCAGCACCTGATGGTGCAGTGATGCTGTGCTCCGGAGGCTTCGGGACTGGGAAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CCA 72 bp | GCCTCCGGAGCACAGCATCACTGCACCATCAGGTGCTaGCCCGGTACAGGGCCTGGGTCCAAACCCAGAACC | + |
Preference number: 3 (lower is better) Translates to: ASGAQHHCTIRC*PGTGPGSKPRT Trigger: GGTTCTGGGTTTGGACCCAGGCCCTGTACCGGGCCAGCACCTGATGGTGCAGTGATGCTGTGCTCCGGAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 72 bp | GAAGCCTCCGGAGCACAGCATCACTGCACCATCAGGTaGTGGCCCGGTACAGGGCCTGGGTCCAAACCCAGA | + |
Preference number: 3 (lower is better) Translates to: EASGAQHHCTIR*WPGTGPGSKPR Trigger: TCTGGGTTTGGACCCAGGCCCTGTACCGGGCCAGCACCTGATGGTGCAGTGATGCTGTGCTCCGGAGGCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 72 bp | GAGGTGGGAGTCAGTCAGTGGGGATCTGAGGACCCCTaGGGCGCACCTAAGGACTGCTCTGACAGGCAACCT | + |
Preference number: 3 (lower is better) Translates to: EVGVSQWGSEDP*GAPKDCSDRQP Trigger: AGGTTGCCTGTCAGAGCAGTCCTTAGGTGCGCCTCAGGGGTCCTCAGATCCCCACTGACTGACTCCCACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 72 bp | CTGAGCACCCGGCCTCAGTGTGCTCTGAGAACAGGCTaGAGGGAAAGGGGATGCAGCCCTTCTCCAGCCAGT | + |
Preference number: 3 (lower is better) Translates to: LSTRPQCALRTG*RERGCSPSPAS Trigger: ACTGGCTGGAGAAGGGCTGCATCCCCTTTCCCTTCAGCCTGTTCTCAGAGCACACTGAGGCCGGGTGCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 72 bp | TGCCAGAAAACAGGAGCGTCCCAGGCTGTGAGCTACTaGGCTAAGGCCACGCAGCTCTCGGAAGCACACGCT | + |
Preference number: 3 (lower is better) Translates to: CQKTGASQAVSY*AKATQLSEAHA Trigger: AGCGTGTGCTTCCGAGAGCTGCGTGGCCTTAGCTCAGTAGCTCACAGCCTGGGACGCTCCTGTTTTCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 72 bp | ATGGGCATGGGGCATGCATGCCCGACCCCCAAGCACTaGTTCCCTCTTCCACTGCATCACAGGAAGCCACTG | + |
Preference number: 3 (lower is better) Translates to: MGMGHACPTPKH*FPLPLHHRKPL Trigger: CAGTGGCTTCCTGTGATGCAGTGGAAGAGGGAATCAGTGCTTGGGGGTCGGGCATGCATGCCCCATGCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 72 bp | CCCAGCCCAGCACAAGCCTTCTGGCAGACAAAGCTGTaGCTGGACAGTCAGGCTTGTCGGGATAAGCAGTGC | + |
Preference number: 3 (lower is better) Translates to: PSPAQAFWQTKL*LDSQACRDKQC Trigger: GCACTGCTTATCCCGACAAGCCTGACTGTCCAGGCACAGCTTTGTCTGCCAGAAGGCTTGTGCTGGGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 72 bp | CAGCCAGTAGTGTGGGCTCTCCAAGCAAAGCCAGCATaGCAGGCAGGAGACAGCGTGCCAGAAAACAGGAGC | + |
Preference number: 3 (lower is better) Translates to: QPVVWALQAKPA*QAGDSVPENRS Trigger: GCTCCTGTTTTCTGGCACGCTGTCTCCTGCCTGTCATGCTGGCTTTGCTTGGAGAGCCCACACTACTGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 72 bp | CATCCTACCAGGATGACTGAGCACCCGGCCTCAGTGTaGTCTGAGAACAGGCTGAAGGGAAAGGGGATGCAG | + |
Preference number: 3 (lower is better) Translates to: HPTRMTEHPASV*SENRLKGKGMQ Trigger: CTGCATCCCCTTTCCCTTCAGCCTGTTCTCAGAGCACACTGAGGCCGGGTGCTCAGTCATCCTGGTAGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 72 bp | TCAGCTCTCTCTAAAGCCCCAACTGTGCCTCTCCCATaGGCCACATTAGCCTGGGAGCCGACCAGTCCTATC | + |
Preference number: 3 (lower is better) Translates to: SALSKAPTVPLP*ATLAWEPTSPI Trigger: GATAGGACTGGTCGGCTCCCAGGCTAATGTGGCTCATGGGAGAGGCACAGTTGGGGCTTTAGAGAGAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 72 bp | AGGAAAGGCAGAGAGACACTCATGTCTGTATGCAGGTaGGGGAGATTGGCCCCGCAGCTCCCAGCAGCACAT | + |
Preference number: 3 (lower is better) Translates to: RKGRETLMSVCR*GRLAPQLPAAH Trigger: ATGTGCTGCTGGGAGCTGCGGGGCCAATCTCCCTCACCTGCATACAGACATGAGTGTCTCTCTGCCTTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 72 bp | CCAGTCCCTCTTCAAGTTTCTTCCAGTTGGCCTAACTaGATAGGCGAGGACAGACTGTGCCAGTGGCACGGG | + |
Preference number: 3 (lower is better) Translates to: PVPLQVSSSWPN*IGEDRLCQWHG Trigger: CCCGTGCCACTGGCACAGTCTGTCCTCGCCTATGCAGTTAGGCCAACTGGAAGAAACTTGAAGAGGGACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 72 bp | CTAAGGACTGCTCTGACAGGCAACCTCGGCCTATGCTaGCCTTCCCAAACACTCACACATGCAGCAGTCTGG | + |
Preference number: 3 (lower is better) Translates to: LRTALTGNLGLC*PSQTLTHAAVW Trigger: CCAGACTGCTGCATGTGTGAGTGTTTGGGAAGGGCAGCATAGGCCGAGGTTGCCTGTCAGAGCAGTCCTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 72 bp | CACCTAAGGACTGCTCTGACAGGCAACCTCGGCCTATaGTGCCCTTCCCAAACACTCACACATGCAGCAGTC | + |
Preference number: 3 (lower is better) Translates to: HLRTALTGNLGL*CPSQTLTHAAV Trigger: GACTGCTGCATGTGTGAGTGTTTGGGAAGGGCAGCATAGGCCGAGGTTGCCTGTCAGAGCAGTCCTTAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CCA 72 bp | CTGCCTACCCCAGTCCCTCTTCAAGTTTCTTCCAGTTaGCCTAACTGCATAGGCGAGGACAGACTGTGCCAG | + |
Preference number: 3 (lower is better) Translates to: LPTPVPLQVSSS*PNCIGEDRLCQ Trigger: CTGGCACAGTCTGTCCTCGCCTATGCAGTTAGGCCAACTGGAAGAAACTTGAAGAGGGACTGGGGTAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 72 bp | CCTTCAGAAGCTAAAGACTGCTCCATCCTACCAGGATaGCTGAGCACCCGGCCTCAGTGTGCTCTGAGAACA | + |
Preference number: 3 (lower is better) Translates to: PSEAKDCSILPG*LSTRPQCALRT Trigger: TGTTCTCAGAGCACACTGAGGCCGGGTGCTCAGTCATCCTGGTAGGATGGAGCAGTCTTTAGCTTCTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CCA 72 bp | GGGGCAGAGCCACACTTAAGGCACCTAGAGTTGGAATaGACTCCAGTTCTGAGATCCACTGGAATGGTCAGG | + |
Preference number: 3 (lower is better) Translates to: GAEPHLRHLELE*TPVLRSTGMVR Trigger: CCTGACCATTCCAGTGGATCTCAGAACTGGAGTCCATTCCAACTCTAGGTGCCTTAAGTGTGGCTCTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CCA 72 bp | TCACCCCAGACACAGCAAAATGCTGTCCCTAGGAACTaGAAATCAGATGCCCAGGGCCAGGAGAAGCTTCAG | + |
Preference number: 3 (lower is better) Translates to: SPQTQQNAVPRN*KSDAQGQEKLQ Trigger: CTGAAGCTTCTCCTGGCCCTGGGCATCTGATTTCCAGTTCCTAGGGACAGCATTTTGCTGTGTCTGGGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 72 bp | CTTCATGCACACCCACCCTTCCAGCACTTCATTCAGTaGCAAATGAACCCCAGCCACAGTGTCCTAGAGCTG | + |
Preference number: 3 (lower is better) Translates to: LHAHPPFQHFIQ*QMNPSHSVLEL Trigger: CAGCTCTAGGACACTGTGGCTGGGGTTCATTTGTCACTGAATGAAGTGCTGGAAGGGTGGGTGTGCATGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 72 bp | ATGCGCCCACCTCGTCCAGACTCCCTGTGGCTATGGTaGTCTGGACATGGAATGTGGATGTTTTCAGAATCT | + |
Preference number: 3 (lower is better) Translates to: MRPPRPDSLWLW*SGHGMWMFSES Trigger: AGATTCTGAAAACATCCACATTCCATGTCCAGAGCACCATAGCCACAGGGAGTCTGGACGAGGTGGGCGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CCA 72 bp | AGAATGCGCCCACCTCGTCCAGACTCCCTGTGGCTATaGTGCTCTGGACATGGAATGTGGATGTTTTCAGAA | + |
Preference number: 3 (lower is better) Translates to: RMRPPRPDSLWL*CSGHGMWMFSE Trigger: TTCTGAAAACATCCACATTCCATGTCCAGAGCACCATAGCCACAGGGAGTCTGGACGAGGTGGGCGCATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CCA 72 bp | GACACGGCCAAAGCACATCCTTTCTCTCAAGTACTCTaGGGCCCTGGTCTCATTACAGGTGACATTACAGGT | + |
Preference number: 3 (lower is better) Translates to: DTAKAHPFSQVL*GPGLITGDITG Trigger: ACCTGTAATGTCACCTGTAATGAGACCAGGGCCCCAGAGTACTTGAGAGAAAGGATGTGCTTTGGCCGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CCA 72 bp | GACTCCCTGTGGCTATGGTGCTCTGGACATGGAATGTaGATGTTTTCAGAATCTGAGTCTATGGCTCACCCC | + |
Preference number: 3 (lower is better) Translates to: DSLWLWCSGHGM*MFSESESMAHP Trigger: GGGGTGAGCCATAGACTCAGATTCTGAAAACATCCACATTCCATGTCCAGAGCACCATAGCCACAGGGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR GCA 72 bp | ACATTACAGGTGACATGGTGCCTCAGAGACACTTCATaGACACCCACCCTTCCAGCACTTCATTCAGTGACA | + |
Preference number: 3 (lower is better) Translates to: TLQVTWCLRDTS*TPTLPALHSVT Trigger: TGTCACTGAATGAAGTGCTGGAAGGGTGGGTGTGCATGAAGTGTCTCTGAGGCACCATGTCACCTGTAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 72 bp | ACTGTAGCCACTGGTGTTCCTGGACAGTTTGACTTCTaGCTCGGCTTCTGCTTGTTCAGTTATTTACAAAGT | + |
Preference number: 3 (lower is better) Translates to: TVATGVPGQFDF*LGFCLFSYLQS Trigger: ACTTTGTAAATAACTGAACAAGCAGAAGCCGAGTCAGAAGTCAAACTGTCCAGGAACACCAGTGGCTACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR TCA 72 bp | CTTACCCTAATCTTTTACTTCACTATAATACCTCTGTaGACTAGGGGGCAGGGAACAAACACTGGGAAGAGA | + |
Preference number: 3 (lower is better) Translates to: LTLIFYFTIIPL*TRGQGTNTGKR Trigger: TCTCTTCCCAGTGTTTGTTCCCTGCCCCCTAGTTCACAGAGGTATTATAGTGAAGTAAAAGATTAGGGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS-3UTR TCA 90 bp | CTGCACCATCAGGTGCTGGCCCGGTACAGGGCCTGGGTCCAAACCCAGAACCACCCTGGCGTCGCGCCTTaGGCCGGTTCAGGACGCCGC | + |
Preference number: 4 (lower is better) Translates to: LHHQVLARYRAWVQTQNHPGVAP*AGSGRR Trigger: GCGGCGTCCTGAACCGGCTCAAGGCGCGACGCCAGG...GTGGTTCTGGGTTTGGACCCAGGCCCTGTACCGGGCCAGCACCTGATGGTGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS-3UTR GCA 90 bp | GCTGCCCTTCCCAAACACTCACACATGCAGCAGTCTGGGGCAGGACCATGTGACAGGGCCAGCAGCTCCTaGTCCGTGACGGCGGCCCCG | + |
Preference number: 4 (lower is better) Translates to: AALPKHSHMQQSGAGPCDRASSS*SVTAAP Trigger: CGGGGCCGCCGTCACGGAGCAGGAGCTGCTGGCCCT...GTCACATGGTCCTGCCCCAGACTGCTGCATGTGTGAGTGTTTGGGAAGGGCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS-3UTR TCA 90 bp | CACACTAAACTCAAGAGACACCGTTCTGTGAACAGAACTGCCCAGGGCCACGGCGCAGCTCCTGCTCCGTaGCGGCGGCCCCGGAGCCGT | + |
Preference number: 4 (lower is better) Translates to: HTKLKRHRSVNRTAQGHGAAPAP*RRPRSR Trigger: ACGGCTCCGGGGCCGCCGTCACGGAGCAGGAGCTGC...GCCGTGGCCCTGGGCAGTTCTGTTCACAGAACGGTGTCTCTTGAGTTTAGTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS-3UTR GCA 90 bp | CACACTAAACTCAAGAGACACCGTTCTGTGAACAGAACTGCCCAGGGCCACGGCTCTTCTTCTCCTCCTTaGCAGCCACCAGCCCGCCGG | + |
Preference number: 4 (lower is better) Translates to: HTKLKRHRSVNRTAQGHGSSSPP*QPPARR Trigger: CCGGCGGGCTGGTGGCTGGCAAGGAGGAGAAGAAGA...GCCGTGGCCCTGGGCAGTTCTGTTCACAGAACGGTGTCTCTTGAGTTTAGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS-3UTR CCA 90 bp | GGAACAAACACTGGGAAGAGAAACTGCTGGCTGGCACCTCCTTGGAGCACAAAACCGGAAACCTGTCACTaGCCTGTCACCCACAGTGAA | + |
Preference number: 4 (lower is better) Translates to: GTNTGKRNCWLAPPWSTKPETCH*PVTHSE Trigger: TTCACTGTGGGTGACAGGCCAGTGACAGGTTTCCGG...TTTTGTGCTCCAAGGAGGTGCCAGCCAGCAGTTTCTCTTCCCAGTGTTTGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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3UTR CAA 72 bp | GCACATGGGGCAGAGCCACACTTAAGGCACCTAGAGTaGGAATGGACTCCAGTTCTGAGATCCACTGGAATG | + |
Preference number: 4 (lower is better) Translates to: AHGAEPHLRHLE*EWTPVLRSTGM Trigger: CATTCCAGTGGATCTCAGAACTGGAGTCCATTCCAACTCTAGGTGCCTTAAGTGTGGCTCTGCCCCATGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS TCA 90 bp | CGGAGCCGTCGTCGGGCGTGTGTGGGGGCCCCTGGCGTCGCGCCTTaGGCCGGTTCAGGACGCCGCCGCCGGCCTTCTTCTTCTCCTCCT | + |
Preference number: 5 (lower is better) Translates to: RSRRRACVGAPGVAP*AGSGRRRRPSSSPP Trigger: AGGAGGAGAAGAAGAAGGCCGGCGGCGGCGTCCTGAACCGGCTCAAGGCGCGACGCCAGGGGCCCCCACACACGCCCGACGACGGCTCCG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS-3UTR CAA 90 bp | CTGCACCATCAGGTGCTGGCCCGGTACAGGGCCTGGGTCCAAACCCAGAACCACTTCTTCTTCTCCTCCTaGCCAGCCACCAGCCCGCCG | + |
Preference number: 5 (lower is better) Translates to: LHHQVLARYRAWVQTQNHFFFSS*PATSPP Trigger: CGGCGGGCTGGTGGCTGGCAAGGAGGAGAAGAAGAA...GTGGTTCTGGGTTTGGACCCAGGCCCTGTACCGGGCCAGCACCTGATGGTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS TCA 90 bp | GCCGCTCGATCATCCGGAAACCTGTCACTGGCCTGTCACCCACAGTaGACTCTACCGTGGCACCAACGGTCCGGAGGCGAAGAAACGCCG | + |
Preference number: 5 (lower is better) Translates to: AARSSGNLSLACHPQ*TLPWHQRSGGEETP Trigger: CGGCGTTTCTTCGCCTCCGGACCGTTGGTGCCACGGTAGAGTTCACTGTGGGTGACAGGCCAGTGACAGGTTTCCGGATGATCGAGCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS-3UTR CAA 90 bp | GCACATCCTTTCTCTCAAGTACTCTGGGGCCCTGGTCTCATTACAGGTGACATTCCCTGGCGTCGCGCCTaGAGCCGGTTCAGGACGCCG | + |
Preference number: 5 (lower is better) Translates to: AHPFSQVLWGPGLITGDIPWRRA*SRFRTP Trigger: CGGCGTCCTGAACCGGCTCAAGGCGCGACGCCAGGG...AATGTCACCTGTAATGAGACCAGGGCCCCAGAGTACTTGAGAGAAAGGATGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS TCA 90 bp | ACCGTGGCACCAACGGTCCGGAGGCGAAGAAACGCCGGTGTGAACTaGTATCGAACGAAACGGCCCACACTGATATCCACGTCGACGCTC | + |
Preference number: 5 (lower is better) Translates to: TVAPTVRRRRNAGVN*YRTKRPTLISTSTL Trigger: GAGCGTCGACGTGGATATCAGTGTGGGCCGTTTCGTTCGATATCAGTTCACACCGGCGTTTCTTCGCCTCCGGACCGTTGGTGCCACGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS-3UTR CAA 90 bp | CACACTAAACTCAAGAGACACCGTTCTGTGAACAGAACTGCCCAGGGCCACGGCTTCTCGGTGACCCGGTaGAGGCGTAGGACGTGCTCG | + |
Preference number: 5 (lower is better) Translates to: HTKLKRHRSVNRTAQGHGFSVTR*RRRTCS Trigger: CGAGCACGTCCTACGCCTCAACCGGGTCACCGAGAA...GCCGTGGCCCTGGGCAGTTCTGTTCACAGAACGGTGTCTCTTGAGTTTAGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS CCA 90 bp | CGGCCCACACTGATATCCACGTCGACGCTCTCCTCCTCCGCATCCTaGTCTTGGTCTGAGATGCACGGCTTGGCAATCTCAAAGAGAACT | + |
Preference number: 5 (lower is better) Translates to: RPTLISTSTLSSSAS*SWSEMHGLAISKRT Trigger: AGTTCTCTTTGAGATTGCCAAGCCGTGCATCTCAGACCAAGACCAGGATGCGGAGGAGGAGAGCGTCGACGTGGATATCAGTGTGGGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS CAA 72 bp | TCGTCGGGCGTGTGTGGGGGCCCCTGGCGTCGCGCCTaGAGCCGGTTCAGGACGCCGCCGCCGGCCTTCTTC | + |
Preference number: 6 (lower is better) Translates to: SSGVCGGPWRRA*SRFRTPPPAFF Trigger: GAAGAAGGCCGGCGGCGGCGTCCTGAACCGGCTCAAGGCGCGACGCCAGGGGCCCCCACACACGCCCGACGA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS CAA 90 bp | CCGGAGCCGTCGTCGGGCGTGTGTGGGGGCCCCTGGCGTCGCGCCTaGAGCCGGTTCAGGACGCCGCCGCCGGCCTTCTTCTTCTCCTCC | + |
Preference number: 6 (lower is better) Translates to: PEPSSGVCGGPWRRA*SRFRTPPPAFFFSS Trigger: GGAGGAGAAGAAGAAGGCCGGCGGCGGCGTCCTGAACCGGCTCAAGGCGCGACGCCAGGGGCCCCCACACACGCCCGACGACGGCTCCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS GCA 72 bp | TCCTCCTTGCCAGCCACCAGCCCGCCGGGCCCAGCCTaGGAACCCGCAGTCGCAGCCTTCGGGTTCGACCCG | + |
Preference number: 6 (lower is better) Translates to: SSLPATSPPGPA*EPAVAAFGFDP Trigger: CGGGTCGAACCCGAAGGCTGCGACTGCGGGTTCGCAGGCTGGGCCCGGCGGGCTGGTGGCTGGCAAGGAGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS TCA 72 bp | CCAACGGTCCGGAGGCGAAGAAACGCCGGTGTGAACTaGTATCGAACGAAACGGCCCACACTGATATCCACG | + |
Preference number: 6 (lower is better) Translates to: PTVRRRRNAGVN*YRTKRPTLIST Trigger: CGTGGATATCAGTGTGGGCCGTTTCGTTCGATATCAGTTCACACCGGCGTTTCTTCGCCTCCGGACCGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS CCA 72 bp | TCCACGTCGACGCTCTCCTCCTCCGCATCCTGGTCTTaGTCTGAGATGCACGGCTTGGCAATCTCAAAGAGA | + |
Preference number: 6 (lower is better) Translates to: STSTLSSSASWS*SEMHGLAISKR Trigger: TCTCTTTGAGATTGCCAAGCCGTGCATCTCAGACCAAGACCAGGATGCGGAGGAGGAGAGCGTCGACGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS CCA 72 bp | CTGATATCCACGTCGACGCTCTCCTCCTCCGCATCCTaGTCTTGGTCTGAGATGCACGGCTTGGCAATCTCA | + |
Preference number: 6 (lower is better) Translates to: LISTSTLSSSAS*SWSEMHGLAIS Trigger: TGAGATTGCCAAGCCGTGCATCTCAGACCAAGACCAGGATGCGGAGGAGGAGAGCGTCGACGTGGATATCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS CCA 72 bp | CCTCCGCATCCTGGTCTTGGTCTGAGATGCACGGCTTaGCAATCTCAAAGAGAACTGTCCCCGTCTCCAGAT | + |
Preference number: 6 (lower is better) Translates to: PPHPGLGLRCTA*QSQRELSPSPD Trigger: ATCTGGAGACGGGGACAGTTCTCTTTGAGATTGCCAAGCCGTGCATCTCAGACCAAGACCAGGATGCGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |
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CDS TCA 72 bp | AGCGCGTCTCATAGGGATTTTCAATCATCAGACGAATaGCGTCCTCGGAGAGCTGCGGGAACTCGTAGATGT | + |
Preference number: 6 (lower is better) Translates to: SASHRDFQSSDE*RPRRAAGTRRC Trigger: ACATCTACGAGTTCCCGCAGCTCTCCGAGGACGTCATTCGTCTGATGATTGAAAATCCCTATGAGACGCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060798.6 |