Pregenerated sensors for UNC119 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002058Ensembl transcript IDs: ENSMUST00000002127.14, ENSMUST00000100755.4, ENSMUST00000108295.8
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGAGACTaGCTCAGGGTCCAGAGCCACCGGATCCATCCCCAAGTGGAGATG | + |
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Preference number: 1 (lower is better) Translates to: SRGLPRDAGHLSSRD*LRVQSHRIHPQVEM Trigger: CATCTCCACTTGGGGATGGATCCGGTGGCTCTGGACCCTGAGTCAGTCTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| 3UTR TCA 90 bp | ATAGCCTGGAGGTGGTGGGCAAGGGACAGGAAATGGTCCCTAACCTaGTCTAGTCACGGTCAAGAAGGGGGCACTACTCTGAAACTCAGG | + |
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Preference number: 1 (lower is better) Translates to: IAWRWWARDRKWSLT*SSHGQEGGTTLKLR Trigger: CCTGAGTTTCAGAGTAGTGCCCCCTTCTTGACCGTGACTAGATCAGGTTAGGGACCATTTCCTGTCCCTTGCCCACCACCTCCAGGCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCGCCCCTCTCACACCTCGGGTAGTTTCTTGGCCCCTGATGGAGGAGGCCAGTGCAGGAGGCCTTCCTaGACATGGGGACAGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: TRPSHTSGSFLAPDGGGQCRRPS*TWGQPA Trigger: GGCTGGCTGTCCCCATGTTCAGGAAGGCCTCCTGCA...CTGGCCTCCTCCATCAGGGGCCAAGAAACTACCCGAGGTGTGAGAGGGGCGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCTCTTGCAGGAGGCCTTCCTGAACATGGGGACAGCCAGCCTCCCCCTGCTGACTAGCTCCAGAGGTTaGCCTAGGGATGCTGGACAC | + |
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Preference number: 3 (lower is better) Translates to: LLLQEAFLNMGTASLPLLTSSRG*PRDAGH Trigger: GTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGT...CAGCAGGGGGAGGCTGGCTGTCCCCATGTTCAGGAAGGCCTCCTGCAAGAGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| 3UTR GCA 72 bp | CTCCCCCTGCTGCCCCTCCCACTAGCTCCAGAGGTTTaGCTAGGGATGCTGGACACCTTTCCTCTCGAGACT | + |
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Preference number: 3 (lower is better) Translates to: LPLLPLPLAPEV*LGMLDTFPLET Trigger: AGTCTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAGGGGCAGCAGGGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| 3UTR TCA 72 bp | GGGTCCAGAGCCACCGGATCCATCCCCAAGTGGAGATaGTGTCGGAGAGGTTACAGCACAGGGTCTAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: GSRATGSIPKWR*CRRGYSTGSRP Trigger: TGGCCTAGACCCTGTGCTGTAACCTCTCCGACATCATCTCCACTTGGGGATGGATCCGGTGGCTCTGGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| 3UTR TCA 72 bp | TTGCCTAGGGATGCTGGACACCTTTCCTCTCGAGACTaGCTCAGGGTCCAGAGCCACCGGATCCATCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: LPRDAGHLSSRD*LRVQSHRIHPQ Trigger: TTGGGGATGGATCCGGTGGCTCTGGACCCTGAGTCAGTCTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| 3UTR TCA 72 bp | AGGTGGTGGGCAAGGGACAGGAAATGGTCCCTAACCTaGTCTAGTCACGGTCAAGAAGGGGGCACTACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RWWARDRKWSLT*SSHGQEGGTTL Trigger: CAGAGTAGTGCCCCCTTCTTGACCGTGACTAGATCAGGTTAGGGACCATTTCCTGTCCCTTGCCCACCACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR GCA 90 bp | ACCCGCCCCTCTCACACCTCGGGTAGTTTCTTGGCCCCTGATGGAGGAGGCCAGTCCGGCCCGATGGGCTaGTTGCCCTGCAGCGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TRPSHTSGSFLAPDGGGQSGPMG*LPCSGP Trigger: GGGGCCGCTGCAGGGCAAGCAGCCCATCGGGCCGGA...CTGGCCTCCTCCATCAGGGGCCAAGAAACTACCCGAGGTGTGAGAGGGGCGGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR GCA 90 bp | ACCCGCCCCTCTCACACCTCGGGTAGTTTCTTGGCCCCTGATGGAGGAGGCCAGATGGGCTGCTTGCCCTaGAGCGGCCCCAGCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TRPSHTSGSFLAPDGGGQMGCLP*SGPSLG Trigger: GCCCAGGCTGGGGCCGCTGCAGGGCAAGCAGCCCAT...CTGGCCTCCTCCATCAGGGGCCAAGAAACTACCCGAGGTGTGAGAGGGGCGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR GCA 90 bp | CTCCTCTTGCAGGAGGCCTTCCTGAACATGGGGACAGCCAGCCTCCCCCTGCTGATGGGCTGCTTGCCCTaGAGCGGCCCCAGCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQEAFLNMGTASLPLLMGCLP*SGPSLG Trigger: GCCCAGGCTGGGGCCGCTGCAGGGCAAGCAGCCCAT...CAGCAGGGGGAGGCTGGCTGTCCCCATGTTCAGGAAGGCCTCCTGCAAGAGGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR CCA 90 bp | CCTCTTGCAGGAGGCCTTCCTGAACATGGGGACAGCCAGCCTCCCCCTGCTGCCCATCCTCCGGCCCGATaGGCTGCTTGCCCTGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PLAGGLPEHGDSQPPPAAHPPAR*AACPAA Trigger: CGCTGCAGGGCAAGCAGCCCATCGGGCCGGAGGATG...GGCAGCAGGGGGAGGCTGGCTGTCCCCATGTTCAGGAAGGCCTCCTGCAAGAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR GCA 90 bp | ACTCAGGGTCCAGAGCCACCGGATCCATCCCCAAGTGGAGATGATGTCGGAGAGGCCCGATGGGCTGCTTaGCCTGCAGCGGCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQGPEPPDPSPSGDDVGEARWAA*PAAAPA Trigger: GGCTGGGGCCGCTGCAGGGCAAGCAGCCCATCGGGC...CTCTCCGACATCATCTCCACTTGGGGATGGATCCGGTGGCTCTGGACCCTGAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR CCA 90 bp | ACCCGCCCCTCTCACACCTCGGGTAGTTTCTTGGCCCCTGATGGAGGAGGCCAGCAAAGCGCCCTGCATTaGGGTCCAGGTCCCGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRPSHTSGSFLAPDGGGQQSALH*GPGPAG Trigger: ACCGGCGGGACCTGGACCCCAATGCAGGGCGCTTTG...CTGGCCTCCTCCATCAGGGGCCAAGAAACTACCCGAGGTGTGAGAGGGGCGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR GCA 90 bp | ATACAGTTTGTCCAGGTCTTACAGGCTGCGATCTGGACCCGCCCCTCTCACACCGCCCGATGGGCTGCTTaGCCTGCAGCGGCCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: IQFVQVLQAAIWTRPSHTARWAA*PAAAPA Trigger: GGCTGGGGCCGCTGCAGGGCAAGCAGCCCATCGGGC...GGTGTGAGAGGGGCGGGTCCAGATCGCAGCCTGTAAGACCTGGACAAACTGTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR GCA 90 bp | CTCCTCTTGCAGGAGGCCTTCCTGAACATGGGGACAGCCAGCCTCCCCCTGCTGTCACCCGTGATCCGCTaGAGCCCCAGCACATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQEAFLNMGTASLPLLSPVIR*SPSTSS Trigger: GGAGGATGTGCTGGGGCTGCAGCGGATCACGGGTGA...CAGCAGGGGGAGGCTGGCTGTCCCCATGTTCAGGAAGGCCTCCTGCAAGAGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR CCA 90 bp | AACTCAGGCCCAGTGGACCTAGCGAGGCATCCAGGAGTCCTCCTCTTGCAGGAGCATCCTCCGGCCCGATaGGCTGCTTGCCCTGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: NSGPVDLARHPGVLLLQEHPPAR*AACPAA Trigger: CGCTGCAGGGCAAGCAGCCCATCGGGCCGGAGGATG...CTCCTGCAAGAGGAGGACTCCTGGATGCCTCGCTAGGTCCACTGGGCCTGAGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR GCA 90 bp | AGTCCTCCTCTTGCAGGAGGCCTTCCTGAACATGGGGACAGCCAGCCTCCCCCTGCGAACAAAGCGCCCTaGATTGGGGTCCAGGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPPLAGGLPEHGDSQPPPANKAP*IGVQVP Trigger: CGGGACCTGGACCCCAATGCAGGGCGCTTTGTTCGC...AGGGGGAGGCTGGCTGTCCCCATGTTCAGGAAGGCCTCCTGCAAGAGGAGGACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR GCA 90 bp | AACTCAGGCCCAGTGGACCTAGCGAGGCATCCAGGAGTCCTCCTCTTGCAGGAGGCGAACAAAGCGCCCTaGATTGGGGTCCAGGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NSGPVDLARHPGVLLLQEANKAP*IGVQVP Trigger: CGGGACCTGGACCCCAATGCAGGGCGCTTTGTTCGC...CTCCTGCAAGAGGAGGACTCCTGGATGCCTCGCTAGGTCCACTGGGCCTGAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR CCA 90 bp | TTCCTCTCGAGACTGACTCAGGGTCCAGAGCCACCGGATCCATCCCCAAGTGGACAAAGCGCCCTGCATTaGGGTCCAGGTCCCGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLSRLTQGPEPPDPSPSGQSALH*GPGPAG Trigger: ACCGGCGGGACCTGGACCCCAATGCAGGGCGCTTTG...TCCACTTGGGGATGGATCCGGTGGCTCTGGACCCTGAGTCAGTCTCGAGAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| 3UTR CAA 72 bp | CCTCCCCCTGCTGCCCCTCCCACTAGCTCCAGAGGTTaGCCTAGGGATGCTGGACACCTTTCCTCTCGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PPPAAPPTSSRG*PRDAGHLSSRD Trigger: GTCTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAGGGGCAGCAGGGGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| 3UTR CAA 72 bp | CCAGTGGACCTAGCGAGGCATCCAGGAGTCCTCCTCTaGCAGGAGGCCTTCCTGAACATGGGGACAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PVDLARHPGVLL*QEAFLNMGTAS Trigger: GCTGGCTGTCCCCATGTTCAGGAAGGCCTCCTGCAAGAGGAGGACTCCTGGATGCCTCGCTAGGTCCACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | TTCCTCTCGAGACTGACTCAGGGTCCAGAGCCACCGGATCCATCCCCAAGTGGAACAGGTAGTCACCCGTaGTCCGCTGCAGCCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLSRLTQGPEPPDPSPSGTGSHP*SAAAPA Trigger: TGCTGGGGCTGCAGCGGATCACGGGTGACTACCTGT...TCCACTTGGGGATGGATCCGGTGGCTCTGGACCCTGAGTCAGTCTCGAGAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | CTGACTCAGGGTCCAGAGCCACCGGATCCATCCCCAAGTGGAGATGATGTCGGAACAGGTAGTCACCCGTaGTCCGCTGCAGCCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LTQGPEPPDPSPSGDDVGTGSHP*SAAAPA Trigger: TGCTGGGGCTGCAGCGGATCACGGGTGACTACCTGT...TCCGACATCATCTCCACTTGGGGATGGATCCGGTGGCTCTGGACCCTGAGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | CAGGCTGCGATCTGGACCCGCCCCTCTCACACCTCGGGTAGTTTCTTGGCCCCTGGAGGAAGGCAGGTGTaGACTGGTAGCGAACAAAGC | + |
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Preference number: 4 (lower is better) Translates to: QAAIWTRPSHTSGSFLAPGGRQV*TGSEQS Trigger: GCTTTGTTCGCTACCAGTTCACACCTGCCTTCCTCC...AGGGGCCAAGAAACTACCCGAGGTGTGAGAGGGGCGGGTCCAGATCGCAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | CTCCTCTTGCAGGAGGCCTTCCTGAACATGGGGACAGCCAGCCTCCCCCTGCTGTCATGCGGAAGTTGTTaGCCGGCTTGTCTCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: LLLQEAFLNMGTASLPLLSCGSC*PACLPL Trigger: CAGTGGGAGACAAGCCGGTCAACAACTTCCGCATGA...CAGCAGGGGGAGGCTGGCTGTCCCCATGTTCAGGAAGGCCTCCTGCAAGAGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | AGACTGACTCAGGGTCCAGAGCCACCGGATCCATCCCCAAGTGGAGATGATGTCCCAGGTCCCGCCGGTTaGTGGGCAACCGTTCCGAAA | + |
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Preference number: 4 (lower is better) Translates to: RLTQGPEPPDPSPSGDDVPGPAG*WATVPK Trigger: TTTCGGAACGGTTGCCCATCAACCGGCGGGACCTGG...GACATCATCTCCACTTGGGGATGGATCCGGTGGCTCTGGACCCTGAGTCAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | AGTCCTCCTCTTGCAGGAGGCCTTCCTGAACATGGGGACAGCCAGCCTCCCCCTGGAGGAAGGCAGGTGTaGACTGGTAGCGAACAAAGC | + |
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Preference number: 4 (lower is better) Translates to: SPPLAGGLPEHGDSQPPPGGRQV*TGSEQS Trigger: GCTTTGTTCGCTACCAGTTCACACCTGCCTTCCTCC...AGGGGGAGGCTGGCTGTCCCCATGTTCAGGAAGGCCTCCTGCAAGAGGAGGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR GCA 90 bp | AGGGTCCAGAGCCACCGGATCCATCCCCAAGTGGAGATGATGTCGGAGAGGTTAACCGTGGCTCCCACCTaGCTTAGGCGGAGGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: RVQSHRIHPQVEMMSERLTVAPT*LRRRKA Trigger: TGCCTTCCTCCGCCTAAGGCAGGTGGGAGCCACGGT...TAACCTCTCCGACATCATCTCCACTTGGGGATGGATCCGGTGGCTCTGGACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR GCA 90 bp | CCTCCCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGAACCGTGGCTCCCACCTaGCTTAGGCGGAGGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: PPTSSRGLPRDAGHLSSRTVAPT*LRRRKA Trigger: TGCCTTCCTCCGCCTAAGGCAGGTGGGAGCCACGGT...TCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR CCA 90 bp | CCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGAGACTCAAAGCGCCCTGCATTaGGGTCCAGGTCCCGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: PLAPEVCLGMLDTFPLETQSALH*GPGPAG Trigger: ACCGGCGGGACCTGGACCCCAATGCAGGGCGCTTTG...AGTCTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | GTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGAGACTGACTCAGGGTCCAGACCAGGTCCCGCCGGTTaGTGGGCAACCGTTCCGAAA | + |
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Preference number: 4 (lower is better) Translates to: VCLGMLDTFPLETDSGSRPGPAG*WATVPK Trigger: TTTCGGAACGGTTGCCCATCAACCGGCGGGACCTGG...TCTGGACCCTGAGTCAGTCTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | CCTCCCCCTGCTGCCCCTCCCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGAGACGAATCATCTCACTaGTTAGCTCCTCGGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: PPPAAPPTSSRGLPRDAGDESSH*LAPRRE Trigger: CTCTCTCCGAGGAGCTAATCAGTGAGATGATTCGTC...TCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAGGGGCAGCAGGGGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 |
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| CDS-3UTR TCA 90 bp | CCTCCCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGACAAAGGTCAGGACCCTaGGCCAGACCCTGTAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: PPTSSRGLPRDAGHLSSRQRSGP*ARPCRD Trigger: GTCCCTACAGGGTCTGGCTCAGGGTCCTGACCTTTG...TCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | CCTCCCCCTGCTGCCCCTCCCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGATGGGTCTCATACGGGTaGCGAATCATCTCACTGACT | + |
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Preference number: 4 (lower is better) Translates to: PPPAAPPTSSRGLPRDAGWVSYG*RIISLT Trigger: AGTCAGTGAGATGATTCGTCACCCGTATGAGACCCA...TCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAGGGGCAGCAGGGGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108295.8 |
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| CDS-3UTR GCA 90 bp | GTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGAGACTGACTCAGGGTCCAGAGCGAACAAAGCGCCCTaGATTGGGGTCCAGGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: VCLGMLDTFPLETDSGSRANKAP*IGVQVP Trigger: CGGGACCTGGACCCCAATGCAGGGCGCTTTGTTCGC...TCTGGACCCTGAGTCAGTCTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR GCA 90 bp | CCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGAGACTACCGTGGCTCCCACCTaGCTTAGGCGGAGGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: PLAPEVCLGMLDTFPLETTVAPT*LRRRKA Trigger: TGCCTTCCTCCGCCTAAGGCAGGTGGGAGCCACGGT...AGTCTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | CTGACTCAGGGTCCAGAGCCACCGGATCCATCCCCAAGTGGAGATGATGTCGGAGGAGGAAGGCAGGTGTaGACTGGTAGCGAACAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LTQGPEPPDPSPSGDDVGGGRQV*TGSEQS Trigger: GCTTTGTTCGCTACCAGTTCACACCTGCCTTCCTCC...TCCGACATCATCTCCACTTGGGGATGGATCCGGTGGCTCTGGACCCTGAGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | ACTCAGGGTCCAGAGCCACCGGATCCATCCCCAAGTGGAGATGATGTCGGAGAGTCATGCGGAAGTTGTTaGCCGGCTTGTCTCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: TQGPEPPDPSPSGDDVGESCGSC*PACLPL Trigger: CAGTGGGAGACAAGCCGGTCAACAACTTCCGCATGA...CTCTCCGACATCATCTCCACTTGGGGATGGATCCGGTGGCTCTGGACCCTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | CCTCCCCCTGCTGCCCCTCCCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGAGGAAGTCGAAGCTTTTaGGGAGCTGGTTTCGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: PPPAAPPTSSRGLPRDAGGSRSF*GAGFES Trigger: ACTTTCGAAACCAGCTCCTCAAAAGCTTCGACTTCC...TCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAGGGGCAGCAGGGGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | ACCCGCCCCTCTCACACCTCGGGTAGTTTCTTGGCCCCTGATGGAGGAGGCCAGGGAAGTCGAAGCTTTTaGGGAGCTGGTTTCGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRPSHTSGSFLAPDGGGQGSRSF*GAGFES Trigger: ACTTTCGAAACCAGCTCCTCAAAAGCTTCGACTTCC...CTGGCCTCCTCCATCAGGGGCCAAGAAACTACCCGAGGTGTGAGAGGGGCGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | AGGAGTCCTCCTCTTGCAGGAGGCCTTCCTGAACATGGGGACAGCCAGCCTCCCAAAAAGGACAGTCCCTaGGTCCATGTCACGGATCTT | + |
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Preference number: 4 (lower is better) Translates to: RSPPLAGGLPEHGDSQPPKKDSP*VHVTDL Trigger: AAGATCCGTGACATGGACTCAGGGACTGTCCTTTTT...GGGAGGCTGGCTGTCCCCATGTTCAGGAAGGCCTCCTGCAAGAGGAGGACTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR GCA 90 bp | GATGATGTCGGAGAGGTTACAGCACAGGGTCTAGGCCAGAGCCTCAGGGGCAGCTCTTGCTGCTGGGGATaGAGAAGCCAAAGTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: DDVGEVTAQGLGQSLRGSSCCWG*RSQSGS Trigger: ACTTCCACTTTGGCTTCTGCATCCCCAGCAGCAAGA...GCTGCCCCTGAGGCTCTGGCCTAGACCCTGTGCTGTAACCTCTCCGACATCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | AAAACTATATACAGTTTGTCCAGGTCTTACAGGCTGCGATCTGGACCCGCCCCTCCAGGTCCCGCCGGTTaGTGGGCAACCGTTCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KTIYSLSRSYRLRSGPAPPGPAG*WATVPK Trigger: TTTCGGAACGGTTGCCCATCAACCGGCGGGACCTGG...AGGGGCGGGTCCAGATCGCAGCCTGTAAGACCTGGACAAACTGTATATAGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | GTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGAGACTGACTCAGGGTCCAGATCATGCGGAAGTTGTTaGCCGGCTTGTCTCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VCLGMLDTFPLETDSGSRSCGSC*PACLPL Trigger: CAGTGGGAGACAAGCCGGTCAACAACTTCCGCATGA...TCTGGACCCTGAGTCAGTCTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR GCA 90 bp | AAAACTATATACAGTTTGTCCAGGTCTTACAGGCTGCGATCTGGACCCGCCCCTTCACCCGTGATCCGCTaGAGCCCCAGCACATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTIYSLSRSYRLRSGPAPSPVIR*SPSTSS Trigger: GGAGGATGTGCTGGGGCTGCAGCGGATCACGGGTGA...AGGGGCGGGTCCAGATCGCAGCCTGTAAGACCTGGACAAACTGTATATAGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | TTCCTCTCGAGACTGACTCAGGGTCCAGAGCCACCGGATCCATCCCCAAGTGGATGGGTCTCATACGGGTaGCGAATCATCTCACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: FLSRLTQGPEPPDPSPSGWVSYG*RIISLI Trigger: AATCAGTGAGATGATTCGTCACCCGTATGAGACCCA...TCCACTTGGGGATGGATCCGGTGGCTCTGGACCCTGAGTCAGTCTCGAGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 |
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| CDS-3UTR GCA 90 bp | CCTCCCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGATCTTGCTGCTGGGGATaGAGAAGCCAAAGTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPTSSRGLPRDAGHLSSRSCCWG*RSQSGS Trigger: ACTTCCACTTTGGCTTCTGCATCCCCAGCAGCAAGA...TCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | CTCCCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGAGAAAAAGGACAGTCCCTaGGTCCATGTCACGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLAPEVCLGMLDTFPLEKKDSP*VHVTDL Trigger: AAGATCCGTGACATGGACTCAGGGACTGTCCTTTTT...CTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | AGGGTCCAGAGCCACCGGATCCATCCCCAAGTGGAGATGATGTCGGAGAGGTTAAAAAAGGACAGTCCCTaGGTCCATGTCACGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVQSHRIHPQVEMMSERLKKDSP*VHVTDL Trigger: AAGATCCGTGACATGGACTCAGGGACTGTCCTTTTT...TAACCTCTCCGACATCATCTCCACTTGGGGATGGATCCGGTGGCTCTGGACCCT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | AGGGTCCAGAGCCACCGGATCCATCCCCAAGTGGAGATGATGTCGGAGAGGTTAGGAAGTCGAAGCTTTTaGGGAGCTGGTTTCGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVQSHRIHPQVEMMSERLGSRSF*GAGFES Trigger: ACTTTCGAAACCAGCTCCTCAAAAGCTTCGACTTCC...TAACCTCTCCGACATCATCTCCACTTGGGGATGGATCCGGTGGCTCTGGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR TCA 90 bp | CCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGAGACTGACGAATCATCTCACTaGTTAGCTCCTCGGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLAPEVCLGMLDTFPLETDESSH*LAPRRE Trigger: CTCTCTCCGAGGAGCTAATCAGTGAGATGATTCGTC...AGTCTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 |
||
| CDS-3UTR TCA 90 bp | CCTCCCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGATGGGTCTCATACGGGTaGCGAATCATCTCACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: PPTSSRGLPRDAGHLSSRWVSYG*RIISLI Trigger: AATCAGTGAGATGATTCGTCACCCGTATGAGACCCA...TCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 |
||
| CDS-3UTR GCA 90 bp | GTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGAGACTGACTCAGGGTCCAGAAATCATCTCACTGACTaGAAGAGAGGCCCATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCLGMLDTFPLETDSGSRNHLTD*KRGPSR Trigger: CCTGGATGGGCCTCTCTTGCAGTCAGTGAGATGATT...TCTGGACCCTGAGTCAGTCTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108295.8 |
||
| CDS-3UTR TCA 90 bp | TTTGTCTGTGAACCGACAACTATAAATAGCCTGGAGGTGGTGGGCAAGGGACAGGACGAATCATCTCACTaGCTGCAAGAGAGGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FVCEPTTINSLEVVGKGQDESSH*LQERPI Trigger: GATGGGCCTCTCTTGCAGTCAGTGAGATGATTCGTC...CTGTCCCTTGCCCACCACCTCCAGGCTATTTATAGTTGTCGGTTCACAGACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108295.8 |
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| CDS-3UTR GCA 90 bp | ACTCAGGGTCCAGAGCCACCGGATCCATCCCCAAGTGGAGATGATGTCGGAGAGACTGTAGGAATAGTCTaGTTTGTTATGCATCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQGPEPPDPSPSGDDVGETVGIV*FVMHHQ Trigger: CTGGTGATGCATAACAAAGCAGACTATTCCTACAGT...CTCTCCGACATCATCTCCACTTGGGGATGGATCCGGTGGCTCTGGACCCTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
||
| CDS-3UTR GCA 90 bp | CCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGAGACTACTGTAGGAATAGTCTaGTTTGTTATGCATCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLAPEVCLGMLDTFPLETTVGIV*FVMHHQ Trigger: CTGGTGATGCATAACAAAGCAGACTATTCCTACAGT...AGTCTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS CCA 90 bp | GCTCCGACTCGGACCCGGACTCAGCTTCCGCCCCAGGCTCCCGCGTaGGCTCCGCGCTCCGGTTCGAGGCCCCTGGAACGGGCTCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: APTRTRTQLPPQAPA*APRSGSRPLERAPP Trigger: GGGCGGAGCCCGTTCCAGGGGCCTCGAACCGGAGCGCGGAGCCCACGCGGGAGCCTGGGGCGGAAGCTGAGTCCGGGTCCGAGTCGGAGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR CAA 90 bp | ACCCGCCCCTCTCACACCTCGGGTAGTTTCTTGGCCCCTGATGGAGGAGGCCAGACAAAGCGCCCTGCATaGGGGTCCAGGTCCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TRPSHTSGSFLAPDGGGQTKRPA*GSRSRR Trigger: CCGGCGGGACCTGGACCCCAATGCAGGGCGCTTTGT...CTGGCCTCCTCCATCAGGGGCCAAGAAACTACCCGAGGTGTGAGAGGGGCGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS-3UTR CAA 90 bp | CTCCTCTTGCAGGAGGCCTTCCTGAACATGGGGACAGCCAGCCTCCCCCTGCTGACAAAGCGCCCTGCATaGGGGTCCAGGTCCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLQEAFLNMGTASLPLLTKRPA*GSRSRR Trigger: CCGGCGGGACCTGGACCCCAATGCAGGGCGCTTTGT...CAGCAGGGGGAGGCTGGCTGTCCCCATGTTCAGGAAGGCCTCCTGCAAGAGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR CAA 90 bp | CCTCCCCCTGCTGCCCCTCCCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGATCCAGGTCCCGCCGGTaGATGGGCAACCGTTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: PPPAAPPTSSRGLPRDAGSRSRR*MGNRSE Trigger: TTCGGAACGGTTGCCCATCAACCGGCGGGACCTGGA...TCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAGGGGCAGCAGGGGGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR CAA 90 bp | CAGGCTGCGATCTGGACCCGCCCCTCTCACACCTCGGGTAGTTTCTTGGCCCCTTCCAGGTCCCGCCGGTaGATGGGCAACCGTTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: QAAIWTRPSHTSGSFLAPSRSRR*MGNRSE Trigger: TTCGGAACGGTTGCCCATCAACCGGCGGGACCTGGA...AGGGGCCAAGAAACTACCCGAGGTGTGAGAGGGGCGGGTCCAGATCGCAGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002127.14 ENSMUST00000108295.8 |
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| CDS TCA 90 bp | ACTCCACCGTGGCTCCCACCTGCCTTAGGCGGAGGAAGGCAGGTGTaGACTGGTAGCGAACAAAGCGCCCTGCATTGGGGTCCAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TPPWLPPALGGGRQV*TGSEQSALHWGPGP Trigger: GGGACCTGGACCCCAATGCAGGGCGCTTTGTTCGCTACCAGTTCACACCTGCCTTCCTCCGCCTAAGGCAGGTGGGAGCCACGGTGGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR CAA 90 bp | CCTCTTGCAGGAGGCCTTCCTGAACATGGGGACAGCCAGCCTCCCCCTGCTGCCTCGATCATGCGGAAGTaGTTGACCGGCTTGTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLAGGLPEHGDSQPPPAASIMRK*LTGLSP Trigger: GGGAGACAAGCCGGTCAACAACTTCCGCATGATCGA...GGCAGCAGGGGGAGGCTGGCTGTCCCCATGTTCAGGAAGGCCTCCTGCAAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR CAA 90 bp | CCTCCCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGATCCAGGTCCCGCCGGTaGATGGGCAACCGTTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: PPTSSRGLPRDAGHLSSRSRSRR*MGNRSE Trigger: TTCGGAACGGTTGCCCATCAACCGGCGGGACCTGGA...TCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR CAA 90 bp | CCTCCCCCTGCTGCCCCTCCCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGAAAGTTGTTGACCGGCTaGTCTCCCACTGTGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: PPPAAPPTSSRGLPRDAGKLLTG*SPTVNS Trigger: GGAGTTCACAGTGGGAGACAAGCCGGTCAACAACTT...TCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAGGGGCAGCAGGGGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS GCA 90 bp | GCTGTCAGACTGGGTCTCATACGGGTGACGAATCATCTCACTGACTaGAAGAGAGGCCCATCCAGGGCAAAGGTCAGGACCCTGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AVRLGLIRVTNHLTD*KRGPSRAKVRTLSQ Trigger: CTGGCTCAGGGTCCTGACCTTTGCCCTGGATGGGCCTCTCTTGCAGTCAGTGAGATGATTCGTCACCCGTATGAGACCCAGTCTGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108295.8 |
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| CDS-3UTR CAA 90 bp | CTCCTCTTGCAGGAGGCCTTCCTGAACATGGGGACAGCCAGCCTCCCCCTGCTGTGGAAGTCGAAGCTTTaGAGGAGCTGGTTTCGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLLQEAFLNMGTASLPLLWKSKL*RSWFRK Trigger: CTTTCGAAACCAGCTCCTCAAAAGCTTCGACTTCCA...CAGCAGGGGGAGGCTGGCTGTCCCCATGTTCAGGAAGGCCTCCTGCAAGAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS TCA 90 bp | TCACTGACTGCAAGAGAGGCCCATCCAGGGCAAAGGTCAGGACCCTaGGCCAGACCCTGTAGGGACTTCAGAATTAGCTCCTCGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLTAREAHPGQRSGP*ARPCRDFRISSSER Trigger: TCTCTCCGAGGAGCTAATTCTGAAGTCCCTACAGGGTCTGGCTCAGGGTCCTGACCTTTGCCCTGGATGGGCCTCTCTTGCAGTCAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108295.8 |
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| CDS-3UTR CAA 90 bp | CCTCCCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGATCGATCATGCGGAAGTaGTTGACCGGCTTGTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PPTSSRGLPRDAGHLSSRSIMRK*LTGLSP Trigger: GGGAGACAAGCCGGTCAACAACTTCCGCATGATCGA...TCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR CAA 90 bp | CTCCCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGAGAAGTTGTTGACCGGCTaGTCTCCCACTGTGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPLAPEVCLGMLDTFPLEKLLTG*SPTVNS Trigger: GGAGTTCACAGTGGGAGACAAGCCGGTCAACAACTT...CTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR CAA 90 bp | CCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGAGACTTCGATCATGCGGAAGTaGTTGACCGGCTTGTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLAPEVCLGMLDTFPLETSIMRK*LTGLSP Trigger: GGGAGACAAGCCGGTCAACAACTTCCGCATGATCGA...AGTCTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR CAA 90 bp | CCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGAGACTAAGTTGTTGACCGGCTaGTCTCCCACTGTGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLAPEVCLGMLDTFPLETKLLTG*SPTVNS Trigger: GGAGTTCACAGTGGGAGACAAGCCGGTCAACAACTT...AGTCTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
||
| CDS-3UTR CAA 90 bp | CTGACTCAGGGTCCAGAGCCACCGGATCCATCCCCAAGTGGAGATGATGTCGGATGGAAGTCGAAGCTTTaGAGGAGCTGGTTTCGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTQGPEPPDPSPSGDDVGWKSKL*RSWFRK Trigger: CTTTCGAAACCAGCTCCTCAAAAGCTTCGACTTCCA...TCCGACATCATCTCCACTTGGGGATGGATCCGGTGGCTCTGGACCCTGAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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| CDS-3UTR CAA 90 bp | CTCCCACTAGCTCCAGAGGTTTGCCTAGGGATGCTGGACACCTTTCCTCTCGAGTGGAAGTCGAAGCTTTaGAGGAGCTGGTTTCGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPLAPEVCLGMLDTFPLEWKSKL*RSWFRK Trigger: CTTTCGAAACCAGCTCCTCAAAAGCTTCGACTTCCA...CTCGAGAGGAAAGGTGTCCAGCATCCCTAGGCAAACCTCTGGAGCTAGTGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
||
| CDS CAA 72 bp | ACAAAGCGCCCTGCATTGGGGTCCAGGTCCCGCCGGTaGATGGGCAACCGTTCCGAAACAGGGGGCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TKRPALGSRSRR*MGNRSETGGFL Trigger: CAAGAAGCCCCCTGTTTCGGAACGGTTGCCCATCAACCGGCGGGACCTGGACCCCAATGCAGGGCGCTTTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
||
| CDS TCA 72 bp | TGGCTCCCACCTGCCTTAGGCGGAGGAAGGCAGGTGTaGACTGGTAGCGAACAAAGCGCCCTGCATTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: WLPPALGGGRQV*TGSEQSALHWG Trigger: ACCCCAATGCAGGGCGCTTTGTTCGCTACCAGTTCACACCTGCCTTCCTCCGCCTAAGGCAGGTGGGAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
||
| CDS GCA 72 bp | CTGGGTCTCATACGGGTGACGAATCATCTCACTGACTaGAAGAGAGGCCCATCCAGGGCAAAGGTCAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: LGLIRVTNHLTD*KRGPSRAKVRT Trigger: GGTCCTGACCTTTGCCCTGGATGGGCCTCTCTTGCAGTCAGTGAGATGATTCGTCACCCGTATGAGACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108295.8 |
||
| CDS CAA 72 bp | CGGTTGATGGGCAACCGTTCCGAAACAGGGGGCTTCTaGATTTCAAAAAGGACAGTCCCTGAGTCCATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RLMGNRSETGGF*ISKRTVPESMS Trigger: TGACATGGACTCAGGGACTGTCCTTTTTGAAATCAAGAAGCCCCCTGTTTCGGAACGGTTGCCCATCAACCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000002127.14 ENSMUST00000100755.4 ENSMUST00000108295.8 |
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