Pregenerated sensors for UMPS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022814Ensembl transcript IDs: ENSMUST00000023510.7, ENSMUST00000131990.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCTGCTGGAGAATCTCCAGCATTTGGGAGAGCGTGCACACGGCGTaGAGGCGGATCCCCTGGGCCTGCAGCTTGTCCTTGCCTCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: CCWRISSIWESVHTA*RRIPWACSLSLPPC Trigger: GCAGGGAGGCAAGGACAAGCTGCAGGCCCAGGGGATCCGCCTCCACGCCGTGTGCACGCTCTCCCAAATGCTGGAGATTCTCCAGCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR GCA 90 bp | GTCGACATGAGTTTTGAGCATGCAGATGCTGGGTCCCAAGGCGTCTaGGAGCTGCAGCAGCTCCCTGGCCTCCGACACATCGGCAGACAG | + |
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Preference number: 1 (lower is better) Translates to: VDMSFEHADAGSQGV*ELQQLPGLRHIGRQ Trigger: CTGTCTGCCGATGTGTCGGAGGCCAGGGAGCTGCTGCAGCTCGCAGACGCCTTGGGACCCAGCATCTGCATGCTCAAAACTCATGTCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR CCA 90 bp | TGCAGATGCTGGGTCCCAAGGCGTCTGCGAGCTGCAGCAGCTCCCTaGCCTCCGACACATCGGCAGACAGACACAGATTGGTCTCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: CRCWVPRRLRAAAAP*PPTHRQTDTDWSPS Trigger: AGAAGGAGACCAATCTGTGTCTGTCTGCCGATGTGTCGGAGGCCAGGGAGCTGCTGCAGCTCGCAGACGCCTTGGGACCCAGCATCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR GCA 90 bp | GCCTCCGACACATCGGCAGACAGACACAGATTGGTCTCCTTCTTCTaGATGAGCCGGAGCAGCTTTGAGGCAAGCGGGTGGGTTCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: ASDTSADRHRLVSFF*MSRSSFEASGWVPG Trigger: GCCTGGAACCCACCCGCTTGCCTCAAAGCTGCTCCGGCTCATGCAGAAGAAGGAGACCAATCTGTGTCTGTCTGCCGATGTGTCGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR TCA 90 bp | CCGACACATCGGCAGACAGACACAGATTGGTCTCCTTCTTCTGCATaGGCCGGAGCAGCTTTGAGGCAAGCGGGTGGGTTCCAGGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: PTHRQTDTDWSPSSA*AGAALRQAGGFQAA Trigger: AGCTGCCTGGAACCCACCCGCTTGCCTCAAAGCTGCTCCGGCTCATGCAGAAGAAGGAGACCAATCTGTGTCTGTCTGCCGATGTGTCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR TCA 90 bp | CAGACACAGATTGGTCTCCTTCTTCTGCATGAGCCGGAGCAGCTTTaGGGCAAGCGGGTGGGTTCCAGGCAGCTCAGCTCGAGCACCAAA | + |
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Preference number: 1 (lower is better) Translates to: QTQIGLLLLHEPEQL*GKRVGSRQLSSSTK Trigger: TTTGGTGCTCGAGCTGAGCTGCCTGGAACCCACCCGCTTGCCTCAAAGCTGCTCCGGCTCATGCAGAAGAAGGAGACCAATCTGTGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR CCA 90 bp | GTCTCCTTCTTCTGCATGAGCCGGAGCAGCTTTGAGGCAAGCGGGTaGGTTCCAGGCAGCTCAGCTCGAGCACCAAAGCTGAGTTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: VSFFCMSRSSFEASG*VPGSSARAPKLSSL Trigger: CAAAGAACTCAGCTTTGGTGCTCGAGCTGAGCTGCCTGGAACCCACCCGCTTGCCTCAAAGCTGCTCCGGCTCATGCAGAAGAAGGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR TCA 90 bp | ATACAATGCTGCAGAGTCTCTCTTCACAGACCCTGTGCAGGGCCCTaGGCACTGGTCTCTGAAGCCAGCGGCTTTTGGGATACCACCCAT | + |
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Preference number: 1 (lower is better) Translates to: IQCCRVSLHRPCAGP*ALVSEASGFWDTTH Trigger: ATGGGTGGTATCCCAAAAGCCGCTGGCTTCAGAGACCAGTGCTCAGGGCCCTGCACAGGGTCTGTGAAGAGAGACTCTGCAGCATTGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR GCA 90 bp | GAAGCCAATGACAAATTCACAGTGCTCCTCAGCCATCCCGACTGCTaGCTTGGTGTAGTTTCCAGTGGCCAAGGAGCCAGCAGAGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: EANDKFTVLLSHPDC*LGVVSSGQGASRAH Trigger: ATGAGCTCTGCTGGCTCCTTGGCCACTGGAAACTACACCAAGGCAGCAGTCGGGATGGCTGAGGAGCACTGTGAATTTGTCATTGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR TCA 90 bp | TGTAGTTTCCAGTGGCCAAGGAGCCAGCAGAGCTCATTTCTGCAATaGGCAGGCAGGCTCGATGTAAAGGCAGACCCACTTCCTGTAAGC | + |
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Preference number: 1 (lower is better) Translates to: CSFQWPRSQQSSFLQ*AGRLDVKADPLPVS Trigger: GCTTACAGGAAGTGGGTCTGCCTTTACATCGAGCCTGCCTGCTCATTGCAGAAATGAGCTCTGCTGGCTCCTTGGCCACTGGAAACTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR GCA 90 bp | AATGAAGCCAATGACAAATTCACAGTGCTCCTCAGCCATCCCGACTaGTGCCTTGGTGTAGTTTCCAGTGGCCAAGGAGCCAGCAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: NEANDKFTVLLSHPD*CLGVVSSGQGASRA Trigger: AGCTCTGCTGGCTCCTTGGCCACTGGAAACTACACCAAGGCAGCAGTCGGGATGGCTGAGGAGCACTGTGAATTTGTCATTGGCTTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR TCA 90 bp | CGGTCCAACAGCACTATGGCATCAGTTACCTTTAGACCCTCCTTCTaGAGAACTTCCACAGTCTCCAAAACACTGGCTCCGCTGGTGACG | + |
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Preference number: 1 (lower is better) Translates to: RSNSTMASVTFRPSF*RTSTVSKTLAPLVT Trigger: CGTCACCAGCGGAGCCAGTGTTTTGGAGACTGTGGAAGTTCTTCAGAAGGAGGGTCTAAAGGTAACTGATGCCATAGTGCTGTTGGACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR TCA 90 bp | AGCGGCTTTTGGGATACCACCCATTTTCAGTGTCTTCTGTCTCACTaGACAGCAAGCCTACTCAGATATGCCTCCCAGGCAGCCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: SGFWDTTHFQCLLSH*TASLLRYASQAAFL Trigger: CAGGAAGGCTGCCTGGGAGGCATATCTGAGTAGGCTTGCTGTTCAGTGAGACAGAAGACACTGAAAATGGGTGGTATCCCAAAAGCCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR CCA 90 bp | GCTCAAACCCACCTGAGGCTCATGCCTTGTTATGCTTTTACTCGATaGGACCATGCTGCAGTCGGACTCCTTCAAGCACGTGCTATTGCT | + |
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Preference number: 1 (lower is better) Translates to: AQTHLRLMPCYAFTR*DHAAVGLLQARAIA Trigger: AGCAATAGCACGTGCTTGAAGGAGTCCGACTGCAGCATGGTCCCATCGAGTAAAAGCATAACAAGGCATGAGCCTCAGGTGGGTTTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR GCA 90 bp | CCTGAGGCTCATGCCTTGTTATGCTTTTACTCGATGGGACCATGCTaGAGTCGGACTCCTTCAAGCACGTGCTATTGCTACTTTGATTCC | + |
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Preference number: 1 (lower is better) Translates to: PEAHALLCFYSMGPC*SRTPSSTCYCYFDS Trigger: GGAATCAAAGTAGCAATAGCACGTGCTTGAAGGAGTCCGACTGCAGCATGGTCCCATCGAGTAAAAGCATAACAAGGCATGAGCCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR GCA 90 bp | CCACCTGAGGCTCATGCCTTGTTATGCTTTTACTCGATGGGACCATaGTGCAGTCGGACTCCTTCAAGCACGTGCTATTGCTACTTTGAT | + |
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Preference number: 1 (lower is better) Translates to: PPEAHALLCFYSMGP*CSRTPSSTCYCYFD Trigger: ATCAAAGTAGCAATAGCACGTGCTTGAAGGAGTCCGACTGCAGCATGGTCCCATCGAGTAAAAGCATAACAAGGCATGAGCCTCAGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR TCA 90 bp | AACTCCTCCATCACATCCAGAGTAAAATCATTCAGAATGTCGACATaGGTTTTGAGCATGCAGATGCTGGGTCCCAAGGCGTCTGCGAGC | + |
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Preference number: 1 (lower is better) Translates to: NSSITSRVKSFRMST*VLSMQMLGPKASAS Trigger: GCTCGCAGACGCCTTGGGACCCAGCATCTGCATGCTCAAAACTCATGTCGACATTCTGAATGATTTTACTCTGGATGTGATGGAGGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR TCA 90 bp | CCCACTTCCTGTAAGCCTTTCACAACTCCTGAGCCTGGCACGACGTaGGCATTCACTATATCTGCCCATGAAGCTATTTTAAAGGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: PTSCKPFTTPEPGTT*AFTISAHEAILKVP Trigger: TGGCACCTTTAAAATAGCTTCATGGGCAGATATAGTGAATGCTCACGTCGTGCCAGGCTCAGGAGTTGTGAAAGGCTTACAGGAAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR TCA 90 bp | CCCAAGGAATCTGAAAGGTGGCAGCTGCCAAACAAATACCAGTCTTaGGAAAGCTTTCAAAAGGGCTGCTCATTACAGTACCAATGCAGT | + |
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Preference number: 1 (lower is better) Translates to: PKESERWQLPNKYQS*ESFQKGCSLQYQCS Trigger: ACTGCATTGGTACTGTAATGAGCAGCCCTTTTGAAAGCTTTCTCAAGACTGGTATTTGTTTGGCAGCTGCCACCTTTCAGATTCCTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR TCA 90 bp | GAGCGGTCAGATCACACTGTAGGAGGCACCCAATTTCTCAGTCTGTaGGCAAATATTTCTGTACTAAAATTTTCCCTCTTAGCACTGGCA | + |
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Preference number: 1 (lower is better) Translates to: ERSDHTVGGTQFLSL*ANISVLKFSLLALA Trigger: TGCCAGTGCTAAGAGGGAAAATTTTAGTACAGAAATATTTGCTCACAGACTGAGAAATTGGGTGCCTCCTACAGTGTGATCTGACCGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR CCA 90 bp | TTTCCAATATCAGCGAATTTCCTGTCTTCAAATATTAAGAACTCGTaGCGTTTTGCCAGGGCTGTCAACTCCTCCATCACATCCAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: FPISANFLSSNIKNS*RFARAVNSSITSRV Trigger: TACTCTGGATGTGATGGAGGAGTTGACAGCCCTGGCAAAACGCCACGAGTTCTTAATATTTGAAGACAGGAAATTCGCTGATATTGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR GCA 90 bp | AAAAGAATTAAGCAGTATAGCCCAAGGAATCTGAAAGGTGGCAGCTaGCAAACAAATACCAGTCTTGAGAAAGCTTTCAAAAGGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: KRIKQYSPRNLKGGS*QTNTSLEKAFKRAA Trigger: AGCAGCCCTTTTGAAAGCTTTCTCAAGACTGGTATTTGTTTGGCAGCTGCCACCTTTCAGATTCCTTGGGCTATACTGCTTAATTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR CAA 90 bp | GAGAGCGTGCACACGGCGTGGAGGCGGATCCCCTGGGCCTGCAGCTaGTCCTTGCCTCCCTGCTCCCGGTCCAACAGCACTATGGCATCA | + |
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Preference number: 2 (lower is better) Translates to: ESVHTAWRRIPWACS*SLPPCSRSNSTMAS Trigger: TGATGCCATAGTGCTGTTGGACCGGGAGCAGGGAGGCAAGGACAAGCTGCAGGCCCAGGGGATCCGCCTCCACGCCGTGTGCACGCTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR CAA 90 bp | TGCAGCAGCTCCCTGGCCTCCGACACATCGGCAGACAGACACAGATaGGTCTCCTTCTTCTGCATGAGCCGGAGCAGCTTTGAGGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: CSSSLASDTSADRHR*VSFFCMSRSSFEAS Trigger: GCTTGCCTCAAAGCTGCTCCGGCTCATGCAGAAGAAGGAGACCAATCTGTGTCTGTCTGCCGATGTGTCGGAGGCCAGGGAGCTGCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTCTTCTGTCTCACTGAACAGCAAGCCTACTCAGATATGCCTCCCAGGCAGCGGGTCCCAAGGCGTCTaGGAGCTGCAGCAGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: VSSVSLNSKPTQICLPGSGSQGV*ELQQLP Trigger: AGGGAGCTGCTGCAGCTCGCAGACGCCTTGGGACCC...GCTGCCTGGGAGGCATATCTGAGTAGGCTTGCTGTTCAGTGAGACAGAAGACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAATGACAAATTCACAGTGCTCCTCAGCCATCCCGACTGCTGCCTTGGTGTACAGGGCCCTGAGCACTaGTCTCTGAAGCCAGCGGCT | + |
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Preference number: 2 (lower is better) Translates to: ANDKFTVLLSHPDCCLGVQGPEH*SLKPAA Trigger: AGCCGCTGGCTTCAGAGACCAGTGCTCAGGGCCCTG...TACACCAAGGCAGCAGTCGGGATGGCTGAGGAGCACTGTGAATTTGTCATTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | TATGTGAATAGGGGTGTCACTGCCCATTGTGGACTGGGCTCTTCCACCTCACAGTGGAGGCGGATCCCCTaGGCCTGCAGCTTGTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: YVNRGVTAHCGLGSSTSQWRRIP*ACSLSL Trigger: CAAGGACAAGCTGCAGGCCCAGGGGATCCGCCTCCA...CTGTGAGGTGGAAGAGCCCAGTCCACAATGGGCAGTGACACCCCTATTCACATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | GCATGCGGACCACAGGGGCAACTGGTTCAAGTTTACGGGGGCTGTGAATTCCACAGAATCTCCAGCATTTaGGAGAGCGTGCACACGGCG | + |
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Preference number: 2 (lower is better) Translates to: ACGPQGQLVQVYGGCEFHRISSI*ESVHTA Trigger: CGCCGTGTGCACGCTCTCCCAAATGCTGGAGATTCT...GTGGAATTCACAGCCCCCGTAAACTTGAACCAGTTGCCCCTGTGGTCCGCATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTGAATAGGGGTGTCACTGCCCATTGTGGACTGGGCTCTTCCACCTCACAGCTGAGCACTGGTCTCTaGAGCCAGCGGCTTTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: YVNRGVTAHCGLGSSTSQLSTGL*SQRLLG Trigger: TCCCAAAAGCCGCTGGCTTCAGAGACCAGTGCTCAG...CTGTGAGGTGGAAGAGCCCAGTCCACAATGGGCAGTGACACCCCTATTCACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR GCA 90 bp | GTAAAGGCAGACCCACTTCCTGTAAGCCTTTCACAACTCCTGAGCCTGGCACGATCTTCACAGACCCTGTaGAGGGCCCTGAGCACTGGT | + |
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Preference number: 2 (lower is better) Translates to: VKADPLPVSLSQLLSLARSSQTL*RALSTG Trigger: ACCAGTGCTCAGGGCCCTGCACAGGGTCTGTGAAGA...TCGTGCCAGGCTCAGGAGTTGTGAAAGGCTTACAGGAAGTGGGTCTGCCTTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR GCA 90 bp | GGGATACCACCCATTTTCAGTGTCTTCTGTCTCACTGAACAGCAAGCCTACTCAAAGGCGTCTGCGAGCTaGAGCAGCTCCCTGGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: GIPPIFSVFCLTEQQAYSKASAS*SSSLAS Trigger: GGAGGCCAGGGAGCTGCTGCAGCTCGCAGACGCCTT...TGAGTAGGCTTGCTGTTCAGTGAGACAGAAGACACTGAAAATGGGTGGTATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAATGACAAATTCACAGTGCTCCTCAGCCATCCCGACTGCTGCCTTGGTGTATTTGAGGCAAGCGGGTaGGTTCCAGGCAGCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: ANDKFTVLLSHPDCCLGVFEASG*VPGSSA Trigger: AGCTGAGCTGCCTGGAACCCACCCGCTTGCCTCAAA...TACACCAAGGCAGCAGTCGGGATGGCTGAGGAGCACTGTGAATTTGTCATTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | AACTGGTACTGCCGTTCTCTCTTGGATACAGAGGCGGCAAGAGGAAGCTGTGCCTGGTGTAGTTTCCAGTaGCCAAGGAGCCAGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: NWYCRSLLDTEAARGSCAWCSFQ*PRSQQS Trigger: GCTCTGCTGGCTCCTTGGCCACTGGAAACTACACCA...GGCACAGCTTCCTCTTGCCGCCTCTGTATCCAAGAGAGAACGGCAGTACCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | GGTACTGCCGTTCTCTCTTGGATACAGAGGCGGCAAGAGGAAGCTGTGCCTGACACACAATGTGGGTGCTaGGAACCACATGCTGATCCT | + |
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Preference number: 2 (lower is better) Translates to: GTAVLSWIQRRQEEAVPDTQCGC*EPHADP Trigger: AGGATCAGCATGTGGTTCCCAGCACCCACATTGTGT...GTCAGGCACAGCTTCCTCTTGCCGCCTCTGTATCCAAGAGAGAACGGCAGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR CAA 90 bp | CCGGCCTACAATGATGACATCAGAACCGCGTTTCCCGATCACTTCTaGGGGACTATTGTACTGCTGGCCAAGGTGATCCCCTCCTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: PAYNDDIRTAFPDHF*GTIVLLAKVIPSCF Trigger: GAAACAGGAGGGGATCACCTTGGCCAGCAGTACAATAGTCCCCAAGAAGTGATCGGGAAACGCGGTTCTGATGTCATCATTGTAGGCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | AACTGGTACTGCCGTTCTCTCTTGGATACAGAGGCGGCAAGAGGAAGCTGTGCCACACAATGTGGGTGCTaGGAACCACATGCTGATCCT | + |
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Preference number: 2 (lower is better) Translates to: NWYCRSLLDTEAARGSCATQCGC*EPHADP Trigger: AGGATCAGCATGTGGTTCCCAGCACCCACATTGTGT...GGCACAGCTTCCTCTTGCCGCCTCTGTATCCAAGAGAGAACGGCAGTACCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | ATTAAACAAGAAAATGCCCTCACAGGAGTGTCCATAGTGCAATCTTGGCACACTCCCTGTGCAGGGCCCTaGGCACTGGTCTCTGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: IKQENALTGVSIVQSWHTPCAGP*ALVSEA Trigger: GGCTTCAGAGACCAGTGCTCAGGGCCCTGCACAGGG...AGTGTGCCAAGATTGCACTATGGACACTCCTGTGAGGGCATTTTCTTGTTTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR GCA 90 bp | GCATGCGGACCACAGGGGCAACTGGTTCAAGTTTACGGGGGCTGTGAATTCCACCTGAAAGGTGGCAGCTaGCAAACAAATACCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: ACGPQGQLVQVYGGCEFHLKGGS*QTNTSL Trigger: AAGACTGGTATTTGTTTGGCAGCTGCCACCTTTCAG...GTGGAATTCACAGCCCCCGTAAACTTGAACCAGTTGCCCCTGTGGTCCGCATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTCAGTGTCTTCTGTCTCACTGAACAGCAAGCCTACTCAGATATGCCTCCCACTGAGCACTGGTCTCTaGAGCCAGCGGCTTTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: FSVSSVSLNSKPTQICLPLSTGL*SQRLLG Trigger: TCCCAAAAGCCGCTGGCTTCAGAGACCAGTGCTCAG...TGGGAGGCATATCTGAGTAGGCTTGCTGTTCAGTGAGACAGAAGACACTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAGCGGGTGGGTTCCAGGCAGCTCAGCTCGAGCACCAAAGCTGAGTTCTTTGAACATTAGATGTGTGTaGCTAAGTCACACTGGAACT | + |
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Preference number: 2 (lower is better) Translates to: ASGWVPGSSARAPKLSSLNIRCV*LSHTGT Trigger: AGTTCCAGTGTGACTTAGTCACACACATCTAATGTT...CAAAGAACTCAGCTTTGGTGCTCGAGCTGAGCTGCCTGGAACCCACCCGCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR GCA 90 bp | AGAATTAAGCAGTATAGCCCAAGGAATCTGAAAGGTGGCAGCTGCCAAACAAATCCTGCAGCTTGTCCTTaGCTCCCTGCTCCCGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: RIKQYSPRNLKGGSCQTNPAACP*LPAPGP Trigger: TGGACCGGGAGCAGGGAGGCAAGGACAAGCTGCAGG...ATTTGTTTGGCAGCTGCCACCTTTCAGATTCCTTGGGCTATACTGCTTAATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAATGGGTGGAATAGTAAGTCGTCCTCAAGAGGACTTTGTTTCCTATTTCCCCGGATCCCCTGGGCCTaGAGCTTGTCCTTGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: FNGWNSKSSSRGLCFLFPRIPWA*SLSLPP Trigger: GGGAGGCAAGGACAAGCTGCAGGCCCAGGGGATCCG...GGGAAATAGGAAACAAAGTCCTCTTGAGGACGACTTACTATTCCACCCATTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAGTGCTAAAGGATCTTTCCTTTTGGCAGGAATAAGACTTAAGGTACCACTGCAGGGCCCTGAGCACTaGTCTCTGAAGCCAGCGGCT | + |
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Preference number: 2 (lower is better) Translates to: VSAKGSFLLAGIRLKVPLQGPEH*SLKPAA Trigger: AGCCGCTGGCTTCAGAGACCAGTGCTCAGGGCCCTG...CAGTGGTACCTTAAGTCTTATTCCTGCCAAAAGGAAAGATCCTTTAGCACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | GCGGTTAGCCGCTGCAAGTATTCCCCGGCCTACAATGATGACATCAGAACCGCGCAAGTGAAGAAACTCTaGTTTCATGCTTACTCGGGA | + |
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Preference number: 2 (lower is better) Translates to: AVSRCKYSPAYNDDIRTAQVKKL*FHAYSG Trigger: TCCCGAGTAAGCATGAAACCAGAGTTTCTTCACTTG...CGCGGTTCTGATGTCATCATTGTAGGCCGGGGAATACTTGCAGCGGCTAACCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR GCA 90 bp | TATGTGAATAGGGGTGTCACTGCCCATTGTGGACTGGGCTCTTCCACCTCACAGTCGATCTTTTCCTGCTaGTGGAGAATCTCCAGCATT | + |
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Preference number: 2 (lower is better) Translates to: YVNRGVTAHCGLGSSTSQSIFSC*WRISSI Trigger: AATGCTGGAGATTCTCCAGCAGCAGGAAAAGATCGA...CTGTGAGGTGGAAGAGCCCAGTCCACAATGGGCAGTGACACCCCTATTCACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTACTACAGGATGCACCATTACTTGCTGAGTGTATGCAGTTGCTAATCTTAGCTGCAGCAGCTCCCTaGCCTCCGACACATCGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: TLLQDAPLLAECMQLLILAAAAP*PPTHRQ Trigger: CTGCCGATGTGTCGGAGGCCAGGGAGCTGCTGCAGC...TAAGATTAGCAACTGCATACACTCAGCAAGTAATGGTGCATCCTGTAGTAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGGGTGGAATAGTAAGTCGTCCTCAAGAGGACTTTGTTTCCTATTTCCCCAATCTTCACAGACCCTGTaGAGGGCCCTGAGCACTGGT | + |
|
Preference number: 2 (lower is better) Translates to: NGWNSKSSSRGLCFLFPQSSQTL*RALSTG Trigger: ACCAGTGCTCAGGGCCCTGCACAGGGTCTGTGAAGA...TTGGGGAAATAGGAAACAAAGTCCTCTTGAGGACGACTTACTATTCCACCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCACCTGAGGCTCATGCCTTGTTATGCTTTTACTCGATGGGACCATGCTGCACTGAAAGGTGGCAGCTaGCAAACAAATACCAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: THLRLMPCYAFTRWDHAALKGGS*QTNTSL Trigger: AAGACTGGTATTTGTTTGGCAGCTGCCACCTTTCAG...TGCAGCATGGTCCCATCGAGTAAAAGCATAACAAGGCATGAGCCTCAGGTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTAAACAAGAAAATGCCCTCACAGGAGTGTCCATAGTGCAATCTTGGCACACTTTGTCCTTGCCTCCCTaGTCCCGGTCCAACAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: IKQENALTGVSIVQSWHTLSLPP*SRSNST Trigger: AGTGCTGTTGGACCGGGAGCAGGGAGGCAAGGACAA...AGTGTGCCAAGATTGCACTATGGACACTCCTGTGAGGGCATTTTCTTGTTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTTCCTAAAAGCCTGCTCTAAAGAGCGTGTGTGTGCACTTAACTTCAGGGTCGAAGCCAGCGGCTTTTaGGATACCACCCATTTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: WFLKACSKERVCALNFRVEASGF*DTTHFQ Trigger: CTGAAAATGGGTGGTATCCCAAAAGCCGCTGGCTTC...GACCCTGAAGTTAAGTGCACACACACGCTCTTTAGAGCAGGCTTTTAGGAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTGAATAGGGGTGTCACTGCCCATTGTGGACTGGGCTCTTCCACCTCACAGTTACAAGTTAGACCATaGTACAATGCTGCAGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: YVNRGVTAHCGLGSSTSQLQVRP*YNAAES Trigger: AGACTCTGCAGCATTGTATCATGGTCTAACTTGTAA...CTGTGAGGTGGAAGAGCCCAGTCCACAATGGGCAGTGACACCCCTATTCACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTTACTACAGGATGCACCATTACTTGCTGAGTGTATGCAGTTGCTAATCTTAGCCTTTCACAACTCCTaGGCCTGGCACGACGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: TLLQDAPLLAECMQLLILAFHNS*AWHDVS Trigger: GCTCACGTCGTGCCAGGCTCAGGAGTTGTGAAAGGC...TAAGATTAGCAACTGCATACACTCAGCAAGTAATGGTGCATCCTGTAGTAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAAAGCCTGCTCTAAAGAGCGTGTGTGTGCACTTAACTTCAGGGTCTCAGTTACCACTGATGATGTGTaGAGGGCAGAAACTAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LKACSKERVCALNFRVSVTTDDV*RAETRV Trigger: CACCCTAGTTTCTGCCCTCCACACATCATCAGTGGT...AACTGAGACCCTGAAGTTAAGTGCACACACACGCTCTTTAGAGCAGGCTTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR-3UTR CCA 90 bp | CTAAAAGCCTGCTCTAAAGAGCGTGTGTGTGCACTTAACTTCAGGGTCTCAGTTTGGACCTTGGACTCCTaGAACCACATAGCTGTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LKACSKERVCALNFRVSVWTLDS*NHIAVG Trigger: TCCAACAGCTATGTGGTTCCAGGAGTCCAAGGTCCA...AACTGAGACCCTGAAGTTAAGTGCACACACACGCTCTTTAGAGCAGGCTTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | CCACCTCACAGGATTATTAAACAAGAAAATGCCCTCACAGGAGTGTCCATAGTGAGTGCTCTTAACCACTaGGCCATTCACTATGAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: PPHRIIKQENALTGVSIVSALNH*AIHYEP Trigger: GGGCTCATAGTGAATGGCTCAGTGGTTAAGAGCACT...CACTATGGACACTCCTGTGAGGGCATTTTCTTGTTTAATAATCCTGTGAGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTTCCTAAAAGCCTGCTCTAAAGAGCGTGTGTGTGCACTTAACTTCAGGGTCGAGAAAACGTTCTCCTaGATGAACCTCTTCACTCTC | + |
|
Preference number: 2 (lower is better) Translates to: WFLKACSKERVCALNFRVEKTFS*MNLFTL Trigger: GAGAGTGAAGAGGTTCATTCAGGAGAACGTTTTCTC...GACCCTGAAGTTAAGTGCACACACACGCTCTTTAGAGCAGGCTTTTAGGAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTGGCGCTCACCAGTTATCTCAAGTCTAGACTATTTACATACAGCTGTCTGTGAGACACAATGTGGGTaGTGGGAACCACATGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: VWRSPVISSLDYLHTAVCETQCG*WEPHAD Trigger: ATCAGCATGTGGTTCCCAGCACCCACATTGTGTCTC...ACAGACAGCTGTATGTAAATAGTCTAGACTTGAGATAACTGGTGAGCGCCAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR GCA 90 bp | ATTAAACAAGAAAATGCCCTCACAGGAGTGTCCATAGTGCAATCTTGGCACACTGCGTCGATCTTTTCCTaGTGCTGGAGAATCTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: IKQENALTGVSIVQSWHTASIFS*CWRISS Trigger: GCTGGAGATTCTCCAGCAGCAGGAAAAGATCGACGC...AGTGTGCCAAGATTGCACTATGGACACTCCTGTGAGGGCATTTTCTTGTTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAAAGCCTGCTCTAAAGAGCGTGTGTGTGCACTTAACTTCAGGGTCTCAGTTCCATGCCCAGCCATCTaGAAAAGCAGACAGCATTTA | + |
|
Preference number: 2 (lower is better) Translates to: LKACSKERVCALNFRVSVPCPAI*KSRQHL Trigger: TAAATGCTGTCTGCTTTTCCAGATGGCTGGGCATGG...AACTGAGACCCTGAAGTTAAGTGCACACACACGCTCTTTAGAGCAGGCTTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | GGGATACCACCCATTTTCAGTGTCTTCTGTCTCACTGAACAGCAAGCCTACTCAATCTTTTCCTGCTGCTaGAGAATCTCCAGCATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: GIPPIFSVFCLTEQQAYSIFSCC*RISSIW Trigger: CCAAATGCTGGAGATTCTCCAGCAGCAGGAAAAGAT...TGAGTAGGCTTGCTGTTCAGTGAGACAGAAGACACTGAAAATGGGTGGTATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR CAA 90 bp | TATAAGAGGAAACTGGATCCCCTGGAATTGGAGTTACAGATGGTTTaGAGACACAATGTGGGTGCTGGGAACCACATGCTGATCCTACAT | + |
|
Preference number: 2 (lower is better) Translates to: YKRKLDPLELELQMV*RHNVGAGNHMLILH Trigger: ATGTAGGATCAGCATGTGGTTCCCAGCACCCACATTGTGTCTCAAAACCATCTGTAACTCCAATTCCAGGGGATCCAGTTTCCTCTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | TACATACTCTCAGACCATTCTGTCTGGCGCTCACCAGTTATCTCAAGTCTAGACTTAGCAAACACACAATaGCAGTGGGGAACTGGTACT | + |
|
Preference number: 2 (lower is better) Translates to: YILSDHSVWRSPVISSLDLANTQ*QWGTGT Trigger: AGTACCAGTTCCCCACTGTCATTGTGTGTTTGCTAA...GTCTAGACTTGAGATAACTGGTGAGCGCCAGACAGAATGGTCTGAGAGTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAAAGCCTGCTCTAAAGAGCGTGTGTGTGCACTTAACTTCAGGGTCTCAGTTTTAGCAAACACACAATaGCAGTGGGGAACTGGTACT | + |
|
Preference number: 2 (lower is better) Translates to: LKACSKERVCALNFRVSVLANTQ*QWGTGT Trigger: AGTACCAGTTCCCCACTGTCATTGTGTGTTTGCTAA...AACTGAGACCCTGAAGTTAAGTGCACACACACGCTCTTTAGAGCAGGCTTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | AATGGGTGGAATAGTAAGTCGTCCTCAAGAGGACTTTGTTTCCTATTTCCCCAAAGCTCATTTCTGCAATaGGCAGGCAGGCTCGATGTA | + |
|
Preference number: 2 (lower is better) Translates to: NGWNSKSSSRGLCFLFPQSSFLQ*AGRLDV Trigger: TACATCGAGCCTGCCTGCTCATTGCAGAAATGAGCT...TTGGGGAAATAGGAAACAAAGTCCTCTTGAGGACGACTTACTATTCCACCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | AGAATTAAGCAGTATAGCCCAAGGAATCTGAAAGGTGGCAGCTGCCAAACAAATGAAGCCAGCGGCTTTTaGGATACCACCCATTTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: RIKQYSPRNLKGGSCQTNEASGF*DTTHFQ Trigger: CTGAAAATGGGTGGTATCCCAAAAGCCGCTGGCTTC...ATTTGTTTGGCAGCTGCCACCTTTCAGATTCCTTGGGCTATACTGCTTAATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | ATTAAACAAGAAAATGCCCTCACAGGAGTGTCCATAGTGCAATCTTGGCACACTACCACTGATGATGTGTaGAGGGCAGAAACTAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: IKQENALTGVSIVQSWHTTTDDV*RAETRV Trigger: CACCCTAGTTTCTGCCCTCCACACATCATCAGTGGT...AGTGTGCCAAGATTGCACTATGGACACTCCTGTGAGGGCATTTTCTTGTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCACCTGAGGCTCATGCCTTGTTATGCTTTTACTCGATGGGACCATGCTGCATTTGATGAACTGATTTaGCCAAGGGTACTGTTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: THLRLMPCYAFTRWDHAAFDELI*PRVLLL Trigger: TAACAACAGTACCCTTGGCCAAATCAGTTCATCAAA...TGCAGCATGGTCCCATCGAGTAAAAGCATAACAAGGCATGAGCCTCAGGTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTACTACAGGATGCACCATTACTTGCTGAGTGTATGCAGTTGCTAATCTTATGTCACTGCCCATTGTaGACTGGGCTCTTCCACCTC | + |
|
Preference number: 2 (lower is better) Translates to: TLLQDAPLLAECMQLLILCHCPL*TGLFHL Trigger: GAGGTGGAAGAGCCCAGTCCACAATGGGCAGTGACA...TAAGATTAGCAACTGCATACACTCAGCAAGTAATGGTGCATCCTGTAGTAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | AGAATTAAGCAGTATAGCCCAAGGAATCTGAAAGGTGGCAGCTGCCAAACAAATAAACGTTCTCCTGAATaGACCTCTTCACTCTCCCGA | + |
|
Preference number: 2 (lower is better) Translates to: RIKQYSPRNLKGGSCQTNKRSPE*TSSLSR Trigger: TCGGGAGAGTGAAGAGGTTCATTCAGGAGAACGTTT...ATTTGTTTGGCAGCTGCCACCTTTCAGATTCCTTGGGCTATACTGCTTAATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTCAGTGTCTTCTGTCTCACTGAACAGCAAGCCTACTCAGATATGCCTCCCATTCAGAATGTCGACATaGGTTTTGAGCATGCAGATG | + |
|
Preference number: 2 (lower is better) Translates to: FSVSSVSLNSKPTQICLPFRMST*VLSMQM Trigger: CATCTGCATGCTCAAAACTCATGTCGACATTCTGAA...TGGGAGGCATATCTGAGTAGGCTTGCTGTTCAGTGAGACAGAAGACACTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | ATTAAACAAGAAAATGCCCTCACAGGAGTGTCCATAGTGCAATCTTGGCACACTACTCCTGGGGTCAAGTaGAGAAACTCTGGTTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: IKQENALTGVSIVQSWHTTPGVK*RNSGFM Trigger: CATGAAACCAGAGTTTCTTCACTTGACCCCAGGAGT...AGTGTGCCAAGATTGCACTATGGACACTCCTGTGAGGGCATTTTCTTGTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR GCA 90 bp | AATGGGTGGAATAGTAAGTCGTCCTCAAGAGGACTTTGTTTCCTATTTCCCCAAGCTCATGCCTTGTTATaGTTTTACTCGATGGGACCA | + |
|
Preference number: 2 (lower is better) Translates to: NGWNSKSSSRGLCFLFPQAHALL*FYSMGP Trigger: TGGTCCCATCGAGTAAAAGCATAACAAGGCATGAGC...TTGGGGAAATAGGAAACAAAGTCCTCTTGAGGACGACTTACTATTCCACCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR GCA 90 bp | ATGACTAAGCTAAAGCCTAGAAGGGAAGTTCCATTAGCTCCTGACAGCTTTTCTGCTCATGCCTTGTTATaGTTTTACTCGATGGGACCA | + |
|
Preference number: 2 (lower is better) Translates to: MTKLKPRREVPLAPDSFSAHALL*FYSMGP Trigger: TGGTCCCATCGAGTAAAAGCATAACAAGGCATGAGC...AGAAAAGCTGTCAGGAGCTAATGGAACTTCCCTTCTAGGCTTTAGCTTAGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR GCA 90 bp | AGAATTAAGCAGTATAGCCCAAGGAATCTGAAAGGTGGCAGCTGCCAAACAAATGAAACTCTGGTTTCATaGTTACTCGGGAGCCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RIKQYSPRNLKGGSCQTNETLVS*LLGSQK Trigger: TTTCTGGCTCCCGAGTAAGCATGAAACCAGAGTTTC...ATTTGTTTGGCAGCTGCCACCTTTCAGATTCCTTGGGCTATACTGCTTAATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAATGGGTGGAATAGTAAGTCGTCCTCAAGAGGACTTTGTTTCCTATTTCCCGGAAACTGGATCCCCTaGAATTGGAGTTACAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: FNGWNSKSSSRGLCFLFPGNWIP*NWSYRW Trigger: CCATCTGTAACTCCAATTCCAGGGGATCCAGTTTCC...GGGAAATAGGAAACAAAGTCCTCTTGAGGACGACTTACTATTCCACCCATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR CAA 90 bp | ACTATTTACATACAGCTGTCTGTGAGTGCTAAAGGATCTTTCCTTTaGGCAGGAATAAGACTTAAGGTACCACTGATGATGTGTGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: TIYIQLSVSAKGSFL*AGIRLKVPLMMCGG Trigger: CCCTCCACACATCATCAGTGGTACCTTAAGTCTTATTCCTGCCAAAAGGAAAGATCCTTTAGCACTCACAGACAGCTGTATGTAAATAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | ATGACTAAGCTAAAGCCTAGAAGGGAAGTTCCATTAGCTCCTGACAGCTTTTCTTGCACCATTACTTGCTaGGTGTATGCAGTTGCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: MTKLKPRREVPLAPDSFSCTITC*VYAVAN Trigger: ATTAGCAACTGCATACACTCAGCAAGTAATGGTGCA...AGAAAAGCTGTCAGGAGCTAATGGAACTTCCCTTCTAGGCTTTAGCTTAGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | ATGACTAAGCTAAAGCCTAGAAGGGAAGTTCCATTAGCTCCTGACAGCTTTTCTCACTATATCTGCCCATaGAGCTATTTTAAAGGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: MTKLKPRREVPLAPDSFSHYICP*SYFKGA Trigger: GGCACCTTTAAAATAGCTTCATGGGCAGATATAGTG...AGAAAAGCTGTCAGGAGCTAATGGAACTTCCCTTCTAGGCTTTAGCTTAGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAGTGCTAAAGGATCTTTCCTTTTGGCAGGAATAAGACTTAAGGTACCACTGAAGGAATCTGAAAGGTaGCAGCTGCCAAACAAATAC | + |
|
Preference number: 2 (lower is better) Translates to: VSAKGSFLLAGIRLKVPLKESER*QLPNKY Trigger: GTATTTGTTTGGCAGCTGCCACCTTTCAGATTCCTT...CAGTGGTACCTTAAGTCTTATTCCTGCCAAAAGGAAAGATCCTTTAGCACTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | CATTCTGTCTGGCGCTCACCAGTTATCTCAAGTCTAGACTATTTACATACAGCTTTACAAGTTAGACCATaGTACAATGCTGCAGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: HSVWRSPVISSLDYLHTALQVRP*YNAAES Trigger: AGACTCTGCAGCATTGTATCATGGTCTAACTTGTAA...AGCTGTATGTAAATAGTCTAGACTTGAGATAACTGGTGAGCGCCAGACAGAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | CATTCTGTCTGGCGCTCACCAGTTATCTCAAGTCTAGACTATTTACATACAGCTAACAAATACCAGTCTTaGGAAAGCTTTCAAAAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: HSVWRSPVISSLDYLHTANKYQS*ESFQKG Trigger: GCCCTTTTGAAAGCTTTCTCAAGACTGGTATTTGTT...AGCTGTATGTAAATAGTCTAGACTTGAGATAACTGGTGAGCGCCAGACAGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCCACCTCACAGGATTATTAAACAAGAAAATGCCCTCACAGGAGTGTCCATAAACAAATACCAGTCTTaGGAAAGCTTTCAAAAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LPPHRIIKQENALTGVSINKYQS*ESFQKG Trigger: GCCCTTTTGAAAGCTTTCTCAAGACTGGTATTTGTT...TATGGACACTCCTGTGAGGGCATTTTCTTGTTTAATAATCCTGTGAGGTGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAGTGCTAAAGGATCTTTCCTTTTGGCAGGAATAAGACTTAAGGTACCACTGAACATTAGATGTGTGTaGCTAAGTCACACTGGAACT | + |
|
Preference number: 2 (lower is better) Translates to: VSAKGSFLLAGIRLKVPLNIRCV*LSHTGT Trigger: AGTTCCAGTGTGACTTAGTCACACACATCTAATGTT...CAGTGGTACCTTAAGTCTTATTCCTGCCAAAAGGAAAGATCCTTTAGCACTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR-3UTR TCA 90 bp | AAACTGCCATGCCCAGCCATCTGGAAAAGCAGACAGCATTTAACATTATTTTTGGTTATGATTAGCTGCTaGGAAAACGTTCTCCTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: KLPCPAIWKSRQHLTLFLVMISC*ENVLLN Trigger: ATTCAGGAGAACGTTTTCTCAGCAGCTAATCATAAC...CAAAAATAATGTTAAATGCTGTCTGCTTTTCCAGATGGCTGGGCATGGCAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTAAACAAGAAAATGCCCTCACAGGAGTGTCCATAGTGCAATCTTGGCACACTTTTGATGAACTGATTTaGCCAAGGGTACTGTTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: IKQENALTGVSIVQSWHTFDELI*PRVLLL Trigger: TAACAACAGTACCCTTGGCCAAATCAGTTCATCAAA...AGTGTGCCAAGATTGCACTATGGACACTCCTGTGAGGGCATTTTCTTGTTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTGTCTGGCGCTCACCAGTTATCTCAAGTCTAGACTATTTACATACAGCTGGAGCATCTTATTTATaGAGTAAACATTGGAGACAT | + |
|
Preference number: 2 (lower is better) Translates to: HSVWRSPVISSLDYLHTAGASYL*SKHWRH Trigger: ATGTCTCCAATGTTTACTCCATAAATAAGATGCTCC...AGCTGTATGTAAATAGTCTAGACTTGAGATAACTGGTGAGCGCCAGACAGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR GCA 72 bp | CCTGCTGCTGGAGAATCTCCAGCATTTGGGAGAGCGTaGACACGGCGTGGAGGCGGATCCCCTGGGCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PAAGESPAFGRA*TRRGGGSPGPA Trigger: TGCAGGCCCAGGGGATCCGCCTCCACGCCGTGTGCACGCTCTCCCAAATGCTGGAGATTCTCCAGCAGCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR CCA 72 bp | TGGGTCCCAAGGCGTCTGCGAGCTGCAGCAGCTCCCTaGCCTCCGACACATCGGCAGACAGACACAGATTGG | + |
|
Preference number: 3 (lower is better) Translates to: WVPRRLRAAAAP*PPTHRQTDTDW Trigger: CCAATCTGTGTCTGTCTGCCGATGTGTCGGAGGCCAGGGAGCTGCTGCAGCTCGCAGACGCCTTGGGACCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR CCA 72 bp | AGAATCTCCAGCATTTGGGAGAGCGTGCACACGGCGTaGAGGCGGATCCCCTGGGCCTGCAGCTTGTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: RISSIWESVHTA*RRIPWACSLSL Trigger: CAAGGACAAGCTGCAGGCCCAGGGGATCCGCCTCCACGCCGTGTGCACGCTCTCCCAAATGCTGGAGATTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR TCA 72 bp | ATTGGTCTCCTTCTTCTGCATGAGCCGGAGCAGCTTTaGGGCAAGCGGGTGGGTTCCAGGCAGCTCAGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: IGLLLLHEPEQL*GKRVGSRQLSS Trigger: CGAGCTGAGCTGCCTGGAACCCACCCGCTTGCCTCAAAGCTGCTCCGGCTCATGCAGAAGAAGGAGACCAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR CCA 72 bp | ATTCACAGTGCTCCTCAGCCATCCCGACTGCTGCCTTaGTGTAGTTTCCAGTGGCCAAGGAGCCAGCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: IHSAPQPSRLLP*CSFQWPRSQQS Trigger: GCTCTGCTGGCTCCTTGGCCACTGGAAACTACACCAAGGCAGCAGTCGGGATGGCTGAGGAGCACTGTGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR GCA 72 bp | GATGTGTGGAGGGCAGAAACTAGGGTGGTGGTGCTTTaGTCAGTAAGCATGCGGACCACAGGGGCAACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: DVWRAETRVVVL*SVSMRTTGATG Trigger: ACCAGTTGCCCCTGTGGTCCGCATGCTTACTGAGCAAAGCACCACCACCCTAGTTTCTGCCCTCCACACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR GCA 72 bp | GACAAATTCACAGTGCTCCTCAGCCATCCCGACTGCTaGCTTGGTGTAGTTTCCAGTGGCCAAGGAGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: DKFTVLLSHPDC*LGVVSSGQGAS Trigger: GCTGGCTCCTTGGCCACTGGAAACTACACCAAGGCAGCAGTCGGGATGGCTGAGGAGCACTGTGAATTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR CCA 72 bp | CTCCCGACCATGTCAGCGTCGATCTTTTCCTGCTGCTaGAGAATCTCCAGCATTTGGGAGAGCGTGCACACG | + |
|
Preference number: 3 (lower is better) Translates to: LPTMSASIFSCC*RISSIWESVHT Trigger: CGTGTGCACGCTCTCCCAAATGCTGGAGATTCTCCAGCAGCAGGAAAAGATCGACGCTGACATGGTCGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR TCA 72 bp | CAGTGGCCAAGGAGCCAGCAGAGCTCATTTCTGCAATaGGCAGGCAGGCTCGATGTAAAGGCAGACCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: QWPRSQQSSFLQ*AGRLDVKADPL Trigger: AAGTGGGTCTGCCTTTACATCGAGCCTGCCTGCTCATTGCAGAAATGAGCTCTGCTGGCTCCTTGGCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR GCA 72 bp | ACTCTCCCGACCATGTCAGCGTCGATCTTTTCCTGCTaGTGGAGAATCTCCAGCATTTGGGAGAGCGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: TLPTMSASIFSC*WRISSIWESVH Trigger: GTGCACGCTCTCCCAAATGCTGGAGATTCTCCAGCAGCAGGAAAAGATCGACGCTGACATGGTCGGGAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR CCA 72 bp | CACCTGAGGCTCATGCCTTGTTATGCTTTTACTCGATaGGACCATGCTGCAGTCGGACTCCTTCAAGCACGT | + |
|
Preference number: 3 (lower is better) Translates to: HLRLMPCYAFTR*DHAAVGLLQAR Trigger: ACGTGCTTGAAGGAGTCCGACTGCAGCATGGTCCCATCGAGTAAAAGCATAACAAGGCATGAGCCTCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCAATGACAAATTCACAGTGCTCCTCAGCCATCCCGACTGCTGCCTTGGTGTACTGGATCCCCTGGAATaGGAGTTACAGATGGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: ANDKFTVLLSHPDCCLGVLDPLE*ELQMVL Trigger: CAAAACCATCTGTAACTCCAATTCCAGGGGATCCAG...TACACCAAGGCAGCAGTCGGGATGGCTGAGGAGCACTGTGAATTTGTCATTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAAAGGCAGACCCACTTCCTGTAAGCCTTTCACAACTCCTGAGCCTGGCACGACCAAAGCTGAGTTCTTaGCACGCTTTCTTCTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VKADPLPVSLSQLLSLARPKLSS*HAFFSG Trigger: TCCTGAGAAGAAAGCGTGCAAAGAACTCAGCTTTGG...TCGTGCCAGGCTCAGGAGTTGTGAAAGGCTTACAGGAAGTGGGTCTGCCTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR CCA 72 bp | GAAAATGCCCTCACAGGAGTGTCCATAGTGCAATCTTaGCACACTGATGGACCGCCAAAGAGGAACTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ENALTGVSIVQS*HTDGPPKRNSG Trigger: TCCTGAGTTCCTCTTTGGCGGTCCATCAGTGTGCCAAGATTGCACTATGGACACTCCTGTGAGGGCATTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGCGGGTGGGTTCCAGGCAGCTCAGCTCGAGCACCAAAGCTGAGTTCTTTGAAACAAATACCAGTCTaGAGAAAGCTTTCAAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ASGWVPGSSARAPKLSSLKQIPV*RKLSKG Trigger: CCCTTTTGAAAGCTTTCTCAAGACTGGTATTTGTTT...CAAAGAACTCAGCTTTGGTGCTCGAGCTGAGCTGCCTGGAACCCACCCGCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR TCA 72 bp | TGGGATACCACCCATTTTCAGTGTCTTCTGTCTCACTaGACAGCAAGCCTACTCAGATATGCCTCCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WDTTHFQCLLSH*TASLLRYASQA Trigger: TGCCTGGGAGGCATATCTGAGTAGGCTTGCTGTTCAGTGAGACAGAAGACACTGAAAATGGGTGGTATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR GCA 72 bp | ATTAGCTCAAACCCACCTGAGGCTCATGCCTTGTTATaGTTTTACTCGATGGGACCATGCTGCAGTCGGACT | + |
|
Preference number: 3 (lower is better) Translates to: ISSNPPEAHALL*FYSMGPCCSRT Trigger: AGTCCGACTGCAGCATGGTCCCATCGAGTAAAAGCATAACAAGGCATGAGCCTCAGGTGGGTTTGAGCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR CCA 72 bp | TCAGGGTCTCAGTTTAGGTCTGCATCTTACAACTCCTaGACCTTGGACTCCTGGAACCACATAGCTGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SGSQFRSASYNS*TLDSWNHIAVG Trigger: TCCAACAGCTATGTGGTTCCAGGAGTCCAAGGTCCAGGAGTTGTAAGATGCAGACCTAAACTGAGACCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTAAACAAGAAAATGCCCTCACAGGAGTGTCCATAGTGCAATCTTGGCACACTTACAACTCCTGGACCTaGGACTCCTGGAACCACATA | + |
|
Preference number: 3 (lower is better) Translates to: IKQENALTGVSIVQSWHTYNSWT*DSWNHI Trigger: TATGTGGTTCCAGGAGTCCAAGGTCCAGGAGTTGTA...AGTGTGCCAAGATTGCACTATGGACACTCCTGTGAGGGCATTTTCTTGTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAAAAGCCTGCTCTAAAGAGCGTGTGTGTGCACTTAACTTCAGGGTCTCAGTTTGGCCAAGGGTACTGTaGTTAGTTTTAATGGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LKACSKERVCALNFRVSVWPRVL*LVLMGG Trigger: TCCACCCATTAAAACTAACAACAGTACCCTTGGCCA...AACTGAGACCCTGAAGTTAAGTGCACACACACGCTCTTTAGAGCAGGCTTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR TCA 72 bp | CAGTCGGACTCCTTCAAGCACGTGCTATTGCTACTTTaGTTCCACTTTACTACAGGATGCACCATTACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: QSDSFKHVLLLL*FHFTTGCTITC Trigger: GCAAGTAATGGTGCATCCTGTAGTAAAGTGGAATCAAAGTAGCAATAGCACGTGCTTGAAGGAGTCCGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR TCA 72 bp | ATCACATCCAGAGTAAAATCATTCAGAATGTCGACATaGGTTTTGAGCATGCAGATGCTGGGTCCCAAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: ITSRVKSFRMST*VLSMQMLGPKA Trigger: CGCCTTGGGACCCAGCATCTGCATGCTCAAAACTCATGTCGACATTCTGAATGATTTTACTCTGGATGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR TCA 72 bp | GCCTGGCACGACGTGAGCATTCACTATATCTGCCCATaGAGCTATTTTAAAGGTGCCACTTTCATACTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: AWHDVSIHYICP*SYFKGATFILL Trigger: AAGCAGTATGAAAGTGGCACCTTTAAAATAGCTTCATGGGCAGATATAGTGAATGCTCACGTCGTGCCAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR CCA 72 bp | TCAGCGAATTTCCTGTCTTCAAATATTAAGAACTCGTaGCGTTTTGCCAGGGCTGTCAACTCCTCCATCACA | + |
|
Preference number: 3 (lower is better) Translates to: SANFLSSNIKNS*RFARAVNSSIT Trigger: TGTGATGGAGGAGTTGACAGCCCTGGCAAAACGCCACGAGTTCTTAATATTTGAAGACAGGAAATTCGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACTGCCATGCCCAGCCATCTGGAAAAGCAGACAGCATTTAACATTATTTTTGGCAGACAGACACAGATaGGTCTCCTTCTTCTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: KLPCPAIWKSRQHLTLFLADRHR*VSFFCM Trigger: CATGCAGAAGAAGGAGACCAATCTGTGTCTGTCTGC...CAAAAATAATGTTAAATGCTGTCTGCTTTTCCAGATGGCTGGGCATGGCAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| 3UTR TCA 72 bp | TCTGAAAGGTGGCAGCTGCCAAACAAATACCAGTCTTaGGAAAGCTTTCAAAAGGGCTGCTCATTACAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: SERWQLPNKYQS*ESFQKGCSLQY Trigger: GTACTGTAATGAGCAGCCCTTTTGAAAGCTTTCTCAAGACTGGTATTTGTTTGGCAGCTGCCACCTTTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAAAAGCCTGCTCTAAAGAGCGTGTGTGTGCACTTAACTTCAGGGTCTCAGTTAATGCATTTTTCCTTTaGGTTCCTAAAAGCCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LKACSKERVCALNFRVSVNAFFL*VPKSLL Trigger: GAGCAGGCTTTTAGGAACCAAAAGGAAAAATGCATT...AACTGAGACCCTGAAGTTAAGTGCACACACACGCTCTTTAGAGCAGGCTTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR GCA 72 bp | AAGCAGTATAGCCCAAGGAATCTGAAAGGTGGCAGCTaGCAAACAAATACCAGTCTTGAGAAAGCTTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: KQYSPRNLKGGS*QTNTSLEKAFK Trigger: TTTGAAAGCTTTCTCAAGACTGGTATTTGTTTGGCAGCTGCCACCTTTCAGATTCCTTGGGCTATACTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR CCA 72 bp | AAGTTAGCAGGCTACATACTCTCAGACCATTCTGTCTaGCGCTCACCAGTTATCTCAAGTCTAGACTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: KLAGYILSDHSV*RSPVISSLDYL Trigger: TAAATAGTCTAGACTTGAGATAACTGGTGAGCGCCAGACAGAATGGTCTGAGAGTATGTAGCCTGCTAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTACTACAGGATGCACCATTACTTGCTGAGTGTATGCAGTTGCTAATCTTACTGGATCCCCTGGAATaGGAGTTACAGATGGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TLLQDAPLLAECMQLLILLDPLE*ELQMVL Trigger: CAAAACCATCTGTAACTCCAATTCCAGGGGATCCAG...TAAGATTAGCAACTGCATACACTCAGCAAGTAATGGTGCATCCTGTAGTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR TCA 72 bp | GAACTAAAAGAATTAAGCAGTATAGCCCAAGGAATCTaGAAGGTGGCAGCTGCCAAACAAATACCAGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ELKELSSIAQGI*KVAAAKQIPVL Trigger: CAAGACTGGTATTTGTTTGGCAGCTGCCACCTTTCAGATTCCTTGGGCTATACTGCTTAATTCTTTTAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR CCA 72 bp | GATTTGGCCAAGGGTACTGTTGTTAGTTTTAATGGGTaGAATAGTAAGTCGTCCTCAAGAGGACTTTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: DLAKGTVVSFNG*NSKSSSRGLCF Trigger: GAAACAAAGTCCTCTTGAGGACGACTTACTATTCCACCCATTAAAACTAACAACAGTACCCTTGGCCAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTGGCGCTCACCAGTTATCTCAAGTCTAGACTATTTACATACAGCTGTCTGTAAACAAATACCAGTCTaGAGAAAGCTTTCAAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VWRSPVISSLDYLHTAVCKQIPV*RKLSKG Trigger: CCCTTTTGAAAGCTTTCTCAAGACTGGTATTTGTTT...ACAGACAGCTGTATGTAAATAGTCTAGACTTGAGATAACTGGTGAGCGCCAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTAAACAAGAAAATGCCCTCACAGGAGTGTCCATAGTGCAATCTTGGCACACTAAAGGATCTTTCCTTTaGGCAGGAATAAGACTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: IKQENALTGVSIVQSWHTKGSFL*AGIRLK Trigger: CTTAAGTCTTATTCCTGCCAAAAGGAAAGATCCTTT...AGTGTGCCAAGATTGCACTATGGACACTCCTGTGAGGGCATTTTCTTGTTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR GCA 72 bp | GAAAGCTTTCAAAAGGGCTGCTCATTACAGTACCAATaGAGTGATTACAAGTTAGACCATGATACAATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ESFQKGCSLQYQ*SDYKLDHDTML Trigger: CAGCATTGTATCATGGTCTAACTTGTAATCACTGCATTGGTACTGTAATGAGCAGCCCTTTTGAAAGCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR TCA 72 bp | GATCACACTGTAGGAGGCACCCAATTTCTCAGTCTGTaGGCAAATATTTCTGTACTAAAATTTTCCCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: DHTVGGTQFLSL*ANISVLKFSLL Trigger: TAAGAGGGAAAATTTTAGTACAGAAATATTTGCTCACAGACTGAGAAATTGGGTGCCTCCTACAGTGTGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| 3UTR TCA 72 bp | AGAGGACTTTGTTTCCTATTTCCCCAAATACTGATCTaGGTTAACAGTGTAGAACTTAATGCATTTTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RGLCFLFPQILI*VNSVELNAFFL Trigger: AAGGAAAAATGCATTAAGTTCTACACTGTTAACTCAGATCAGTATTTGGGGAAATAGGAAACAAAGTCCTCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| CDS-3UTR TCA 90 bp | AACTGGTACTGCCGTTCTCTCTTGGATACAGAGGCGGCAAGAGGAAGCTGTGCCGAGAAGACGCGGGCGTaGCACGATGCCCCGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NWYCRSLLDTEAARGSCAEKTRA*HDAPQV Trigger: GACCTGCGGGGCATCGTGTCACGCCCGCGTCTTCTC...GGCACAGCTTCCTCTTGCCGCCTCTGTATCCAAGAGAGAACGGCAGTACCAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| CDS-3UTR GCA 90 bp | TATGTGAATAGGGGTGTCACTGCCCATTGTGGACTGGGCTCTTCCACCTCACAGGGGTCCCAAGGCGTCTaGGAGCTGCAGCAGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: YVNRGVTAHCGLGSSTSQGSQGV*ELQQLP Trigger: AGGGAGCTGCTGCAGCTCGCAGACGCCTTGGGACCC...CTGTGAGGTGGAAGAGCCCAGTCCACAATGGGCAGTGACACCCCTATTCACATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
||
| CDS-3UTR CCA 90 bp | GGTACTGCCGTTCTCTCTTGGATACAGAGGCGGCAAGAGGAAGCTGTGCCTGACTGGTGTAGTTTCCAGTaGCCAAGGAGCCAGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTAVLSWIQRRQEEAVPDWCSFQ*PRSQQS Trigger: GCTCTGCTGGCTCCTTGGCCACTGGAAACTACACCA...GTCAGGCACAGCTTCCTCTTGCCGCCTCTGTATCCAAGAGAGAACGGCAGTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
||
| 3UTR CAA 72 bp | TCCCTGGCCTCCGACACATCGGCAGACAGACACAGATaGGTCTCCTTCTTCTGCATGAGCCGGAGCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLASDTSADRHR*VSFFCMSRSSF Trigger: AAAGCTGCTCCGGCTCATGCAGAAGAAGGAGACCAATCTGTGTCTGTCTGCCGATGTGTCGGAGGCCAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| CDS-3UTR GCA 90 bp | GCGGTTAGCCGCTGCAAGTATTCCCCGGCCTACAATGATGACATCAGAACCGCGCCGAACTTGAAAGCCTaGACGTCATACAGCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVSRCKYSPAYNDDIRTAPNLKA*TSYSSV Trigger: CACCGAGCTGTATGACGTGCAGGCTTTCAAGTTCGG...CGCGGTTCTGATGTCATCATTGTAGGCCGGGGAATACTTGCAGCGGCTAACCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
||
| CDS-3UTR GCA 90 bp | GGAATTGGAGTTACAGATGGTTTTGAGACACAATGTGGGTGCTGGGAACCACATAAGGCGTCTGCGAGCTaGAGCAGCTCCCTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GIGVTDGFETQCGCWEPHKASAS*SSSLAS Trigger: GGAGGCCAGGGAGCTGCTGCAGCTCGCAGACGCCTT...ATGTGGTTCCCAGCACCCACATTGTGTCTCAAAACCATCTGTAACTCCAATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
||
| CDS-3UTR CCA 90 bp | TGGTTCCTAAAAGCCTGCTCTAAAGAGCGTGTGTGTGCACTTAACTTCAGGGTCTGGAGGCGGATCCCCTaGGCCTGCAGCTTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WFLKACSKERVCALNFRVWRRIP*ACSLSL Trigger: CAAGGACAAGCTGCAGGCCCAGGGGATCCGCCTCCA...GACCCTGAAGTTAAGTGCACACACACGCTCTTTAGAGCAGGCTTTTAGGAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
||
| CDS-3UTR TCA 90 bp | AATGGGTGGAATAGTAAGTCGTCCTCAAGAGGACTTTGTTTCCTATTTCCCCAAGAGAAGACGCGGGCGTaGCACGATGCCCCGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NGWNSKSSSRGLCFLFPQEKTRA*HDAPQV Trigger: GACCTGCGGGGCATCGTGTCACGCCCGCGTCTTCTC...TTGGGGAAATAGGAAACAAAGTCCTCTTGAGGACGACTTACTATTCCACCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| CDS-3UTR TCA 90 bp | GGTACTGCCGTTCTCTCTTGGATACAGAGGCGGCAAGAGGAAGCTGTGCCTGACAAACGTTCTCCTGAATaGACCTCTTCACTCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GTAVLSWIQRRQEEAVPDKRSPE*TSSLSR Trigger: TCGGGAGAGTGAAGAGGTTCATTCAGGAGAACGTTT...GTCAGGCACAGCTTCCTCTTGCCGCCTCTGTATCCAAGAGAGAACGGCAGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
||
| CDS-3UTR CCA 90 bp | ACCCACCTGAGGCTCATGCCTTGTTATGCTTTTACTCGATGGGACCATGCTGCAAGAATCTCCAGCATTTaGGAGAGCGTGCACACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: THLRLMPCYAFTRWDHAARISSI*ESVHTA Trigger: CGCCGTGTGCACGCTCTCCCAAATGCTGGAGATTCT...TGCAGCATGGTCCCATCGAGTAAAAGCATAACAAGGCATGAGCCTCAGGTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
||
| CDS-3UTR TCA 90 bp | GCATGCGGACCACAGGGGCAACTGGTTCAAGTTTACGGGGGCTGTGAATTCCACGAGAAAACGTTCTCCTaGATGAACCTCTTCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ACGPQGQLVQVYGGCEFHEKTFS*MNLFTL Trigger: GAGAGTGAAGAGGTTCATTCAGGAGAACGTTTTCTC...GTGGAATTCACAGCCCCCGTAAACTTGAACCAGTTGCCCCTGTGGTCCGCATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
||
| CDS-3UTR GCA 90 bp | GTGAGTGCTAAAGGATCTTTCCTTTTGGCAGGAATAAGACTTAAGGTACCACTGCGGATCCCCTGGGCCTaGAGCTTGTCCTTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSAKGSFLLAGIRLKVPLRIPWA*SLSLPP Trigger: GGGAGGCAAGGACAAGCTGCAGGCCCAGGGGATCCG...CAGTGGTACCTTAAGTCTTATTCCTGCCAAAAGGAAAGATCCTTTAGCACTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
||
| CDS-3UTR GCA 90 bp | ATGACTAAGCTAAAGCCTAGAAGGGAAGTTCCATTAGCTCCTGACAGCTTTTCTCCTGCAGCTTGTCCTTaGCTCCCTGCTCCCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MTKLKPRREVPLAPDSFSPAACP*LPAPGP Trigger: TGGACCGGGAGCAGGGAGGCAAGGACAAGCTGCAGG...AGAAAAGCTGTCAGGAGCTAATGGAACTTCCCTTCTAGGCTTTAGCTTAGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
||
| CDS-3UTR CCA 90 bp | TACATACTCTCAGACCATTCTGTCTGGCGCTCACCAGTTATCTCAAGTCTAGACCAGGTCGATGTAGACTaGGGAGGAGAGCCCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YILSDHSVWRSPVISSLDQVDVD*GGEPAL Trigger: AAGAGCGGGCTCTCCTCCCCAGTCTACATCGACCTG...GTCTAGACTTGAGATAACTGGTGAGCGCCAGACAGAATGGTCTGAGAGTATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
||
| CDS-3UTR CCA 90 bp | CAAATACCAGTCTTGAGAAAGCTTTCAAAAGGGCTGCTCATTACAGTACCAATGGCTGCAGCAGCTCCCTaGCCTCCGACACATCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QIPVLRKLSKGLLITVPMAAAAP*PPTHRQ Trigger: CTGCCGATGTGTCGGAGGCCAGGGAGCTGCTGCAGC...CATTGGTACTGTAATGAGCAGCCCTTTTGAAAGCTTTCTCAAGACTGGTATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
||
| 3UTR CAA 72 bp | AATGATGACATCAGAACCGCGTTTCCCGATCACTTCTaGGGGACTATTGTACTGCTGGCCAAGGTGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NDDIRTAFPDHF*GTIVLLAKVIP Trigger: GGGGATCACCTTGGCCAGCAGTACAATAGTCCCCAAGAAGTGATCGGGAAACGCGGTTCTGATGTCATCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| CDS-3UTR TCA 90 bp | AACTGGTACTGCCGTTCTCTCTTGGATACAGAGGCGGCAAGAGGAAGCTGTGCCTTCAGAATGTCGACATaGGTTTTGAGCATGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NWYCRSLLDTEAARGSCAFRMST*VLSMQM Trigger: CATCTGCATGCTCAAAACTCATGTCGACATTCTGAA...GGCACAGCTTCCTCTTGCCGCCTCTGTATCCAAGAGAGAACGGCAGTACCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR TCA 90 bp | AATGGGTGGAATAGTAAGTCGTCCTCAAGAGGACTTTGTTTCCTATTTCCCCAAGCCTTTCACAACTCCTaGGCCTGGCACGACGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NGWNSKSSSRGLCFLFPQAFHNS*AWHDVS Trigger: GCTCACGTCGTGCCAGGCTCAGGAGTTGTGAAAGGC...TTGGGGAAATAGGAAACAAAGTCCTCTTGAGGACGACTTACTATTCCACCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR CCA 90 bp | CCACCTCACAGGATTATTAAACAAGAAAATGCCCTCACAGGAGTGTCCATAGTGCAGGTCGATGTAGACTaGGGAGGAGAGCCCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPHRIIKQENALTGVSIVQVDVD*GGEPAL Trigger: AAGAGCGGGCTCTCCTCCCCAGTCTACATCGACCTG...CACTATGGACACTCCTGTGAGGGCATTTTCTTGTTTAATAATCCTGTGAGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| CDS-3UTR TCA 90 bp | TATGTGAATAGGGGTGTCACTGCCCATTGTGGACTGGGCTCTTCCACCTCACAGCACTATATCTGCCCATaGAGCTATTTTAAAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: YVNRGVTAHCGLGSSTSQHYICP*SYFKGA Trigger: GGCACCTTTAAAATAGCTTCATGGGCAGATATAGTG...CTGTGAGGTGGAAGAGCCCAGTCCACAATGGGCAGTGACACCCCTATTCACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR GCA 90 bp | CTAAAGCCTAGAAGGGAAGTTCCATTAGCTCCTGACAGCTTTTCTCAGACATTATTGTCCTTGCCTCCCTaGTCCCGGTCCAACAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LKPRREVPLAPDSFSQTLLSLPP*SRSNST Trigger: AGTGCTGTTGGACCGGGAGCAGGGAGGCAAGGACAA...TAATGTCTGAGAAAAGCTGTCAGGAGCTAATGGAACTTCCCTTCTAGGCTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR GCA 90 bp | GGAATTGGAGTTACAGATGGTTTTGAGACACAATGTGGGTGCTGGGAACCACATGCGTCGATCTTTTCCTaGTGCTGGAGAATCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GIGVTDGFETQCGCWEPHASIFS*CWRISS Trigger: GCTGGAGATTCTCCAGCAGCAGGAAAAGATCGACGC...ATGTGGTTCCCAGCACCCACATTGTGTCTCAAAACCATCTGTAACTCCAATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| 3UTR CAA 72 bp | AAACTGGATCCCCTGGAATTGGAGTTACAGATGGTTTaGAGACACAATGTGGGTGCTGGGAACCACATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLDPLELELQMV*RHNVGAGNHML Trigger: CAGCATGTGGTTCCCAGCACCCACATTGTGTCTCAAAACCATCTGTAACTCCAATTCCAGGGGATCCAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR CAA 72 bp | TCAGACATTAGCTCAAACCCACCTGAGGCTCATGCCTaGTTATGCTTTTACTCGATGGGACCATGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SDISSNPPEAHA*LCFYSMGPCCS Trigger: ACTGCAGCATGGTCCCATCGAGTAAAAGCATAACAAGGCATGAGCCTCAGGTGGGTTTGAGCTAATGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| CDS-3UTR TCA 90 bp | AGAATTAAGCAGTATAGCCCAAGGAATCTGAAAGGTGGCAGCTGCCAAACAAATGAGCCTGGCACGACGTaGGCATTCACTATATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RIKQYSPRNLKGGSCQTNEPGTT*AFTISA Trigger: GGCAGATATAGTGAATGCTCACGTCGTGCCAGGCTC...ATTTGTTTGGCAGCTGCCACCTTTCAGATTCCTTGGGCTATACTGCTTAATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR TCA 90 bp | TGGTTCCTAAAAGCCTGCTCTAAAGAGCGTGTGTGTGCACTTAACTTCAGGGTCACTCCTGGGGTCAAGTaGAGAAACTCTGGTTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: WFLKACSKERVCALNFRVTPGVK*RNSGFM Trigger: CATGAAACCAGAGTTTCTTCACTTGACCCCAGGAGT...GACCCTGAAGTTAAGTGCACACACACGCTCTTTAGAGCAGGCTTTTAGGAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR CCA 90 bp | TTTAATGGGTGGAATAGTAAGTCGTCCTCAAGAGGACTTTGTTTCCTATTTCCCTTTGAGGCAAGCGGGTaGGTTCCAGGCAGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FNGWNSKSSSRGLCFLFPFEASG*VPGSSA Trigger: AGCTGAGCTGCCTGGAACCCACCCGCTTGCCTCAAA...GGGAAATAGGAAACAAAGTCCTCTTGAGGACGACTTACTATTCCACCCATTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR GCA 90 bp | TGGTTCCTAAAAGCCTGCTCTAAAGAGCGTGTGTGTGCACTTAACTTCAGGGTCTCGATCTTTTCCTGCTaGTGGAGAATCTCCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: WFLKACSKERVCALNFRVSIFSC*WRISSI Trigger: AATGCTGGAGATTCTCCAGCAGCAGGAAAAGATCGA...GACCCTGAAGTTAAGTGCACACACACGCTCTTTAGAGCAGGCTTTTAGGAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR GCA 90 bp | TGGTTCCTAAAAGCCTGCTCTAAAGAGCGTGTGTGTGCACTTAACTTCAGGGTCGAAACTCTGGTTTCATaGTTACTCGGGAGCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WFLKACSKERVCALNFRVETLVS*LLGSQK Trigger: TTTCTGGCTCCCGAGTAAGCATGAAACCAGAGTTTC...GACCCTGAAGTTAAGTGCACACACACGCTCTTTAGAGCAGGCTTTTAGGAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR CCA 90 bp | ACCCACCTGAGGCTCATGCCTTGTTATGCTTTTACTCGATGGGACCATGCTGCACTTCTACAAGGCGCTTaGTACCATAATCCTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: THLRLMPCYAFTRWDHAALLQGA*YHNPLF Trigger: AAACAAAGGATTATGGTACCAAGCGCCTTGTAGAAG...TGCAGCATGGTCCCATCGAGTAAAAGCATAACAAGGCATGAGCCTCAGGTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR CCA 90 bp | AAACTGCCATGCCCAGCCATCTGGAAAAGCAGACAGCATTTAACATTATTTTTGTCCCGACTGCTGCCTTaGTGTAGTTTCCAGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLPCPAIWKSRQHLTLFLSRLLP*CSFQWP Trigger: TGGCCACTGGAAACTACACCAAGGCAGCAGTCGGGA...CAAAAATAATGTTAAATGCTGTCTGCTTTTCCAGATGGCTGGGCATGGCAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR TCA 90 bp | CAAATACCAGTCTTGAGAAAGCTTTCAAAAGGGCTGCTCATTACAGTACCAATGGGGAATGTGATTGGCTaGGCAGATAACTGTCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QIPVLRKLSKGLLITVPMGNVIG*ADNCRQ Trigger: CTGGCGACAGTTATCTGCTCAGCCAATCACATTCCC...CATTGGTACTGTAATGAGCAGCCCTTTTGAAAGCTTTCTCAAGACTGGTATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR TCA 90 bp | CAGTACCAATGCAGTGATTACAAGTTAGACCATGATACAATGCTGCAGAGTCTCAGCTCATTTCTGCAATaGGCAGGCAGGCTCGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: QYQCSDYKLDHDTMLQSLSSFLQ*AGRLDV Trigger: TACATCGAGCCTGCCTGCTCATTGCAGAAATGAGCT...GAGACTCTGCAGCATTGTATCATGGTCTAACTTGTAATCACTGCATTGGTACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR GCA 90 bp | CAAATACCAGTCTTGAGAAAGCTTTCAAAAGGGCTGCTCATTACAGTACCAATGCCGAACTTGAAAGCCTaGACGTCATACAGCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QIPVLRKLSKGLLITVPMPNLKA*TSYSSV Trigger: CACCGAGCTGTATGACGTGCAGGCTTTCAAGTTCGG...CATTGGTACTGTAATGAGCAGCCCTTTTGAAAGCTTTCTCAAGACTGGTATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| CDS-3UTR GCA 90 bp | ATTAAACAAGAAAATGCCCTCACAGGAGTGTCCATAGTGCAATCTTGGCACACTTTGGTCTCCTTCTTCTaGATGAGCCGGAGCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IKQENALTGVSIVQSWHTLVSFF*MSRSSF Trigger: AAAGCTGCTCCGGCTCATGCAGAAGAAGGAGACCAA...AGTGTGCCAAGATTGCACTATGGACACTCCTGTGAGGGCATTTTCTTGTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| 3UTR CAA 72 bp | CCTGGAAGCTATAAGAGGAAACTGGATCCCCTGGAATaGGAGTTACAGATGGTTTTGAGACACAATGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGSYKRKLDPLE*ELQMVLRHNVG Trigger: ACCCACATTGTGTCTCAAAACCATCTGTAACTCCAATTCCAGGGGATCCAGTTTCCTCTTATAGCTTCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR CAA 72 bp | GCAGTCGGACTCCTTCAAGCACGTGCTATTGCTACTTaGATTCCACTTTACTACAGGATGCACCATTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: AVGLLQARAIAT*IPLYYRMHHYL Trigger: CAAGTAATGGTGCATCCTGTAGTAAAGTGGAATCAAAGTAGCAATAGCACGTGCTTGAAGGAGTCCGACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| 3UTR CAA 72 bp | ATTTCCTGTCTTCAAATATTAAGAACTCGTGGCGTTTaGCCAGGGCTGTCAACTCCTCCATCACATCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISCLQILRTRGV*PGLSTPPSHPE Trigger: CTCTGGATGTGATGGAGGAGTTGACAGCCCTGGCAAAACGCCACGAGTTCTTAATATTTGAAGACAGGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131990.2 |
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| CDS-3UTR GCA 90 bp | ACTTTACTACAGGATGCACCATTACTTGCTGAGTGTATGCAGTTGCTAATCTTAAGCAGAGCTCATTTCTaGAATGAGCAGGCAGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TLLQDAPLLAECMQLLILSRAHF*NEQAGS Trigger: CGAGCCTGCCTGCTCATTGCAGAAATGAGCTCTGCT...TAAGATTAGCAACTGCATACACTCAGCAAGTAATGGTGCATCCTGTAGTAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR CCA 90 bp | TACATACTCTCAGACCATTCTGTCTGGCGCTCACCAGTTATCTCAAGTCTAGACCAAGTGAAGAAACTCTaGTTTCATGCTTACTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YILSDHSVWRSPVISSLDQVKKL*FHAYSG Trigger: TCCCGAGTAAGCATGAAACCAGAGTTTCTTCACTTG...GTCTAGACTTGAGATAACTGGTGAGCGCCAGACAGAATGGTCTGAGAGTATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR TCA 90 bp | ATTAAGCAGTATAGCCCAAGGAATCTGAAAGGTGGCAGCTGCCAAACAAATACCGTTATGATTAGCTGCTaGGAAAACGTTCTCCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IKQYSPRNLKGGSCQTNTVMISC*ENVLLN Trigger: ATTCAGGAGAACGTTTTCTCAGCAGCTAATCATAAC...GGTATTTGTTTGGCAGCTGCCACCTTTCAGATTCCTTGGGCTATACTGCTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR CCA 90 bp | AAACTGCCATGCCCAGCCATCTGGAAAAGCAGACAGCATTTAACATTATTTTTGATCTTTTCCTGCTGCTaGAGAATCTCCAGCATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLPCPAIWKSRQHLTLFLIFSCC*RISSIW Trigger: CCAAATGCTGGAGATTCTCCAGCAGCAGGAAAAGAT...CAAAAATAATGTTAAATGCTGTCTGCTTTTCCAGATGGCTGGGCATGGCAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| 3UTR CAA 72 bp | ATACAGCTGTCTGTGAGTGCTAAAGGATCTTTCCTTTaGGCAGGAATAAGACTTAAGGTACCACTGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: IQLSVSAKGSFL*AGIRLKVPLMM Trigger: CATCATCAGTGGTACCTTAAGTCTTATTCCTGCCAAAAGGAAAGATCCTTTAGCACTCACAGACAGCTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| CDS GCA 90 bp | GAGGAGAGCCCGCTCTTCAGGACGAAGCTCCCGAACTTGAAAGCCTaGACGTCATACAGCTCGGTGACCAAGGGGCCCAGGGCTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EESPLFRTKLPNLKA*TSYSSVTKGPRAWL Trigger: CAGCCAAGCCCTGGGCCCCTTGGTCACCGAGCTGTATGACGTGCAGGCTTTCAAGTTCGGGAGCTTCGTCCTGAAGAGCGGGCTCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| CDS-3UTR CAA 90 bp | CTAAAAGCCTGCTCTAAAGAGCGTGTGTGTGCACTTAACTTCAGGGTCTCAGTTCCCTGGGCCTGCAGCTaGTCCTTGCCTCCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LKACSKERVCALNFRVSVPWACS*SLPPCS Trigger: GGAGCAGGGAGGCAAGGACAAGCTGCAGGCCCAGGG...AACTGAGACCCTGAAGTTAAGTGCACACACACGCTCTTTAGAGCAGGCTTTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR CAA 90 bp | ATTAAGCAGTATAGCCCAAGGAATCTGAAAGGTGGCAGCTGCCAAACAAATACCACGAAGCTCCCGAACTaGAAAGCCTGCACGTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: IKQYSPRNLKGGSCQTNTTKLPN*KACTSY Trigger: GTATGACGTGCAGGCTTTCAAGTTCGGGAGCTTCGT...GGTATTTGTTTGGCAGCTGCCACCTTTCAGATTCCTTGGGCTATACTGCTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| CDS-3UTR CAA 90 bp | AAGTTAGACCATGATACAATGCTGCAGAGTCTCTCTTCACAGACCCTGTGCAGGCCAAAGCTGAGTTCTTaGCACGCTTTCTTCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KLDHDTMLQSLSSQTLCRPKLSS*HAFFSG Trigger: TCCTGAGAAGAAAGCGTGCAAAGAACTCAGCTTTGG...CCTGCACAGGGTCTGTGAAGAGAGACTCTGCAGCATTGTATCATGGTCTAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS-3UTR CAA 90 bp | AATGGGTGGAATAGTAAGTCGTCCTCAAGAGGACTTTGTTTCCTATTTCCCCAAACGAAGCTCCCGAACTaGAAAGCCTGCACGTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: NGWNSKSSSRGLCFLFPQTKLPN*KACTSY Trigger: GTATGACGTGCAGGCTTTCAAGTTCGGGAGCTTCGT...TTGGGGAAATAGGAAACAAAGTCCTCTTGAGGACGACTTACTATTCCACCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| CDS-3UTR CAA 90 bp | CATTCTGTCTGGCGCTCACCAGTTATCTCAAGTCTAGACTATTTACATACAGCTGCAGACAGACACAGATaGGTCTCCTTCTTCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: HSVWRSPVISSLDYLHTAADRHR*VSFFCM Trigger: CATGCAGAAGAAGGAGACCAATCTGTGTCTGTCTGC...AGCTGTATGTAAATAGTCTAGACTTGAGATAACTGGTGAGCGCCAGACAGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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| CDS GCA 72 bp | CCGCTCTTCAGGACGAAGCTCCCGAACTTGAAAGCCTaGACGTCATACAGCTCGGTGACCAAGGGGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PLFRTKLPNLKA*TSYSSVTKGPR Trigger: CCTGGGCCCCTTGGTCACCGAGCTGTATGACGTGCAGGCTTTCAAGTTCGGGAGCTTCGTCCTGAAGAGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| CDS CAA 72 bp | GAGGAGAGCCCGCTCTTCAGGACGAAGCTCCCGAACTaGAAAGCCTGCACGTCATACAGCTCGGTGACCAAG | + |
|
Preference number: 6 (lower is better) Translates to: EESPLFRTKLPN*KACTSYSSVTK Trigger: CTTGGTCACCGAGCTGTATGACGTGCAGGCTTTCAAGTTCGGGAGCTTCGTCCTGAAGAGCGGGCTCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023510.7 ENSMUST00000131990.2 |
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| CDS CCA 72 bp | CCGCTGGTGACGACGTCCTCAATGACCAGACAGGTCTaGCCCGGATTAATCTCTCCTTCTACAAGGCGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PLVTTSSMTRQV*PGLISPSTRRL Trigger: CAAGCGCCTTGTAGAAGGAGAGATTAATCCGGGCCAGACCTGTCTGGTCATTGAGGACGTCGTCACCAGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023510.7 |
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