RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UMOD (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030963

Ensembl transcript IDs: ENSMUST00000033263.6, ENSMUST00000207261.2, ENSMUST00000207378.2, ENSMUST00000207460.2, ENSMUST00000209095.2

Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACTCCTaGCCAGCAGGAAGTGAGCTGGGAGCCACACCAGGTTTTCTGCTT +
Preference number: 1 (lower is better)
Translates to: ELPLSWLITSLHPHS*PAGSELGATPGFLL
Trigger: AAGCAGAAAACCTGGTGTGGCTCCCAGCTCACTTCCTGCTGGCCAGGAGTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR TCA 90 bp CATTGGCCCCACACTCCAGCCTGTACTCCAATTGGGAGACATCTGTaGTGTTGGAGTCCTGTTTACACTGGCAGCGCCATCTGCCGTTAT +
Preference number: 1 (lower is better)
Translates to: HWPHTPACTPIGRHL*CWSPVYTGSAICRY
Trigger: ATAACGGCAGATGGCGCTGCCAGTGTAAACAGGACTCCAACATCACAGATGTCTCCCAATTGGAGTACAGGCTGGAGTGTGGGGCCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
3UTR GCA 90 bp TGGAGTCCTGTTTACACTGGCAGCGCCATCTGCCGTTATCCGATATaGAATCTTCATCTACCCTGCATTCTTCGCAAGTCCCCTCCACGG +
Preference number: 1 (lower is better)
Translates to: WSPVYTGSAICRYPI*NLHLPCILRKSPPR
Trigger: CCGTGGAGGGGACTTGCGAAGAATGCAGGGTAGATGAAGATTGCATATCGGATAACGGCAGATGGCGCTGCCAGTGTAAACAGGACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
3UTR CCA 90 bp GACATCTTGATGTCATTGGCCCCACACTCCAGCCTGTACTCCAATTaGGAGACATCTGTGATGTTGGAGTCCTGTTTACACTGGCAGCGC +
Preference number: 1 (lower is better)
Translates to: DILMSLAPHSSLYSN*ETSVMLESCLHWQR
Trigger: GCGCTGCCAGTGTAAACAGGACTCCAACATCACAGATGTCTCCCAATTGGAGTACAGGCTGGAGTGTGGGGCCAATGACATCAAGATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
3UTR TCA 90 bp TTGCCACATTCCTTCAGGAGACAGGGGCTTCATACATATCACATTTaGAGGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGT +
Preference number: 1 (lower is better)
Translates to: LPHSFRRQGLHTYHI*RKNSTERCQLVFDG
Trigger: ACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCCTTCAAATGTGATATGTATGAAGCCCCTGTCTCCTGAAGGAATGTGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR-3UTR TCA 90 bp TCCCACCATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCCTGGCCAGCAGGAAGTaGGCTGGGAGCCACACCAGG +
Preference number: 2 (lower is better)
Translates to: SHHVMPSTTDSAHSNCVFLASRK*AGSHTR
Trigger: CCTGGTGTGGCTCCCAGCTCACTTCCTGCTGGCCAG...GAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATGGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR-3UTR CCA 90 bp CATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTAACCTGCATCCCCACTCCTaGCCAGCAGGAAGTGAGCTG +
Preference number: 2 (lower is better)
Translates to: HVMPSTTDSAHSNCVFCNLHPHS*PAGSEL
Trigger: CAGCTCACTTCCTGCTGGCCAGGAGTGGGGATGCAG...GTTACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR CAA 90 bp GGACATCTTGATGTCATTGGCCCCACACTCCAGCCTGTACTCCAATaGGGAGACATCTGTGATGTTGGAGTCCTGTTTACACTGGCAGCG +
Preference number: 2 (lower is better)
Translates to: GHLDVIGPTLQPVLQ*GDICDVGVLFTLAA
Trigger: CGCTGCCAGTGTAAACAGGACTCCAACATCACAGATGTCTCCCAATTGGAGTACAGGCTGGAGTGTGGGGCCAATGACATCAAGATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
3UTR CAA 90 bp CCCAAACTCTGTAGCTGGCACTTTCTGAGGGACATCTTGATGTCATaGGCCCCACACTCCAGCCTGTACTCCAATTGGGAGACATCTGTG +
Preference number: 2 (lower is better)
Translates to: PKLCSWHFLRDILMS*APHSSLYSNWETSV
Trigger: CACAGATGTCTCCCAATTGGAGTACAGGCTGGAGTGTGGGGCCAATGACATCAAGATGTCCCTCAGAAAGTGCCAGCTACAGAGTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
3UTR-3UTR TCA 90 bp GTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGCCTAGTTTCTTAGAGCTGGCCAGCAGGAAGTaGGCTGGGAGCCACACCAGG +
Preference number: 2 (lower is better)
Translates to: VSHLRSHSRTCIEPSFLELASRK*AGSHTR
Trigger: CCTGGTGTGGCTCCCAGCTCACTTCCTGCTGGCCAG...CTCTAAGAAACTAGGCTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR-3UTR CCA 90 bp GTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGCCTAGTTTCTTAGAGCTGCATCCCCACTCCTaGCCAGCAGGAAGTGAGCTG +
Preference number: 2 (lower is better)
Translates to: VSHLRSHSRTCIEPSFLELHPHS*PAGSEL
Trigger: CAGCTCACTTCCTGCTGGCCAGGAGTGGGGATGCAG...CTCTAAGAAACTAGGCTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR-3UTR CCA 90 bp TGCCACATTCCTTCAGGAGACAGGGGCTTCATACATATCACATTTGAAGGAAGAAGAGTACGTGCAAGCTaGAGGCAGTGTGAGCTCCCT +
Preference number: 2 (lower is better)
Translates to: CHIPSGDRGFIHITFEGRRVRAS*RQCELP
Trigger: AGGGAGCTCACACTGCCTCCAGCTTGCACGTACTCT...TCTTCCTTCAAATGTGATATGTATGAAGCCCCTGTCTCCTGAAGGAATGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR-3UTR CCA 90 bp GTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGCCTAGTTTCTTAGAGCAGCAGGAAGTGAGCTaGGAGCCACACCAGGTTTTC +
Preference number: 2 (lower is better)
Translates to: VSHLRSHSRTCIEPSFLEQQEVS*EPHQVF
Trigger: GAAAACCTGGTGTGGCTCCCAGCTCACTTCCTGCTG...CTCTAAGAAACTAGGCTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR-3UTR TCA 90 bp TCCCACCATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCCATACATATCACATTTaGAGGAAGAACAGCACTGAA +
Preference number: 2 (lower is better)
Translates to: SHHVMPSTTDSAHSNCVFHTYHI*RKNSTE
Trigger: TTCAGTGCTGTTCTTCCTTCAAATGTGATATGTATG...GAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATGGTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR-3UTR TCA 90 bp CATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTAACAAGGAAGAACAGCACTaGAAGATGCCAACTTGTTTT +
Preference number: 2 (lower is better)
Translates to: HVMPSTTDSAHSNCVFCNKEEQH*KMPTCF
Trigger: AAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCCTT...GTTACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR-3UTR GCA 90 bp CACCATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTAACAGCACTGAAAGATaGCAACTTGTTTTTGATGGT +
Preference number: 2 (lower is better)
Translates to: HHVMPSTTDSAHSNCVFCNSTER*QLVFDG
Trigger: ACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTT...ACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR-3UTR CCA 90 bp CTGAAGCCTGAGCATTGTCTGTCATTCAGGTACATGAAGACATTCATAAAGCCCAGCCTGTACTCCAATTaGGAGACATCTGTGATGTTG +
Preference number: 2 (lower is better)
Translates to: LKPEHCLSFRYMKTFIKPSLYSN*ETSVML
Trigger: CAACATCACAGATGTCTCCCAATTGGAGTACAGGCT...GGGCTTTATGAATGTCTTCATGTACCTGAATGACAGACAATGCTCAGGCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
3UTR-3UTR TCA 90 bp CCTGAGCATTGTCTGTCATTCAGGTACATGAAGACATTCATAAAGCCCAAACTCATTGGGAGACATCTGTaGTGTTGGAGTCCTGTTTAC +
Preference number: 2 (lower is better)
Translates to: PEHCLSFRYMKTFIKPKLIGRHL*CWSPVY
Trigger: GTAAACAGGACTCCAACATCACAGATGTCTCCCAAT...GAGTTTGGGCTTTATGAATGTCTTCATGTACCTGAATGACAGACAATGCTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
3UTR-3UTR CCA 90 bp AAGTTCATATACATTGTGTGTCTCATCTTAGATCACATAGCAGAACATGCATTGCAGCAGGAAGTGAGCTaGGAGCCACACCAGGTTTTC +
Preference number: 2 (lower is better)
Translates to: KFIYIVCLILDHIAEHALQQEVS*EPHQVF
Trigger: GAAAACCTGGTGTGGCTCCCAGCTCACTTCCTGCTG...CAATGCATGTTCTGCTATGTGATCTAAGATGAGACACACAATGTATATGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR CAA 90 bp ATACATATCACATTTGAAGGAAGAACAGCACTGAAAGATGCCAACTaGTTTTTGATGGTGAGGATTAAAGAAAGAGTACGTGCAAGCTGG +
Preference number: 2 (lower is better)
Translates to: IHITFEGRTALKDAN*FLMVRIKERVRASW
Trigger: CCAGCTTGCACGTACTCTTTCTTTAATCCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCCTTCAAATGTGATATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR-3UTR TCA 90 bp GTTCATATACATTGTGTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGCATACATATCACATTTaGAGGAAGAACAGCACTGAA +
Preference number: 2 (lower is better)
Translates to: VHIHCVSHLRSHSRTCIEHTYHI*RKNSTE
Trigger: TTCAGTGCTGTTCTTCCTTCAAATGTGATATGTATG...CTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACACACAATGTATATGAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR-3UTR GCA 90 bp ATGAAGTCCATAAAGATAGAGAAAGGATCTGTTTTATTCCCACCATGTAATGCCAACAGCACTGAAAGATaGCAACTTGTTTTTGATGGT +
Preference number: 2 (lower is better)
Translates to: MKSIKIEKGSVLFPPCNANSTER*QLVFDG
Trigger: ACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTT...GGCATTACATGGTGGGAATAAAACAGATCCTTTCTCTATCTTTATGGACTTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR TCA 72 bp CACACTCCAGCCTGTACTCCAATTGGGAGACATCTGTaGTGTTGGAGTCCTGTTTACACTGGCAGCGCCATC +
Preference number: 3 (lower is better)
Translates to: HTPACTPIGRHL*CWSPVYTGSAI
Trigger: GATGGCGCTGCCAGTGTAAACAGGACTCCAACATCACAGATGTCTCCCAATTGGAGTACAGGCTGGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
3UTR CCA 72 bp TTGATGGTGAGGATTAAAGAAAGAGTACGTGCAAGCTaGAGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATA +
Preference number: 3 (lower is better)
Translates to: LMVRIKERVRAS*RQCELPLSWLI
Trigger: TATCAGCCAGGAGAGAGGGAGCTCACACTGCCTCCAGCTTGCACGTACTCTTTCTTTAATCCTCACCATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR CCA 72 bp ATGTCATTGGCCCCACACTCCAGCCTGTACTCCAATTaGGAGACATCTGTGATGTTGGAGTCCTGTTTACAC +
Preference number: 3 (lower is better)
Translates to: MSLAPHSSLYSN*ETSVMLESCLH
Trigger: GTGTAAACAGGACTCCAACATCACAGATGTCTCCCAATTGGAGTACAGGCTGGAGTGTGGGGCCAATGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
3UTR-3UTR CAA 90 bp CTGAAGCCTGAGCATTGTCTGTCATTCAGGTACATGAAGACATTCATAAAGCCCCAGCCTGTACTCCAATaGGGAGACATCTGTGATGTT +
Preference number: 3 (lower is better)
Translates to: LKPEHCLSFRYMKTFIKPQPVLQ*GDICDV
Trigger: AACATCACAGATGTCTCCCAATTGGAGTACAGGCTG...GGGCTTTATGAATGTCTTCATGTACCTGAATGACAGACAATGCTCAGGCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
3UTR-3UTR CAA 90 bp GTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGCCTAGTTTCTTAGAGCTGAAAGATGCCAACTaGTTTTTGATGGTGAGGATT +
Preference number: 3 (lower is better)
Translates to: VSHLRSHSRTCIEPSFLELKDAN*FLMVRI
Trigger: AATCCTCACCATCAAAAACAAGTTGGCATCTTTCAG...CTCTAAGAAACTAGGCTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR-3UTR CAA 90 bp ATGAAGTCCATAAAGATAGAGAAAGGATCTGTTTTATTCCCACCATGTAATGCCGATGCCAACTTGTTTTaGATGGTGAGGATTAAAGAA +
Preference number: 3 (lower is better)
Translates to: MKSIKIEKGSVLFPPCNADANLF*MVRIKE
Trigger: TTCTTTAATCCTCACCATCAAAAACAAGTTGGCATC...GGCATTACATGGTGGGAATAAAACAGATCCTTTCTCTATCTTTATGGACTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR-3UTR CAA 90 bp AAGTTCATATACATTGTGTGTCTCATCTTAGATCACATAGCAGAACATGCATTGCTGAAAGATGCCAACTaGTTTTTGATGGTGAGGATT +
Preference number: 3 (lower is better)
Translates to: KFIYIVCLILDHIAEHALLKDAN*FLMVRI
Trigger: AATCCTCACCATCAAAAACAAGTTGGCATCTTTCAG...CAATGCATGTTCTGCTATGTGATCTAAGATGAGACACACAATGTATATGAACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp TGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACTCCTGGCCATGGGTGCCGCCGTGTTaGATCGCAGGACGGGCACAC +
Preference number: 4 (lower is better)
Translates to: CELPLSWLITSLHPHSWPWVPPC*IAGRAH
Trigger: GTGTGCCCGTCCTGCGATGCAACACGGCGGCACCCA...TGGCCAGGAGTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp TGGAGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACTGGGTGCCGCCGTGTTaGATCGCAGGACGGGCACAC +
Preference number: 4 (lower is better)
Translates to: WRQCELPLSWLITSLHPHWVPPC*IAGRAH
Trigger: GTGTGCCCGTCCTGCGATGCAACACGGCGGCACCCA...GTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp GCAAGCTGGAGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATGGCAGGAGCACGTTGTaGCCACACCATCCACCGTGC +
Preference number: 4 (lower is better)
Translates to: ASWRQCELPLSWLITSLHGRSTL*PHHPPC
Trigger: GCACGGTGGATGGTGTGGTCACAACGTGCTCCTGCC...ATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCTCCAGCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp CACTCCTGGCCAGCAGGAAGTGAGCTGGGAGCCACACCAGGTTTTCTGCTTTCCATGCCATCCGCACGGTaGACTTGCCTGTCCCACCCA +
Preference number: 4 (lower is better)
Translates to: HSWPAGSELGATPGFLLSMPSAR*TCLSHP
Trigger: TGGGTGGGACAGGCAAGTTCACCGTGCGGATGGCAT...GGAAAGCAGAAAACCTGGTGTGGCTCCCAGCTCACTTCCTGCTGGCCAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp TGGAGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACACTGAGCCCCTGCTCTaGGCACTCATCCACATCAGT +
Preference number: 4 (lower is better)
Translates to: WRQCELPLSWLITSLHPHTEPLL*ALIHIS
Trigger: ACTGATGTGGATGAGTGCTCAGAGCAGGGGCTCAGT...GTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp CACTCCTGGCCAGCAGGAAGTGAGCTGGGAGCCACACCAGGTTTTCTGCTTTCCTGGCTCACAGGAGCCTaGGGAGCACTCACAGTACCA +
Preference number: 4 (lower is better)
Translates to: HSWPAGSELGATPGFLLSWLTGA*GALTVP
Trigger: TGGTACTGTGAGTGCTCCCCAGGCTCCTGTGAGCCA...GGAAAGCAGAAAACCTGGTGTGGCTCCCAGCTCACTTCCTGCTGGCCAGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp AGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACTCCGTATTGCAGGGGTCTTaGCACACCAGCTTTCCATCC +
Preference number: 4 (lower is better)
Translates to: RQCELPLSWLITSLHPHSVLQGS*HTSFPS
Trigger: GGATGGAAAGCTGGTGTGTCAAGACCCCTGCAATAC...GGAGTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp CACTCCTGGCCAGCAGGAAGTGAGCTGGGAGCCACACCAGGTTTTCTGCTTTCCGGGAGGTCTTCAGGCTaGCTTTCATGTCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: HSWPAGSELGATPGFLLSGRSSG*LSCPEG
Trigger: ACCCTCTGGACATGAAAGTCAGCCTGAAGACCTCCC...GGAAAGCAGAAAACCTGGTGTGGCTCCCAGCTCACTTCCTGCTGGCCAGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp AGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACTCCCAGTTACTGAGCCCCTaGTCTGAGCACTCATCCACA +
Preference number: 4 (lower is better)
Translates to: RQCELPLSWLITSLHPHSQLLSP*SEHSST
Trigger: TGTGGATGAGTGCTCAGAGCAGGGGCTCAGTAACTG...GGAGTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp TGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACTCCTGGCCACCCCATCCAGCATGGTaGCCACATACAGAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: CELPLSWLITSLHPHSWPPHPAW*PHTEKP
Trigger: AGGCTTTTCTGTATGTGGGCACCATGCTGGATGGGG...TGGCCAGGAGTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp TGGAGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACACAACAGCAGCCAGATaGTCAGGAGCCTCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: WRQCELPLSWLITSLHPHTTAAR*SGASSC
Trigger: GCAACTTGAGGCTCCTGAGCATCTGGCTGCTGTTGT...GTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp TGGAGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACGGGTGTTGCTGTAGGTaGCATGGGTTTCGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: WRQCELPLSWLITSLHPHGCCCR*HGFRFS
Trigger: GGAGAAACGAAACCCATGCCACCTACAGCAACACCC...GTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp AGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACTCCGGGTGTTGCTGTAGGTaGCATGGGTTTCGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RQCELPLSWLITSLHPHSGCCCR*HGFRFS
Trigger: GGAGAAACGAAACCCATGCCACCTACAGCAACACCC...GGAGTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp AGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACTCCGAAGATCAAAGTGGCTaGGGGAAACAACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RQCELPLSWLITSLHPHSEDQSG*GKQQQP
Trigger: TGGCTGCTGTTGTTTCCCTCAGCCACTTTGATCTTC...GGAGTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp GCAAGCTGGAGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATAGGGCTCTGGAACAATaGCATCCGCACGGTGAACTT +
Preference number: 4 (lower is better)
Translates to: ASWRQCELPLSWLITSLHRALEQ*HPHGEL
Trigger: AAGTTCACCGTGCGGATGGCATTGTTCCAGAGCCCT...ATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCTCCAGCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp CACTCCTGGCCAGCAGGAAGTGAGCTGGGAGCCACACCAGGTTTTCTGCTTTCCCTGTGGAGTTGCTACTaGGTGTGGCATAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: HSWPAGSELGATPGFLLSLWSCY*VWHSSW
Trigger: CCAACTGCTATGCCACACCCAGTAGCAACTCCACAG...GGAAAGCAGAAAACCTGGTGTGGCTCCCAGCTCACTTCCTGCTGGCCAGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp TGGAGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACCACCTTGTCGTGTTATaGGACCCAAGTTCAGGACAC +
Preference number: 4 (lower is better)
Translates to: WRQCELPLSWLITSLHPHHLVVL*DPSSGH
Trigger: GTGTCCTGAACTTGGGTCCCATAACACGACAAGGTG...GTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp AGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACTCCACTCTCACTGAAGCCTaGGCATTGTCTGTCATTCAG +
Preference number: 4 (lower is better)
Translates to: RQCELPLSWLITSLHPHSTLTEA*ALSVIQ
Trigger: CTGAATGACAGACAATGCTCAGGCTTCAGTGAGAGT...GGAGTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp GCAAGCTGGAGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCAAACTCTGTAGCTaGCACTTTCTGAGGGACATC +
Preference number: 4 (lower is better)
Translates to: ASWRQCELPLSWLITSLHPKLCS*HFLRDI
Trigger: GATGTCCCTCAGAAAGTGCCAGCTACAGAGTTTGGG...ATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCTCCAGCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp AGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACTCCATTGGGAGACATCTGTaGTGTTGGAGTCCTGTTTAC +
Preference number: 4 (lower is better)
Translates to: RQCELPLSWLITSLHPHSIGRHL*CWSPVY
Trigger: GTAAACAGGACTCCAACATCACAGATGTCTCCCAAT...GGAGTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp TCCCACCATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCATTGAGCCACATGGGTaGCGCCGTGTTGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: SHHVMPSTTDSAHSNCVFIEPHG*RRVASQ
Trigger: CTGCGATGCAACACGGCGGCACCCATGTGGCTCAAT...GAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATGGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp ATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTAACGACTTGTTTCCATCCGGGCCCTaGGGCAAGCAGTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: MPSTTDSAHSNCVFCNDLFPSGP*GKQSSP
Trigger: AGGACTGGACTGCTTGCCCCAGGGCCCGGATGGAAA...CAAGTCGTTACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp TGGAGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACAGTTGCTACTGGGTGTaGCATAGCAGTTGGTCATTA +
Preference number: 4 (lower is better)
Translates to: WRQCELPLSWLITSLHPHSCYWV*HSSWSL
Trigger: TAATGACCAACTGCTATGCCACACCCAGTAGCAACT...GTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR CAA 72 bp CCCAAACTCTGTAGCTGGCACTTTCTGAGGGACATCTaGATGTCATTGGCCCCACACTCCAGCCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: PKLCSWHFLRDI*MSLAPHSSLYS
Trigger: GGAGTACAGGCTGGAGTGTGGGGCCAATGACATCAAGATGTCCCTCAGAAAGTGCCAGCTACAGAGTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
CDS-3UTR TCA 90 bp ATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTAACGACTTGAGTCGCCTTCTGTGTTaGCACAGGTGGCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: MPSTTDSAHSNCVFCNDLSRLLC*HRWPGH
Trigger: ATGCCCTGGCCACCTGTGTCAACACAGAAGGCGACT...CAAGTCGTTACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp ATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTAACGACTTGATTGAGCCACATGGGTaGCGCCGTGTTGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: MPSTTDSAHSNCVFCNDLIEPHG*RRVASQ
Trigger: CTGCGATGCAACACGGCGGCACCCATGTGGCTCAAT...CAAGTCGTTACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp CACTCCTGGCCAGCAGGAAGTGAGCTGGGAGCCACACCAGGTTTTCTGCTTTCCAATGATGATCGCATTTaGCAGGTAGAGGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: HSWPAGSELGATPGFLLSNDDRI*QVEGVA
Trigger: AGCAACACCCTCTACCTGGCAAATGCGATCATCATT...GGAAAGCAGAAAACCTGGTGTGGCTCCCAGCTCACTTCCTGCTGGCCAGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp CACCATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTTGGCTCACAGGAGCCTaGGGAGCACTCACAGTACCA +
Preference number: 4 (lower is better)
Translates to: HHVMPSTTDSAHSNCVFCWLTGA*GALTVP
Trigger: TGGTACTGTGAGTGCTCCCCAGGCTCCTGTGAGCCA...ACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR CAA 72 bp TGTAGCTGGCACTTTCTGAGGGACATCTTGATGTCATaGGCCCCACACTCCAGCCTGTACTCCAATTGGGAG +
Preference number: 4 (lower is better)
Translates to: CSWHFLRDILMS*APHSSLYSNWE
Trigger: CTCCCAATTGGAGTACAGGCTGGAGTGTGGGGCCAATGACATCAAGATGTCCCTCAGAAAGTGCCAGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
CDS-3UTR TCA 90 bp CACCATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTCCGTCTCGCTTCTGTTaGGTTACTGGCTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: HHVMPSTTDSAHSNCVFCPSRFC*VTGFSQ
Trigger: CTGGCTGAAGCCAGTAACTCAACAGAAGCGAGACGG...ACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp TCCCACCATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCGGGTGTTCACACAGCTaGTGTTGGAGCAGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: SHHVMPSTTDSAHSNCVFGCSHS*CWSSCE
Trigger: CTCACAACTGCTCCAACAGCAGCTGTGTGAACACCC...GAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATGGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp TCCCACCATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCCAGTTACTGAGCCCCTaGTCTGAGCACTCATCCACA +
Preference number: 4 (lower is better)
Translates to: SHHVMPSTTDSAHSNCVFQLLSP*SEHSST
Trigger: TGTGGATGAGTGCTCAGAGCAGGGGCTCAGTAACTG...GAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp AGGCAGTGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACTCCCGTGGACAACTGTCCTaGATAATGAAGTATTTCACA +
Preference number: 4 (lower is better)
Translates to: RQCELPLSWLITSLHPHSRGQLS*IMKYFT
Trigger: TGTGAAATACTTCATTATCCAGGACAGTTGTCCACG...GGAGTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACACTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp CATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTAACTGCTGGAAGCAGCCTTaGACACTGAGGCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: HVMPSTTDSAHSNCVFCNCWKQP*TLRPGH
Trigger: GTGTCCAGGCCTCAGTGTCCAAGGCTGCTTCCAGCA...GTTACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp CCTGAGCATTGTCTGTCATTCAGGTACATGAAGACATTCATAAAGCCCAAACTCGGCAGGAGCACGTTGTaGCCACACCATCCACCGTGC +
Preference number: 4 (lower is better)
Translates to: PEHCLSFRYMKTFIKPKLGRSTL*PHHPPC
Trigger: GCACGGTGGATGGTGTGGTCACAACGTGCTCCTGCC...GAGTTTGGGCTTTATGAATGTCTTCATGTACCTGAATGACAGACAATGCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
CDS-3UTR TCA 90 bp TCCCACCATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCACAGAAAATCGGGCCTaGGATGACTCGCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: SHHVMPSTTDSAHSNCVFTENRA*DDSPFS
Trigger: AGAGAATGGCGAGTCATCTCAGGCCCGATTTTCTGT...GAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp ATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTAACGACTTGACTCATCCACATCAGTaGAGCTCAGCTCAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: MPSTTDSAHSNCVFCNDLTHPHQ*SSAQAS
Trigger: TGACGCCTGAGCTGAGCTGCACTGATGTGGATGAGT...CAAGTCGTTACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp CATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTAACGGGTGTTCACACAGCTaGTGTTGGAGCAGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: HVMPSTTDSAHSNCVFCNGCSHS*CWSSCE
Trigger: CTCACAACTGCTCCAACAGCAGCTGTGTGAACACCC...GTTACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR CAA 72 bp GATGTCATTGGCCCCACACTCCAGCCTGTACTCCAATaGGGAGACATCTGTGATGTTGGAGTCCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: DVIGPTLQPVLQ*GDICDVGVLFT
Trigger: TGTAAACAGGACTCCAACATCACAGATGTCTCCCAATTGGAGTACAGGCTGGAGTGTGGGGCCAATGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
CDS-3UTR TCA 90 bp ATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTAACGACTTGACTCTCACTGAAGCCTaGGCATTGTCTGTCATTCAG +
Preference number: 4 (lower is better)
Translates to: MPSTTDSAHSNCVFCNDLTLTEA*ALSVIQ
Trigger: CTGAATGACAGACAATGCTCAGGCTTCAGTGAGAGT...CAAGTCGTTACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp TGCCACATTCCTTCAGGAGACAGGGGCTTCATACATATCACATTTGAAGGAAGACACCATACTCTGTGCTaGGCCAGTACTCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: CHIPSGDRGFIHITFEGRHHTLC*ASTQSG
Trigger: CCCTGACTGAGTACTGGCGCAGCACAGAGTATGGTG...TCTTCCTTCAAATGTGATATGTATGAAGCCCCTGTCTCCTGAAGGAATGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp ACATTTGAAGGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGTGAGGTTTCCATCCGGGCCCTaGGGCAAGCAGTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: TFEGRTALKDANLFLMVRFPSGP*GKQSSP
Trigger: AGGACTGGACTGCTTGCCCCAGGGCCCGGATGGAAA...CCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCCTTCAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp CACCATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTACAGAAAAGCCTCAGTaGACAGCATCACAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: HHVMPSTTDSAHSNCVFCTEKPQ*TASQKD
Trigger: GTCCTTCTGTGATGCTGTCCACTGAGGCTTTTCTGT...ACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp CATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTAACCACCTTGTCGTGTTATaGGACCCAAGTTCAGGACAC +
Preference number: 4 (lower is better)
Translates to: HVMPSTTDSAHSNCVFCNHLVVL*DPSSGH
Trigger: GTGTCCTGAACTTGGGTCCCATAACACGACAAGGTG...GTTACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp CCATCTGCCGTTATCCGATATGCAATCTTCATCTACCCTGCATTCTTCGCAAGTAATATAGAAGCCACCTaGGCAAGCCCGGGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: PSAVIRYAIFIYPAFFASNIEAT*ASPGCS
Trigger: TGAACACCCCGGGCTTGCCCAGGTGGCTTCTATATT...ACTTGCGAAGAATGCAGGGTAGATGAAGATTGCATATCGGATAACGGCAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
CDS-3UTR TCA 90 bp AAAGATGCCAACTTGTTTTTGATGGTGAGGATTAAAGAAAGAGTACGTGCAAGCATGCCATCCGCACGGTaGACTTGCCTGTCCCACCCA +
Preference number: 4 (lower is better)
Translates to: KDANLFLMVRIKERVRASMPSAR*TCLSHP
Trigger: TGGGTGGGACAGGCAAGTTCACCGTGCGGATGGCAT...GCTTGCACGTACTCTTTCTTTAATCCTCACCATCAAAAACAAGTTGGCATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp GTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGCCTAGTTTCTTAGAGAGTGTGCACAGGCCGTaGGGCTCACAATGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: VSHLRSHSRTCIEPSFLESVHRP*GSQCLH
Trigger: GTGAAGGCATTGTGAGCCGCACGGCCTGTGCACACT...CTCTAAGAAACTAGGCTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp CACCATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTAAGGTCGTAGTTTCCTaGAAACCGGAACATCTGAAC +
Preference number: 4 (lower is better)
Translates to: HHVMPSTTDSAHSNCVFCKVVVS*KPEHLN
Trigger: GTTCAGATGTTCCGGTTTGCAGGAAACTACGACCTT...ACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp TGCCACATTCCTTCAGGAGACAGGGGCTTCATACATATCACATTTGAAGGAAGATCAGGAGCCTCAAGTTaGTGGAAGCAGCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: CHIPSGDRGFIHITFEGRSGASS*WKQPWT
Trigger: TGTCCAAGGCTGCTTCCAGCAACTTGAGGCTCCTGA...TCTTCCTTCAAATGTGATATGTATGAAGCCCCTGTCTCCTGAAGGAATGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp TGCCACATTCCTTCAGGAGACAGGGGCTTCATACATATCACATTTGAAGGAAGAGAAGATCAAAGTGGCTaGGGGAAACAACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: CHIPSGDRGFIHITFEGREDQSG*GKQQQP
Trigger: TGGCTGCTGTTGTTTCCCTCAGCCACTTTGATCTTC...TCTTCCTTCAAATGTGATATGTATGAAGCCCCTGTCTCCTGAAGGAATGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp CCTGAGCATTGTCTGTCATTCAGGTACATGAAGACATTCATAAAGCCCAAACTCGGGTGTTCACACAGCTaGTGTTGGAGCAGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: PEHCLSFRYMKTFIKPKLGCSHS*CWSSCE
Trigger: CTCACAACTGCTCCAACAGCAGCTGTGTGAACACCC...GAGTTTGGGCTTTATGAATGTCTTCATGTACCTGAATGACAGACAATGCTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
CDS-3UTR GCA 90 bp ACATTTGAAGGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGTGAGGCACCATACTCTGTGCTaGGCCAGTACTCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TFEGRTALKDANLFLMVRHHTLC*ASTQSG
Trigger: CCCTGACTGAGTACTGGCGCAGCACAGAGTATGGTG...CCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCCTTCAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp GTTCATATACATTGTGTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGGGGCAAGCCTTCACCTaGATCTCTGTGGACCACCGG +
Preference number: 4 (lower is better)
Translates to: VHIHCVSHLRSHSRTCIEGQAFT*ISVDHR
Trigger: CCGGTGGTCCACAGAGATCCAGGTGAAGGCTTGCCC...CTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACACACAATGTATATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp CATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTAACAGTTGCTACTGGGTGTaGCATAGCAGTTGGTCATTA +
Preference number: 4 (lower is better)
Translates to: HVMPSTTDSAHSNCVFCNSCYWV*HSSWSL
Trigger: TAATGACCAACTGCTATGCCACACCCAGTAGCAACT...GTTACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp AAAGATGCCAACTTGTTTTTGATGGTGAGGATTAAAGAAAGAGTACGTGCAAGCCCGTCTCGCTTCTGTTaGGTTACTGGCTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KDANLFLMVRIKERVRASPSRFC*VTGFSQ
Trigger: CTGGCTGAAGCCAGTAACTCAACAGAAGCGAGACGG...GCTTGCACGTACTCTTTCTTTAATCCTCACCATCAAAAACAAGTTGGCATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp GCATCTATGAAGTCCATAAAGATAGAGAAAGGATCTGTTTTATTCCCACCATGTAGTCGCCTTCTGTGTTaGCACAGGTGGCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: ASMKSIKIEKGSVLFPPCSRLLC*HRWPGH
Trigger: ATGCCCTGGCCACCTGTGTCAACACAGAAGGCGACT...ACATGGTGGGAATAAAACAGATCCTTTCTCTATCTTTATGGACTTCATAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp ACATTTGAAGGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGTGAGGGTATTGCAGGGGTCTTaGCACACCAGCTTTCCATCC +
Preference number: 4 (lower is better)
Translates to: TFEGRTALKDANLFLMVRVLQGS*HTSFPS
Trigger: GGATGGAAAGCTGGTGTGTCAAGACCCCTGCAATAC...CCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCCTTCAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp GGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGTGAGGATTAAAGAAGGGAGGTCTTCAGGCTaGCTTTCATGTCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GRTALKDANLFLMVRIKEGRSSG*LSCPEG
Trigger: ACCCTCTGGACATGAAAGTCAGCCTGAAGACCTCCC...TTCTTTAATCCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp GTTCATATACATTGTGTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGAGTGTGCACAGGCCGTaGGGCTCACAATGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: VHIHCVSHLRSHSRTCIESVHRP*GSQCLH
Trigger: GTGAAGGCATTGTGAGCCGCACGGCCTGTGCACACT...CTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACACACAATGTATATGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp AAAGATGCCAACTTGTTTTTGATGGTGAGGATTAAAGAAAGAGTACGTGCAAGCTGCAGTAAGCCAGATTaGACTCAGGGGGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: KDANLFLMVRIKERVRASCSKPD*TQGALS
Trigger: TGACAGCGCCCCCTGAGTGCAATCTGGCTTACTGCA...GCTTGCACGTACTCTTTCTTTAATCCTCACCATCAAAAACAAGTTGGCATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp TGCCACATTCCTTCAGGAGACAGGGGCTTCATACATATCACATTTGAAGGAAGAACAGAAAAGCCTCAGTaGACAGCATCACAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: CHIPSGDRGFIHITFEGRTEKPQ*TASQKD
Trigger: GTCCTTCTGTGATGCTGTCCACTGAGGCTTTTCTGT...TCTTCCTTCAAATGTGATATGTATGAAGCCCCTGTCTCCTGAAGGAATGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp ACATTTGAAGGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGTGAGGCACCCCCATCCAGCATaGTGCCCACATACAGAAAAG +
Preference number: 4 (lower is better)
Translates to: TFEGRTALKDANLFLMVRHPHPA*CPHTEK
Trigger: CTTTTCTGTATGTGGGCACCATGCTGGATGGGGGTG...CCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCCTTCAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp GCATCTATGAAGTCCATAAAGATAGAGAAAGGATCTGTTTTATTCCCACCATGTTGCTGGAAGCAGCCTTaGACACTGAGGCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: ASMKSIKIEKGSVLFPPCCWKQP*TLRPGH
Trigger: GTGTCCAGGCCTCAGTGTCCAAGGCTGCTTCCAGCA...ACATGGTGGGAATAAAACAGATCCTTTCTCTATCTTTATGGACTTCATAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp GTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGCCTAGTTTCTTAGAGACAGAAAATCGGGCCTaGGATGACTCGCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: VSHLRSHSRTCIEPSFLETENRA*DDSPFS
Trigger: AGAGAATGGCGAGTCATCTCAGGCCCGATTTTCTGT...CTCTAAGAAACTAGGCTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp GTTCATATACATTGTGTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGCAGGGTCTGTGGAGTTaGTACTGGGTGTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: VHIHCVSHLRSHSRTCIEQGLWS*YWVWHS
Trigger: GCTATGCCACACCCAGTAGCAACTCCACAGACCCTG...CTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACACACAATGTATATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp GGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGTGAGGATTAAAGAATCAGGAGCCTCAAGTTaGTGGAAGCAGCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: GRTALKDANLFLMVRIKESGASS*WKQPWT
Trigger: TGTCCAAGGCTGCTTCCAGCAACTTGAGGCTCCTGA...TTCTTTAATCCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp AAAGATGCCAACTTGTTTTTGATGGTGAGGATTAAAGAAAGAGTACGTGCAAGCACAACAGCAGCCAGATaGTCAGGAGCCTCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: KDANLFLMVRIKERVRASTTAAR*SGASSC
Trigger: GCAACTTGAGGCTCCTGAGCATCTGGCTGCTGTTGT...GCTTGCACGTACTCTTTCTTTAATCCTCACCATCAAAAACAAGTTGGCATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp ACATTTGAAGGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGTGAGGCCCAAACTCTGTAGCTaGCACTTTCTGAGGGACATC +
Preference number: 4 (lower is better)
Translates to: TFEGRTALKDANLFLMVRPKLCS*HFLRDI
Trigger: GATGTCCCTCAGAAAGTGCCAGCTACAGAGTTTGGG...CCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCCTTCAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp AAAGATGCCAACTTGTTTTTGATGGTGAGGATTAAAGAAAGAGTACGTGCAAGCCACCCCCATCCAGCATaGTGCCCACATACAGAAAAG +
Preference number: 4 (lower is better)
Translates to: KDANLFLMVRIKERVRASHPHPA*CPHTEK
Trigger: CTTTTCTGTATGTGGGCACCATGCTGGATGGGGGTG...GCTTGCACGTACTCTTTCTTTAATCCTCACCATCAAAAACAAGTTGGCATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp GTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGCCTAGTTTCTTAGAGATTTCACAGGGTCTGTaGAGTTGCTACTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: VSHLRSHSRTCIEPSFLEISQGL*SCYWVW
Trigger: CCACACCCAGTAGCAACTCCACAGACCCTGTGAAAT...CTCTAAGAAACTAGGCTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp ACATTTGAAGGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGTGAGGTTGGACACTGAGGCCTaGACACCTTGTCGTGTTATG +
Preference number: 4 (lower is better)
Translates to: TFEGRTALKDANLFLMVRLDTEA*TPCRVM
Trigger: CATAACACGACAAGGTGTCCAGGCCTCAGTGTCCAA...CCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCCTTCAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp GTTCATATACATTGTGTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGACTCATCCACATCAGTaGAGCTCAGCTCAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: VHIHCVSHLRSHSRTCIETHPHQ*SSAQAS
Trigger: TGACGCCTGAGCTGAGCTGCACTGATGTGGATGAGT...CTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACACACAATGTATATGAAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp AAGTTCATATACATTGTGTGTCTCATCTTAGATCACATAGCAGAACATGCATTGTGCAGTAAGCCAGATTaGACTCAGGGGGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: KFIYIVCLILDHIAEHALCSKPD*TQGALS
Trigger: TGACAGCGCCCCCTGAGTGCAATCTGGCTTACTGCA...CAATGCATGTTCTGCTATGTGATCTAAGATGAGACACACAATGTATATGAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp ATGAAGTCCATAAAGATAGAGAAAGGATCTGTTTTATTCCCACCATGTAATGCCCCCCATCCAGCATGGTaGCCACATACAGAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: MKSIKIEKGSVLFPPCNAPHPAW*PHTEKP
Trigger: AGGCTTTTCTGTATGTGGGCACCATGCTGGATGGGG...GGCATTACATGGTGGGAATAAAACAGATCCTTTCTCTATCTTTATGGACTTCAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp ACATTTGAAGGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGTGAGGAATATAGAAGCCACCTaGGCAAGCCTTCACCTGGAT +
Preference number: 4 (lower is better)
Translates to: TFEGRTALKDANLFLMVRNIEAT*ASLHLD
Trigger: ATCCAGGTGAAGGCTTGCCCAGGTGGCTTCTATATT...CCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCCTTCAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp GTTCATATACATTGTGTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGCTGTGGAGTTGCTACTaGGTGTGGCATAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: VHIHCVSHLRSHSRTCIELWSCY*VWHSSW
Trigger: CCAACTGCTATGCCACACCCAGTAGCAACTCCACAG...CTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACACACAATGTATATGAAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp GGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGTGAGGATTAAAGAATTGGACACTGAGGCCTaGACACCTTGTCGTGTTATG +
Preference number: 4 (lower is better)
Translates to: GRTALKDANLFLMVRIKELDTEA*TPCRVM
Trigger: CATAACACGACAAGGTGTCCAGGCCTCAGTGTCCAA...TTCTTTAATCCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR TCA 90 bp GTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGCCTAGTTTCTTAGAGATTGGGAGACATCTGTaGTGTTGGAGTCCTGTTTAC +
Preference number: 4 (lower is better)
Translates to: VSHLRSHSRTCIEPSFLEIGRHL*CWSPVY
Trigger: GTAAACAGGACTCCAACATCACAGATGTCTCCCAAT...CTCTAAGAAACTAGGCTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp AAGTTCATATACATTGTGTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGGGCTCTGGAACAATaGCATCCGCACGGTGAACTT +
Preference number: 4 (lower is better)
Translates to: KFIYIVCLILDHIAEHALRALEQ*HPHGEL
Trigger: AAGTTCACCGTGCGGATGGCATTGTTCCAGAGCCCT...CAATGCATGTTCTGCTATGTGATCTAAGATGAGACACACAATGTATATGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp ACATTTGAAGGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGTGAGGAGCCTGTACTCCAATTaGGAGACATCTGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: TFEGRTALKDANLFLMVRSLYSN*ETSVML
Trigger: CAACATCACAGATGTCTCCCAATTGGAGTACAGGCT...CCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCCTTCAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp ACATTTGAAGGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGTGAGGGTGTGGCATAGCAGTTaGTCATTAGCAGTACAAACC +
Preference number: 4 (lower is better)
Translates to: TFEGRTALKDANLFLMVRVWHSS*SLAVQT
Trigger: GGTTTGTACTGCTAATGACCAACTGCTATGCCACAC...CCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCCTTCAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR CAA 72 bp GAAGGAAGAACAGCACTGAAAGATGCCAACTTGTTTTaGATGGTGAGGATTAAAGAAAGAGTACGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: EGRTALKDANLF*MVRIKERVRAS
Trigger: GCTTGCACGTACTCTTTCTTTAATCCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp AAGTTCATATACATTGTGTGTCTCATCTTAGATCACATAGCAGAACATGCATTGATTTCACAGGGTCTGTaGAGTTGCTACTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: KFIYIVCLILDHIAEHALISQGL*SCYWVW
Trigger: CCACACCCAGTAGCAACTCCACAGACCCTGTGAAAT...CAATGCATGTTCTGCTATGTGATCTAAGATGAGACACACAATGTATATGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp GTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGCCTAGTTTCTTAGAGTCTCTGTCACCTGAATaGTTGTATCTTCTGTACGTG +
Preference number: 4 (lower is better)
Translates to: VSHLRSHSRTCIEPSFLESLSPE*LYLLYV
Trigger: CACGTACAGAAGATACAACCATTCAGGTGACAGAGA...CTCTAAGAAACTAGGCTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp GTTCATATACATTGTGTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGAATGATGATCGCATTTaGCAGGTAGAGGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: VHIHCVSHLRSHSRTCIENDDRI*QVEGVA
Trigger: AGCAACACCCTCTACCTGGCAAATGCGATCATCATT...CTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACACACAATGTATATGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR GCA 90 bp GCATCTATGAAGTCCATAAAGATAGAGAAAGGATCTGTTTTATTCCCACCATGTAAGGTCGTAGTTTCCTaGAAACCGGAACATCTGAAC +
Preference number: 4 (lower is better)
Translates to: ASMKSIKIEKGSVLFPPCKVVVS*KPEHLN
Trigger: GTTCAGATGTTCCGGTTTGCAGGAAACTACGACCTT...ACATGGTGGGAATAAAACAGATCCTTTCTCTATCTTTATGGACTTCATAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp GCATCTATGAAGTCCATAAAGATAGAGAAAGGATCTGTTTTATTCCCACCATGTAGCCTGTACTCCAATTaGGAGACATCTGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: ASMKSIKIEKGSVLFPPCSLYSN*ETSVML
Trigger: CAACATCACAGATGTCTCCCAATTGGAGTACAGGCT...ACATGGTGGGAATAAAACAGATCCTTTCTCTATCTTTATGGACTTCATAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp GGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGTGAGGATTAAAGAATCTCTGTCACCTGAATaGTTGTATCTTCTGTACGTG +
Preference number: 4 (lower is better)
Translates to: GRTALKDANLFLMVRIKESLSPE*LYLLYV
Trigger: CACGTACAGAAGATACAACCATTCAGGTGACAGAGA...TTCTTTAATCCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp AAGTTCATATACATTGTGTGTCTCATCTTAGATCACATAGCAGAACATGCATTGGTGTGGCATAGCAGTTaGTCATTAGCAGTACAAACC +
Preference number: 4 (lower is better)
Translates to: KFIYIVCLILDHIAEHALVWHSS*SLAVQT
Trigger: GGTTTGTACTGCTAATGACCAACTGCTATGCCACAC...CAATGCATGTTCTGCTATGTGATCTAAGATGAGACACACAATGTATATGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CCA 90 bp ATGAAGTCCATAAAGATAGAGAAAGGATCTGTTTTATTCCCACCATGTAATGCCCGTGGACAACTGTCCTaGATAATGAAGTATTTCACA +
Preference number: 4 (lower is better)
Translates to: MKSIKIEKGSVLFPPCNARGQLS*IMKYFT
Trigger: TGTGAAATACTTCATTATCCAGGACAGTTGTCCACG...GGCATTACATGGTGGGAATAAAACAGATCCTTTCTCTATCTTTATGGACTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
3UTR CAA 72 bp ACATTTGAAGGAAGAACAGCACTGAAAGATGCCAACTaGTTTTTGATGGTGAGGATTAAAGAAAGAGTACGT +
Preference number: 4 (lower is better)
Translates to: TFEGRTALKDAN*FLMVRIKERVR
Trigger: ACGTACTCTTTCTTTAATCCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCCTTCAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS TCA 90 bp GGACGGGCACACAGGTCTCAGCCATGCGAACGCCACCCTGGCCTGTaGACCGGTACCAGCCGTGCAGACCCGCGTCACAGGAGTAGCCCA +
Preference number: 5 (lower is better)
Translates to: GRAHRSQPCERHPGL*TGTSRADPRHRSSP
Trigger: TGGGCTACTCCTGTGACGCGGGTCTGCACGGCTGGTACCGGTTCACAGGCCAGGGTGGCGTTCGCATGGCTGAGACCTGTGTGCCCGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 90 bp CATCGCAGGACGGGCACACAGGTCTCAGCCATGCGAACGCCACCCTaGCCTGTGAACCGGTACCAGCCGTGCAGACCCGCGTCACAGGAG +
Preference number: 5 (lower is better)
Translates to: HRRTGTQVSAMRTPP*PVNRYQPCRPASQE
Trigger: CTCCTGTGACGCGGGTCTGCACGGCTGGTACCGGTTCACAGGCCAGGGTGGCGTTCGCATGGCTGAGACCTGTGTGCCCGTCCTGCGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 90 bp ATCCGGGCCCTGGGGCAAGCAGTCCAGTCCTGGCTCACAGGAGCCTaGGGAGCACTCACAGTACCAACCATCCCCTGTAAAGCCCTCGGG +
Preference number: 5 (lower is better)
Translates to: IRALGQAVQSWLTGA*GALTVPTIPCKALG
Trigger: CCCGAGGGCTTTACAGGGGATGGTTGGTACTGTGAGTGCTCCCCAGGCTCCTGTGAGCCAGGACTGGACTGCTTGCCCCAGGGCCCGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033263.6
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS CCA 90 bp ACACACCAGCTTTCCATCCGGGCCCTGGGGCAAGCAGTCCAGTCCTaGCTCACAGGAGCCTGGGGAGCACTCACAGTACCAACCATCCCC +
Preference number: 5 (lower is better)
Translates to: THQLSIRALGQAVQS*LTGAWGALTVPTIP
Trigger: GGGGATGGTTGGTACTGTGAGTGCTCCCCAGGCTCCTGTGAGCCAGGACTGGACTGCTTGCCCCAGGGCCCGGATGGAAAGCTGGTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033263.6
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS TCA 90 bp CCGTGCGGCTCACAATGCCTTCACTACTCGAGGGATGAGAGCCATTaGGCCACATGGGTGCCGCCGTGTTGCATCGCAGGACGGGCACAC +
Preference number: 5 (lower is better)
Translates to: PCGSQCLHYSRDESH*ATWVPPCCIAGRAH
Trigger: GTGTGCCCGTCCTGCGATGCAACACGGCGGCACCCATGTGGCTCAATGGCTCTCATCCCTCGAGTAGTGAAGGCATTGTGAGCCGCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 90 bp CCTGGGCAAGCCTTCACCTGGATCTCTGTGGACCACCGGCAGCATTaGTCGCTCCAGTGTGCACAGGCCGTGCGGCTCACAATGCCTTCA +
Preference number: 5 (lower is better)
Translates to: PGQAFTWISVDHRQH*SLQCAQAVRLTMPS
Trigger: TGAAGGCATTGTGAGCCGCACGGCCTGTGCACACTGGAGCGACCAATGCTGCCGGTGGTCCACAGAGATCCAGGTGAAGGCTTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 90 bp TCATCCATGTCCTCACACACCAGCCCATCACCAGTGAAGCCGGTCTaGCAGGAGCACGTTGTGACCACACCATCCACCGTGCAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: SSMSSHTSPSPVKPV*QEHVVTTPSTVQVA
Trigger: CGCCACCTGCACGGTGGATGGTGTGGTCACAACGTGCTCCTGCCAGACCGGCTTCACTGGTGATGGGCTGGTGTGTGAGGACATGGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000033263.6
ENSMUST00000207261.2
ENSMUST00000207378.2
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS TCA 90 bp CTGGGCAAGCCCGGGGTGTTCACACAGCTGCTGTTGGAGCAGTTGTaGGTCCATGGGGTAGCACACTCATCCATGTCCTCACACACCAGC +
Preference number: 5 (lower is better)
Translates to: LGKPGVFTQLLLEQL*VHGVAHSSMSSHTS
Trigger: GCTGGTGTGTGAGGACATGGATGAGTGTGCTACCCCATGGACTCACAACTGCTCCAACAGCAGCTGTGTGAACACCCCGGGCTTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
CDS CCA 90 bp GCCCGGGGTGTTCACACAGCTGCTGTTGGAGCAGTTGTGAGTCCATaGGGTAGCACACTCATCCATGTCCTCACACACCAGCCCATCACC +
Preference number: 5 (lower is better)
Translates to: ARGVHTAAVGAVVSP*GSTLIHVLTHQPIT
Trigger: GGTGATGGGCTGGTGTGTGAGGACATGGATGAGTGTGCTACCCCATGGACTCACAACTGCTCCAACAGCAGCTGTGTGAACACCCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000033263.6
ENSMUST00000207261.2
ENSMUST00000207378.2
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS GCA 90 bp AGCCGTGCAGACCCGCGTCACAGGAGTAGCCCACACCATACTCTGTaGTGCGCCAGTACTCAGTCAGGGTCTCATATGTATTGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: SRADPRHRSSPHHTL*CASTQSGSHMYCRG
Trigger: ACCCCTGCAATACATATGAGACCCTGACTGAGTACTGGCGCAGCACAGAGTATGGTGTGGGCTACTCCTGTGACGCGGGTCTGCACGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS GCA 90 bp TGGCTGAGGGAAACAACAGCAGCCAGATGCTCAGGAGCCTCAAGTTaGTGGAAGCAGCCTTGGACACTGAGGCCTGGACACCTTGTCGTG +
Preference number: 5 (lower is better)
Translates to: WLRETTAARCSGASS*WKQPWTLRPGHLVV
Trigger: CACGACAAGGTGTCCAGGCCTCAGTGTCCAAGGCTGCTTCCAGCAACTTGAGGCTCCTGAGCATCTGGCTGCTGTTGTTTCCCTCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 90 bp TGTAAATATAGAAGCCACCTGGGCAAGCCTTCACCTGGATCTCTGTaGACCACCGGCAGCATTGGTCGCTCCAGTGTGCACAGGCCGTGC +
Preference number: 5 (lower is better)
Translates to: CKYRSHLGKPSPGSL*TTGSIGRSSVHRPC
Trigger: GCACGGCCTGTGCACACTGGAGCGACCAATGCTGCCGGTGGTCCACAGAGATCCAGGTGAAGGCTTGCCCAGGTGGCTTCTATATTTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 90 bp CTCAGGAGCCTCAAGTTGCTGGAAGCAGCCTTGGACACTGAGGCCTaGACACCTTGTCGTGTTATGGGACCCAAGTTCAGGACACGGGTC +
Preference number: 5 (lower is better)
Translates to: LRSLKLLEAALDTEA*TPCRVMGPKFRTRV
Trigger: GACCCGTGTCCTGAACTTGGGTCCCATAACACGACAAGGTGTCCAGGCCTCAGTGTCCAAGGCTGCTTCCAGCAACTTGAGGCTCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp CACTCCTGGCCAGCAGGAAGTGAGCTGGGAGCCACACCAGGTTTTCTGCTTTCCGTGCAGGTGGCGTTGTaGTGGCATTCAGAACACCGT +
Preference number: 5 (lower is better)
Translates to: HSWPAGSELGATPGFLLSVQVAL*WHSEHR
Trigger: ACGGTGTTCTGAATGCCACAACAACGCCACCTGCAC...GGAAAGCAGAAAACCTGGTGTGGCTCCCAGCTCACTTCCTGCTGGCCAGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp CACTCCTGGCCAGCAGGAAGTGAGCTGGGAGCCACACCAGGTTTTCTGCTTTCCGACATCTTGATGTCATaGGCCCCACACTCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: HSWPAGSELGATPGFLLSDILMS*APHSSL
Trigger: CAGGCTGGAGTGTGGGGCCAATGACATCAAGATGTC...GGAAAGCAGAAAACCTGGTGTGGCTCCCAGCTCACTTCCTGCTGGCCAGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS TCA 90 bp TCCACATCAGTGCAGCTCAGCTCAGGCGTCAGACGAAAACCATCCTaGCAGGAGCACTTAAACGAGCCCGGGGTGTTCACACAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: STSVQLSSGVRRKPS*QEHLNEPGVFTQLL
Trigger: CAGCAGCTGTGTGAACACCCCGGGCTCGTTTAAGTGCTCCTGTCAGGATGGTTTTCGTCTGACGCCTGAGCTGAGCTGCACTGATGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033263.6
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS TCA 90 bp CCAGATGCTCAGGAGCCTCAAGTTGCTGGAAGCAGCCTTGGACACTaGGGCCTGGACACCTTGTCGTGTTATGGGACCCAAGTTCAGGAC +
Preference number: 5 (lower is better)
Translates to: PDAQEPQVAGSSLGH*GLDTLSCYGTQVQD
Trigger: GTCCTGAACTTGGGTCCCATAACACGACAAGGTGTCCAGGCCTCAGTGTCCAAGGCTGCTTCCAGCAACTTGAGGCTCCTGAGCATCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS GCA 90 bp CATACTCTGTGCTGCGCCAGTACTCAGTCAGGGTCTCATATGTATTaGAGGGGTCTTGACACACCAGCTTTCCATCCGGGCCCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: HTLCCASTQSGSHMY*RGLDTPAFHPGPGA
Trigger: TGCCCCAGGGCCCGGATGGAAAGCTGGTGTGTCAAGACCCCTGCAATACATATGAGACCCTGACTGAGTACTGGCGCAGCACAGAGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS GCA 90 bp CGTGCAGACCCGCGTCACAGGAGTAGCCCACACCATACTCTGTGCTaGGCCAGTACTCAGTCAGGGTCTCATATGTATTGCAGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: RADPRHRSSPHHTLC*ASTQSGSHMYCRGL
Trigger: AAGACCCCTGCAATACATATGAGACCCTGACTGAGTACTGGCGCAGCACAGAGTATGGTGTGGGCTACTCCTGTGACGCGGGTCTGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS GCA 90 bp AGAAGGACCTTGGTGGGGCTGTGTGTAGGTAGGGCTCTGGAACAATaGCATCCGCACGGTGAACTTGCCTGTCCCACCCAAGCTGATGTT +
Preference number: 5 (lower is better)
Translates to: RRTLVGLCVGRALEQ*HPHGELACPTQADV
Trigger: AACATCAGCTTGGGTGGGACAGGCAAGTTCACCGTGCGGATGGCATTGTTCCAGAGCCCTACCTACACACAGCCCCACCAAGGTCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 90 bp ACAGCAGCCAGATGCTCAGGAGCCTCAAGTTGCTGGAAGCAGCCTTaGACACTGAGGCCTGGACACCTTGTCGTGTTATGGGACCCAAGT +
Preference number: 5 (lower is better)
Translates to: TAARCSGASSCWKQP*TLRPGHLVVLWDPS
Trigger: ACTTGGGTCCCATAACACGACAAGGTGTCCAGGCCTCAGTGTCCAAGGCTGCTTCCAGCAACTTGAGGCTCCTGAGCATCTGGCTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp TGTGAGCTCCCTCTCTCCTGGCTGATAACCAGCCTGCATCCCCACTCCTGGCCATTTCTGAGGGACATCTaGATGTCATTGGCCCCACAC +
Preference number: 5 (lower is better)
Translates to: CELPLSWLITSLHPHSWPFLRDI*MSLAPH
Trigger: GTGTGGGGCCAATGACATCAAGATGTCCCTCAGAAA...TGGCCAGGAGTGGGGATGCAGGCTGGTTATCAGCCAGGAGAGAGGGAGCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS TCA 90 bp TTAAACGAGCCCGGGGTGTTCACACAGCTGCTGTTGGAGCAGTTGTaGGTCCATGGGGTAGCACACTCATCCATGTCCTCACACACCAGC +
Preference number: 5 (lower is better)
Translates to: LNEPGVFTQLLLEQL*VHGVAHSSMSSHTS
Trigger: GCTGGTGTGTGAGGACATGGATGAGTGTGCTACCCCATGGACTCACAACTGCTCCAACAGCAGCTGTGTGAACACCCCGGGCTCGTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033263.6
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp CACTCCTGGCCAGCAGGAAGTGAGCTGGGAGCCACACCAGGTTTTCTGCTTTCCTTTCTGAGGGACATCTaGATGTCATTGGCCCCACAC +
Preference number: 5 (lower is better)
Translates to: HSWPAGSELGATPGFLLSFLRDI*MSLAPH
Trigger: GTGTGGGGCCAATGACATCAAGATGTCCCTCAGAAA...GGAAAGCAGAAAACCTGGTGTGGCTCCCAGCTCACTTCCTGCTGGCCAGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 90 bp GAGCACGTTGTGACCACACCATCCACCGTGCAGGTGGCGTTGTTGTaGCATTCAGAACACCGTCTCGCTTCTGTTGAGTTACTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: EHVVTTPSTVQVALL*HSEHRLASVELLAS
Trigger: TGAAGCCAGTAACTCAACAGAAGCGAGACGGTGTTCTGAATGCCACAACAACGCCACCTGCACGGTGGATGGTGTGGTCACAACGTGCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033263.6
ENSMUST00000207261.2
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS CCA 90 bp ATTGCACTCAGGGGGCGCTGTCAAGTTGTAAATATAGAAGCCACCTaGGCAAGCCTTCACCTGGATCTCTGTGGACCACCGGCAGCATTG +
Preference number: 5 (lower is better)
Translates to: IALRGRCQVVNIEAT*ASLHLDLCGPPAAL
Trigger: CAATGCTGCCGGTGGTCCACAGAGATCCAGGTGAAGGCTTGCCCAGGTGGCTTCTATATTTACAACTTGACAGCGCCCCCTGAGTGCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp AGGGACATCTTGATGTCATTGGCCCCACACTCCAGCCTGTACTCCAATTGGGAGGTGCAGGTGGCGTTGTaGTGGCATTCAGAACACCGT +
Preference number: 5 (lower is better)
Translates to: RDILMSLAPHSSLYSNWEVQVAL*WHSEHR
Trigger: ACGGTGTTCTGAATGCCACAACAACGCCACCTGCAC...CTCCCAATTGGAGTACAGGCTGGAGTGTGGGGCCAATGACATCAAGATGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
CDS-3UTR CAA 90 bp CTCTGTAGCTGGCACTTTCTGAGGGACATCTTGATGTCATTGGCCCCACACTCCACCGTGCAGGTGGCGTaGTTGTGGCATTCAGAACAC +
Preference number: 5 (lower is better)
Translates to: LCSWHFLRDILMSLAPHSTVQVA*LWHSEH
Trigger: GTGTTCTGAATGCCACAACAACGCCACCTGCACGGT...GGAGTGTGGGGCCAATGACATCAAGATGTCCCTCAGAAAGTGCCAGCTACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207378.2
CDS-3UTR CAA 90 bp CATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTAACATCCGCACGGTGAACTaGCCTGTCCCACCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: HVMPSTTDSAHSNCVFCNIRTVN*PVPPKL
Trigger: CAGCTTGGGTGGGACAGGCAAGTTCACCGTGCGGAT...GTTACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp TCCCACCATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCCATCACAGAAGGACCTaGGTGGGGCTGTGTGTAGGT +
Preference number: 5 (lower is better)
Translates to: SHHVMPSTTDSAHSNCVFHHRRT*VGLCVG
Trigger: ACCTACACACAGCCCCACCAAGGTCCTTCTGTGATG...GAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS GCA 90 bp TCATTAGCAGTACAAACCGGGACAAGTCACCCCCATCCAGCATGGTaGCCACATACAGAAAAGCCTCAGTGGACAGCATCACAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: SLAVQTGTSHPHPAW*PHTEKPQWTASQKD
Trigger: GTCCTTCTGTGATGCTGTCCACTGAGGCTTTTCTGTATGTGGGCACCATGCTGGATGGGGGTGACTTGTCCCGGTTTGTACTGCTAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 90 bp CATGGGTTTCGTTTCTCCTCAATACTGTCCCACAGGGACCATTCCTaGCAGGGGTCACTATGGACATCCAGTCTCGTTCATCACTCTCAC +
Preference number: 5 (lower is better)
Translates to: HGFRFSSILSHRDHS*QGSLWTSSLVHHSH
Trigger: GTGAGAGTGATGAACGAGACTGGATGTCCATAGTGACCCCTGCCAGGAATGGTCCCTGTGGGACAGTATTGAGGAGAAACGAAACCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 90 bp TGGTCATTAGCAGTACAAACCGGGACAAGTCACCCCCATCCAGCATaGTGCCCACATACAGAAAAGCCTCAGTGGACAGCATCACAGAAG +
Preference number: 5 (lower is better)
Translates to: WSLAVQTGTSHPHPA*CPHTEKPQWTASQK
Trigger: CTTCTGTGATGCTGTCCACTGAGGCTTTTCTGTATGTGGGCACCATGCTGGATGGGGGTGACTTGTCCCGGTTTGTACTGCTAATGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 90 bp ATTTCACAGGGTCTGTGGAGTTGCTACTGGGTGTGGCATAGCAGTTaGTCATTAGCAGTACAAACCGGGACAAGTCACCCCCATCCAGCA +
Preference number: 5 (lower is better)
Translates to: ISQGLWSCYWVWHSS*SLAVQTGTSHPHPA
Trigger: TGCTGGATGGGGGTGACTTGTCCCGGTTTGTACTGCTAATGACCAACTGCTATGCCACACCCAGTAGCAACTCCACAGACCCTGTGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp CACCATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTACCGTGCAGGTGGCGTaGTTGTGGCATTCAGAACAC +
Preference number: 5 (lower is better)
Translates to: HHVMPSTTDSAHSNCVFCTVQVA*LWHSEH
Trigger: GTGTTCTGAATGCCACAACAACGCCACCTGCACGGT...ACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp TCCCACCATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCCAGCCTGTACTCCAATaGGGAGACATCTGTGATGTT +
Preference number: 5 (lower is better)
Translates to: SHHVMPSTTDSAHSNCVFQPVLQ*GDICDV
Trigger: AACATCACAGATGTCTCCCAATTGGAGTACAGGCTG...GAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATGGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS TCA 90 bp TGGACACCTTGTCGTGTTATGGGACCCAAGTTCAGGACACGGGTCTaGTCTATGAAGTTCCCACTTCGAAATCTAGTACCAGAGCAGGTA +
Preference number: 5 (lower is better)
Translates to: WTPCRVMGPKFRTRV*SMKFPLRNLVPEQV
Trigger: TACCTGCTCTGGTACTAGATTTCGAAGTGGGAACTTCATAGATCAGACCCGTGTCCTGAACTTGGGTCCCATAACACGACAAGGTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp ATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTAACGACTTGGAGACATCTGTGATGTaGGAGTCCTGTTTACACTGG +
Preference number: 5 (lower is better)
Translates to: MPSTTDSAHSNCVFCNDLETSVM*ESCLHW
Trigger: CCAGTGTAAACAGGACTCCAACATCACAGATGTCTC...CAAGTCGTTACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp CACCATGTAATGCCCAGCACAACAGACAGTGCTCACAGCAACTGTGTGTTCTGTGAGACATCTGTGATGTaGGAGTCCTGTTTACACTGG +
Preference number: 5 (lower is better)
Translates to: HHVMPSTTDSAHSNCVFCETSVM*ESCLHW
Trigger: CCAGTGTAAACAGGACTCCAACATCACAGATGTCTC...ACAGAACACACAGTTGCTGTGAGCACTGTCTGTTGTGCTGGGCATTACATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS TCA 90 bp GTTTCCTGCAAACCGGAACATCTGAACAGAAAATCGGGCCTGAGATaGCTCGCCATTCTCTGTCACCTGAATGGTTGTATCTTCTGTACG +
Preference number: 5 (lower is better)
Translates to: VSCKPEHLNRKSGLR*LAILCHLNGCIFCT
Trigger: CGTACAGAAGATACAACCATTCAGGTGACAGAGAATGGCGAGTCATCTCAGGCCCGATTTTCTGTTCAGATGTTCCGGTTTGCAGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp GTGTCTCATCTTAGATCACATAGCAGAACATGCATTGAGCCTAGTTTCTTAGAGCTCAGGAGCCTCAAGTaGCTGGAAGCAGCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: VSHLRSHSRTCIEPSFLELRSLK*LEAALD
Trigger: GTCCAAGGCTGCTTCCAGCAACTTGAGGCTCCTGAG...CTCTAAGAAACTAGGCTCAATGCATGTTCTGCTATGTGATCTAAGATGAGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp AAAGATGCCAACTTGTTTTTGATGGTGAGGATTAAAGAAAGAGTACGTGCAAGCCTCAGGAGCCTCAAGTaGCTGGAAGCAGCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: KDANLFLMVRIKERVRASLRSLK*LEAALD
Trigger: GTCCAAGGCTGCTTCCAGCAACTTGAGGCTCCTGAG...GCTTGCACGTACTCTTTCTTTAATCCTCACCATCAAAAACAAGTTGGCATCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS TCA 90 bp GGTCACTATGGACATCCAGTCTCGTTCATCACTCTCACTGAAGCCTaGGCATTGTCTGTCATTCAGGTACATGAAGACATTCATAAAGCC +
Preference number: 5 (lower is better)
Translates to: GHYGHPVSFITLTEA*ALSVIQVHEDIHKA
Trigger: GGCTTTATGAATGTCTTCATGTACCTGAATGACAGACAATGCTCAGGCTTCAGTGAGAGTGATGAACGAGACTGGATGTCCATAGTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp GGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGTGAGGATTAAAGAAGACATCTTGATGTCATaGGCCCCACACTCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: GRTALKDANLFLMVRIKEDILMS*APHSSL
Trigger: CAGGCTGGAGTGTGGGGCCAATGACATCAAGATGTC...TTCTTTAATCCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp AAGTTCATATACATTGTGTGTCTCATCTTAGATCACATAGCAGAACATGCATTGGTGCAGGTGGCGTTGTaGTGGCATTCAGAACACCGT +
Preference number: 5 (lower is better)
Translates to: KFIYIVCLILDHIAEHALVQVAL*WHSEHR
Trigger: ACGGTGTTCTGAATGCCACAACAACGCCACCTGCAC...CAATGCATGTTCTGCTATGTGATCTAAGATGAGACACACAATGTATATGAACTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp AAGTTCATATACATTGTGTGTCTCATCTTAGATCACATAGCAGAACATGCATTGCATCACAGAAGGACCTaGGTGGGGCTGTGTGTAGGT +
Preference number: 5 (lower is better)
Translates to: KFIYIVCLILDHIAEHALHHRRT*VGLCVG
Trigger: ACCTACACACAGCCCCACCAAGGTCCTTCTGTGATG...CAATGCATGTTCTGCTATGTGATCTAAGATGAGACACACAATGTATATGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS-3UTR CAA 90 bp GGAAGAACAGCACTGAAAGATGCCAACTTGTTTTTGATGGTGAGGATTAAAGAACAGCCTGTACTCCAATaGGGAGACATCTGTGATGTT +
Preference number: 5 (lower is better)
Translates to: GRTALKDANLFLMVRIKEQPVLQ*GDICDV
Trigger: AACATCACAGATGTCTCCCAATTGGAGTACAGGCTG...TTCTTTAATCCTCACCATCAAAAACAAGTTGGCATCTTTCAGTGCTGTTCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 72 bp ACGGGCACACAGGTCTCAGCCATGCGAACGCCACCCTaGCCTGTGAACCGGTACCAGCCGTGCAGACCCGCG +
Preference number: 6 (lower is better)
Translates to: TGTQVSAMRTPP*PVNRYQPCRPA
Trigger: CGCGGGTCTGCACGGCTGGTACCGGTTCACAGGCCAGGGTGGCGTTCGCATGGCTGAGACCTGTGTGCCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS TCA 72 bp CACAGGTCTCAGCCATGCGAACGCCACCCTGGCCTGTaGACCGGTACCAGCCGTGCAGACCCGCGTCACAGG +
Preference number: 6 (lower is better)
Translates to: HRSQPCERHPGL*TGTSRADPRHR
Trigger: CCTGTGACGCGGGTCTGCACGGCTGGTACCGGTTCACAGGCCAGGGTGGCGTTCGCATGGCTGAGACCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 72 bp CTTTCCATCCGGGCCCTGGGGCAAGCAGTCCAGTCCTaGCTCACAGGAGCCTGGGGAGCACTCACAGTACCA +
Preference number: 6 (lower is better)
Translates to: LSIRALGQAVQS*LTGAWGALTVP
Trigger: TGGTACTGTGAGTGCTCCCCAGGCTCCTGTGAGCCAGGACTGGACTGCTTGCCCCAGGGCCCGGATGGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033263.6
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS CCA 72 bp GCCTTCACCTGGATCTCTGTGGACCACCGGCAGCATTaGTCGCTCCAGTGTGCACAGGCCGTGCGGCTCACA +
Preference number: 6 (lower is better)
Translates to: AFTWISVDHRQH*SLQCAQAVRLT
Trigger: TGTGAGCCGCACGGCCTGTGCACACTGGAGCGACCAATGCTGCCGGTGGTCCACAGAGATCCAGGTGAAGGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CAA 72 bp AGCCTTCACCTGGATCTCTGTGGACCACCGGCAGCATaGGTCGCTCCAGTGTGCACAGGCCGTGCGGCTCAC +
Preference number: 6 (lower is better)
Translates to: SLHLDLCGPPAA*VAPVCTGRAAH
Trigger: GTGAGCCGCACGGCCTGTGCACACTGGAGCGACCAATGCTGCCGGTGGTCCACAGAGATCCAGGTGAAGGCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS TCA 72 bp GCCGTGCGGCTCACAATGCCTTCACTACTCGAGGGATaGGAGCCATTGAGCCACATGGGTGCCGCCGTGTTG +
Preference number: 6 (lower is better)
Translates to: AVRLTMPSLLEG*EPLSHMGAAVL
Trigger: CAACACGGCGGCACCCATGTGGCTCAATGGCTCTCATCCCTCGAGTAGTGAAGGCATTGTGAGCCGCACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 72 bp TCCTCACACACCAGCCCATCACCAGTGAAGCCGGTCTaGCAGGAGCACGTTGTGACCACACCATCCACCGTG +
Preference number: 6 (lower is better)
Translates to: SSHTSPSPVKPV*QEHVVTTPSTV
Trigger: CACGGTGGATGGTGTGGTCACAACGTGCTCCTGCCAGACCGGCTTCACTGGTGATGGGCTGGTGTGTGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000033263.6
ENSMUST00000207261.2
ENSMUST00000207378.2
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS CCA 72 bp AGAAGCCACCTGGGCAAGCCTTCACCTGGATCTCTGTaGACCACCGGCAGCATTGGTCGCTCCAGTGTGCAC +
Preference number: 6 (lower is better)
Translates to: RSHLGKPSPGSL*TTGSIGRSSVH
Trigger: GTGCACACTGGAGCGACCAATGCTGCCGGTGGTCCACAGAGATCCAGGTGAAGGCTTGCCCAGGTGGCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 72 bp CTGGGGCAAGCAGTCCAGTCCTGGCTCACAGGAGCCTaGGGAGCACTCACAGTACCAACCATCCCCTGTAAA +
Preference number: 6 (lower is better)
Translates to: LGQAVQSWLTGA*GALTVPTIPCK
Trigger: TTTACAGGGGATGGTTGGTACTGTGAGTGCTCCCCAGGCTCCTGTGAGCCAGGACTGGACTGCTTGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033263.6
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS CAA 90 bp GTGGCTGAGGGAAACAACAGCAGCCAGATGCTCAGGAGCCTCAAGTaGCTGGAAGCAGCCTTGGACACTGAGGCCTGGACACCTTGTCGT +
Preference number: 6 (lower is better)
Translates to: VAEGNNSSQMLRSLK*LEAALDTEAWTPCR
Trigger: ACGACAAGGTGTCCAGGCCTCAGTGTCCAAGGCTGCTTCCAGCAACTTGAGGCTCCTGAGCATCTGGCTGCTGTTGTTTCCCTCAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS GCA 72 bp TTGGTGGGGCTGTGTGTAGGTAGGGCTCTGGAACAATaGCATCCGCACGGTGAACTTGCCTGTCCCACCCAA +
Preference number: 6 (lower is better)
Translates to: LVGLCVGRALEQ*HPHGELACPTQ
Trigger: TTGGGTGGGACAGGCAAGTTCACCGTGCGGATGGCATTGTTCCAGAGCCCTACCTACACACAGCCCCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CAA 72 bp GTAGGGCTCTGGAACAATGCCATCCGCACGGTGAACTaGCCTGTCCCACCCAAGCTGATGTTCAGGGCACTG +
Preference number: 6 (lower is better)
Translates to: VGLWNNAIRTVN*PVPPKLMFRAL
Trigger: CAGTGCCCTGAACATCAGCTTGGGTGGGACAGGCAAGTTCACCGTGCGGATGGCATTGTTCCAGAGCCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CAA 90 bp AACAGCAGCCAGATGCTCAGGAGCCTCAAGTTGCTGGAAGCAGCCTaGGACACTGAGGCCTGGACACCTTGTCGTGTTATGGGACCCAAG +
Preference number: 6 (lower is better)
Translates to: NSSQMLRSLKLLEAA*DTEAWTPCRVMGPK
Trigger: CTTGGGTCCCATAACACGACAAGGTGTCCAGGCCTCAGTGTCCAAGGCTGCTTCCAGCAACTTGAGGCTCCTGAGCATCTGGCTGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS TCA 72 bp CCCGGGGTGTTCACACAGCTGCTGTTGGAGCAGTTGTaGGTCCATGGGGTAGCACACTCATCCATGTCCTCA +
Preference number: 6 (lower is better)
Translates to: PGVFTQLLLEQL*VHGVAHSSMSS
Trigger: TGAGGACATGGATGAGTGTGCTACCCCATGGACTCACAACTGCTCCAACAGCAGCTGTGTGAACACCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000033263.6
ENSMUST00000207261.2
ENSMUST00000207378.2
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS TCA 72 bp TCACAATGCCTTCACTACTCGAGGGATGAGAGCCATTaGGCCACATGGGTGCCGCCGTGTTGCATCGCAGGA +
Preference number: 6 (lower is better)
Translates to: SQCLHYSRDESH*ATWVPPCCIAG
Trigger: TCCTGCGATGCAACACGGCGGCACCCATGTGGCTCAATGGCTCTCATCCCTCGAGTAGTGAAGGCATTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS GCA 72 bp GAAACAACAGCAGCCAGATGCTCAGGAGCCTCAAGTTaGTGGAAGCAGCCTTGGACACTGAGGCCTGGACAC +
Preference number: 6 (lower is better)
Translates to: ETTAARCSGASS*WKQPWTLRPGH
Trigger: GTGTCCAGGCCTCAGTGTCCAAGGCTGCTTCCAGCAACTTGAGGCTCCTGAGCATCTGGCTGCTGTTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 72 bp ACAACAGCAGCCAGATGCTCAGGAGCCTCAAGTTGCTaGAAGCAGCCTTGGACACTGAGGCCTGGACACCTT +
Preference number: 6 (lower is better)
Translates to: TTAARCSGASSC*KQPWTLRPGHL
Trigger: AAGGTGTCCAGGCCTCAGTGTCCAAGGCTGCTTCCAGCAACTTGAGGCTCCTGAGCATCTGGCTGCTGTTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CAA 72 bp GGAAACAACAGCAGCCAGATGCTCAGGAGCCTCAAGTaGCTGGAAGCAGCCTTGGACACTGAGGCCTGGACA +
Preference number: 6 (lower is better)
Translates to: GNNSSQMLRSLK*LEAALDTEAWT
Trigger: TGTCCAGGCCTCAGTGTCCAAGGCTGCTTCCAGCAACTTGAGGCTCCTGAGCATCTGGCTGCTGTTGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CAA 90 bp CAGGAGCACGTTGTGACCACACCATCCACCGTGCAGGTGGCGTTGTaGTGGCATTCAGAACACCGTCTCGCTTCTGTTGAGTTACTGGCT +
Preference number: 6 (lower is better)
Translates to: QEHVVTTPSTVQVAL*WHSEHRLASVELLA
Trigger: AGCCAGTAACTCAACAGAAGCGAGACGGTGTTCTGAATGCCACAACAACGCCACCTGCACGGTGGATGGTGTGGTCACAACGTGCTCCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033263.6
ENSMUST00000207261.2
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS CAA 90 bp TGGCAGGAGCACGTTGTGACCACACCATCCACCGTGCAGGTGGCGTaGTTGTGGCATTCAGAACACCGTCTCGCTTCTGTTGAGTTACTG +
Preference number: 6 (lower is better)
Translates to: WQEHVVTTPSTVQVA*LWHSEHRLASVELL
Trigger: CAGTAACTCAACAGAAGCGAGACGGTGTTCTGAATGCCACAACAACGCCACCTGCACGGTGGATGGTGTGGTCACAACGTGCTCCTGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033263.6
ENSMUST00000207261.2
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS CAA 90 bp GCCCACATACAGAAAAGCCTCAGTGGACAGCATCACAGAAGGACCTaGGTGGGGCTGTGTGTAGGTAGGGCTCTGGAACAATGCCATCCG +
Preference number: 6 (lower is better)
Translates to: AHIQKSLSGQHHRRT*VGLCVGRALEQCHP
Trigger: CGGATGGCATTGTTCCAGAGCCCTACCTACACACAGCCCCACCAAGGTCCTTCTGTGATGCTGTCCACTGAGGCTTTTCTGTATGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS TCA 72 bp TACTCAGTCAGGGTCTCATATGTATTGCAGGGGTCTTaGCACACCAGCTTTCCATCCGGGCCCTGGGGCAAG +
Preference number: 6 (lower is better)
Translates to: YSVRVSYVLQGS*HTSFPSGPWGK
Trigger: CTTGCCCCAGGGCCCGGATGGAAAGCTGGTGTGTCAAGACCCCTGCAATACATATGAGACCCTGACTGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033263.6
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS GCA 72 bp CCGCGTCACAGGAGTAGCCCACACCATACTCTGTGCTaGGCCAGTACTCAGTCAGGGTCTCATATGTATTGC +
Preference number: 6 (lower is better)
Translates to: PRHRSSPHHTLC*ASTQSGSHMYC
Trigger: GCAATACATATGAGACCCTGACTGAGTACTGGCGCAGCACAGAGTATGGTGTGGGCTACTCCTGTGACGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS GCA 72 bp GACCCGCGTCACAGGAGTAGCCCACACCATACTCTGTaGTGCGCCAGTACTCAGTCAGGGTCTCATATGTAT +
Preference number: 6 (lower is better)
Translates to: DPRHRSSPHHTL*CASTQSGSHMY
Trigger: ATACATATGAGACCCTGACTGAGTACTGGCGCAGCACAGAGTATGGTGTGGGCTACTCCTGTGACGCGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 72 bp AGGGGGCGCTGTCAAGTTGTAAATATAGAAGCCACCTaGGCAAGCCTTCACCTGGATCTCTGTGGACCACCG +
Preference number: 6 (lower is better)
Translates to: RGRCQVVNIEAT*ASLHLDLCGPP
Trigger: CGGTGGTCCACAGAGATCCAGGTGAAGGCTTGCCCAGGTGGCTTCTATATTTACAACTTGACAGCGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 72 bp CATCCAGCATGGTGCCCACATACAGAAAAGCCTCAGTaGACAGCATCACAGAAGGACCTTGGTGGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: HPAWCPHTEKPQ*TASQKDLGGAV
Trigger: CACAGCCCCACCAAGGTCCTTCTGTGATGCTGTCCACTGAGGCTTTTCTGTATGTGGGCACCATGCTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 72 bp GCAGTACAAACCGGGACAAGTCACCCCCATCCAGCATaGTGCCCACATACAGAAAAGCCTCAGTGGACAGCA +
Preference number: 6 (lower is better)
Translates to: AVQTGTSHPHPA*CPHTEKPQWTA
Trigger: TGCTGTCCACTGAGGCTTTTCTGTATGTGGGCACCATGCTGGATGGGGGTGACTTGTCCCGGTTTGTACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 72 bp CTCAAGTTGCTGGAAGCAGCCTTGGACACTGAGGCCTaGACACCTTGTCGTGTTATGGGACCCAAGTTCAGG +
Preference number: 6 (lower is better)
Translates to: LKLLEAALDTEA*TPCRVMGPKFR
Trigger: CCTGAACTTGGGTCCCATAACACGACAAGGTGTCCAGGCCTCAGTGTCCAAGGCTGCTTCCAGCAACTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CAA 72 bp GTTGTGACCACACCATCCACCGTGCAGGTGGCGTTGTaGTGGCATTCAGAACACCGTCTCGCTTCTGTTGAG +
Preference number: 6 (lower is better)
Translates to: VVTTPSTVQVAL*WHSEHRLASVE
Trigger: CTCAACAGAAGCGAGACGGTGTTCTGAATGCCACAACAACGCCACCTGCACGGTGGATGGTGTGGTCACAAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000033263.6
ENSMUST00000207261.2
ENSMUST00000207378.2
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS CAA 72 bp CACGTTGTGACCACACCATCCACCGTGCAGGTGGCGTaGTTGTGGCATTCAGAACACCGTCTCGCTTCTGTT +
Preference number: 6 (lower is better)
Translates to: HVVTTPSTVQVA*LWHSEHRLASV
Trigger: AACAGAAGCGAGACGGTGTTCTGAATGCCACAACAACGCCACCTGCACGGTGGATGGTGTGGTCACAACGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000033263.6
ENSMUST00000207261.2
ENSMUST00000207378.2
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS GCA 72 bp GTACAAACCGGGACAAGTCACCCCCATCCAGCATGGTaGCCACATACAGAAAAGCCTCAGTGGACAGCATCA +
Preference number: 6 (lower is better)
Translates to: VQTGTSHPHPAW*PHTEKPQWTAS
Trigger: TGATGCTGTCCACTGAGGCTTTTCTGTATGTGGGCACCATGCTGGATGGGGGTGACTTGTCCCGGTTTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS GCA 72 bp AGATCAAAGTGGCTGAGGGAAACAACAGCAGCCAGATaGTCAGGAGCCTCAAGTTGCTGGAAGCAGCCTTGG +
Preference number: 6 (lower is better)
Translates to: RSKWLRETTAAR*SGASSCWKQPW
Trigger: CCAAGGCTGCTTCCAGCAACTTGAGGCTCCTGAGCATCTGGCTGCTGTTGTTTCCCTCAGCCACTTTGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 72 bp GTGACCACACCATCCACCGTGCAGGTGGCGTTGTTGTaGCATTCAGAACACCGTCTCGCTTCTGTTGAGTTA +
Preference number: 6 (lower is better)
Translates to: VTTPSTVQVALL*HSEHRLASVEL
Trigger: TAACTCAACAGAAGCGAGACGGTGTTCTGAATGCCACAACAACGCCACCTGCACGGTGGATGGTGTGGTCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033263.6
ENSMUST00000207261.2
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS CCA 72 bp GTTCACACAGCTGCTGTTGGAGCAGTTGTGAGTCCATaGGGTAGCACACTCATCCATGTCCTCACACACCAG +
Preference number: 6 (lower is better)
Translates to: VHTAAVGAVVSP*GSTLIHVLTHQ
Trigger: CTGGTGTGTGAGGACATGGATGAGTGTGCTACCCCATGGACTCACAACTGCTCCAACAGCAGCTGTGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000033263.6
ENSMUST00000207261.2
ENSMUST00000207378.2
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS CAA 72 bp CAGAAAAGCCTCAGTGGACAGCATCACAGAAGGACCTaGGTGGGGCTGTGTGTAGGTAGGGCTCTGGAACAA +
Preference number: 6 (lower is better)
Translates to: QKSLSGQHHRRT*VGLCVGRALEQ
Trigger: TTGTTCCAGAGCCCTACCTACACACAGCCCCACCAAGGTCCTTCTGTGATGCTGTCCACTGAGGCTTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS TCA 72 bp GTTGTTGTGGCATTCAGAACACCGTCTCGCTTCTGTTaGGTTACTGGCTTCAGCCAGAGTGAACCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: VVVAFRTPSRFC*VTGFSQSEPGG
Trigger: ACCTCCTGGTTCACTCTGGCTGAAGCCAGTAACTCAACAGAAGCGAGACGGTGTTCTGAATGCCACAACAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033263.6
ENSMUST00000207261.2
ENSMUST00000207460.2
ENSMUST00000209095.2
CDS GCA 72 bp CACCTCGCAGTGAAGGTAGACAAGGTCGTAGTTTCCTaGAAACCGGAACATCTGAACAGAAAATCGGGCCTG +
Preference number: 6 (lower is better)
Translates to: HLAVKVDKVVVS*KPEHLNRKSGL
Trigger: CAGGCCCGATTTTCTGTTCAGATGTTCCGGTTTGCAGGAAACTACGACCTTGTCTACCTTCACTGCGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 72 bp GGGCCTGAGATGACTCGCCATTCTCTGTCACCTGAATaGTTGTATCTTCTGTACGTGGACAACTGTCCTGGA +
Preference number: 6 (lower is better)
Translates to: GPEMTRHSLSPE*LYLLYVDNCPG
Trigger: TCCAGGACAGTTGTCCACGTACAGAAGATACAACCATTCAGGTGACAGAGAATGGCGAGTCATCTCAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 72 bp AGTATTTCACAGGGTCTGTGGAGTTGCTACTGGGTGTaGCATAGCAGTTGGTCATTAGCAGTACAAACCGGG +
Preference number: 6 (lower is better)
Translates to: SISQGLWSCYWV*HSSWSLAVQTG
Trigger: CCCGGTTTGTACTGCTAATGACCAACTGCTATGCCACACCCAGTAGCAACTCCACAGACCCTGTGAAATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS GCA 72 bp CATTCTTATGATGATGTCCCGAATGATGATCGCATTTaGCAGGTAGAGGGTGTTGCTGTAGGTGGCATGGGT +
Preference number: 6 (lower is better)
Translates to: HSYDDVPNDDRI*QVEGVAVGGMG
Trigger: ACCCATGCCACCTACAGCAACACCCTCTACCTGGCAAATGCGATCATCATTCGGGACATCATCATAAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS TCA 72 bp AAACCGGAACATCTGAACAGAAAATCGGGCCTGAGATaGCTCGCCATTCTCTGTCACCTGAATGGTTGTATC +
Preference number: 6 (lower is better)
Translates to: KPEHLNRKSGLR*LAILCHLNGCI
Trigger: GATACAACCATTCAGGTGACAGAGAATGGCGAGTCATCTCAGGCCCGATTTTCTGTTCAGATGTTCCGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS TCA 72 bp TGTCGTGTTATGGGACCCAAGTTCAGGACACGGGTCTaGTCTATGAAGTTCCCACTTCGAAATCTAGTACCA +
Preference number: 6 (lower is better)
Translates to: CRVMGPKFRTRV*SMKFPLRNLVP
Trigger: TGGTACTAGATTTCGAAGTGGGAACTTCATAGATCAGACCCGTGTCCTGAACTTGGGTCCCATAACACGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS TCA 72 bp GGACATCCAGTCTCGTTCATCACTCTCACTGAAGCCTaGGCATTGTCTGTCATTCAGGTACATGAAGACATT +
Preference number: 6 (lower is better)
Translates to: GHPVSFITLTEA*ALSVIQVHEDI
Trigger: AATGTCTTCATGTACCTGAATGACAGACAATGCTCAGGCTTCAGTGAGAGTGATGAACGAGACTGGATGTCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2
CDS CCA 72 bp ATTCTCTGTCACCTGAATGGTTGTATCTTCTGTACGTaGACAACTGTCCTGGATAATGAAGTATTTCACAGG +
Preference number: 6 (lower is better)
Translates to: ILCHLNGCIFCT*TTVLDNEVFHR
Trigger: CCTGTGAAATACTTCATTATCCAGGACAGTTGTCCACGTACAGAAGATACAACCATTCAGGTGACAGAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033263.6
ENSMUST00000209095.2