Pregenerated sensors for UMAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089862Ensembl transcript IDs: ENSMUST00000159168.3, ENSMUST00000159335.8, ENSMUST00000159378.8, ENSMUST00000159433.8, ENSMUST00000160705.8, ENSMUST00000162034.8
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACCAGAATCGGGACAAGTTGTCGCCGACATCGTATGAGAGTACGTaGTCAGGAAGGTCGCTGATGGTGCCCTGTGCCGCCAGCACATGT | + |
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Preference number: 1 (lower is better) Translates to: YQNRDKLSPTSYEST*SGRSLMVPCAASTC Trigger: ACATGTGCTGGCGGCACAGGGCACCATCAGCGACCTTCCTGACCACGTACTCTCATACGATGTCGGCGACAACTTGTCCCGATTCTGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
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| 3UTR TCA 90 bp | TCCTCTGAACCCAGGCCCTTCACACCCGCTCCATGCTCAGGTTGCTaGGCCTTGGTAACTGAGCGAGGGAAGTTCTTGTTTCTCTTTCAC | + |
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Preference number: 1 (lower is better) Translates to: SSEPRPFTPAPCSGC*ALVTERGKFLFLFH Trigger: GTGAAAGAGAAACAAGAACTTCCCTCGCTCAGTTACCAAGGCTCAGCAACCTGAGCATGGAGCGGGTGTGAAGGGCCTGGGTTCAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR TCA 90 bp | AGTGAAATCATACCAGAATCGGGACAAGTTGTCGCCGACATCGTATaGGAGTACGTGGTCAGGAAGGTCGCTGATGGTGCCCTGTGCCGC | + |
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Preference number: 1 (lower is better) Translates to: SEIIPESGQVVADIV*EYVVRKVADGALCR Trigger: GCGGCACAGGGCACCATCAGCGACCTTCCTGACCACGTACTCTCATACGATGTCGGCGACAACTTGTCCCGATTCTGGTATGATTTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
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| 3UTR TCA 90 bp | GCCCTTCACACCCGCTCCATGCTCAGGTTGCTGAGCCTTGGTAACTaGGCGAGGGAAGTTCTTGTTTCTCTTTCACTGTTGTGTCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: ALHTRSMLRLLSLGN*AREVLVSLSLLCQQ Trigger: TTGCTGACACAACAGTGAAAGAGAAACAAGAACTTCCCTCGCTCAGTTACCAAGGCTCAGCAACCTGAGCATGGAGCGGGTGTGAAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR GCA 90 bp | GCTTTGGTTGGGGCAGGAGTTAGTAAAGTCGAGGCCTTTTCATGCTaGCTCTGTTCTGTTGGAATGTGTTTCTTTGAGAGGCCTCCAATC | + |
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Preference number: 1 (lower is better) Translates to: ALVGAGVSKVEAFSC*LCSVGMCFFERPPI Trigger: GATTGGAGGCCTCTCAAAGAAACACATTCCAACAGAACAGAGGCAGCATGAAAAGGCCTCGACTTTACTAACTCCTGCCCCAACCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR GCA 90 bp | TCAGTGAATCAGGGTGTGGTCTCTGGACTCGAATATCAGCATCAGTaGAGCATCACCTGGATGTTTGTGTATTCCTTATGTACTGACTTG | + |
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Preference number: 1 (lower is better) Translates to: SVNQGVVSGLEYQHQ*SITWMFVYSLCTDL Trigger: CAAGTCAGTACATAAGGAATACACAAACATCCAGGTGATGCTGCACTGATGCTGATATTCGAGTCCAGAGACCACACCCTGATTCACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR CCA 90 bp | GGTGTGGTCTCTGGACTCGAATATCAGCATCAGTGCAGCATCACCTaGATGTTTGTGTATTCCTTATGTACTGACTTGAATTTGTTCCAT | + |
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Preference number: 1 (lower is better) Translates to: GVVSGLEYQHQCSIT*MFVYSLCTDLNLFH Trigger: ATGGAACAAATTCAAGTCAGTACATAAGGAATACACAAACATCCAGGTGATGCTGCACTGATGCTGATATTCGAGTCCAGAGACCACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR TCA 90 bp | GCATCAGTGCAGCATCACCTGGATGTTTGTGTATTCCTTATGTACTaGCTTGAATTTGTTCCATATGTACATGTGAGAGGCATGAATCCT | + |
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Preference number: 1 (lower is better) Translates to: ASVQHHLDVCVFLMY*LEFVPYVHVRGMNP Trigger: AGGATTCATGCCTCTCACATGTACATATGGAACAAATTCAAGTCAGTACATAAGGAATACACAAACATCCAGGTGATGCTGCACTGATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR TCA 90 bp | ATAGACACAAAGACTACAAATCACAGAGGACTGAATTTTCAAGAGTaGAATCATACCAGAATCGGGACAAGTTGTCGCCGACATCGTATG | + |
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Preference number: 1 (lower is better) Translates to: IDTKTTNHRGLNFQE*NHTRIGTSCRRHRM Trigger: CATACGATGTCGGCGACAACTTGTCCCGATTCTGGTATGATTTCACTCTTGAAAATTCAGTCCTCTGTGATTTGTAGTCTTTGTGTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
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| 3UTR CCA 90 bp | GAAACAGCCCCCAGTCTTGGGCTACTGGTATACTTCATAGGTGTGTaGAAATATGTCATCTATACATTTTGGACTAACATCAAAGCAAAC | + |
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Preference number: 1 (lower is better) Translates to: ETAPSLGLLVYFIGV*KYVIYTFWTNIKAN Trigger: GTTTGCTTTGATGTTAGTCCAAAATGTATAGATGACATATTTCCACACACCTATGAAGTATACCAGTAGCCCAAGACTGGGGGCTGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR CCA 90 bp | GCGGTGGGAGGAAGAAGACAGGAGCATGCTTTAAAGATTCACTGGTaGATGATATTACTATATTTGACTTATCTTCTCACTTGGAATCTT | + |
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Preference number: 1 (lower is better) Translates to: AVGGRRQEHALKIHW*MILLYLTYLLTWNL Trigger: AAGATTCCAAGTGAGAAGATAAGTCAAATATAGTAATATCATCCACCAGTGAATCTTTAAAGCATGCTCCTGTCTTCTTCCTCCCACCGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR CCA 90 bp | TTTTTGTCAATAGTGAGTAATGTTTTTGGCTTTAGACCACATGGTTaGTCTGGCATTGGTAACAGCAGCCAAACAAAGAGGCATTGCTAT | + |
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Preference number: 1 (lower is better) Translates to: FLSIVSNVFGFRPHG*SGIGNSSQTKRHCY Trigger: ATAGCAATGCCTCTTTGTTTGGCTGCTGTTACCAATGCCAGACCAACCATGTGGTCTAAAGCCAAAAACATTACTCACTATTGACAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCATTCTAGTCCTATCTGGGTGTCTGCCTACACACTAATTGGAGCATCATTCGCTGATGGTGCCCTGTaGCGCCAGCACATGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: GHSSPIWVSAYTLIGASFADGAL*RQHMWG Trigger: GCCCCACATGTGCTGGCGGCACAGGGCACCATCAGC...GAATGATGCTCCAATTAGTGTGTAGGCAGACACCCAGATAGGACTAGAATGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCATTCTAGTCCTATCTGGGTGTCTGCCTACACACTAATTGGAGCATCATTCCATGTGGGGCCAGGGTaGAGGGCACATCGCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GHSSPIWVSAYTLIGASFHVGPG*RAHRSG Trigger: TCCTGAGCGATGTGCCCTTCACCCTGGCCCCACATG...GAATGATGCTCCAATTAGTGTGTAGGCAGACACCCAGATAGGACTAGAATGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTTACTTGGAATAAACAGTGGGCATTCTAGTCCTATCTGGGTGTCTGCCTACAGGAAGCAGAAGAGGTaGAAGCAGAAGCAGACCCAC | + |
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Preference number: 2 (lower is better) Translates to: ALLGINSGHSSPIWVSAYRKQKR*KQKQTH Trigger: GTGGGTCTGCTTCTGCTTTCACCTCTTCTGCTTCCT...GTAGGCAGACACCCAGATAGGACTAGAATGCCCACTGTTTATTCCAAGTAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTGCCTCTGTTCTGTTGGAATGTGTTTCTTTGAGAGGCCTCCAATCCTCAGGGAGAGAAAGGGCTTGTaGTATGAAATGGTGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: CCLCSVGMCFFERPPILRERKGL*YEMVPA Trigger: TGCAGGCACCATTTCATACCACAAGCCCTTTCTCTC...CCTGAGGATTGGAGGCCTCTCAAAGAAACACATTCCAACAGAACAGAGGCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR CAA 90 bp | AGGACTGAATTTTCAAGAGTGAAATCATACCAGAATCGGGACAAGTaGTCGCCGACATCGTATGAGAGTACGTGGTCAGGAAGGTCGCTG | + |
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Preference number: 2 (lower is better) Translates to: RTEFSRVKSYQNRDK*SPTSYESTWSGRSL Trigger: CAGCGACCTTCCTGACCACGTACTCTCATACGATGTCGGCGACAACTTGTCCCGATTCTGGTATGATTTCACTCTTGAAAATTCAGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGTTAGTAAAGTCGAGGCCTTTTCATGCTGCCTCTGTTCTGTTGGAATGTGTTGCTGTATAGGTCAGTaGATCAGGGTGTGGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: GVSKVEAFSCCLCSVGMCCCIGQ*IRVWSL Trigger: CAGAGACCACACCCTGATTCACTGACCTATACAGCA...ACACATTCCAACAGAACAGAGGCAGCATGAAAAGGCCTCGACTTTACTAACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTTACTTGGAATAAACAGTGGGCATTCTAGTCCTATCTGGGTGTCTGCCTACTTTATGATCCTTGCTTaGCTCAAGGCCGCCACCAGT | + |
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Preference number: 2 (lower is better) Translates to: ALLGINSGHSSPIWVSAYFMILA*LKAATS Trigger: ACTGGTGGCGGCCTTGAGGCAAGCAAGGATCATAAA...GTAGGCAGACACCCAGATAGGACTAGAATGCCCACTGTTTATTCCAAGTAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTTACTTGGAATAAACAGTGGGCATTCTAGTCCTATCTGGGTGTCTGCCTACTTAACAGTCAAACCCTaGCACTGTACTGCGGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: ALLGINSGHSSPIWVSAYLTVKP*HCTAAN Trigger: GTTGGCCGCAGTACAGTGGCAGGGTTTGACTGTTAA...GTAGGCAGACACCCAGATAGGACTAGAATGCCCACTGTTTATTCCAAGTAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCAGGAGTTAGTAAAGTCGAGGCCTTTTCATGCTGCCTCTGTTCTGTTGGACAGTGCAGCATCACCTaGATGTTTGTGTATTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: GAGVSKVEAFSCCLCSVGQCSIT*MFVYSL Trigger: TAAGGAATACACAAACATCCAGGTGATGCTGCACTG...TCCAACAGAACAGAGGCAGCATGAAAAGGCCTCGACTTTACTAACTCCTGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGAGCGAGGGAAGTTCTTGTTTCTCTTTCACTGTTGTGTCAGCAAAAACACCCAAGGCCGCCACCAGTaGAATGACAAAGAACATCAC | + |
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Preference number: 2 (lower is better) Translates to: TERGKFLFLFHCCVSKNTQGRHQ*NDKEHH Trigger: GTGATGTTCTTTGTCATTTCACTGGTGGCGGCCTTG...GGTGTTTTTGCTGACACAACAGTGAAAGAGAAACAAGAACTTCCCTCGCTCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR TCA 90 bp | TTACTTGGAATAAACAGTGGGCATTCTAGTCCTATCTGGGTGTCTGCCTACACACAAGGCCGCCACCAGTaGAATGACAAAGAACATCAC | + |
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Preference number: 2 (lower is better) Translates to: LLGINSGHSSPIWVSAYTQGRHQ*NDKEHH Trigger: GTGATGTTCTTTGTCATTTCACTGGTGGCGGCCTTG...TGTGTAGGCAGACACCCAGATAGGACTAGAATGCCCACTGTTTATTCCAAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTCATGCTGCCTCTGTTCTGTTGGAATGTGTTTCTTTGAGAGGCCTCCAATCAAAGGGCTTGTGGTATaGAATGGTGCCTGCAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: FSCCLCSVGMCFFERPPIKGLVV*NGACKE Trigger: CTCCTTGCAGGCACCATTTCATACCACAAGCCCTTT...GATTGGAGGCCTCTCAAAGAAACACATTCCAACAGAACAGAGGCAGCATGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCATTCTAGTCCTATCTGGGTGTCTGCCTACACACTAATTGGAGCATCATTCGACCGACAGCAATCCTaGTCAGCTTTACTTGGAATA | + |
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Preference number: 2 (lower is better) Translates to: GHSSPIWVSAYTLIGASFDRQQS*SALLGI Trigger: TATTCCAAGTAAAGCTGAGCAGGATTGCTGTCGGTC...GAATGATGCTCCAATTAGTGTGTAGGCAGACACCCAGATAGGACTAGAATGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR TCA 90 bp | AAAATTTTCACGGCAAGGAAATGGCCCTGTTACTCTAGACCAACTCTCTTAGTCCAAGGCCGCCACCAGTaGAATGACAAAGAACATCAC | + |
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Preference number: 2 (lower is better) Translates to: KIFTARKWPCYSRPTLLVQGRHQ*NDKEHH Trigger: GTGATGTTCTTTGTCATTTCACTGGTGGCGGCCTTG...GACTAAGAGAGTTGGTCTAGAGTAACAGGGCCATTTCCTTGCCGTGAAAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAAACACCCTGTGCCTCTCATATACTCTCCACAATTGGACTTTTATCACATGTTTATGATCCTTGCTTaGCTCAAGGCCGCCACCAGT | + |
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Preference number: 2 (lower is better) Translates to: QKHPVPLIYSPQLDFYHMFMILA*LKAATS Trigger: ACTGGTGGCGGCCTTGAGGCAAGCAAGGATCATAAA...CATGTGATAAAAGTCCAATTGTGGAGAGTATATGAGAGGCACAGGGTGTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR GCA 90 bp | TTACTTGGAATAAACAGTGGGCATTCTAGTCCTATCTGGGTGTCTGCCTACACAAGCAAAAACACCCTGTaGCTCTCATATACTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LLGINSGHSSPIWVSAYTSKNTL*LSYTLH Trigger: GTGGAGAGTATATGAGAGGCACAGGGTGTTTTTGCT...TGTGTAGGCAGACACCCAGATAGGACTAGAATGCCCACTGTTTATTCCAAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGCGAGGGAAGTTCTTGTTTCTCTTTCACTGTTGTGTCAGCAAAAACACCAGCAAAAACACCCTGTaGCTCTCATATACTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: TERGKFLFLFHCCVSKNTSKNTL*LSYTLH Trigger: GTGGAGAGTATATGAGAGGCACAGGGTGTTTTTGCT...GGTGTTTTTGCTGACACAACAGTGAAAGAGAAACAAGAACTTCCCTCGCTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR GCA 90 bp | AGCGAGGGAAGTTCTTGTTTCTCTTTCACTGTTGTGTCAGCAAAAACACCCTGTAGCAAAAACACCCTGTaGCTCTCATATACTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SEGSSCFSFTVVSAKTPCSKNTL*LSYTLH Trigger: GTGGAGAGTATATGAGAGGCACAGGGTGTTTTTGCT...ACAGGGTGTTTTTGCTGACACAACAGTGAAAGAGAAACAAGAACTTCCCTCGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTTGGGCTACTGGTATACTTCATAGGTGTGTGGAAATATGTCATCTATACTGTGGTATGAAATGGTaGCTGCAAGGAGTGTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: QSWATGILHRCVEICHLYCGMKW*LQGVWV Trigger: CACCCACACTCCTTGCAGGCACCATTTCATACCACA...GTATAGATGACATATTTCCACACACCTATGAAGTATACCAGTAGCCCAAGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCATTCTAGTCCTATCTGGGTGTCTGCCTACACACTAATTGGAGCATCATTCTGGACTTTTATCACATaGGGAAATATGAGTGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: GHSSPIWVSAYTLIGASFWTFIT*GNMSGL Trigger: CAGACCACTCATATTTCCCCATGTGATAAAAGTCCA...GAATGATGCTCCAATTAGTGTGTAGGCAGACACCCAGATAGGACTAGAATGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR CCA 90 bp | AACTCTCTTAGTCGTGTACTGACCGACAGCAATCCTGCTCAGCTTTACTTGGAATGCCTACACACTAATTaGAGCATCATTCAACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: NSLSRVLTDSNPAQLYLECLHTN*SIIQLG Trigger: ACCCAGTTGAATGATGCTCCAATTAGTGTGTAGGCA...TTCCAAGTAAAGCTGAGCAGGATTGCTGTCGGTCAGTACACGACTAAGAGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTTGGGCTACTGGTATACTTCATAGGTGTGTGGAAATATGTCATCTATACGCACAGCATCTTAAGTaGAGTCGTTATGCTCACAGC | + |
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Preference number: 2 (lower is better) Translates to: QSWATGILHRCVEICHLYAQHLK*SRYAHS Trigger: GCTGTGAGCATAACGACTGCACTTAAGATGCTGTGC...GTATAGATGACATATTTCCACACACCTATGAAGTATACCAGTAGCCCAAGACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR-3UTR CCA 90 bp | TTACTTGGAATAAACAGTGGGCATTCTAGTCCTATCTGGGTGTCTGCCTACACACTGCTCAGCTTTACTTaGAATAAACAGTGGGCATTC | + |
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Preference number: 2 (lower is better) Translates to: LLGINSGHSSPIWVSAYTLLSFT*NKQWAF Trigger: GAATGCCCACTGTTTATTCCAAGTAAAGCTGAGCAG...TGTGTAGGCAGACACCCAGATAGGACTAGAATGCCCACTGTTTATTCCAAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGTGGTCTCTGGACTCGAATATCAGCATCAGTGCAGCATCACCTGGATGTTTAAAGGTAACAAGAGTTaGAAGAACTTGAAAAGCACA | + |
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Preference number: 2 (lower is better) Translates to: GVVSGLEYQHQCSITWMFKGNKS*KNLKST Trigger: TGTGCTTTTCAAGTTCTTCCAACTCTTGTTACCTTT...AAACATCCAGGTGATGCTGCACTGATGCTGATATTCGAGTCCAGAGACCACACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGACCACATGGTTGGTCTGGCATTGGTAACAGCAGCCAAACAAAGAGGCATTTGCCCCTATTATATTTaGCAATTAGAGTGTCGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LDHMVGLALVTAAKQRGICPYYI*QLECRH Trigger: GTGACGACACTCTAATTGCCAAATATAATAGGGGCA...AATGCCTCTTTGTTTGGCTGCTGTTACCAATGCCAGACCAACCATGTGGTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR CAA 90 bp | AAGAAGGGCTGGTGTTTCGAAGAGGTTTCAATTTTCCCTAGTGGTTaGTCTGACCTCATTCATAAACACTGTGAGAGTAACTGCATAGGA | + |
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Preference number: 2 (lower is better) Translates to: KKGWCFEEVSIFPSG*SDLIHKHCESNCIG Trigger: TCCTATGCAGTTACTCTCACAGTGTTTATGAATGAGGTCAGACAAACCACTAGGGAAAATTGAAACCTCTTCGAAACACCAGCCCTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR CCA 90 bp | AGCGAGGGAAGTTCTTGTTTCTCTTTCACTGTTGTGTCAGCAAAAACACCCTGTACAGGTTCAATAAAATaGGCAGCCTCATTTCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: SEGSSCFSFTVVSAKTPCTGSIK*AASFPL Trigger: TAAAGGAAATGAGGCTGCCCATTTTATTGAACCTGT...ACAGGGTGTTTTTGCTGACACAACAGTGAAAGAGAAACAAGAACTTCCCTCGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAGAGGGCCACATGAGTCTAAGAAAACCAAAGCATCTCCCTTAGTCTTGAATACAGGTTCAATAAAATaGGCAGCCTCATTTCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: WRGPHESKKTKASPLVLNTGSIK*AASFPL Trigger: TAAAGGAAATGAGGCTGCCCATTTTATTGAACCTGT...ATTCAAGACTAAGGGAGATGCTTTGGTTTTCTTAGACTCATGTGGCCCTCTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAGAGGGCCACATGAGTCTAAGAAAACCAAAGCATCTCCCTTAGTCTTGAATTATACTCTCCACAATTaGACTTTTATCACATGGGGA | + |
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Preference number: 2 (lower is better) Translates to: WRGPHESKKTKASPLVLNYTLHN*TFITWG Trigger: TCCCCATGTGATAAAAGTCCAATTGTGGAGAGTATA...ATTCAAGACTAAGGGAGATGCTTTGGTTTTCTTAGACTCATGTGGCCCTCTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTTGGGCTACTGGTATACTTCATAGGTGTGTGGAAATATGTCATCTATACCTAAAAATAAGCACTTaGCCAAATTTGGACAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: QSWATGILHRCVEICHLYLKIST*PNLDKG Trigger: CCCTTTGTCCAAATTTGGCCAAGTGCTTATTTTTAG...GTATAGATGACATATTTCCACACACCTATGAAGTATACCAGTAGCCCAAGACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCACAATTGGACTTTTATCACATGGGGAAATATGAGTGGTCTGAATCCATATACAGGTTCAATAAAATaGGCAGCCTCATTTCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: LHNWTFITWGNMSGLNPYTGSIK*AASFPL Trigger: TAAAGGAAATGAGGCTGCCCATTTTATTGAACCTGT...ATATGGATTCAGACCACTCATATTTCCCCATGTGATAAAAGTCCAATTGTGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR-3UTR TCA 90 bp | ACATGGATAGTTAAAAAGGATGTACCATCACAGAAGTGCTACAAAATGTTCACACTGAATTTTCAAGAGTaGAATCATACCAGAATCGGG | + |
|
Preference number: 2 (lower is better) Translates to: TWIVKKDVPSQKCYKMFTLNFQE*NHTRIG Trigger: CCCGATTCTGGTATGATTTCACTCTTGAAAATTCAG...TGTGAACATTTTGTAGCACTTCTGTGATGGTACATCCTTTTTAACTATCCATGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
||
| 3UTR GCA 72 bp | GAGTACGTGGTCAGGAAGGTCGCTGATGGTGCCCTGTaGCGCCAGCACATGTGGGGCCAGGGTGAAGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: EYVVRKVADGAL*RQHMWGQGEGH Trigger: GTGCCCTTCACCCTGGCCCCACATGTGCTGGCGGCACAGGGCACCATCAGCGACCTTCCTGACCACGTACTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
||
| 3UTR CCA 72 bp | CGGGACAAGTTGTCGCCGACATCGTATGAGAGTACGTaGTCAGGAAGGTCGCTGATGGTGCCCTGTGCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: RDKLSPTSYEST*SGRSLMVPCAA Trigger: GGCGGCACAGGGCACCATCAGCGACCTTCCTGACCACGTACTCTCATACGATGTCGGCGACAACTTGTCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
||
| 3UTR TCA 72 bp | CCCAGGCCCTTCACACCCGCTCCATGCTCAGGTTGCTaGGCCTTGGTAACTGAGCGAGGGAAGTTCTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PRPFTPAPCSGC*ALVTERGKFLF Trigger: AAACAAGAACTTCCCTCGCTCAGTTACCAAGGCTCAGCAACCTGAGCATGGAGCGGGTGTGAAGGGCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| 3UTR CCA 72 bp | AGCAGAAGAGGTGAAAGCAGAAGCAGACCCACGAGCTaGGAACACACGTGGTCAGGAAGGACCCACAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: SRRGESRSRPTS*EHTWSGRTHRT Trigger: TGTCCTGTGGGTCCTTCCTGACCACGTGTGTTCCCAGCTCGTGGGTCTGCTTCTGCTTTCACCTCTTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| 3UTR TCA 72 bp | ACCCGCTCCATGCTCAGGTTGCTGAGCCTTGGTAACTaGGCGAGGGAAGTTCTTGTTTCTCTTTCACTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: TRSMLRLLSLGN*AREVLVSLSLL Trigger: CAACAGTGAAAGAGAAACAAGAACTTCCCTCGCTCAGTTACCAAGGCTCAGCAACCTGAGCATGGAGCGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGCGAGGGAAGTTCTTGTTTCTCTTTCACTGTTGTGTCAGCAAAAACACCCTTTTATGATCCTTGCTaGCCTCAAGGCCGCCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSEGSSCFSFTVVSAKTPFYDPC*PQGRHQ Trigger: CTGGTGGCGGCCTTGAGGCAAGCAAGGATCATAAAA...GGGTGTTTTTGCTGACACAACAGTGAAAGAGAAACAAGAACTTCCCTCGCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACGTGGTCAGGAAGGACCCACAGGACAGTTCTCTAGAAAGGGCTTCAACACAGTTTCTCTTTCACTGTaGTGTCAGCAAAAACACCCT | + |
|
Preference number: 3 (lower is better) Translates to: TRGQEGPTGQFSRKGFNTVSLSL*CQQKHP Trigger: AGGGTGTTTTTGCTGACACAACAGTGAAAGAGAAAC...TGTGTTGAAGCCCTTTCTAGAGAACTGTCCTGTGGGTCCTTCCTGACCACGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAATTTTCACGGCAAGGAAATGGCCCTGTTACTCTAGACCAACTCTCTTAGTCTTTTATGATCCTTGCTaGCCTCAAGGCCGCCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: KIFTARKWPCYSRPTLLVFYDPC*PQGRHQ Trigger: CTGGTGGCGGCCTTGAGGCAAGCAAGGATCATAAAA...GACTAAGAGAGTTGGTCTAGAGTAACAGGGCCATTTCCTTGCCGTGAAAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTACTTGGAATAAACAGTGGGCATTCTAGTCCTATCTGGGTGTCTGCCTACGCATCTCCCTTAGTCTaGAATCAGCAAAGAAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ALLGINSGHSSPIWVSAYASPLV*NQQRRA Trigger: AGCCCTTCTTTGCTGATTCAAGACTAAGGGAGATGC...GTAGGCAGACACCCAGATAGGACTAGAATGCCCACTGTTTATTCCAAGTAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| 3UTR GCA 72 bp | CAGGGTGTGGTCTCTGGACTCGAATATCAGCATCAGTaGAGCATCACCTGGATGTTTGTGTATTCCTTATGT | + |
|
Preference number: 3 (lower is better) Translates to: QGVVSGLEYQHQ*SITWMFVYSLC Trigger: ACATAAGGAATACACAAACATCCAGGTGATGCTGCACTGATGCTGATATTCGAGTCCAGAGACCACACCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| 3UTR GCA 72 bp | GTTGGGGCAGGAGTTAGTAAAGTCGAGGCCTTTTCATaGTGCCTCTGTTCTGTTGGAATGTGTTTCTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: VGAGVSKVEAFS*CLCSVGMCFFE Trigger: CTCAAAGAAACACATTCCAACAGAACAGAGGCAGCATGAAAAGGCCTCGACTTTACTAACTCCTGCCCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGGCAGGAGTTAGTAAAGTCGAGGCCTTTTCATGCTGCCTCTGTTCTGTTGGATCTAAAAATAAGCACTaGGCCAAATTTGGACAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GAGVSKVEAFSCCLCSVGSKNKH*AKFGQR Trigger: CCTTTGTCCAAATTTGGCCAAGTGCTTATTTTTAGA...TCCAACAGAACAGAGGCAGCATGAAAAGGCCTCGACTTTACTAACTCCTGCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| 3UTR TCA 72 bp | TTCATGCTGCCTCTGTTCTGTTGGAATGTGTTTCTTTaGGAGGCCTCCAATCCTCAGGACAGATTTCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: FMLPLFCWNVFL*EASNPQDRFLT Trigger: AGTGAGAAATCTGTCCTGAGGATTGGAGGCCTCTCAAAGAAACACATTCCAACAGAACAGAGGCAGCATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAATTTTCACGGCAAGGAAATGGCCCTGTTACTCTAGACCAACTCTCTTAGTCGCATCTCCCTTAGTCTaGAATCAGCAAAGAAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KIFTARKWPCYSRPTLLVASPLV*NQQRRA Trigger: AGCCCTTCTTTGCTGATTCAAGACTAAGGGAGATGC...GACTAAGAGAGTTGGTCTAGAGTAACAGGGCCATTTCCTTGCCGTGAAAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTTAGTAAAGTCGAGGCCTTTTCATGCTGCCTCTGTTCTGTTGGAATGTGTGTGCCCCTATTATATTaGGCAATTAGAGTGTCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GVSKVEAFSCCLCSVGMCVPLLY*AIRVSS Trigger: TGACGACACTCTAATTGCCAAATATAATAGGGGCAC...ACACATTCCAACAGAACAGAGGCAGCATGAAAAGGCCTCGACTTTACTAACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTTAGTAAAGTCGAGGCCTTTTCATGCTGCCTCTGTTCTGTTGGAATGTGTATTCCATTTCTGCGATaGCGTGTATGCTTAGGATTG | + |
|
Preference number: 3 (lower is better) Translates to: GVSKVEAFSCCLCSVGMCIPFLR*RVCLGL Trigger: CAATCCTAAGCATACACGCAATCGCAGAAATGGAAT...ACACATTCCAACAGAACAGAGGCAGCATGAAAAGGCCTCGACTTTACTAACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| 3UTR GCA 72 bp | ATGGGCAGCCTCATTTCCTTTAAAGCTGCTAGGGTATaGATAGACACAAAGACTACAAATCACAGAGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: MGSLISFKAARV*IDTKTTNHRGL Trigger: CAGTCCTCTGTGATTTGTAGTCTTTGTGTCTATGCATACCCTAGCAGCTTTAAAGGAAATGAGGCTGCCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACAATTGGACTTTTATCACATGGGGAAATATGAGTGGTCTGAATCCATATTTTTTTATGATCCTTGCTaGCCTCAAGGCCGCCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: PQLDFYHMGKYEWSESIFFYDPC*PQGRHQ Trigger: CTGGTGGCGGCCTTGAGGCAAGCAAGGATCATAAAA...AAATATGGATTCAGACCACTCATATTTCCCCATGTGATAAAAGTCCAATTGTGG 43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAGCGAGGGAAGTTCTTGTTTCTCTTTCACTGTTGTGTCAGCAAAAACACCGTTTCTCTTTCACTGTaGTGTCAGCAAAAACACCCT | + |
|
Preference number: 3 (lower is better) Translates to: TERGKFLFLFHCCVSKNTVSLSL*CQQKHP Trigger: AGGGTGTTTTTGCTGACACAACAGTGAAAGAGAAAC...GGTGTTTTTGCTGACACAACAGTGAAAGAGAAACAAGAACTTCCCTCGCTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| 3UTR CCA 72 bp | TTTCTATTTCAGTTCTATGGCAAGTATTTCTGGAGGTaGCTCACCCAGCAAGGGGATCTTCAAGATGTACAT | + |
|
Preference number: 3 (lower is better) Translates to: FLFQFYGKYFWR*LTQQGDLQDVH Trigger: ATGTACATCTTGAAGATCCCCTTGCTGGGTGAGCCACCTCCAGAAATACTTGCCATAGAACTGAAATAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| 3UTR TCA 72 bp | AAAAGTTACTTCATGATTTTGTGCTGTATAGGTCAGTaGATCAGGGTGTGGTCTCTGGACTCGAATATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KSYFMILCCIGQ*IRVWSLDSNIS Trigger: GCTGATATTCGAGTCCAGAGACCACACCCTGATTCACTGACCTATACAGCACAAAATCATGAAGTAACTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| 3UTR TCA 72 bp | AAGACTACAAATCACAGAGGACTGAATTTTCAAGAGTaGAATCATACCAGAATCGGGACAAGTTGTCGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: KTTNHRGLNFQE*NHTRIGTSCRR Trigger: TCGGCGACAACTTGTCCCGATTCTGGTATGATTTCACTCTTGAAAATTCAGTCCTCTGTGATTTGTAGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
||
| 3UTR CCA 72 bp | TCTGGACTCGAATATCAGCATCAGTGCAGCATCACCTaGATGTTTGTGTATTCCTTATGTACTGACTTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SGLEYQHQCSIT*MFVYSLCTDLN Trigger: ATTCAAGTCAGTACATAAGGAATACACAAACATCCAGGTGATGCTGCACTGATGCTGATATTCGAGTCCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| 3UTR TCA 72 bp | CAGCATCACCTGGATGTTTGTGTATTCCTTATGTACTaGCTTGAATTTGTTCCATATGTACATGTGAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QHHLDVCVFLMY*LEFVPYVHVRG Trigger: GCCTCTCACATGTACATATGGAACAAATTCAAGTCAGTACATAAGGAATACACAAACATCCAGGTGATGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| 3UTR TCA 72 bp | TCACCTGGATGTTTGTGTATTCCTTATGTACTGACTTaGATTTGTTCCATATGTACATGTGAGAGGCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: SPGCLCIPYVLT*ICSICTCERHE Trigger: TTCATGCCTCTCACATGTACATATGGAACAAATTCAAGTCAGTACATAAGGAATACACAAACATCCAGGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| CDS-3UTR GCA 90 bp | ACACGTGGTCAGGAAGGACCCACAGGACAGTTCTCTAGAAAGGGCTTCAACACAGCTGATGGTGCCCTGTaGCGCCAGCACATGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TRGQEGPTGQFSRKGFNTADGAL*RQHMWG Trigger: GCCCCACATGTGCTGGCGGCACAGGGCACCATCAGC...TGTGTTGAAGCCCTTTCTAGAGAACTGTCCTGTGGGTCCTTCCTGACCACGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCTCTGTTCTGTTGGAATGTGTTTCTTTGAGAGGCCTCCAATCCTCAGGGCTGATGGTGCCCTGTaGCGCCAGCACATGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CCLCSVGMCFFERPPILRADGAL*RQHMWG Trigger: GCCCCACATGTGCTGGCGGCACAGGGCACCATCAGC...CCTGAGGATTGGAGGCCTCTCAAAGAAACACATTCCAACAGAACAGAGGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGGAGTTAGTAAAGTCGAGGCCTTTTCATGCTGCCTCTGTTCTGTTGGATCGGCCCCAGGAAGATaGATGGGAACTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGVSKVEAFSCCLCSVGSAPGR*MGTPPA Trigger: AGCTGGAGGAGTTCCCATCCATCTTCCTGGGGCCGA...TCCAACAGAACAGAGGCAGCATGAAAAGGCCTCGACTTTACTAACTCCTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGGGCCACATGAGTCTAAGAAAACCAAAGCATCTCCCTTAGTCTTGAATGCTGATGGTGCCCTGTaGCGCCAGCACATGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WRGPHESKKTKASPLVLNADGAL*RQHMWG Trigger: GCCCCACATGTGCTGGCGGCACAGGGCACCATCAGC...ATTCAAGACTAAGGGAGATGCTTTGGTTTTCTTAGACTCATGTGGCCCTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 |
||
| CDS-3UTR TCA 90 bp | GGGCATTCTAGTCCTATCTGGGTGTCTGCCTACACACTAATTGGAGCATCATTCAGAGTCTGGCCTGTCTaGTTCTCTGTCTCGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GHSSPIWVSAYTLIGASFRVWPV*FSVSGP Trigger: AGGCCCCGAGACAGAGAATCAGACAGGCCAGACTCT...GAATGATGCTCCAATTAGTGTGTAGGCAGACACCCAGATAGGACTAGAATGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| CDS-3UTR TCA 90 bp | CACAGGTTCAATAAAATGGGCAGCCTCATTTCCTTTAAAGCTGCTAGGGTATGCCATGTGGGGCCAGGGTaGAGGGCACATCGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRFNKMGSLISFKAARVCHVGPG*RAHRSG Trigger: TCCTGAGCGATGTGCCCTTCACCCTGGCCCCACATG...GCATACCCTAGCAGCTTTAAAGGAAATGAGGCTGCCCATTTTATTGAACCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCAGGAGTTAGTAAAGTCGAGGCCTTTTCATGCTGCCTCTGTTCTGTTGGATGGATGTGTCTTCTTTaGCGGTCTCCAAAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GAGVSKVEAFSCCLCSVGWMCLL*RSPKPG Trigger: GCCAGGCTTTGGAGACCGGCAAAGAAGACACATCCA...TCCAACAGAACAGAGGCAGCATGAAAAGGCCTCGACTTTACTAACTCCTGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| CDS-3UTR GCA 90 bp | ACACGTGGTCAGGAAGGACCCACAGGACAGTTCTCTAGAAAGGGCTTCAACACATGGATGTGTCTTCTTTaGCGGTCTCCAAAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TRGQEGPTGQFSRKGFNTWMCLL*RSPKPG Trigger: GCCAGGCTTTGGAGACCGGCAAAGAAGACACATCCA...TGTGTTGAAGCCCTTTCTAGAGAACTGTCCTGTGGGTCCTTCCTGACCACGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTACTTGGAATAAACAGTGGGCATTCTAGTCCTATCTGGGTGTCTGCCTACAGAGTCTGGCCTGTCTaGTTCTCTGTCTCGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLGINSGHSSPIWVSAYRVWPV*FSVSGP Trigger: AGGCCCCGAGACAGAGAATCAGACAGGCCAGACTCT...GTAGGCAGACACCCAGATAGGACTAGAATGCCCACTGTTTATTCCAAGTAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCAGGAGTTAGTAAAGTCGAGGCCTTTTCATGCTGCCTCTGTTCTGTTGGAGGGCTTTTTGGATTCTaGAGGCTTTCGGAAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GAGVSKVEAFSCCLCSVGGLFGF*RLSEEV Trigger: CACTTCTTCCGAAAGCCTGCAGAATCCAAAAAGCCC...TCCAACAGAACAGAGGCAGCATGAAAAGGCCTCGACTTTACTAACTCCTGCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| CDS-3UTR GCA 90 bp | GGGCATTCTAGTCCTATCTGGGTGTCTGCCTACACACTAATTGGAGCATCATTCTGGATGTGTCTTCTTTaGCGGTCTCCAAAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GHSSPIWVSAYTLIGASFWMCLL*RSPKPG Trigger: GCCAGGCTTTGGAGACCGGCAAAGAAGACACATCCA...GAATGATGCTCCAATTAGTGTGTAGGCAGACACCCAGATAGGACTAGAATGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 |
||
| CDS-3UTR CCA 90 bp | TTAGACCACATGGTTGGTCTGGCATTGGTAACAGCAGCCAAACAAAGAGGCATTGCCCAGAGGGCTTTTTaGATTCTGCAGGCTTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LDHMVGLALVTAAKQRGIAQRAF*ILQAFG Trigger: TCCGAAAGCCTGCAGAATCCAAAAAGCCCTCTGGGC...AATGCCTCTTTGTTTGGCTGCTGTTACCAATGCCAGACCAACCATGTGGTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| CDS-3UTR CCA 90 bp | AACTCTCTTAGTCGTGTACTGACCGACAGCAATCCTGCTCAGCTTTACTTGGAAGCCCAGAGGGCTTTTTaGATTCTGCAGGCTTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: NSLSRVLTDSNPAQLYLEAQRAF*ILQAFG Trigger: TCCGAAAGCCTGCAGAATCCAAAAAGCCCTCTGGGC...TTCCAAGTAAAGCTGAGCAGGATTGCTGTCGGTCAGTACACGACTAAGAGAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTACTTGGAATAAACAGTGGGCATTCTAGTCCTATCTGGGTGTCTGCCTACGCCCAGAGGGCTTTTTaGATTCTGCAGGCTTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALLGINSGHSSPIWVSAYAQRAF*ILQAFG Trigger: TCCGAAAGCCTGCAGAATCCAAAAAGCCCTCTGGGC...GTAGGCAGACACCCAGATAGGACTAGAATGCCCACTGTTTATTCCAAGTAAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCGAGGGAAGTTCTTGTTTCTCTTTCACTGTTGTGTCAGCAAAAACACCCCGGTCTCCAAAGCCTaGCTGCCTTCTGCTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TERGKFLFLFHCCVSKNTPVSKA*LPSASE Trigger: TTCTGAAGCAGAAGGCAGCCAGGCTTTGGAGACCGG...GGTGTTTTTGCTGACACAACAGTGAAAGAGAAACAAGAACTTCCCTCGCTCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 |
||
| CDS-3UTR CCA 90 bp | GGGCATTCTAGTCCTATCTGGGTGTCTGCCTACACACTAATTGGAGCATCATTCCTGATACAGTCACGCTaGATGTGTCTTCTTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GHSSPIWVSAYTLIGASFLIQSR*MCLLCR Trigger: CCGGCAAAGAAGACACATCCAGCGTGACTGTATCAG...GAATGATGCTCCAATTAGTGTGTAGGCAGACACCCAGATAGGACTAGAATGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTACTTGGAATAAACAGTGGGCATTCTAGTCCTATCTGGGTGTCTGCCTACCTGATACAGTCACGCTaGATGTGTCTTCTTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLGINSGHSSPIWVSAYLIQSR*MCLLCR Trigger: CCGGCAAAGAAGACACATCCAGCGTGACTGTATCAG...GTAGGCAGACACCCAGATAGGACTAGAATGCCCACTGTTTATTCCAAGTAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
||
| CDS-3UTR TCA 90 bp | CTAACATCAAAGCAAACTTCTGTTTTATTACTTACTCAAGGGTGCCTGTGCCATAGAGTCTGGCCTGTCTaGTTCTCTGTCTCGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTSKQTSVLLLTQGCLCHRVWPV*FSVSGP Trigger: AGGCCCCGAGACAGAGAATCAGACAGGCCAGACTCT...ATGGCACAGGCACCCTTGAGTAAGTAATAAAACAGAAGTTTGCTTTGATGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
||
| CDS-3UTR TCA 90 bp | CTCCACAATTGGACTTTTATCACATGGGGAAATATGAGTGGTCTGAATCCATATAGAGTCTGGCCTGTCTaGTTCTCTGTCTCGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHNWTFITWGNMSGLNPYRVWPV*FSVSGP Trigger: AGGCCCCGAGACAGAGAATCAGACAGGCCAGACTCT...ATATGGATTCAGACCACTCATATTTCCCCATGTGATAAAAGTCCAATTGTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| CDS-3UTR TCA 90 bp | CTAACATCAAAGCAAACTTCTGTTTTATTACTTACTCAAGGGTGCCTGTGCCATGGGAACTCCTCCAGCTaGTGGAACACGGTGGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: LTSKQTSVLLLTQGCLCHGNSSS*WNTVGD Trigger: ATCACCCACCGTGTTCCATCAGCTGGAGGAGTTCCC...ATGGCACAGGCACCCTTGAGTAAGTAATAAAACAGAAGTTTGCTTTGATGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| CDS-3UTR GCA 90 bp | AACTCTCTTAGTCGTGTACTGACCGACAGCAATCCTGCTCAGCTTTACTTGGAAGGGCTTTTTGGATTCTaGAGGCTTTCGGAAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NSLSRVLTDSNPAQLYLEGLFGF*RLSEEV Trigger: CACTTCTTCCGAAAGCCTGCAGAATCCAAAAAGCCC...TTCCAAGTAAAGCTGAGCAGGATTGCTGTCGGTCAGTACACGACTAAGAGAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR CAA 72 bp | GTAAAGTCGAGGCCTTTTCATGCTGCCTCTGTTCTGTaGGAATGTGTTTCTTTGAGAGGCCTCCAATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VKSRPFHAASVL*ECVSLRGLQSS Trigger: TGAGGATTGGAGGCCTCTCAAAGAAACACATTCCAACAGAACAGAGGCAGCATGAAAAGGCCTCGACTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| CDS-3UTR GCA 90 bp | AGCGAGGGAAGTTCTTGTTTCTCTTTCACTGTTGTGTCAGCAAAAACACCCTGTTCTCCAAAGCCTGGCTaGCTTCTGCTTCAGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SEGSSCFSFTVVSAKTPCSPKPG*LLLQKF Trigger: AAACTTCTGAAGCAGAAGGCAGCCAGGCTTTGGAGA...ACAGGGTGTTTTTGCTGACACAACAGTGAAAGAGAAACAAGAACTTCCCTCGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 |
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| 3UTR CAA 72 bp | TTTTCAAGAGTGAAATCATACCAGAATCGGGACAAGTaGTCGCCGACATCGTATGAGAGTACGTGGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSRVKSYQNRDK*SPTSYESTWSG Trigger: TCCTGACCACGTACTCTCATACGATGTCGGCGACAACTTGTCCCGATTCTGGTATGATTTCACTCTTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
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| CDS-3UTR GCA 90 bp | TGGAGAGGGCCACATGAGTCTAAGAAAACCAAAGCATCTCCCTTAGTCTTGAATAGCCTGGCTGCCTTCTaGTTCAGAAGTTTTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: WRGPHESKKTKASPLVLNSLAAF*FRSFTS Trigger: AGATGTAAAACTTCTGAAGCAGAAGGCAGCCAGGCT...ATTCAAGACTAAGGGAGATGCTTTGGTTTTCTTAGACTCATGTGGCCCTCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 |
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| CDS-3UTR GCA 90 bp | TTTTCATGCTGCCTCTGTTCTGTTGGAATGTGTTTCTTTGAGAGGCCTCCAATCAGCCTGGCTGCCTTCTaGTTCAGAAGTTTTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: FSCCLCSVGMCFFERPPISLAAF*FRSFTS Trigger: AGATGTAAAACTTCTGAAGCAGAAGGCAGCCAGGCT...GATTGGAGGCCTCTCAAAGAAACACATTCCAACAGAACAGAGGCAGCATGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| CDS-3UTR CCA 90 bp | GAACATCACACAGGTTCAATAAAATGGGCAGCCTCATTTCCTTTAAAGCTGCTACTGATACAGTCACGCTaGATGTGTCTTCTTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EHHTGSIKWAASFPLKLLLIQSR*MCLLCR Trigger: CCGGCAAAGAAGACACATCCAGCGTGACTGTATCAG...TAGCAGCTTTAAAGGAAATGAGGCTGCCCATTTTATTGAACCTGTGTGATGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| 3UTR CAA 72 bp | CATGAGTCTAAGAAAACCAAAGCATCTCCCTTAGTCTaGAATCAGCAAAGAAGGGCTGGTGTTTCGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HESKKTKASPLV*NQQRRAGVSKR Trigger: CCTCTTCGAAACACCAGCCCTTCTTTGCTGATTCAAGACTAAGGGAGATGCTTTGGTTTTCTTAGACTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| CDS-3UTR GCA 90 bp | GAACATCACACAGGTTCAATAAAATGGGCAGCCTCATTTCCTTTAAAGCTGCTAGGGCTTTTTGGATTCTaGAGGCTTTCGGAAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EHHTGSIKWAASFPLKLLGLFGF*RLSEEV Trigger: CACTTCTTCCGAAAGCCTGCAGAATCCAAAAAGCCC...TAGCAGCTTTAAAGGAAATGAGGCTGCCCATTTTATTGAACCTGTGTGATGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| CDS-3UTR GCA 90 bp | CTAACATCAAAGCAAACTTCTGTTTTATTACTTACTCAAGGGTGCCTGTGCCATTCTCCAAAGCCTGGCTaGCTTCTGCTTCAGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTSKQTSVLLLTQGCLCHSPKPG*LLLQKF Trigger: AAACTTCTGAAGCAGAAGGCAGCCAGGCTTTGGAGA...ATGGCACAGGCACCCTTGAGTAAGTAATAAAACAGAAGTTTGCTTTGATGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| CDS-3UTR GCA 90 bp | CTCCACAATTGGACTTTTATCACATGGGGAAATATGAGTGGTCTGAATCCATATTCTCCAAAGCCTGGCTaGCTTCTGCTTCAGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHNWTFITWGNMSGLNPYSPKPG*LLLQKF Trigger: AAACTTCTGAAGCAGAAGGCAGCCAGGCTTTGGAGA...ATATGGATTCAGACCACTCATATTTCCCCATGTGATAAAAGTCCAATTGTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 |
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| CDS-3UTR GCA 90 bp | ATTTCTATTTCAGTTCTATGGCAAGTATTTCTGGAGGTGGCTCACCCAGCAAGGGGTACTTTTCCCAGATaGAAAGTAGTCATGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ISISVLWQVFLEVAHPARGTFPR*KVVMQN Trigger: ATTCTGCATGACTACTTTGCATCTGGGAAAAGTACC...CCTTGCTGGGTGAGCCACCTCCAGAAATACTTGCCATAGAACTGAAATAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| CDS-3UTR CCA 90 bp | ACATGGATAGTTAAAAAGGATGTACCATCACAGAAGTGCTACAAAATGTTCACAGCCCAGAGGGCTTTTTaGATTCTGCAGGCTTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TWIVKKDVPSQKCYKMFTAQRAF*ILQAFG Trigger: TCCGAAAGCCTGCAGAATCCAAAAAGCCCTCTGGGC...TGTGAACATTTTGTAGCACTTCTGTGATGGTACATCCTTTTTAACTATCCATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| CDS-3UTR CCA 90 bp | TGGGCTACTGGTATACTTCATAGGTGTGTGGAAATATGTCATCTATACATTTTGCTGATACAGTCACGCTaGATGTGTCTTCTTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: WATGILHRCVEICHLYILLIQSR*MCLLCR Trigger: CCGGCAAAGAAGACACATCCAGCGTGACTGTATCAG...CAAAATGTATAGATGACATATTTCCACACACCTATGAAGTATACCAGTAGCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| CDS-3UTR TCA 90 bp | CAAAAACACCCTGTGCCTCTCATATACTCTCCACAATTGGACTTTTATCACATGCTGAATTTTCAAGAGTaGAATCATACCAGAATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QKHPVPLIYSPQLDFYHMLNFQE*NHTRIG Trigger: CCCGATTCTGGTATGATTTCACTCTTGAAAATTCAG...CATGTGATAAAAGTCCAATTGTGGAGAGTATATGAGAGGCACAGGGTGTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 |
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| CDS-3UTR GCA 90 bp | CTCCACAATTGGACTTTTATCACATGGGGAAATATGAGTGGTCTGAATCCATATTGGATGTGTCTTCTTTaGCGGTCTAAGAGGACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LHNWTFITWGNMSGLNPYWMCLL*RSKRTN Trigger: ATTTGTCCTCTTAGACCGGCAAAGAAGACACATCCA...ATATGGATTCAGACCACTCATATTTCCCCATGTGATAAAAGTCCAATTGTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
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| 3UTR CAA 72 bp | TGGTGTTTCGAAGAGGTTTCAATTTTCCCTAGTGGTTaGTCTGACCTCATTCATAAACACTGTGAGAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: WCFEEVSIFPSG*SDLIHKHCESN Trigger: GTTACTCTCACAGTGTTTATGAATGAGGTCAGACAAACCACTAGGGAAAATTGAAACCTCTTCGAAACACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| CDS CCA 90 bp | TCTGGCCTGTCTGATTCTCTGTCTCGGGGCCTGATACAGTCACGCTaGATGTGTCTTCTTTGCCGGTCTCCAAAGCCTGGCTGCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGLSDSLSRGLIQSR*MCLLCRSPKPGCLL Trigger: CAGAAGGCAGCCAGGCTTTGGAGACCGGCAAAGAAGACACATCCAGCGTGACTGTATCAGGCCCCGAGACAGAGAATCAGACAGGCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000159168.3 ENSMUST00000159335.8 ENSMUST00000159378.8 ENSMUST00000159433.8 |
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| CDS CCA 90 bp | TCTGGCCTGTCTGATTCTCTGTCTCGGGGCCTGATACAGTCACGCTaGATGTGTCTTCTTTGCCGGTCTGGCTGTGGGTGTCTGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGLSDSLSRGLIQSR*MCLLCRSGCGCLHL Trigger: CAGATGCAGACACCCACAGCCAGACCGGCAAAGAAGACACATCCAGCGTGACTGTATCAGGCCCCGAGACAGAGAATCAGACAGGCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160705.8 |
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| CDS CCA 90 bp | ATGCAGAATCGGGACAAGTTGTCGCCGACATCGTATGAGAGTACGTaGTCAGGAAGGTCGCTGATGGTGCCCTGTGCCGCCAGCACATGT | + |
|
Preference number: 5 (lower is better) Translates to: MQNRDKLSPTSYEST*SGRSLMVPCAASTC Trigger: ACATGTGCTGGCGGCACAGGGCACCATCAGCGACCTTCCTGACCACGTACTCTCATACGATGTCGGCGACAACTTGTCCCGATTCTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| CDS TCA 90 bp | GTTGTTCTGCAGAGTCTGGCCTGTCTGATTCTCTGTCTCGGGGCCTaGTACAGTCACGCTGGATGTGTCTTCTTTGCCGGTCTGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VVLQSLACLILCLGA*YSHAGCVFFAGLAV Trigger: CACAGCCAGACCGGCAAAGAAGACACATCCAGCGTGACTGTATCAGGCCCCGAGACAGAGAATCAGACAGGCCAGACTCTGCAGAACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160705.8 |
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| CDS TCA 90 bp | CAAAGTAGTCATGCAGAATCGGGACAAGTTGTCGCCGACATCGTATaGGAGTACGTGGTCAGGAAGGTCGCTGATGGTGCCCTGTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QSSHAESGQVVADIV*EYVVRKVADGALCR Trigger: GCGGCACAGGGCACCATCAGCGACCTTCCTGACCACGTACTCTCATACGATGTCGGCGACAACTTGTCCCGATTCTGCATGACTACTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| CDS GCA 90 bp | TCTCTGTCTCGGGGCCTGATACAGTCACGCTGGATGTGTCTTCTTTaGCGGTCTAAGAGGACAAATCCATCTGCTTCCGGTTCCGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSRGLIQSRWMCLL*RSKRTNPSASGSGP Trigger: TGGGCCGGAACCGGAAGCAGATGGATTTGTCCTCTTAGACCGGCAAAGAAGACACATCCAGCGTGACTGTATCAGGCCCCGAGACAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
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| CDS CCA 90 bp | CCTGATACAGTCACGCTGGATGTGTCTTCTTTGCCGGTCTGGCTGTaGGTGTCTGCATCTGTTCCCATCTGCTGCCAAAGAGAGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PDTVTLDVSSLPVWL*VSASVPICCQREPL Trigger: GAGAGGCTCTCTTTGGCAGCAGATGGGAACAGATGCAGACACCCACAGCCAGACCGGCAAAGAAGACACATCCAGCGTGACTGTATCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160705.8 |
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| CDS TCA 90 bp | GTTGTTCTGCAGAGTCTGGCCTGTCTGATTCTCTGTCTCGGGGCCTaGTACAGTCACGCTGGATGTGTCTTCTTTGCCGGTCTCCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVLQSLACLILCLGA*YSHAGCVFFAGLQS Trigger: GCTTTGGAGACCGGCAAAGAAGACACATCCAGCGTGACTGTATCAGGCCCCGAGACAGAGAATCAGACAGGCCAGACTCTGCAGAACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000159168.3 ENSMUST00000159335.8 ENSMUST00000159378.8 ENSMUST00000159433.8 |
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| CDS TCA 90 bp | AGGAGCTCAGCTGTTAGTGAGTTGTTCTGCAGAGTCTGGCCTGTCTaGTTCTCTGTCTCGGGGCCTGATACAGTCACGCTGGATGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RSSAVSELFCRVWPV*FSVSGPDTVTLDVS Trigger: AGACACATCCAGCGTGACTGTATCAGGCCCCGAGACAGAGAATCAGACAGGCCAGACTCTGCAGAACAACTCACTAACAGCTGAGCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000159168.3 ENSMUST00000159335.8 ENSMUST00000159378.8 ENSMUST00000159433.8 ENSMUST00000160705.8 |
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| CDS TCA 90 bp | GTTGTTCTGCAGAGTCTGGCCTGTCTGATTCTCTGTCTCGGGGCCTaGTACAGTCACGCTGGATGTGTCTTCTTTGCCGGTCTAAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VVLQSLACLILCLGA*YSHAGCVFFAGLRG Trigger: TCCTCTTAGACCGGCAAAGAAGACACATCCAGCGTGACTGTATCAGGCCCCGAGACAGAGAATCAGACAGGCCAGACTCTGCAGAACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
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| CDS CCA 90 bp | TCTGGCCTGTCTGATTCTCTGTCTCGGGGCCTGATACAGTCACGCTaGATGTGTCTTCTTTGCCGGTCTAAGAGGACAAATCCATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGLSDSLSRGLIQSR*MCLLCRSKRTNPSA Trigger: AGCAGATGGATTTGTCCTCTTAGACCGGCAAAGAAGACACATCCAGCGTGACTGTATCAGGCCCCGAGACAGAGAATCAGACAGGCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
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| CDS-3UTR CAA 90 bp | TTACTTGGAATAAACAGTGGGCATTCTAGTCCTATCTGGGTGTCTGCCTACACAGGCCCAGAGGGCTTTTaGGATTCTGCAGGCTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLGINSGHSSPIWVSAYTGPEGF*DSAGFR Trigger: CCGAAAGCCTGCAGAATCCAAAAAGCCCTCTGGGCC...TGTGTAGGCAGACACCCAGATAGGACTAGAATGCCCACTGTTTATTCCAAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| CDS-3UTR CAA 90 bp | TTTTCATGCTGCCTCTGTTCTGTTGGAATGTGTTTCTTTGAGAGGCCTCCAATCGGCCCAGAGGGCTTTTaGGATTCTGCAGGCTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: FSCCLCSVGMCFFERPPIGPEGF*DSAGFR Trigger: CCGAAAGCCTGCAGAATCCAAAAAGCCCTCTGGGCC...GATTGGAGGCCTCTCAAAGAAACACATTCCAACAGAACAGAGGCAGCATGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| CDS-3UTR CAA 90 bp | TGGAGAGGGCCACATGAGTCTAAGAAAACCAAAGCATCTCCCTTAGTCTTGAATGGCCCAGAGGGCTTTTaGGATTCTGCAGGCTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: WRGPHESKKTKASPLVLNGPEGF*DSAGFR Trigger: CCGAAAGCCTGCAGAATCCAAAAAGCCCTCTGGGCC...ATTCAAGACTAAGGGAGATGCTTTGGTTTTCTTAGACTCATGTGGCCCTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000159168.3 ENSMUST00000159433.8 ENSMUST00000162034.8 |
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| CDS CCA 90 bp | GATACAGTCACGCTGGATGTGTCTTCTTTGCCGGTCTCCAAAGCCTaGCTGCCTTCTGCTTCAGAAGTTTTACATCTCACTTCATTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: DTVTLDVSSLPVSKA*LPSASEVLHLTSFA Trigger: AGCAAATGAAGTGAGATGTAAAACTTCTGAAGCAGAAGGCAGCCAGGCTTTGGAGACCGGCAAAGAAGACACATCCAGCGTGACTGTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000159168.3 ENSMUST00000159335.8 ENSMUST00000159378.8 ENSMUST00000159433.8 |
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| CDS TCA 72 bp | CAGAGTCTGGCCTGTCTGATTCTCTGTCTCGGGGCCTaGTACAGTCACGCTGGATGTGTCTTCTTTGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: QSLACLILCLGA*YSHAGCVFFAG Trigger: ACCGGCAAAGAAGACACATCCAGCGTGACTGTATCAGGCCCCGAGACAGAGAATCAGACAGGCCAGACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000159168.3 ENSMUST00000159335.8 ENSMUST00000159378.8 ENSMUST00000159433.8 ENSMUST00000160705.8 ENSMUST00000162034.8 |
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| CDS CCA 72 bp | GTCACGCTGGATGTGTCTTCTTTGCCGGTCTGGCTGTaGGTGTCTGCATCTGTTCCCATCTGCTGCCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VTLDVSSLPVWL*VSASVPICCQR Trigger: TCTTTGGCAGCAGATGGGAACAGATGCAGACACCCACAGCCAGACCGGCAAAGAAGACACATCCAGCGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160705.8 |
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| CDS CCA 72 bp | TCTGATTCTCTGTCTCGGGGCCTGATACAGTCACGCTaGATGTGTCTTCTTTGCCGGTCTGGCTGTGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SDSLSRGLIQSR*MCLLCRSGCGC Trigger: ACACCCACAGCCAGACCGGCAAAGAAGACACATCCAGCGTGACTGTATCAGGCCCCGAGACAGAGAATCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160705.8 |
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| CDS TCA 72 bp | GCTGTTAGTGAGTTGTTCTGCAGAGTCTGGCCTGTCTaGTTCTCTGTCTCGGGGCCTGATACAGTCACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AVSELFCRVWPV*FSVSGPDTVTL Trigger: CAGCGTGACTGTATCAGGCCCCGAGACAGAGAATCAGACAGGCCAGACTCTGCAGAACAACTCACTAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000159168.3 ENSMUST00000159335.8 ENSMUST00000159378.8 ENSMUST00000159433.8 ENSMUST00000160705.8 ENSMUST00000162034.8 |
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| CDS GCA 72 bp | CGGGGCCTGATACAGTCACGCTGGATGTGTCTTCTTTaGCGGTCTAAGAGGACAAATCCATCTGCTTCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: RGLIQSRWMCLL*RSKRTNPSASG Trigger: ACCGGAAGCAGATGGATTTGTCCTCTTAGACCGGCAAAGAAGACACATCCAGCGTGACTGTATCAGGCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
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| CDS TCA 72 bp | AAAGAGAGCCTCTCTGATGGTGACTGGATAAGGCACTaGTCTCCAAAGCCTGGCTGCCTTCTGCTTCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KESLSDGDWIRH*SPKPGCLLLQK Trigger: CTTCTGAAGCAGAAGGCAGCCAGGCTTTGGAGATCAGTGCCTTATCCAGTCACCATCAGAGAGGCTCTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160705.8 |
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| CDS CCA 72 bp | AGATGGATGGGAACTCCTCCAGCTGATGGAACACGGTaGGTGATGAGGATGGTACTTTTCCCAGATGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RWMGTPPADGTR*VMRMVLFPDAK Trigger: CTTTGCATCTGGGAAAAGTACCATCCTCATCACCCACCGTGTTCCATCAGCTGGAGGAGTTCCCATCCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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| CDS CCA 72 bp | TCTGATTCTCTGTCTCGGGGCCTGATACAGTCACGCTaGATGTGTCTTCTTTGCCGGTCTAAGAGGACAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SDSLSRGLIQSR*MCLLCRSKRTN Trigger: ATTTGTCCTCTTAGACCGGCAAAGAAGACACATCCAGCGTGACTGTATCAGGCCCCGAGACAGAGAATCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162034.8 |
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| CDS GCA 72 bp | AACACGGTGGGTGATGAGGATGGTACTTTTCCCAGATaGAAAGTAGTCATGCAGAATCGGGACAAGTTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: NTVGDEDGTFPR*KVVMQNRDKLS Trigger: CGACAACTTGTCCCGATTCTGCATGACTACTTTGCATCTGGGAAAAGTACCATCCTCATCACCCACCGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159335.8 |
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