Pregenerated sensors for ULK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032308Ensembl transcript IDs: ENSMUST00000053230.7, ENSMUST00000215748.2
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGAAGACCCAGCCAAGACCCAGCTCTAGCTCAGGGTCCACCATGTaGCTAGTGTGGCATATCCCCTCAAAGAGAGCTGTAAGTGGGGGT | + |
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Preference number: 1 (lower is better) Translates to: GKTQPRPSSSSGSTM*LVWHIPSKRAVSGG Trigger: ACCCCCACTTACAGCTCTCTTTGAGGGGATATGCCACACTAGTCACATGGTGGACCCTGAGCTAGAGCTGGGTCTTGGCTGGGTCTTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR GCA 90 bp | GGGAACCAGCATGTGGGAGCTGCTCGTCCAGGAAGGTCCCAGGTGTaGAGGTGTCAACCTGAGTTGGTAATGCAGCTTCTCTCTAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: GNQHVGAARPGRSQV*RCQPELVMQLLSRV Trigger: AACCCTAGAGAGAAGCTGCATTACCAACTCAGGTTGACACCTGCACACCTGGGACCTTCCTGGACGAGCAGCTCCCACATGCTGGTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR GCA 90 bp | AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGTCTCAGTaGCTGTCATTTGGGGGTCATTTGTGGCAGAACAGCTCCTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: KEGRKEGRKEERKSQ*LSFGGHLWQNSSSA Trigger: AGCAGAGGAGCTGTTCTGCCACAAATGACCCCCAAATGACAGGCACTGAGACTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR GCA 90 bp | AGTCTTTACATACATCCAGCCTCTAGCAAGGAGGGTGTTCCATTTTaGCCTAAGGAGGCGGTTAAGGGCAGAATGATTGAAAATCACCAG | + |
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Preference number: 1 (lower is better) Translates to: SLYIHPASSKEGVPF*PKEAVKGRMIENHQ Trigger: CTGGTGATTTTCAATCATTCTGCCCTTAACCGCCTCCTTAGGGCAAAATGGAACACCCTCCTTGCTAGAGGCTGGATGTATGTAAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR CCA 90 bp | AAGGAAGAAAGAAAGTCTCAGTGCCTGTCATTTGGGGGTCATTTGTaGCAGAACAGCTCCTCTGCTCCTTATTCAAAAATCAGCCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: KEERKSQCLSFGGHL*QNSSSAPYSKISLQ Trigger: TTGAAGGCTGATTTTTGAATAAGGAGCAGAGGAGCTGTTCTGCCACAAATGACCCCCAAATGACAGGCACTGAGACTTTCTTTCTTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR-3UTR CCA 90 bp | CTCAAAGAGAGCTGTAAGTGGGGGTATGAGGACCCCTCCTCCATGCCAAGGCAGGCTCCCAGGGAGGGGTaGCCCAGGTACAGCAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LKESCKWGYEDPSSMPRQAPREG*PRYSSC Trigger: ACAGCTGCTGTACCTGGGCCACCCCTCCCTGGGAGC...CTGCCTTGGCATGGAGGAGGGGTCCTCATACCCCCACTTACAGCTCTCTTTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR CAA 90 bp | GCTGCTCGTCCAGGAAGGTCCCAGGTGTGCAGGTGTCAACCTGAGTaGGTAATGCAGCTTCTCTCTAGGGTTGTGCTCCATCCGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: AARPGRSQVCRCQPE*VMQLLSRVVLHPLL Trigger: GAGCAGCGGATGGAGCACAACCCTAGAGAGAAGCTGCATTACCAACTCAGGTTGACACCTGCACACCTGGGACCTTCCTGGACGAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR-3UTR CCA 90 bp | AGTCTTTACATACATCCAGCCTCTAGCAAGGAGGGTGTTCCATTTTGCCCTAAGCACTCAGAGGAATGCTaGGAACCAGCATGTGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: SLYIHPASSKEGVPFCPKHSEEC*EPACGS Trigger: GCTCCCACATGCTGGTTCCCAGCATTCCTCTGAGTG...CTTAGGGCAAAATGGAACACCCTCCTTGCTAGAGGCTGGATGTATGTAAAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR CAA 90 bp | GGAAGGAAGGAAGGAAGGAAGAAAGAAAGTCTCAGTGCCTGTCATTaGGGGGTCATTTGTGGCAGAACAGCTCCTCTGCTCCTTATTCAA | + |
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Preference number: 2 (lower is better) Translates to: GRKEGRKKESLSACH*GVICGRTAPLLLIQ Trigger: TTGAATAAGGAGCAGAGGAGCTGTTCTGCCACAAATGACCCCCAAATGACAGGCACTGAGACTTTCTTTCTTCCTTCCTTCCTTCCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGGAAGGAAGGAAGAAAGAAAGTCTCAGTGCCTGTCATTTGGGGGTCATGTGCAGGTGTCAACCTaGGTTGGTAATGCAGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: KEGRKEERKSQCLSFGGHVQVST*VGNAAS Trigger: AGAAGCTGCATTACCAACTCAGGTTGACACCTGCAC...ATGACCCCCAAATGACAGGCACTGAGACTTTCTTTCTTCCTTCCTTCCTTCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR-3UTR TCA 90 bp | AACTTTAGAAATAACCCTTCACACACACACACACACACACACACACACACACACAAAGGATGGCAGCTCTaGGCTCGCAGGAAGACTGGA | + |
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Preference number: 2 (lower is better) Translates to: NFRNNPSHTHTHTHTHTHKGWQL*ARRKTG Trigger: TCCAGTCTTCCTGCGAGCTCAGAGCTGCCATCCTTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAGGGTTATTTCTAAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR CAA 90 bp | AGGAAGGAAGAAAGAAAGTCTCAGTGCCTGTCATTTGGGGGTCATTaGTGGCAGAACAGCTCCTCTGCTCCTTATTCAAAAATCAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: RKEERKSQCLSFGGH*WQNSSSAPYSKISL Trigger: AAGGCTGATTTTTGAATAAGGAGCAGAGGAGCTGTTCTGCCACAAATGACCCCCAAATGACAGGCACTGAGACTTTCTTTCTTCCTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR-3UTR TCA 90 bp | GCGGTTAAGGGCAGAATGATTGAAAATCACCAGTATTCTCTAACTTTAGAAATACAAAACACAACGGGGTaGTGGTGTCCTGAAGCCGGA | + |
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Preference number: 2 (lower is better) Translates to: AVKGRMIENHQYSLTLEIQNTTG*WCPEAG Trigger: TCCGGCTTCAGGACACCATCACCCCGTTGTGTTTTG...TATTTCTAAAGTTAGAGAATACTGGTGATTTTCAATCATTCTGCCCTTAACCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR-3UTR TCA 90 bp | AGTCTTTACATACATCCAGCCTCTAGCAAGGAGGGTGTTCCATTTTGCCCTAAGCATGACTTTCATGCATaGAGGATTGTCTTAAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: SLYIHPASSKEGVPFCPKHDFHA*RIVLKN Trigger: GTTCTTTAAGACAATCCTTCATGCATGAAAGTCATG...CTTAGGGCAAAATGGAACACCCTCCTTGCTAGAGGCTGGATGTATGTAAAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGGCGGTTAAGGGCAGAATGATTGAAAATCACCAGTATTCTCTAACTTTACCTTTACAAAGGGCATaGCTTTCATGCATGAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: KEAVKGRMIENHQYSLTLPLQRA*LSCMKD Trigger: ATCCTTCATGCATGAAAGTCATGCCCTTTGTAAAGG...TAAAGTTAGAGAATACTGGTGATTTTCAATCATTCTGCCCTTAACCGCCTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR GCA 72 bp | CACTCAGAGGAATGCTGGGAACCAGCATGTGGGAGCTaGTCGTCCAGGAAGGTCCCAGGTGTGCAGGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: HSEECWEPACGS*SSRKVPGVQVS Trigger: TGACACCTGCACACCTGGGACCTTCCTGGACGAGCAGCTCCCACATGCTGGTTCCCAGCATTCCTCTGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR CCA 72 bp | AGACGCCCCAAGGGTGGAGAACACTCAGAGGAATGCTaGGAACCAGCATGTGGGAGCTGCTCGTCCAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: RRPKGGEHSEEC*EPACGSCSSRK Trigger: CTTCCTGGACGAGCAGCTCCCACATGCTGGTTCCCAGCATTCCTCTGAGTGTTCTCCACCCTTGGGGCGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR GCA 72 bp | CATGTGGGAGCTGCTCGTCCAGGAAGGTCCCAGGTGTaGAGGTGTCAACCTGAGTTGGTAATGCAGCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: HVGAARPGRSQV*RCQPELVMQLL Trigger: GAGAAGCTGCATTACCAACTCAGGTTGACACCTGCACACCTGGGACCTTCCTGGACGAGCAGCTCCCACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR CCA 72 bp | AAAAGTAGGGTTGGAATAAAGGCTCCCAGGGAGGGGTaGCCCAGGTACAGCAGCTGTCTGGTAGCAAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: KSRVGIKAPREG*PRYSSCLVASV Trigger: GACACTTGCTACCAGACAGCTGCTGTACCTGGGCCACCCCTCCCTGGGAGCCTTTATTCCAACCCTACTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR CCA 72 bp | CTGAAAAGGATGGCAGCTCTGAGCTCGCAGGAAGACTaGAGAGGTCTGAGAGCCGAGAGCATACTGTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: LKRMAALSSQED*RGLRAESILSG Trigger: ACCTGACAGTATGCTCTCGGCTCTCAGACCTCTCCAGTCTTCCTGCGAGCTCAGAGCTGCCATCCTTTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR TCA 72 bp | CAGCAGCTGTCTGGTAGCAAGTGTCCTGAAGAGGCATaGCGTCCTCTTTGCAGAACAAAACACAACGGGGTG | + |
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Preference number: 3 (lower is better) Translates to: QQLSGSKCPEEA*RPLCRTKHNGV Trigger: CACCCCGTTGTGTTTTGTTCTGCAAAGAGGACGTCATGCCTCTTCAGGACACTTGCTACCAGACAGCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR GCA 72 bp | AGGAAGGAAGGAAGGAAGGAAGAAAGAAAGTCTCAGTaGCTGTCATTTGGGGGTCATTTGTGGCAGAACAGC | + |
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Preference number: 3 (lower is better) Translates to: RKEGRKEERKSQ*LSFGGHLWQNS Trigger: GCTGTTCTGCCACAAATGACCCCCAAATGACAGGCACTGAGACTTTCTTTCTTCCTTCCTTCCTTCCTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR GCA 72 bp | ATACATCCAGCCTCTAGCAAGGAGGGTGTTCCATTTTaGCCTAAGGAGGCGGTTAAGGGCAGAATGATTGAA | + |
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Preference number: 3 (lower is better) Translates to: IHPASSKEGVPF*PKEAVKGRMIE Trigger: TTCAATCATTCTGCCCTTAACCGCCTCCTTAGGGCAAAATGGAACACCCTCCTTGCTAGAGGCTGGATGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR-3UTR CAA 90 bp | AAGGAGGCGGTTAAGGGCAGAATGATTGAAAATCACCAGTATTCTCTAACTTTAAGCTTCTCTCTAGGGTaGTGCTCCATCCGCTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: KEAVKGRMIENHQYSLTLSFSLG*CSIRCS Trigger: GGAGCAGCGGATGGAGCACAACCCTAGAGAGAAGCT...TAAAGTTAGAGAATACTGGTGATTTTCAATCATTCTGCCCTTAACCGCCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR-3UTR CAA 90 bp | TCATGCATGAAGGATTGTCTTAAAGAACTGAAAAGGATGGCAGCTCTGAGCTCGGGCATGACGTCCTCTTaGCAGAACAAAACACAACGG | + |
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Preference number: 3 (lower is better) Translates to: SCMKDCLKELKRMAALSSGMTSS*QNKTQR Trigger: CCGTTGTGTTTTGTTCTGCAAAGAGGACGTCATGCC...CGAGCTCAGAGCTGCCATCCTTTTCAGTTCTTTAAGACAATCCTTCATGCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR CCA 72 bp | AGAAAGTCTCAGTGCCTGTCATTTGGGGGTCATTTGTaGCAGAACAGCTCCTCTGCTCCTTATTCAAAAATC | + |
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Preference number: 3 (lower is better) Translates to: RKSQCLSFGGHL*QNSSSAPYSKI Trigger: GATTTTTGAATAAGGAGCAGAGGAGCTGTTCTGCCACAAATGACCCCCAAATGACAGGCACTGAGACTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR-3UTR CAA 90 bp | GAGGCGGTTAAGGGCAGAATGATTGAAAATCACCAGTATTCTCTAACTTTAGAAAGGTGTCAACCTGAGTaGGTAATGCAGCTTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: EAVKGRMIENHQYSLTLERCQPE*VMQLLS Trigger: AGAGAGAAGCTGCATTACCAACTCAGGTTGACACCT...TTCTAAAGTTAGAGAATACTGGTGATTTTCAATCATTCTGCCCTTAACCGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR GCA 72 bp | GTCATTTGGGGGTCATTTGTGGCAGAACAGCTCCTCTaGTCCTTATTCAAAAATCAGCCTTCAATAAGAATT | + |
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Preference number: 3 (lower is better) Translates to: VIWGSFVAEQLL*SLFKNQPSIRI Trigger: AATTCTTATTGAAGGCTGATTTTTGAATAAGGAGCAGAGGAGCTGTTCTGCCACAAATGACCCCCAAATGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR TCA 90 bp | GTGGAGAACACTCAGAGGAATGCTGGGAACCAGCATGTGGGAGCTGCTCGTCCACTTGGCCAGGGCAGCTaGGGCCACTTCCAGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VENTQRNAGNQHVGAARPLGQGS*GHFQGS Trigger: GCTGCCCTGGAAGTGGCCTCAGCTGCCCTGGCCAAG...TGGACGAGCAGCTCCCACATGCTGGTTCCCAGCATTCCTCTGAGTGTTCTCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CCA 90 bp | TGGGAACCAGCATGTGGGAGCTGCTCGTCCAGGAAGGTCCCAGGTGTGCAGGTGGCAGCATCCCCCTCCTaGTCCTTCTTCACAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: WEPACGSCSSRKVPGVQVAASPS*SFFTAS Trigger: GGAGGCTGTGAAGAAGGACCAGGAGGGGGATGCTGC...CACCTGCACACCTGGGACCTTCCTGGACGAGCAGCTCCCACATGCTGGTTCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | TGGGAACCAGCATGTGGGAGCTGCTCGTCCAGGAAGGTCCCAGGTGTGCAGGTGAGAAGTCCAGAGCCTTaGAGTAGAGCGACAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: WEPACGSCSSRKVPGVQVRSPEP*SRATGQ Trigger: CTGCCCTGTCGCTCTACTGCAAGGCTCTGGACTTCT...CACCTGCACACCTGGGACCTTCCTGGACGAGCAGCTCCCACATGCTGGTTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | TGGGAACCAGCATGTGGGAGCTGCTCGTCCAGGAAGGTCCCAGGTGTGCAGGTGGCTCTTGGACAGTTGTaGCCTGTCTTAGCAGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: WEPACGSCSSRKVPGVQVALGQL*PVLAGP Trigger: AGGCCCTGCTAAGACAGGGCACAACTGTCCAAGAGC...CACCTGCACACCTGGGACCTTCCTGGACGAGCAGCTCCCACATGCTGGTTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | AGCTCTGAGCTCGCAGGAAGACTGGAGAGGTCTGAGAGCCGAGAGCATACTGTCAGCTCCCCGAGGCTGTaGTGGTACAGGTCCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SSELAGRLERSESREHTVSSPRL*WYRSRA Trigger: TGCCCTGGACCTGTACCAGCACAGCCTCGGGGAGCT...GACAGTATGCTCTCGGCTCTCAGACCTCTCCAGTCTTCCTGCGAGCTCAGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CCA 90 bp | TGGGAACCAGCATGTGGGAGCTGCTCGTCCAGGAAGGTCCCAGGTGTGCAGGTGTTCAGCTGCACGATATaGGGGTGCCGAATGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: WEPACGSCSSRKVPGVQVFSCTI*GCRMPL Trigger: CAAGGGCATTCGGCACCCCCATATCGTGCAGCTGAA...CACCTGCACACCTGGGACCTTCCTGGACGAGCAGCTCCCACATGCTGGTTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CCA 90 bp | AGCTCTGAGCTCGCAGGAAGACTGGAGAGGTCTGAGAGCCGAGAGCATACTGTCCCAGGCTCTCCCCACTaGGCATGTGCTCCAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SSELAGRLERSESREHTVPGSPH*ACAPGP Trigger: TGGACCTGGAGCACATGCCCAGTGGGGAGAGCCTGG...GACAGTATGCTCTCGGCTCTCAGACCTCTCCAGTCTTCCTGCGAGCTCAGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CCA 90 bp | GTGGAGAACACTCAGAGGAATGCTGGGAACCAGCATGTGGGAGCTGCTCGTCCAGGCAGCCAGGAGGCGTaGTTTGTCACGGGCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: VENTQRNAGNQHVGAARPGSQEA*FVTGHL Trigger: GAGATGGCCCGTGACAAACCACGCCTCCTGGCTGCC...TGGACGAGCAGCTCCCACATGCTGGTTCCCAGCATTCCTCTGAGTGTTCTCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | GCCAAGGCAGGGAAGGTCTGGGGTTCTCACATGTATTCCACCTTTACAAAGGGCCACCACAAGGGCCCTTaGCTGTGCCAGGCTCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: AKAGKVWGSHMYSTFTKGHHKGP*LCQALP Trigger: GGGGAGAGCCTGGCACAGGCAAGGGCCCTTGTGGTG...GCCCTTTGTAAAGGTGGAATACATGTGAGAACCCCAGACCTTCCCTGCCTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | TGGGAACCAGCATGTGGGAGCTGCTCGTCCAGGAAGGTCCCAGGTGTGCAGGTGCACCTTCGCCTTAATTaGCTCCTTCCTCTGGGCATC | + |
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Preference number: 4 (lower is better) Translates to: WEPACGSCSSRKVPGVQVHLRLN*LLPLGI Trigger: GATGCCCAGAGGAAGGAGGCAATTAAGGCGAAGGTG...CACCTGCACACCTGGGACCTTCCTGGACGAGCAGCTCCCACATGCTGGTTCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CCA 90 bp | AAGGGTGGAGAACACTCAGAGGAATGCTGGGAACCAGCATGTGGGAGCTGCTCGAGGCCTTGTACACCGTaGCGTACGTGCCACTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: KGGEHSEECWEPACGSCSRPCTP*RTCHCP Trigger: TGGGCAGTGGCACGTACGCCACGGTGTACAAGGCCT...CGAGCAGCTCCCACATGCTGGTTCCCAGCATTCCTCTGAGTGTTCTCCACCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CCA 90 bp | AGCTTAATAGGACAGAGGGGAAGACCCAGCCAAGACCCAGCTCTAGCTCAGGGTTCCCCGAGGCTGTGCTaGTACAGGTCCAGGGCATCC | + |
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Preference number: 4 (lower is better) Translates to: SLIGQRGRPSQDPALAQGSPRLC*YRSRAS Trigger: GGATGCCCTGGACCTGTACCAGCACAGCCTCGGGGA...ACCCTGAGCTAGAGCTGGGTCTTGGCTGGGTCTTCCCCTCTGTCCTATTAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR TCA 90 bp | AGCTCTGAGCTCGCAGGAAGACTGGAGAGGTCTGAGAGCCGAGAGCATACTGTCTCCTGCGGGTATGAATaGAGCGAGACAGGTCACCCC | + |
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Preference number: 4 (lower is better) Translates to: SSELAGRLERSESREHTVSCGYE*SETGHP Trigger: GGGGTGACCTGTCTCGCTTCATTCATACCCGCAGGA...GACAGTATGCTCTCGGCTCTCAGACCTCTCCAGTCTTCCTGCGAGCTCAGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CCA 90 bp | GCCAAGGCAGGGAAGGTCTGGGGTTCTCACATGTATTCCACCTTTACAAAGGGCCAGCTTCCTCCTCCTTaGCCAGGGCAGCTGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: AKAGKVWGSHMYSTFTKGQLPPP*PGQLRP Trigger: TGGCCTCAGCTGCCCTGGCCAAGGAGGAGGAAGCTG...GCCCTTTGTAAAGGTGGAATACATGTGAGAACCCCAGACCTTCCCTGCCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CCA 90 bp | TCATGCAGGAACTGCAGGGCACTAGCCAACTGCTGCATGAAAACACGGGCCACCTTCAGCTGCACGATATaGGGGTGCCGAATGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SCRNCRALANCCMKTRATFSCTI*GCRMPL Trigger: CAAGGGCATTCGGCACCCCCATATCGTGCAGCTGAA...GGTGGCCCGTGTTTTCATGCAGCAGTTGGCTAGTGCCCTGCAGTTCCTGCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215748.2 |
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| CDS-3UTR TCA 90 bp | CTCAAAGAGAGCTGTAAGTGGGGGTATGAGGACCCCTCCTCCATGCCAAGGCAGGGTGCCGAATGCCCTTaGGGATCTCAATCTCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: LKESCKWGYEDPSSMPRQGAECP*GSQSQS Trigger: TGACTGAGATTGAGATCCTCAAGGGCATTCGGCACC...CTGCCTTGGCATGGAGGAGGGGTCCTCATACCCCCACTTACAGCTCTCTTTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR TCA 90 bp | AGCTCTGAGCTCGCAGGAAGACTGGAGAGGTCTGAGAGCCGAGAGCATACTGTCTGTCTTAGCAGGGCCTaGTTGGAGGAGGAGACAATG | + |
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Preference number: 4 (lower is better) Translates to: SSELAGRLERSESREHTVCLSRA*LEEETM Trigger: CATTGTCTCCTCCTCCAATCAGGCCCTGCTAAGACA...GACAGTATGCTCTCGGCTCTCAGACCTCTCCAGTCTTCCTGCGAGCTCAGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | AGTCTTTACATACATCCAGCCTCTAGCAAGGAGGGTGTTCCATTTTGCCCTAAGACACCGTGGCGTACGTaGCACTGCCCAGGCGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SLYIHPASSKEGVPFCPKTPWRT*HCPGAR Trigger: CCGAGCGCCTGGGCAGTGGCACGTACGCCACGGTGT...CTTAGGGCAAAATGGAACACCCTCCTTGCTAGAGGCTGGATGTATGTAAAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | ATGCAGGAACTGCAGGGCACTAGCCAACTGCTGCATGAAAACACGGGCCACCTTTGCACGATATGGGGGTaGCGAATGCCCTTGAGGATC | + |
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Preference number: 4 (lower is better) Translates to: MQELQGTSQLLHENTGHLCTIWG*RMPLRI Trigger: GATCCTCAAGGGCATTCGGCACCCCCATATCGTGCA...AAGGTGGCCCGTGTTTTCATGCAGCAGTTGGCTAGTGCCCTGCAGTTCCTGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215748.2 |
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| CDS-3UTR CCA 90 bp | AGTCTTTACATACATCCAGCCTCTAGCAAGGAGGGTGTTCCATTTTGCCCTAAGCTCCCGCCTTCGGCCTaGGGCCTCTGCTGCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLYIHPASSKEGVPFCPKLPPSA*GLCCQQ Trigger: CTGTTGGCAGCAGAGGCCCCAGGCCGAAGGCGGGAG...CTTAGGGCAAAATGGAACACCCTCCTTGCTAGAGGCTGGATGTATGTAAAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR TCA 90 bp | TCGTTCATGCAGGAACTGCAGGGCACTAGCCAACTGCTGCATGAAAACACGGGCGGTGCCGAATGCCCTTaGGGATCTCAATCTCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFMQELQGTSQLLHENTGGAECP*GSQSQS Trigger: TGACTGAGATTGAGATCCTCAAGGGCATTCGGCACC...GCCCGTGTTTTCATGCAGCAGTTGGCTAGTGCCCTGCAGTTCCTGCATGAACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215748.2 |
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| 3UTR CAA 72 bp | CCAGGAAGGTCCCAGGTGTGCAGGTGTCAACCTGAGTaGGTAATGCAGCTTCTCTCTAGGGTTGTGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGRSQVCRCQPE*VMQLLSRVVLH Trigger: ATGGAGCACAACCCTAGAGAGAAGCTGCATTACCAACTCAGGTTGACACCTGCACACCTGGGACCTTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | AGCTCTGAGCTCGCAGGAAGACTGGAGAGGTCTGAGAGCCGAGAGCATACTGTCGAGATGTTTCGTTCATaGAGGAACTGCAGGGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SSELAGRLERSESREHTVEMFRS*RNCRAL Trigger: TAGTGCCCTGCAGTTCCTGCATGAACGAAACATCTC...GACAGTATGCTCTCGGCTCTCAGACCTCTCCAGTCTTCCTGCGAGCTCAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | AAGGAAGGAAGGAAGGAAGAAAGAAAGTCTCAGTGCCTGTCATTTGGGGGTCATTCCCCACTGGGCATGTaGTCCAGGTCCACCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KEGRKEERKSQCLSFGGHSPLGM*SRSTQG Trigger: TCCCTGGGTGGACCTGGAGCACATGCCCAGTGGGGA...ATGACCCCCAAATGACAGGCACTGAGACTTTCTTTCTTCCTTCCTTCCTTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CCA 90 bp | AGCTTAATAGGACAGAGGGGAAGACCCAGCCAAGACCCAGCTCTAGCTCAGGGTTGGCCACGCATTTTATaGCTACCACTTCCCGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLIGQRGRPSQDPALAQGWPRIL*LPLPEY Trigger: ATACTCGGGAAGTGGTAGCCATAAAATGCGTGGCCA...ACCCTGAGCTAGAGCTGGGTCTTGGCTGGGTCTTCCCCTCTGTCCTATTAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CCA 90 bp | GCCAAGGCAGGGAAGGTCTGGGGTTCTCACATGTATTCCACCTTTACAAAGGGCTTAGCAGGGCCTGATTaGAGGAGGAGACAATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AKAGKVWGSHMYSTFTKGLAGPD*RRRQWL Trigger: AAGCCATTGTCTCCTCCTCCAATCAGGCCCTGCTAA...GCCCTTTGTAAAGGTGGAATACATGTGAGAACCCCAGACCTTCCCTGCCTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | GAGGCGGTTAAGGGCAGAATGATTGAAAATCACCAGTATTCTCTAACTTTAGAAAAGGGCCCTTGCCTGTaGCAGGCTCTCCCCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EAVKGRMIENHQYSLTLEKGPCL*QALPTG Trigger: CCCAGTGGGGAGAGCCTGGCACAGGCAAGGGCCCTT...TTCTAAAGTTAGAGAATACTGGTGATTTTCAATCATTCTGCCCTTAACCGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | TCATGCATGAAGGATTGTCTTAAAGAACTGAAAAGGATGGCAGCTCTGAGCTCGGGCTTTGAGCTCCTCTaGCCGGGACACATACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCMKDCLKELKRMAALSSGFELL*PGHILS Trigger: GGACAGTATGTGTCCCGGGCAGAGGAGCTCAAAGCC...CGAGCTCAGAGCTGCCATCCTTTTCAGTTCTTTAAGACAATCCTTCATGCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CCA 90 bp | TCATGCATGAAGGATTGTCTTAAAGAACTGAAAAGGATGGCAGCTCTGAGCTCGCCCGAGTATCCTTCTTaGCGTAGGCCTTGTACACCG | + |
|
Preference number: 4 (lower is better) Translates to: SCMKDCLKELKRMAALSSPEYPS*RRPCTP Trigger: CGGTGTACAAGGCCTACGCCAAGAAGGATACTCGGG...CGAGCTCAGAGCTGCCATCCTTTTCAGTTCTTTAAGACAATCCTTCATGCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR TCA 90 bp | TCATGCATGAAGGATTGTCTTAAAGAACTGAAAAGGATGGCAGCTCTGAGCTCGATTCAGCTCGAGCCATaGGGTTCTGAACCTCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCMKDCLKELKRMAALSSIQLEP*GSEPRC Trigger: ACACCGAGGTTCAGAACCTCATGGCTCGAGCTGAAT...CGAGCTCAGAGCTGCCATCCTTTTCAGTTCTTTAAGACAATCCTTCATGCATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | AACTTTAGAAATAACCCTTCACACACACACACACACACACACACACACACACACTGCACGATATGGGGGTaGCGAATGCCCTTGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: NFRNNPSHTHTHTHTHTHCTIWG*RMPLRI Trigger: GATCCTCAAGGGCATTCGGCACCCCCATATCGTGCA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAGGGTTATTTCTAAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | CAATCTTCCAGTAACTCCAGATACGTAAGTTCTTCTCCAGCTCATACAGGGTATGGCAAAGCCAAAGTCTaGCAGTTTCAGGTGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSSSNSRYVSSSPAHTGYGKAKV*QFQVGL Trigger: AAGCCCCACCTGAAACTGGCAGACTTTGGCTTTGCC...ATACCCTGTATGAGCTGGAGAAGAACTTACGTATCTGGAGTTACTGGAAGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | AAGGAGGCGGTTAAGGGCAGAATGATTGAAAATCACCAGTATTCTCTAACTTTAGGGCATCCTGCTCTTTaGCAGCTTCCTCCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KEAVKGRMIENHQYSLTLGHPAL*QLPPPW Trigger: CCAAGGAGGAGGAAGCTGGCAAAGAGCAGGATGCCC...TAAAGTTAGAGAATACTGGTGATTTTCAATCATTCTGCCCTTAACCGCCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CCA 90 bp | AAGGTCTGGGGTTCTCACATGTATTCCACCTTTACAAAGGGCATGACTTTCATGTTGTCATTGTCCCACTaGAAGTCTTTCAGCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: KVWGSHMYSTFTKGMTFMLSLSH*KSFSCT Trigger: CGTGCAGCTGAAAGACTTCCAGTGGGACAATGACAA...CATGAAAGTCATGCCCTTTGTAAAGGTGGAATACATGTGAGAACCCCAGACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| 3UTR CAA 72 bp | GAAAGAAAGTCTCAGTGCCTGTCATTTGGGGGTCATTaGTGGCAGAACAGCTCCTCTGCTCCTTATTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ERKSQCLSFGGH*WQNSSSAPYSK Trigger: TTTTGAATAAGGAGCAGAGGAGCTGTTCTGCCACAAATGACCCCCAAATGACAGGCACTGAGACTTTCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR TCA 90 bp | AAGGAGGCGGTTAAGGGCAGAATGATTGAAAATCACCAGTATTCTCTAACTTTAAGGATCCTGCGGGTATaGATGAAGCGAGACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KEAVKGRMIENHQYSLTLRILRV*MKRDRS Trigger: TGACCTGTCTCGCTTCATTCATACCCGCAGGATCCT...TAAAGTTAGAGAATACTGGTGATTTTCAATCATTCTGCCCTTAACCGCCTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | GCGGTTAAGGGCAGAATGATTGAAAATCACCAGTATTCTCTAACTTTAGAAATACGTTCATGCAGGAACTaGAGGGCACTAGCCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVKGRMIENHQYSLTLEIRSCRN*RALANC Trigger: GCAGTTGGCTAGTGCCCTGCAGTTCCTGCATGAACG...TATTTCTAAAGTTAGAGAATACTGGTGATTTTCAATCATTCTGCCCTTAACCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR GCA 90 bp | AACTTTAGAAATAACCCTTCACACACACACACACACACACACACACACACACACTCCCTTATCTTGATCTaGTCCTTCAGGTATTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NFRNNPSHTHTHTHTHTHSLILI*SFRYSA Trigger: AGCTGAATACCTGAAGGAGCAGATCAAGATAAGGGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAGGGTTATTTCTAAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR TCA 90 bp | AAGGAGGCGGTTAAGGGCAGAATGATTGAAAATCACCAGTATTCTCTAACTTTAGAGACTCCCTTATCTTaGTCTGCTCCTTCAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: KEAVKGRMIENHQYSLTLETPLS*SAPSGI Trigger: AATACCTGAAGGAGCAGATCAAGATAAGGGAGTCTC...TAAAGTTAGAGAATACTGGTGATTTTCAATCATTCTGCCCTTAACCGCCTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS TCA 90 bp | GGCATCCTGCTCTTTGCCAGCTTCCTCCTCCTTGGCCAGGGCAGCTaGGGCCACTTCCAGGGCAGCCAGGAGGCGTGGTTTGTCACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GILLFASFLLLGQGS*GHFQGSQEAWFVTG Trigger: GCCCGTGACAAACCACGCCTCCTGGCTGCCCTGGAAGTGGCCTCAGCTGCCCTGGCCAAGGAGGAGGAAGCTGGCAAAGAGCAGGATGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS CCA 90 bp | CAGCCTCCACCACAAGGGCCCTTGCCTGTGCCAGGCTCTCCCCACTaGGCATGTGCTCCAGGTCCACCCAGGGATGGGCAAAGAAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QPPPQGPLPVPGSPH*ACAPGPPRDGQRSP Trigger: AGGACTTCTTTGCCCATCCCTGGGTGGACCTGGAGCACATGCCCAGTGGGGAGAGCCTGGCACAGGCAAGGGCCCTTGTGGTGGAGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS GCA 90 bp | TCCTTGAAGGAGATTCGACGGGCGGGGTCCCGCTCTAGAAGTCGCTaGAACAGGTCCCGGCAGTCTAGGGAGAGTTGGGGCCGAAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLKEIRRAGSRSRSR*NRSRQSRESWGRRG Trigger: CCCTCTTCGGCCCCAACTCTCCCTAGACTGCCGGGACCTGTTGCAGCGACTTCTAGAGCGGGACCCCGCCCGTCGAATCTCCTTCAAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS GCA 90 bp | ACCACAAGGGCCCTTGCCTGTGCCAGGCTCTCCCCACTGGGCATGTaGTCCAGGTCCACCCAGGGATGGGCAAAGAAGTCCTTGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TTRALACARLSPLGM*SRSTQGWAKKSLKE Trigger: CTCCTTCAAGGACTTCTTTGCCCATCCCTGGGTGGACCTGGAGCACATGCCCAGTGGGGAGAGCCTGGCACAGGCAAGGGCCCTTGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CAA 90 bp | AGCTCTGAGCTCGCAGGAAGACTGGAGAGGTCTGAGAGCCGAGAGCATACTGTCCCACCACAAGGGCCCTaGCCTGTGCCAGGCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSELAGRLERSESREHTVPPQGP*PVPGSP Trigger: GGGAGAGCCTGGCACAGGCAAGGGCCCTTGTGGTGG...GACAGTATGCTCTCGGCTCTCAGACCTCTCCAGTCTTCCTGCGAGCTCAGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS TCA 90 bp | TGGGCATGTGCTCCAGGTCCACCCAGGGATGGGCAAAGAAGTCCTTaGAGGAGATTCGACGGGCGGGGTCCCGCTCTAGAAGTCGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WACAPGPPRDGQRSP*RRFDGRGPALEVAA Trigger: TGCAGCGACTTCTAGAGCGGGACCCCGCCCGTCGAATCTCCTTCAAGGACTTCTTTGCCCATCCCTGGGTGGACCTGGAGCACATGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CAA 90 bp | TGGGAACCAGCATGTGGGAGCTGCTCGTCCAGGAAGGTCCCAGGTGTGCAGGTGTCCACTGACGCCTTGTaGAGACTCTTCTTGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: WEPACGSCSSRKVPGVQVSTDAL*RLFLAT Trigger: CGTGGCCAAGAAGAGTCTCAACAAGGCGTCAGTGGA...CACCTGCACACCTGGGACCTTCCTGGACGAGCAGCTCCCACATGCTGGTTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS GCA 90 bp | CATCCACTTCGTAGTGTAGCGCAGGTACAAAGAAGTCCAGAGCCTTaGAGTAGAGCGACAGGGCAGCGGCAGCATCCCCCTCCTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HPLRSVAQVQRSPEP*SRATGQRQHPPPGP Trigger: AGGACCAGGAGGGGGATGCTGCCGCTGCCCTGTCGCTCTACTGCAAGGCTCTGGACTTCTTTGTACCTGCGCTACACTACGAAGTGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS TCA 90 bp | TCTCGAAGCAGCTCTTGGACAGTTGTGCCCTGTCTTAGCAGGGCCTaGTTGGAGGAGGAGACAATGGCTTTGAGCTCCTCTGCCCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SRSSSWTVVPCLSRA*LEEETMALSSSARD Trigger: GTCCCGGGCAGAGGAGCTCAAAGCCATTGTCTCCTCCTCCAATCAGGCCCTGCTAAGACAGGGCACAACTGTCCAAGAGCTGCTTCGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CAA 90 bp | GTGGAGAACACTCAGAGGAATGCTGGGAACCAGCATGTGGGAGCTGCTCGTCCAAGGGCATCCTGCTCTTaGCCAGCTTCCTCCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VENTQRNAGNQHVGAARPRASCS*PASSSL Trigger: CAAGGAGGAGGAAGCTGGCAAAGAGCAGGATGCCCT...TGGACGAGCAGCTCCCACATGCTGGTTCCCAGCATTCCTCTGAGTGTTCTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CAA 90 bp | TCATGCAGGAACTGCAGGGCACTAGCCAACTGCTGCATGAAAACACGGGCCACCTCCACTGACGCCTTGTaGAGACTCTTCTTGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SCRNCRALANCCMKTRATSTDAL*RLFLAT Trigger: CGTGGCCAAGAAGAGTCTCAACAAGGCGTCAGTGGA...GGTGGCCCGTGTTTTCATGCAGCAGTTGGCTAGTGCCCTGCAGTTCCTGCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215748.2 |
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| CDS-3UTR CAA 90 bp | AAGGGTGGAGAACACTCAGAGGAATGCTGGGAACCAGCATGTGGGAGCTGCTCGGGGTGCCGAATGCCCTaGAGGATCTCAATCTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KGGEHSEECWEPACGSCSGCRMP*RISISV Trigger: GACTGAGATTGAGATCCTCAAGGGCATTCGGCACCC...CGAGCAGCTCCCACATGCTGGTTCCCAGCATTCCTCTGAGTGTTCTCCACCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS GCA 90 bp | GTGGTTTGTCACGGGCCATCTCTCGAAGCAGCTCTTGGACAGTTGTaGCCTGTCTTAGCAGGGCCTGATTGGAGGAGGAGACAATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VVCHGPSLEAALGQL*PVLAGPDWRRRQWL Trigger: AAGCCATTGTCTCCTCCTCCAATCAGGCCCTGCTAAGACAGGGCACAACTGTCCAAGAGCTGCTTCGAGAGATGGCCCGTGACAAACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CAA 90 bp | ATGCAGGAACTGCAGGGCACTAGCCAACTGCTGCATGAAAACACGGGCCACCTTGGGTGCCGAATGCCCTaGAGGATCTCAATCTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: MQELQGTSQLLHENTGHLGCRMP*RISISV Trigger: GACTGAGATTGAGATCCTCAAGGGCATTCGGCACCC...AAGGTGGCCCGTGTTTTCATGCAGCAGTTGGCTAGTGCCCTGCAGTTCCTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215748.2 |
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| CDS TCA 90 bp | CCTGGAAGTCTTTCAGCTGCACGATATGGGGGTGCCGAATGCCCTTaGGGATCTCAATCTCAGTCAGGAGGTTTTCCACTGACGCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PGSLSAARYGGAECP*GSQSQSGGFPLTPC Trigger: ACAAGGCGTCAGTGGAAAACCTCCTGACTGAGATTGAGATCCTCAAGGGCATTCGGCACCCCCATATCGTGCAGCTGAAAGACTTCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215748.2 |
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| CDS GCA 90 bp | CTAGGGAGAGTTGGGGCCGAAGAGGGAGCTCAATCACCCGATTGCTaGGAATCTTTTCTTCTAGCTCTGAGAACGATCTGGAGGCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGRVGAEEGAQSPDC*ESFLLALRTIWRQR Trigger: CCTTTGCCTCCAGATCGTTCTCAGAGCTAGAAGAAAAGATTCGCAGCAATCGGGTGATTGAGCTCCCTCTTCGGCCCCAACTCTCCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CAA 90 bp | AAGGAAGGAAGGAAGGAAGAAAGAAAGTCTCAGTGCCTGTCATTTGGGGGTCATGCCAGGAGGCGTGGTTaGTCACGGGCCATCTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: KEGRKEERKSQCLSFGGHARRRG*SRAISR Trigger: TCGAGAGATGGCCCGTGACAAACCACGCCTCCTGGC...ATGACCCCCAAATGACAGGCACTGAGACTTTCTTTCTTCCTTCCTTCCTTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS TCA 90 bp | ACTGGAAGTCTTTCAGCTGCACGATATGGGGGTGCCGAATGCCCTTaGGGATCTCAATCTCAGTCAGGAGGTTTTCCACTGACGCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TGSLSAARYGGAECP*GSQSQSGGFPLTPC Trigger: ACAAGGCGTCAGTGGAAAACCTCCTGACTGAGATTGAGATCCTCAAGGGCATTCGGCACCCCCATATCGTGCAGCTGAAAGACTTCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS GCA 90 bp | AGGCAGGATCCTGCGGGTATGAATGAAGCGAGACAGGTCACCCCCTaGACAGAACTCCATGATGAGGTAGATATTGTCATTGTCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: RQDPAGMNEARQVTP*TELHDEVDIVIVPL Trigger: CAGTGGGACAATGACAATATCTACCTCATCATGGAGTTCTGTGCAGGGGGTGACCTGTCTCGCTTCATTCATACCCGCAGGATCCTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS GCA 90 bp | AGTCTAGGGAGAGTTGGGGCCGAAGAGGGAGCTCAATCACCCGATTaGTGCGAATCTTTTCTTCTAGCTCTGAGAACGATCTGGAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SLGRVGAEEGAQSPD*CESFLLALRTIWRQ Trigger: TTGCCTCCAGATCGTTCTCAGAGCTAGAAGAAAAGATTCGCAGCAATCGGGTGATTGAGCTCCCTCTTCGGCCCCAACTCTCCCTAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CAA 90 bp | AAGGGTGGAGAACACTCAGAGGAATGCTGGGAACCAGCATGTGGGAGCTGCTCGAGCTCAATCACCCGATaGCTGCGAATCTTTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KGGEHSEECWEPACGSCSSSITR*LRIFSS Trigger: AGAAGAAAAGATTCGCAGCAATCGGGTGATTGAGCT...CGAGCAGCTCCCACATGCTGGTTCCCAGCATTCCTCTGAGTGTTCTCCACCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS GCA 90 bp | TTGTCATTGTCCCACTGGAAGTCTTTCAGCTGCACGATATGGGGGTaGCGAATGCCCTTGAGGATCTCAATCTCAGTCAGGAGGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSLSHWKSFSCTIWG*RMPLRISISVRRFS Trigger: GGAAAACCTCCTGACTGAGATTGAGATCCTCAAGGGCATTCGGCACCCCCATATCGTGCAGCTGAAAGACTTCCAGTGGGACAATGACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS-3UTR CAA 90 bp | AAGGAGGCGGTTAAGGGCAGAATGATTGAAAATCACCAGTATTCTCTAACTTTACCAGCTTCCTCCTCCTaGGCCAGGGCAGCTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KEAVKGRMIENHQYSLTLPASSS*ARAAEA Trigger: GGCCTCAGCTGCCCTGGCCAAGGAGGAGGAAGCTGG...TAAAGTTAGAGAATACTGGTGATTTTCAATCATTCTGCCCTTAACCGCCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
||
| CDS-3UTR CAA 90 bp | GCCAAGGCAGGGAAGGTCTGGGGTTCTCACATGTATTCCACCTTTACAAAGGGCTTGTTGAGACTCTTCTaGGCCACGCATTTTATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AKAGKVWGSHMYSTFTKGLLRLF*ATHFMA Trigger: AGCCATAAAATGCGTGGCCAAGAAGAGTCTCAACAA...GCCCTTTGTAAAGGTGGAATACATGTGAGAACCCCAGACCTTCCCTGCCTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
||
| CDS GCA 72 bp | GAGATTCGACGGGCGGGGTCCCGCTCTAGAAGTCGCTaGAACAGGTCCCGGCAGTCTAGGGAGAGTTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: EIRRAGSRSRSR*NRSRQSRESWG Trigger: GCCCCAACTCTCCCTAGACTGCCGGGACCTGTTGCAGCGACTTCTAGAGCGGGACCCCGCCCGTCGAATCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS CAA 90 bp | GCCAGGGCAGCTGAGGCCACTTCCAGGGCAGCCAGGAGGCGTGGTTaGTCACGGGCCATCTCTCGAAGCAGCTCTTGGACAGTTGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: ARAAEATSRAARRRG*SRAISRSSSWTVVP Trigger: GGGCACAACTGTCCAAGAGCTGCTTCGAGAGATGGCCCGTGACAAACCACGCCTCCTGGCTGCCCTGGAAGTGGCCTCAGCTGCCCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS CAA 90 bp | CTGGGCATGTGCTCCAGGTCCACCCAGGGATGGGCAAAGAAGTCCTaGAAGGAGATTCGACGGGCGGGGTCCCGCTCTAGAAGTCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LGMCSRSTQGWAKKS*KEIRRAGSRSRSRC Trigger: GCAGCGACTTCTAGAGCGGGACCCCGCCCGTCGAATCTCCTTCAAGGACTTCTTTGCCCATCCCTGGGTGGACCTGGAGCACATGCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS CAA 72 bp | GCTGAGGCCACTTCCAGGGCAGCCAGGAGGCGTGGTTaGTCACGGGCCATCTCTCGAAGCAGCTCTTGGACA | + |
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Preference number: 6 (lower is better) Translates to: AEATSRAARRRG*SRAISRSSSWT Trigger: TGTCCAAGAGCTGCTTCGAGAGATGGCCCGTGACAAACCACGCCTCCTGGCTGCCCTGGAAGTGGCCTCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS TCA 72 bp | GCTCCAGGTCCACCCAGGGATGGGCAAAGAAGTCCTTaGAGGAGATTCGACGGGCGGGGTCCCGCTCTAGAA | + |
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Preference number: 6 (lower is better) Translates to: APGPPRDGQRSP*RRFDGRGPALE Trigger: TTCTAGAGCGGGACCCCGCCCGTCGAATCTCCTTCAAGGACTTCTTTGCCCATCCCTGGGTGGACCTGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS CAA 72 bp | TGCTCCAGGTCCACCCAGGGATGGGCAAAGAAGTCCTaGAAGGAGATTCGACGGGCGGGGTCCCGCTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: CSRSTQGWAKKS*KEIRRAGSRSR Trigger: TCTAGAGCGGGACCCCGCCCGTCGAATCTCCTTCAAGGACTTCTTTGCCCATCCCTGGGTGGACCTGGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS TCA 72 bp | GGGCCACCTTCTCAGGCAGGATCCTGCGGGTATGAATaGAGCGAGACAGGTCACCCCCTGCACAGAACTCCA | + |
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Preference number: 6 (lower is better) Translates to: GPPSQAGSCGYE*SETGHPLHRTP Trigger: TGGAGTTCTGTGCAGGGGGTGACCTGTCTCGCTTCATTCATACCCGCAGGATCCTGCCTGAGAAGGTGGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS GCA 72 bp | CGTAGTGTAGCGCAGGTACAAAGAAGTCCAGAGCCTTaGAGTAGAGCGACAGGGCAGCGGCAGCATCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: RSVAQVQRSPEP*SRATGQRQHPP Trigger: AGGGGGATGCTGCCGCTGCCCTGTCGCTCTACTGCAAGGCTCTGGACTTCTTTGTACCTGCGCTACACTACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS CAA 90 bp | GGCGTGGTTTGTCACGGGCCATCTCTCGAAGCAGCTCTTGGACAGTaGTGCCCTGTCTTAGCAGGGCCTGATTGGAGGAGGAGACAATGG | + |
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Preference number: 6 (lower is better) Translates to: GVVCHGPSLEAALGQ*CPVLAGPDWRRRQW Trigger: CCATTGTCTCCTCCTCCAATCAGGCCCTGCTAAGACAGGGCACAACTGTCCAAGAGCTGCTTCGAGAGATGGCCCGTGACAAACCACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS GCA 72 bp | CACGGGCCATCTCTCGAAGCAGCTCTTGGACAGTTGTaGCCTGTCTTAGCAGGGCCTGATTGGAGGAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: HGPSLEAALGQL*PVLAGPDWRRR Trigger: TCTCCTCCTCCAATCAGGCCCTGCTAAGACAGGGCACAACTGTCCAAGAGCTGCTTCGAGAGATGGCCCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS CAA 72 bp | TGTCACGGGCCATCTCTCGAAGCAGCTCTTGGACAGTaGTGCCCTGTCTTAGCAGGGCCTGATTGGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: CHGPSLEAALGQ*CPVLAGPDWRR Trigger: CCTCCTCCAATCAGGCCCTGCTAAGACAGGGCACAACTGTCCAAGAGCTGCTTCGAGAGATGGCCCGTGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS GCA 72 bp | TCCCACTGGAAGTCTTTCAGCTGCACGATATGGGGGTaGCGAATGCCCTTGAGGATCTCAATCTCAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SHWKSFSCTIWG*RMPLRISISVR Trigger: CCTGACTGAGATTGAGATCCTCAAGGGCATTCGGCACCCCCATATCGTGCAGCTGAAAGACTTCCAGTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS GCA 72 bp | CTGATTGGAGGAGGAGACAATGGCTTTGAGCTCCTCTaGCCGGGACACATACTGTCCCACCTTCGCCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: LIGGGDNGFELL*PGHILSHLRLN Trigger: ATTAAGGCGAAGGTGGGACAGTATGTGTCCCGGGCAGAGGAGCTCAAAGCCATTGTCTCCTCCTCCAATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS GCA 72 bp | GGATCCTGGAAGTCTTTCAGCTGCACGATATGGGGGTaGCGAATGCCCTTGAGGATCTCAATCTCAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GSWKSFSCTIWG*RMPLRISISVR Trigger: CCTGACTGAGATTGAGATCCTCAAGGGCATTCGGCACCCCCATATCGTGCAGCTGAAAGACTTCCAGGATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215748.2 |
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| CDS CCA 72 bp | CAGGCAGGATCCTGGAAGTCTTTCAGCTGCACGATATaGGGGTGCCGAATGCCCTTGAGGATCTCAATCTCA | + |
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Preference number: 6 (lower is better) Translates to: QAGSWKSFSCTI*GCRMPLRISIS Trigger: TGAGATTGAGATCCTCAAGGGCATTCGGCACCCCCATATCGTGCAGCTGAAAGACTTCCAGGATCCTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215748.2 |
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| CDS CAA 90 bp | CACTGGAAGTCTTTCAGCTGCACGATATGGGGGTGCCGAATGCCCTaGAGGATCTCAATCTCAGTCAGGAGGTTTTCCACTGACGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: HWKSFSCTIWGCRMP*RISISVRRFSTDAL Trigger: CAAGGCGTCAGTGGAAAACCTCCTGACTGAGATTGAGATCCTCAAGGGCATTCGGCACCCCCATATCGTGCAGCTGAAAGACTTCCAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS CAA 90 bp | CAGTCTAGGGAGAGTTGGGGCCGAAGAGGGAGCTCAATCACCCGATaGCTGCGAATCTTTTCTTCTAGCTCTGAGAACGATCTGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: QSRESWGRRGSSITR*LRIFSSSSENDLEA Trigger: TGCCTCCAGATCGTTCTCAGAGCTAGAAGAAAAGATTCGCAGCAATCGGGTGATTGAGCTCCCTCTTCGGCCCCAACTCTCCCTAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS CAA 90 bp | TCCTGGAAGTCTTTCAGCTGCACGATATGGGGGTGCCGAATGCCCTaGAGGATCTCAATCTCAGTCAGGAGGTTTTCCACTGACGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SWKSFSCTIWGCRMP*RISISVRRFSTDAL Trigger: CAAGGCGTCAGTGGAAAACCTCCTGACTGAGATTGAGATCCTCAAGGGCATTCGGCACCCCCATATCGTGCAGCTGAAAGACTTCCAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215748.2 |
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| CDS TCA 72 bp | GACAGCCCCTCTTTGTCCAGACTCTCCGCTTCCCAGTaGGACTCCCTTATCTTGATCTGCTCCTTCAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: DSPSLSRLSASQ*DSLILICSFRY Trigger: ATACCTGAAGGAGCAGATCAAGATAAGGGAGTCTCACTGGGAAGCGGAGAGTCTGGACAAAGAGGGGCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS CCA 72 bp | TCATTGTCCCACTGGAAGTCTTTCAGCTGCACGATATaGGGGTGCCGAATGCCCTTGAGGATCTCAATCTCA | + |
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Preference number: 6 (lower is better) Translates to: SLSHWKSFSCTI*GCRMPLRISIS Trigger: TGAGATTGAGATCCTCAAGGGCATTCGGCACCCCCATATCGTGCAGCTGAAAGACTTCCAGTGGGACAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS CAA 90 bp | CCCTTGAGGATCTCAATCTCAGTCAGGAGGTTTTCCACTGACGCCTaGTTGAGACTCTTCTTGGCCACGCATTTTATGGCTACCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: PLRISISVRRFSTDA*LRLFLATHFMATTS Trigger: GGAAGTGGTAGCCATAAAATGCGTGGCCAAGAAGAGTCTCAACAAGGCGTCAGTGGAAAACCTCCTGACTGAGATTGAGATCCTCAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS CAA 72 bp | AGGAGGTTTTCCACTGACGCCTTGTTGAGACTCTTCTaGGCCACGCATTTTATGGCTACCACTTCCCGAGTA | + |
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Preference number: 6 (lower is better) Translates to: RRFSTDALLRLF*ATHFMATTSRV Trigger: TACTCGGGAAGTGGTAGCCATAAAATGCGTGGCCAAGAAGAGTCTCAACAAGGCGTCAGTGGAAAACCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS CAA 90 bp | ATCTCAGTCAGGAGGTTTTCCACTGACGCCTTGTTGAGACTCTTCTaGGCCACGCATTTTATGGCTACCACTTCCCGAGTATCCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ISVRRFSTDALLRLF*ATHFMATTSRVSFL Trigger: CAAGAAGGATACTCGGGAAGTGGTAGCCATAAAATGCGTGGCCAAGAAGAGTCTCAACAAGGCGTCAGTGGAAAACCTCCTGACTGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS CAA 90 bp | TTGAGGATCTCAATCTCAGTCAGGAGGTTTTCCACTGACGCCTTGTaGAGACTCTTCTTGGCCACGCATTTTATGGCTACCACTTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: LRISISVRRFSTDAL*RLFLATHFMATTSR Trigger: TCGGGAAGTGGTAGCCATAAAATGCGTGGCCAAGAAGAGTCTCAACAAGGCGTCAGTGGAAAACCTCCTGACTGAGATTGAGATCCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS TCA 72 bp | CAATCTCAGTCAGGAGGTTTTCCACTGACGCCTTGTTaGGACTCTTCTTGGCCACGCATTTTATGGCTACCA | + |
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Preference number: 6 (lower is better) Translates to: QSQSGGFPLTPC*DSSWPRILWLP Trigger: TGGTAGCCATAAAATGCGTGGCCAAGAAGAGTCTCAACAAGGCGTCAGTGGAAAACCTCCTGACTGAGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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| CDS CAA 72 bp | TCAATCTCAGTCAGGAGGTTTTCCACTGACGCCTTGTaGAGACTCTTCTTGGCCACGCATTTTATGGCTACC | + |
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Preference number: 6 (lower is better) Translates to: SISVRRFSTDAL*RLFLATHFMAT Trigger: GGTAGCCATAAAATGCGTGGCCAAGAAGAGTCTCAACAAGGCGTCAGTGGAAAACCTCCTGACTGAGATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053230.7 |
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