RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ULK2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000004798

Ensembl transcript IDs: ENSMUST00000004920.4

Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGCTGCTTGTTCTTTGGTAGTCACCACACTGTCCTGGGATGGGTaGCAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCA +
Preference number: 1 (lower is better)
Translates to: AAACSLVVTTLSWDG*QNQDVIPNVSPPVP
Trigger: TGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCATCCCAGGACAGTGTGGTGACTACCAAAGAACAAGCAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR CCA 90 bp TTGTCTGTAGGAGCCTGCATGACAGCTTCCAAGAGTTTTGAATCCTaGAGCAGGGCAAAGAATATTGATGGCCAAGTTTCCAACCCACTC +
Preference number: 1 (lower is better)
Translates to: LSVGACMTASKSFES*SRAKNIDGQVSNPL
Trigger: GAGTGGGTTGGAAACTTGGCCATCAATATTCTTTGCCCTGCTCCAGGATTCAAAACTCTTGGAAGCTGTCATGCAGGCTCCTACAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR CCA 90 bp TTAAGCTGCTGCTTGTTCTTTGGTAGTCACCACACTGTCCTGGGATaGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGT +
Preference number: 1 (lower is better)
Translates to: LSCCLFFGSHHTVLG*VTEPRCNPKCITSC
Trigger: ACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCATCCCAGGACAGTGTGGTGACTACCAAAGAACAAGCAGCAGCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR GCA 90 bp CTACAATATGTAGTAGTTTTGTATTGTTCTTCCTTCTTAAGCTGCTaGTTGTTCTTTGGTAGTCACCACACTGTCCTGGGATGGGTGACA +
Preference number: 1 (lower is better)
Translates to: LQYVVVLYCSSFLSC*LFFGSHHTVLGWVT
Trigger: TGTCACCCATCCCAGGACAGTGTGGTGACTACCAAAGAACAAGCAGCAGCTTAAGAAGGAAGAACAATACAAAACTACTACATATTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR GCA 90 bp TTTCTACAATATGTAGTAGTTTTGTATTGTTCTTCCTTCTTAAGCTaGTGCTTGTTCTTTGGTAGTCACCACACTGTCCTGGGATGGGTG +
Preference number: 1 (lower is better)
Translates to: FLQYVVVLYCSSFLS*CLFFGSHHTVLGWV
Trigger: CACCCATCCCAGGACAGTGTGGTGACTACCAAAGAACAAGCAGCAGCTTAAGAAGGAAGAACAATACAAAACTACTACATATTGTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR-3UTR GCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAATCACCTCCTGTTCCATaGCAGTCCACAGACAAGCCT +
Preference number: 2 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQSPPVP*QSTDKP
Trigger: AGGCTTGTCTGTGGACTGGCATGGAACAGGAGGTGA...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR-3UTR TCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCTGTCCTGGGATGGGTaGCAGAACCAAGATGTAATC +
Preference number: 2 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLLSWDG*QNQDVI
Trigger: GATTACATCTTGGTTCTGTCACCCATCCCAGGACAG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR CAA 90 bp CAATATGTAGTAGTTTTGTATTGTTCTTCCTTCTTAAGCTGCTGCTaGTTCTTTGGTAGTCACCACACTGTCCTGGGATGGGTGACAGAA +
Preference number: 2 (lower is better)
Translates to: QYVVVLYCSSFLSCC*FFGSHHTVLGWVTE
Trigger: TTCTGTCACCCATCCCAGGACAGTGTGGTGACTACCAAAGAACAAGCAGCAGCTTAAGAAGGAAGAACAATACAAAACTACTACATATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR-3UTR TCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGTATTGCTCAGAGAGCTaGATGAAGCCACTCACTTTG +
Preference number: 2 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLYCSES*MKPLTL
Trigger: CAAAGTGAGTGGCTTCATTCAGCTCTCTGAGCAATA...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR-3UTR CCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAAAGTACACATTAGTCTaGAGAGAGCTGCCCATTTCC +
Preference number: 2 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVKYTLV*RELPIS
Trigger: GGAAATGGGCAGCTCTCTCCAGACTAATGTGTACTT...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR-3UTR TCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTATTTGTTCTGCTTCTATaGAGAGAAAGGAAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVFVLLL*RERKGG
Trigger: TCCCCCTTTCCTTTCTCTTCATAGAAGCAGAACAAA...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR-3UTR GCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTATCCTTCTTAAGCTGCTaGTTGTTCTTTGGTAGTCAC +
Preference number: 2 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVSFLSC*LFFGSH
Trigger: GTGACTACCAAAGAACAAGCAGCAGCTTAAGAAGGA...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR-3UTR GCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTATCTTCCTTCTTAAGCTaGTGCTTGTTCTTTGGTAGT +
Preference number: 2 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVSSFLS*CLFFGS
Trigger: ACTACCAAAGAACAAGCAGCAGCTTAAGAAGGAAGA...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR-3UTR TCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAAGTGGAGATTACACATaGATTCTGAAAAGGACATGT +
Preference number: 2 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVSGDYT*ILKRTC
Trigger: ACATGTCCTTTTCAGAATTCATGTGTAATCTCCACT...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR-3UTR GCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGGCTTTTGCTTGTGTATaGTTTAGCAAAACACGGAAT +
Preference number: 2 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLAFACV*FSKTRN
Trigger: ATTCCGTGTTTTGCTAAAGCATACACAAGCAAAAGC...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR CCA 72 bp GGAGCCTGCATGACAGCTTCCAAGAGTTTTGAATCCTaGAGCAGGGCAAAGAATATTGATGGCCAAGTTTCC +
Preference number: 3 (lower is better)
Translates to: GACMTASKSFES*SRAKNIDGQVS
Trigger: GGAAACTTGGCCATCAATATTCTTTGCCCTGCTCCAGGATTCAAAACTCTTGGAAGCTGTCATGCAGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR TCA 72 bp TGTTCTTTGGTAGTCACCACACTGTCCTGGGATGGGTaGCAGAACCAAGATGTAATCCCAAATGTATCACCT +
Preference number: 3 (lower is better)
Translates to: CSLVVTTLSWDG*QNQDVIPNVSP
Trigger: AGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCATCCCAGGACAGTGTGGTGACTACCAAAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR CCA 72 bp TGCTTGTTCTTTGGTAGTCACCACACTGTCCTGGGATaGGTGACAGAACCAAGATGTAATCCCAAATGTATC +
Preference number: 3 (lower is better)
Translates to: CLFFGSHHTVLG*VTEPRCNPKCI
Trigger: GATACATTTGGGATTACATCTTGGTTCTGTCACCCATCCCAGGACAGTGTGGTGACTACCAAAGAACAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGGCTGCTGCTTGTTCTTaGGTAGTCACCACACTGTCC +
Preference number: 3 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLAAACS*VVTTLS
Trigger: GGACAGTGTGGTGACTACCAAAGAACAAGCAGCAGC...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR TCA 72 bp CACCACCTACAAGACCTTTGTCATACAAGAAGAGCTTaGGAGTCACAGTGCAGTTTCAACACTTGCCTACTT +
Preference number: 3 (lower is better)
Translates to: HHLQDLCHTRRA*ESQCSFNTCLL
Trigger: AAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAGCTCTTCTTGTATGACAAAGGTCTTGTAGGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR GCA 72 bp TCGTCTGGACGAGCTGTATACGCTTTTGCTTGTGTATaGTTTAGCAAAACACGGAATTTCATGTATTGCTCA +
Preference number: 3 (lower is better)
Translates to: SSGRAVYAFACV*FSKTRNFMYCS
Trigger: TGAGCAATACATGAAATTCCGTGTTTTGCTAAAGCATACACAAGCAAAAGCGTATACAGCTCGTCCAGACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGTTCTTAAGCTGCTGCTaGTTCTTTGGTAGTCACCAC +
Preference number: 3 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLFLSCC*FFGSHH
Trigger: GTGGTGACTACCAAAGAACAAGCAGCAGCTTAAGAA...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR TCA 72 bp GGAGGCCAACTACATCTAGTTACTTGGAAAATCAACTaGGATAAACGGGGTAATTGGGAGAACATGAAAGAA +
Preference number: 3 (lower is better)
Translates to: GGQLHLVTWKIN*DKRGNWENMKE
Trigger: TTCTTTCATGTTCTCCCAATTACCCCGTTTATCTCAGTTGATTTTCCAAGTAACTAGATGTAGTTGGCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR GCA 72 bp TATGTAGTAGTTTTGTATTGTTCTTCCTTCTTAAGCTaGTGCTTGTTCTTTGGTAGTCACCACACTGTCCTG +
Preference number: 3 (lower is better)
Translates to: YVVVLYCSSFLS*CLFFGSHHTVL
Trigger: CAGGACAGTGTGGTGACTACCAAAGAACAAGCAGCAGCTTAAGAAGGAAGAACAATACAAAACTACTACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCAGCTGGGAGCTCCCTCTaGTCCTGGTGGGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPAGSSL*SWWGRA
Trigger: GGCTCTTCCCCACCAGGAGCAGAGGGAGCTCCCAGC...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAAAGGACCCCGTGTGCTTaGTGGGAGAGGTCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQRTPCA*WERSQG
Trigger: GCCTTGGGACCTCTCCCACCAAGCACACGGGGTCCT...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAACTGGCTTCATGGCCCTaGGGATGTCCACAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQLASWP*GCPQQH
Trigger: GTGCTGCTGTGGACATCCTCAGGGCCATGAAGCCAG...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCATCAGTTTTCTGGCGGTaGCGCCCCCGGAAGACCACA +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPSVFWR*RPRKTT
Trigger: TGTGGTCTTCCGGGGGCGGCACCGCCAGAAAACTGA...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAATCCCAATCAGTTTTCTaGCGGTGCCGCCCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQSQSVF*RCRPRK
Trigger: CTTCCGGGGGCGGCACCGCCAGAAAACTGATTGGGA...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCAGGCTGTGGCACTGTGTaGAGGAGACCCCACGGTGAA +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPGCGTV*RRPHGE
Trigger: TTCACCGTGGGGTCTCCTCCACACAGTGCCACAGCC...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAAAGCTCTGGCGCTTGCTaGTGTTCCTGCTGGCAATGC +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQSSGAC*CSCWQC
Trigger: GCATTGCCAGCAGGAACAGCAGCAAGCGCCAGAGCT...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCACTCGCTTCCTTGTACTaGGAGGCAGTGGGAACACTC +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPLASLY*EAVGTL
Trigger: GAGTGTTCCCACTGCCTCTCAGTACAAGGAAGCGAG...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAAAAGATGGTGAGCTGCTaGAGGAGCTTCCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQKMVSC*RSFQGQ
Trigger: CTGTCCCTGGAAGCTCCTGCAGCAGCTCACCATCTT...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCAAGGGTGGGTGCACTCTaGAGTCTAGCACCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPRVGAL*SLAPSK
Trigger: CTTACTGGGTGCTAGACTGCAGAGTGCACCCACCCT...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCAAGGACACAGCAGATGTaGACAGCTCAGGGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPRTQQM*TAQGSH
Trigger: GTGGGAACCCTGAGCTGTGCACATCTGCTGTGTCCT...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCAGGGAGCCATGTACATTaGGGATCCACACAGTGTCGC +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPGSHVH*GSTQCR
Trigger: GCGACACTGTGTGGATCCCCAATGTACATGGCTCCC...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCAAGGAGTGCCTACTCCTaGCTTCATGGCCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPRSAYS*LHGPED
Trigger: ATCCTCAGGGCCATGAAGCCAGGAGTAGGCACTCCT...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAAAGTGACTGTGGTGCCTaGGTCTGTGGCACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQSDCGA*VCGTGE
Trigger: TTCTCCAGTGCCACAGACCCAGGCACCACAGTCACT...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAACCAGTCAGAATTCCGTaGAGAGGACCCCGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQPVRIP*RGPRVL
Trigger: AAGCACACGGGGTCCTCTCCACGGAATTCTGACTGG...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAACTTTCAGCAGGCCCATaGCGAGTAACCAAGGCTAAC +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQLSAGP*RVTKAN
Trigger: GTTAGCCTTGGTTACTCGTCATGGGCCTGCTGAAAG...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAAGTTCGAAGGACCATATaGGTACAAGTGGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQVRRTI*VQVGAV
Trigger: CACAGCCCCCACTTGTACTCATATGGTCCTTCGAAC...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAATCAGCTTCCCAGACTTaGCCTGAGCTTTGGCGAGAT +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQSASQT*PELWRD
Trigger: ATCTCGCCAAAGCTCAGGTCAAGTCTGGGAAGCTGA...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAACACACAGGGTCAGAGTaGTGCTTTCTGAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQHTGSE*CFLSFC
Trigger: GCAGAAGCTCAGAAAGCAGCACTCTGACCCTGTGTG...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAGGAGAGGACCCCGTGTaGTTGGTGGGAGAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVGEDPV*LVGEVP
Trigger: TGGGACCTCTCCCACCAAGCACACGGGGTCCTCTCC...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCATGTTCCTGCTGGCAATaGCAGCATAACACCACAGGC +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPCSCWQ*QHNTTG
Trigger: GCCTGTGGTGTTATGCTGGCATTGCCAGCAGGAACA...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAATGTGCAGGATTCGCATaGCTGCCGCAATCTGATGGA +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQCAGFA*LPQSDG
Trigger: TCCATCAGATTGCGGCAGCCATGCGAATCCTGCACA...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGACCCCGTGTGCTTGGTaGGAGAGGTCCCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLTPCAW*ERSQGC
Trigger: GCAGCCTTGGGACCTCTCCCACCAAGCACACGGGGT...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAATGTTTCGCTGTGAGGTaGCACAGTAGGTTGACACTG +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQCFAVR*HSRLTL
Trigger: CAGTGTCAACCTACTGTGTCACCTCACAGCGAAACA...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCCACGAGGTCCCGCTTaGAGTACTCGAAGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLPRGPA*STRSRP
Trigger: TGGGCGACTTCGAGTACTGCAAGCGGGACCTCGTGG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAGTTCCCACCCCTCACTaGCGTCAGGTCCAGCACACA +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVVPTPH*RQVQHT
Trigger: TGTGTGCTGGACCTGACGGCAGTGAGGGGTGGGAAC...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCAAGTAGGAACTGGAATTaGGGCTGTTTCGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPSRNWN*GCFAVR
Trigger: CCTCACAGCGAAACAGCCCCAATTCCAGTTCCTACT...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCACTTAGCTGGCTGATCTaGTCCACAACTACACTCTCC +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPLSWLI*STTTLS
Trigger: GGAGAGTGTAGTTGTGGACCAGATCAGCCAGCTAAG...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAATTTCACAGCCATGGATaGGCTCAGCTTCCCAGACTT +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQFHSHG*AQLPRL
Trigger: AAGTCTGGGAAGCTGAGCCCATCCATGGCTGTGAAA...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAAATGGCTGCCGCAATCTaGTGGAGAAACACTCTGATA +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQMAAAI*WRNTLI
Trigger: TATCAGAGTGTTTCTCCATCAGATTGCGGCAGCCAT...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAATGTGGATTATCCCTTTaGTGTGCAGGATTCGCATGG +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQCGLSL*CAGFAW
Trigger: CCATGCGAATCCTGCACAGCAAAGGGATAATCCACA...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCATTAAACTATCCGTGCTaGCCTGGTGTCCACCTAAAG +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPLNYPC*PGVHLK
Trigger: CTTTAGGTGGACACCAGGGCAGCACGGATAGTTTAA...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCAATCTGGAAGGGATGGTaGAGAAGCAAAGCGACAAGA +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPIWKGW*RSKATR
Trigger: TCTTGTCGCTTTGCTTCTCCACCATCCCTTCCAGAT...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAGCACGTATCTTAGGCTaGGAGCTCCCTCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVARILG*ELPLLL
Trigger: CAGGAGCAGAGGGAGCTCCCAGCCTAAGATACGTGC...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGAAAGCGACAAGATGGTaGGCTGCTGCAGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLKATRW*AAAGAS
Trigger: GGAAGCTCCTGCAGCAGCTCACCATCTTGTCGCTTT...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGAACCAAAGGGGATGGTaGGTAAGGCCTGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLNQRGW*VRPGRA
Trigger: GGCTCTTCCAGGCCTTACTCACCATCCCCTTTGGTT...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAAAGCTTGCAAATAATCTaGCAGGTCTCCACCATTGCA +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQSLQII*QVSTIA
Trigger: TGCAATGGTGGAGACCTGGCAGATTATTTGCAAGCT...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAGGAGAACCTGAGGAGTaGCTACTCCTGGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVGEPEE*LLLASW
Trigger: CCATGAAGCCAGGAGTAGGCACTCCTCAGGTTCTCC...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAACTGCCTTGCTCTGCTaGTGCTCAGATCGATGCCTC +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVTALLC*CSDRCL
Trigger: GAGGCATCGATCTGAGCAGCAGCAGAGCAAGGCAGT...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAATGTACAACACCAGCTaGTCCACCCGCCCCCAATCT +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVMYNTS*STRPQS
Trigger: AGATTGGGGGCGGGTGGAGCAGCTGGTGTTGTACAT...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCGCCAGCAGCTGTGCTaGCTTCATGTACAACACCAG +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLRQQLC*LHVQHQ
Trigger: CTGGTGTTGTACATGAAGGCAGCACAGCTGCTGGCG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAAGCCGCCAGCAGCTGTaGTGCCTTCATGTACAACAC +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVSRQQL*CLHVQH
Trigger: GTGTTGTACATGAAGGCAGCACAGCTGCTGGCGGCT...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAAAATATGCTGCATATCTaGAAGGGATGGTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQNMLHI*KGWWRS
Trigger: GCTTCTCCACCATCCCTTCCAGATATGCAGCATATT...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGACACCTGTAGATAGTTaGGAGGACCCAACGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLTPVDS*EDPTVG
Trigger: CCCCACCGTTGGGTCCTCCCAACTATCTACAGGTGT...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCAGGCATGTCATATGAGTaGTCTGACGAGATGTTGTGT +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPGMSYE*SDEMLC
Trigger: ACACAACATCTCGTCAGACCACTCATATGACATGCC...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCATACTTGAGTAGGAACTaGAATTGGGGCTGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPYLSRN*NWGCFA
Trigger: AGCGAAACAGCCCCAATTCCAGTTCCTACTCAAGTA...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR CAA 72 bp CCAAGAGTTTTGAATCCTGGAGCAGGGCAAAGAATATaGATGGCCAAGTTTCCAACCCACTCTCTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PRVLNPGAGQRI*MAKFPTHSLRK
Trigger: CTTCCTTAGAGAGTGGGTTGGAAACTTGGCCATCAATATTCTTTGCCCTGCTCCAGGATTCAAAACTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAACATAAAGAATTCATTTaGAGCACGTCTGGCCGTAGT +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQHKEFI*STSGRS
Trigger: ACTACGGCCAGACGTGCTTCAAATGAATTCTTTATG...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAGGTGACACAGTAGGTTaGCACTGCCCTCCACACATA +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVGDTVG*HCPPHI
Trigger: TATGTGTGGAGGGCAGTGTCAACCTACTGTGTCACC...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAAGCTACAGCAGAGTGCTaGCAATCTTCTTTCAATACT +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQATAEC*QSSFNT
Trigger: AGTATTGAAAGAAGATTGTCAGCACTCTGCTGTAGC...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTACTTCGTCCTCCTGTCTaGACTGTGTCTCCTGGTACA +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVLRPPV*TVSPGT
Trigger: TGTACCAGGAGACACAGTGCAGACAGGAGGACGAAG...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGTGCCAAACACTGCCTTaGTCTGCTGCTGCTCAGATC +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLCQTLP*SAAAQI
Trigger: GATCTGAGCAGCAGCAGAGCAAGGCAGTGTTTGGCA...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAAACACCACAGGCTCCTaGAGGAGCTACATCCATTGG +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVNTTGS*RSYIHW
Trigger: CCAATGGATGTAGCTCCTGCAGGAGCCTGTGGTGTT...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAACAACAGGATATTCTGTaGTTTGAGATCCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQQQDIL*FEIPVD
Trigger: ATCCACAGGGATCTCAAACCACAGAATATCCTGTTG...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGGGTCATTCCCATCTTTaGACTGGCTTTCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLGHSHL*TGFQQA
Trigger: GGCCTGCTGAAAGCCAGTCCAAAGATGGGAATGACC...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGTGCTGCTGTTCCTGCTaGCAATGCCAGCATAACACC +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLCCCSC*QCQHNT
Trigger: GGTGTTATGCTGGCATTGCCAGCAGGAACAGCAGCA...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTATGGACCCCACTGAGGTaGTTCTTGTTCGAAGGACCA +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVWTPLR*FLFEGP
Trigger: TGGTCCTTCGAACAAGAACCACCTCAGTGGGGTCCA...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCTTGTTTCACAGCCATaGATGGGCTCAGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLLVSQP*MGSASQ
Trigger: CTGGGAAGCTGAGCCCATCCATGGCTGTGAAACAAG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR CAA 72 bp GTAGTTTTGTATTGTTCTTCCTTCTTAAGCTGCTGCTaGTTCTTTGGTAGTCACCACACTGTCCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: VVLYCSSFLSCC*FFGSHHTVLGW
Trigger: CCATCCCAGGACAGTGTGGTGACTACCAAAGAACAAGCAGCAGCTTAAGAAGGAAGAACAATACAAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAAATTAGCCAAGTAAGGTaGTGTTTCTCTGGGAATACT +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQISQVR*CFSGNT
Trigger: AGTATTCCCAGAGAAACATCACCTTACTTGGCTAAT...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTATCCAGGGCTGCAGATTaGACCATTTCCACAGCACAA +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVSRAAD*TISTAQ
Trigger: TTGTGCTGTGGAAATGGTTCAATCTGCAGCCCTGGA...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCAGGATTCGCATGGCTaGCGCAATCTGATGGAGAAA +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLQDSHG*RNLMEK
Trigger: TTTCTCCATCAGATTGCGGCAGCCATGCGAATCCTG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAATTATCCCTTTGCTGTaGAGGATTCGCATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVIIPLL*RIRMAA
Trigger: GGCAGCCATGCGAATCCTGCACAGCAAAGGGATAAT...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCATTTTTAACTGGAACTTaGTCAAGGAAAGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPFLTGT*SRKGWL
Trigger: CAGCCATCCTTTCCTTGAGCAAGTTCCAGTTAAAAA...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAACACAAGAAGAGTTCTTaGTACTATTACTCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQHKKSS*YYYSQS
Trigger: ACTCTGCGAGTAATAGTAGCAAGAACTCTTCTTGTG...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAAACCATGTGGGTTTGTaGCAGAGCTGGCAGTGGATA +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVNHVGL*QSWQWI
Trigger: TATCCACTGCCAGCTCTGGCACAAACCCACATGGTT...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
3UTR CAA 72 bp AGGCATTTTACCACTAATATAAGGAGGGATATAGTCTaGTCTGTAGGAGCCTGCATGACAGCTTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: RHFTTNIRRDIV*SVGACMTASKS
Trigger: ACTCTTGGAAGCTGTCATGCAGGCTCCTACAGACAAGACTATATCCCTCCTTATATTAGTGGTAAAATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCAGATAAGTTTTCTTCCTaGATATGCTGCATATCTGGA +
Preference number: 4 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPDKFSS*ICCISG
Trigger: TCCAGATATGCAGCATATTCAGGAAGAAAACTTATC...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGTGTCCACAGCAGCACTaGCTAAACTGTTCAGGAATG +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLCPQQH*LNCSGM
Trigger: CATTCCTGAACAGTTTAGTCAGTGCTGCTGTGGACA...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTACAGAGTGCTGCTTTCTaGGCTTCTGCTTGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVQSAAF*ASACSD
Trigger: ATCAGAACAAGCAGAAGCTCAGAAAGCAGCACTCTG...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAAAGGATGGCTGAAAAATaGTTCAAAGTCCATTCTATC +
Preference number: 4 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQRMAEK*FKVHSI
Trigger: GATAGAATGGACTTTGAAGCATTTTTCAGCCATCCT...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTACATCTCATCCAGGGCTaGAGATTGAACCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVHLIQG*RLNHFH
Trigger: GTGGAAATGGTTCAATCTGCAGCCCTGGATGAGATG...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAGGTTTGAGATCCCTGTaGATTATCCCTTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVGLRSL*IIPLLC
Trigger: GCACAGCAAAGGGATAATCCACAGGGATCTCAAACC...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCATATCTGGAAGGGATaGTGGAGAAGCAAAGCGACA +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLHIWKG*WRSKAT
Trigger: TGTCGCTTTGCTTCTCCACCATCCCTTCCAGATATG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGGGATATTCTGTGGTTTaGGATCCCTGTGGATTATCC +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLGYSVV*DPCGLS
Trigger: GGATAATCCACAGGGATCTCAAACCACAGAATATCC...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR GCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGTTCCAAAAGAAGGGCTaGCTTGTGGTAGCGATAAAC +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLFQKKG*LVVAIN
Trigger: GTTTATCGCTACCACAAGGCAGCCCTTCTTTTGGAA...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGTACTCGCAGAGTCTTTaGACACCTGTAGATAGTTGG +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLYSQSL*TPVDSW
Trigger: CCAACTATCTACAGGTGTCCAAAGACTCTGCGAGTA...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGAACATCATGTTCAGATaGCGTAAGGTGTCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLNIMFR*RKVSVC
Trigger: GCACACAGACACCTTACGCCATCTGAACATGATGTT...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCAAGGAAAGGATGGCTaGAAAATGCTTCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLQGKDG*KMLQSP
Trigger: TGGACTTTGAAGCATTTTTCAGCCATCCTTTCCTTG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCAGCACAATTATAGATaGGTTTCTCTGCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLQHNYR*VSLQSH
Trigger: GTGTGACTGCAGAGAAACTCATCTATAATTGTGCTG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CCA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCCAGAAAGACAGAGTTaGGCAATTCCTGAACATCAT +
Preference number: 4 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLPERQS*AIPEHH
Trigger: ATGATGTTCAGGAATTGCCCAACTCTGTCTTTCTGG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR TCA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAGTTTCTTGCACATGGTaGTGCAGAATTTGTATCTTT +
Preference number: 4 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVVSCTW*CRICIF
Trigger: AAAGATACAAATTCTGCATCACCATGTGCAAGAAAC...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS TCA 90 bp CTTGGTGGGAGAGGTCCCAAGGCTGCCAGGCCGACTAGGCTGAGGTaGGTAACTATACCCAGCTCCAGCATGGGACGGACACACAGGGTC +
Preference number: 5 (lower is better)
Translates to: LGGRGPKAARPTRLR*VTIPSSSMGRTHRV
Trigger: GACCCTGTGTGTCCGTCCCATGCTGGAGCTGGGTATAGTTACTCACCTCAGCCTAGTCGGCCTGGCAGCCTTGGGACCTCTCCCACCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp GTGTGGAGGAGACCCCACGGTGAAGAGGACAGCTCTGGCGCTTGCTaGTGTTCCTGCTGGCAATGCCAGCATAACACCACAGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: VWRRPHGEEDSSGAC*CSCWQCQHNTTGSC
Trigger: GCAGGAGCCTGTGGTGTTATGCTGGCATTGCCAGCAGGAACAGCAGCAAGCGCCAGAGCTGTCCTCTTCACCGTGGGGTCTCCTCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp CTTGACCTGAGCTTTGGCGAGATGCAGGGAAGCCGCCAGCAGCTGTaGTGCCTTCATGTACAACACCAGCTGCTCCACCCGCCCCCAATC +
Preference number: 5 (lower is better)
Translates to: LDLSFGEMQGSRQQL*CLHVQHQLLHPPPI
Trigger: GATTGGGGGCGGGTGGAGCAGCTGGTGTTGTACATGAAGGCAGCACAGCTGCTGGCGGCTTCCCTGCATCTCGCCAAAGCTCAGGTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp AGACCCCACGGTGAAGAGGACAGCTCTGGCGCTTGCTGCTGTTCCTaGTGGCAATGCCAGCATAACACCACAGGCTCCTGCAGGAGCTAC +
Preference number: 5 (lower is better)
Translates to: RPHGEEDSSGACCCS*WQCQHNTTGSCRSY
Trigger: GTAGCTCCTGCAGGAGCCTGTGGTGTTATGCTGGCATTGCCAGCAGGAACAGCAGCAAGCGCCAGAGCTGTCCTCTTCACCGTGGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp ACTGTGTGGAGGAGACCCCACGGTGAAGAGGACAGCTCTGGCGCTTaGTGCTGTTCCTGCTGGCAATGCCAGCATAACACCACAGGCTCC +
Preference number: 5 (lower is better)
Translates to: TVWRRPHGEEDSSGA*CCSCWQCQHNTTGS
Trigger: GGAGCCTGTGGTGTTATGCTGGCATTGCCAGCAGGAACAGCAGCAAGCGCCAGAGCTGTCCTCTTCACCGTGGGGTCTCCTCCACACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp GACCTGAGCTTTGGCGAGATGCAGGGAAGCCGCCAGCAGCTGTGCTaGCTTCATGTACAACACCAGCTGCTCCACCCGCCCCCAATCTTT +
Preference number: 5 (lower is better)
Translates to: DLSFGEMQGSRQQLC*LHVQHQLLHPPPIF
Trigger: AAAGATTGGGGGCGGGTGGAGCAGCTGGTGTTGTACATGAAGGCAGCACAGCTGCTGGCGGCTTCCCTGCATCTCGCCAAAGCTCAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS TCA 90 bp ACTTGTTTCACAGCCATGGATGGGCTCAGCTTCCCAGACTTGACCTaGGCTTTGGCGAGATGCAGGGAAGCCGCCAGCAGCTGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: TCFTAMDGLSFPDLT*ALARCREAASSCAA
Trigger: GGCAGCACAGCTGCTGGCGGCTTCCCTGCATCTCGCCAAAGCTCAGGTCAAGTCTGGGAAGCTGAGCCCATCCATGGCTGTGAAACAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CCA 90 bp GGTGCACTCTGCAGTCTAGCACCCAGTAAGAGTGACTGTGGTGCCTaGGTCTGTGGCACTGGAGAACCTGAGGAGTGCCTACTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: GALCSLAPSKSDCGA*VCGTGEPEECLLLA
Trigger: AGCCAGGAGTAGGCACTCCTCAGGTTCTCCAGTGCCACAGACCCAGGCACCACAGTCACTCTTACTGGGTGCTAGACTGCAGAGTGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CCA 90 bp TGTTCGAAGGACCATATGAGTACAAGTGGGGGCTGTGGCACTGTGTaGAGGAGACCCCACGGTGAAGAGGACAGCTCTGGCGCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: CSKDHMSTSGGCGTV*RRPHGEEDSSGACC
Trigger: GCAGCAAGCGCCAGAGCTGTCCTCTTCACCGTGGGGTCTCCTCCACACAGTGCCACAGCCCCCACTTGTACTCATATGGTCCTTCGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp CTGGAAGGGATGGTGGAGAAGCAAAGCGACAAGATGGTGAGCTGCTaGAGGAGCTTCCAGGGACAGGGCCAGAATACACAGGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: LEGMVEKQSDKMVSC*RSFQGQGQNTQALG
Trigger: TCCCAGTGCCTGTGTATTCTGGCCCTGTCCCTGGAAGCTCCTGCAGCAGCTCACCATCTTGTCGCTTTGCTTCTCCACCATCCCTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp GGTGAAGAGGACAGCTCTGGCGCTTGCTGCTGTTCCTGCTGGCAATaGCAGCATAACACCACAGGCTCCTGCAGGAGCTACATCCATTGG +
Preference number: 5 (lower is better)
Translates to: GEEDSSGACCCSCWQ*QHNTTGSCRSYIHW
Trigger: CCAATGGATGTAGCTCCTGCAGGAGCCTGTGGTGTTATGCTGGCATTGCCAGCAGGAACAGCAGCAAGCGCCAGAGCTGTCCTCTTCACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp TATCTGGAAGGGATGGTGGAGAAGCAAAGCGACAAGATGGTGAGCTaGTGCAGGAGCTTCCAGGGACAGGGCCAGAATACACAGGCACTG +
Preference number: 5 (lower is better)
Translates to: YLEGMVEKQSDKMVS*CRSFQGQGQNTQAL
Trigger: CAGTGCCTGTGTATTCTGGCCCTGTCCCTGGAAGCTCCTGCAGCAGCTCACCATCTTGTCGCTTTGCTTCTCCACCATCCCTTCCAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp ACAGATCTGCCAAACACTGCCTTGCTCTGCTGCTGCTCAGATCGATaGCTCTCGCTTCCTTGTACTGAGAGGCAGTGGGAACACTCACGA +
Preference number: 5 (lower is better)
Translates to: TDLPNTALLCCCSDR*LSLPCTERQWEHSR
Trigger: TCGTGAGTGTTCCCACTGCCTCTCAGTACAAGGAAGCGAGAGGCATCGATCTGAGCAGCAGCAGAGCAAGGCAGTGTTTGGCAGATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp TTCCCAGTACTGACAGATCTGCCAAACACTGCCTTGCTCTGCTGCTaGTCAGATCGATGCCTCTCGCTTCCTTGTACTGAGAGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: FPVLTDLPNTALLCC*SDRCLSLPCTERQW
Trigger: CCACTGCCTCTCAGTACAAGGAAGCGAGAGGCATCGATCTGAGCAGCAGCAGAGCAAGGCAGTGTTTGGCAGATCTGTCAGTACTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp CCACACATACTCGGCCACTTGCAGAACACAAGGAACCTCCTGAGCTaGTGGACCCCACTGAGGTGGTTCTTGTTCGAAGGACCATATGAG +
Preference number: 5 (lower is better)
Translates to: PHILGHLQNTRNLLS*WTPLRWFLFEGPYE
Trigger: CTCATATGGTCCTTCGAACAAGAACCACCTCAGTGGGGTCCAGCAGCTCAGGAGGTTCCTTGTGTTCTGCAAGTGGCCGAGTATGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CCA 90 bp TTGCAGAACACAAGGAACCTCCTGAGCTGCTGGACCCCACTGAGGTaGTTCTTGTTCGAAGGACCATATGAGTACAAGTGGGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: LQNTRNLLSCWTPLR*FLFEGPYEYKWGLW
Trigger: CCACAGCCCCCACTTGTACTCATATGGTCCTTCGAACAAGAACCACCTCAGTGGGGTCCAGCAGCTCAGGAGGTTCCTTGTGTTCTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp AACTTCCCAGTACTGACAGATCTGCCAAACACTGCCTTGCTCTGCTaGTGCTCAGATCGATGCCTCTCGCTTCCTTGTACTGAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: NFPVLTDLPNTALLC*CSDRCLSLPCTERQ
Trigger: CTGCCTCTCAGTACAAGGAAGCGAGAGGCATCGATCTGAGCAGCAGCAGAGCAAGGCAGTGTTTGGCAGATCTGTCAGTACTGGGAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CCA 90 bp CACATACTCGGCCACTTGCAGAACACAAGGAACCTCCTGAGCTGCTaGACCCCACTGAGGTGGTTCTTGTTCGAAGGACCATATGAGTAC +
Preference number: 5 (lower is better)
Translates to: HILGHLQNTRNLLSC*TPLRWFLFEGPYEY
Trigger: GTACTCATATGGTCCTTCGAACAAGAACCACCTCAGTGGGGTCCAGCAGCTCAGGAGGTTCCTTGTGTTCTGCAAGTGGCCGAGTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS TCA 90 bp GCACTGACTAAACTGTTCAGGAATGGTACCAACCAAAGGGGATGGTaGGTAAGGCCTGGAAGAGCCAGTAGAGAGTCTTCGTCCTCCTGT +
Preference number: 5 (lower is better)
Translates to: ALTKLFRNGTNQRGW*VRPGRASRESSSSC
Trigger: ACAGGAGGACGAAGACTCTCTACTGGCTCTTCCAGGCCTTACTCACCATCCCCTTTGGTTGGTACCATTCCTGAACAGTTTAGTCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CCA 90 bp CCGTGTCACAAGAAGAGTTCTTGCTACTATTACTCGCAGAGTCTTTaGACACCTGTAGATAGTTGGGAGGACCCAACGGTGGGGAGGATA +
Preference number: 5 (lower is better)
Translates to: PCHKKSSCYYYSQSL*TPVDSWEDPTVGRI
Trigger: TATCCTCCCCACCGTTGGGTCCTCCCAACTATCTACAGGTGTCCAAAGACTCTGCGAGTAATAGTAGCAAGAACTCTTCTTGTGACACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCCCACGAGGTCCCGCTaGCAGTACTCGAAGTCGCCC +
Preference number: 5 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLPTRSR*QYSKSP
Trigger: GGGCGACTTCGAGTACTGCAAGCGGGACCTCGTGGG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGGAGGACCCCGTGTGCTaGGTGGGAGAGGTCCCAAGG +
Preference number: 5 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLEDPVC*VGEVPR
Trigger: CCTTGGGACCTCTCCCACCAAGCACACGGGGTCCTC...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCAGGGTCATTCCCATCTTaGGACTGGCTTTCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPGSFPS*DWLSAG
Trigger: GCCTGCTGAAAGCCAGTCCAAAGATGGGAATGACCC...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp CTGCAGGAGCTACATCCATTGGTCGTTCTGTGTTTAAACTATCCGTaGTGCCCTGGTGTCCACCTAAAGGTGCCTTTACTTGTTGTTCTG +
Preference number: 5 (lower is better)
Translates to: LQELHPLVVLCLNYP*CPGVHLKVPLLVVL
Trigger: CAGAACAACAAGTAAAGGCACCTTTAGGTGGACACCAGGGCAGCACGGATAGTTTAAACACAGAACGACCAATGGATGTAGCTCCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CCA 90 bp GTCAGGTCCAGCACACACTCAGTAAACATTAACATCATGTTCAGATaGCGTAAGGTGTCTGTGTGCTCTCGCTCCATCAGTGTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: VRSSTHSVNINIMFR*RKVSVCSRSISVSS
Trigger: AGAGGAGACACTGATGGAGCGAGAGCACACAGACACCTTACGCCATCTGAACATGATGTTAATGTTTACTGAGTGTGTGCTGGACCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp CTTGAGAGTCACAGTGCAGTTTCAACACTTGCCTACTTCCTGTCTTCACACCAAGCCAGGTCTCCACCATaGCAATACTCCATCACCAGA +
Preference number: 5 (lower is better)
Translates to: LESHSAVSTLAYFLSSHQARSPP*QYSITR
Trigger: TCTGGTGATGGAGTATTGCAATGGTGGAGACCTGGC...TTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGAAACTGCACTGTGACTCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGGGACAGCTCTGGCGCTaGCTGCTGTTCCTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLGQLWR*LLFLLA
Trigger: TGCCAGCAGGAACAGCAGCAAGCGCCAGAGCTGTCC...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS TCA 90 bp TCACGAGGGTCATTCCCATCTTTGGACTGGCTTTCAGCAGGCCCATaGCGAGTAACCAAGGCTAACAGGTTAGAAGATGCTTGTGTTTTA +
Preference number: 5 (lower is better)
Translates to: SRGSFPSLDWLSAGP*RVTKANRLEDACVL
Trigger: TAAAACACAAGCATCTTCTAACCTGTTAGCCTTGGTTACTCGTCATGGGCCTGCTGAAAGCCAGTCCAAAGATGGGAATGACCCTCGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS TCA 90 bp CCTTACTTGAGTAGGAACTGGAATTGGGGCTGTTTCGCTGTGAGGTaGCACAGTAGGTTGACACTGCCCTCCACACATAAAGAATTCATT +
Preference number: 5 (lower is better)
Translates to: PYLSRNWNWGCFAVR*HSRLTLPSTHKEFI
Trigger: AATGAATTCTTTATGTGTGGAGGGCAGTGTCAACCTACTGTGTCACCTCACAGCGAAACAGCCCCAATTCCAGTTCCTACTCAAGTAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp CAGGAGCTACATCCATTGGTCGTTCTGTGTTTAAACTATCCGTGCTaGCCTGGTGTCCACCTAAAGGTGCCTTTACTTGTTGTTCTGATA +
Preference number: 5 (lower is better)
Translates to: QELHPLVVLCLNYPC*PGVHLKVPLLVVLI
Trigger: TATCAGAACAACAAGTAAAGGCACCTTTAGGTGGACACCAGGGCAGCACGGATAGTTTAAACACAGAACGACCAATGGATGTAGCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCGGGAGCCATGTACATaGGGGATCCACACAGTGTCG +
Preference number: 5 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLREPCT*GIHTVS
Trigger: CGACACTGTGTGGATCCCCAATGTACATGGCTCCCG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAGAGAACCATGTGGGTTaGTGCCAGAGCTGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVENHVG*CQSWQW
Trigger: CCACTGCCAGCTCTGGCACAAACCCACATGGTTCTC...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CCA 90 bp TCTTGCTACTATTACTCGCAGAGTCTTTGGACACCTGTAGATAGTTaGGAGGACCCAACGGTGGGGAGGATAAGTTTTCTTCCTGAATAT +
Preference number: 5 (lower is better)
Translates to: SCYYYSQSLWTPVDS*EDPTVGRISFLPEY
Trigger: ATATTCAGGAAGAAAACTTATCCTCCCCACCGTTGGGTCCTCCCAACTATCTACAGGTGTCCAAAGACTCTGCGAGTAATAGTAGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCACAGAGTTCCTTTAGCTaGCAAATAATCTGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPQSSFS*QIICQV
Trigger: GACCTGGCAGATTATTTGCAAGCTAAAGGAACTCTG...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCTGCCAAACACTGCCTaGCTCTGCTGCTGCTCAGAT +
Preference number: 5 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLLPNTA*LCCCSD
Trigger: ATCTGAGCAGCAGCAGAGCAAGGCAGTGTTTGGCAG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TGGGTGACAGAACCAAGATGTAATCCCAAATGTATCACCTCCTGTTCCATGCCATCACAAGAAGAGTTCTaGCTACTATTACTCGCAGAG +
Preference number: 5 (lower is better)
Translates to: WVTEPRCNPKCITSCSMPSQEEF*LLLLAE
Trigger: CTCTGCGAGTAATAGTAGCAAGAACTCTTCTTGTGA...TGGCATGGAACAGGAGGTGATACATTTGGGATTACATCTTGGTTCTGTCACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp TGTGTGGAACCAAAACAAAGTCATCCGTGTCACAAGAAGAGTTCTTaGTACTATTACTCGCAGAGTCTTTGGACACCTGTAGATAGTTGG +
Preference number: 5 (lower is better)
Translates to: CVEPKQSHPCHKKSS*YYYSQSLWTPVDSW
Trigger: CCAACTATCTACAGGTGTCCAAAGACTCTGCGAGTAATAGTAGCAAGAACTCTTCTTGTGACACGGATGACTTTGTTTTGGTTCCACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCTGTGGATTATCCCTTaGCTGTGCAGGATTCGCATG +
Preference number: 5 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLLWIIP*LCRIRM
Trigger: CATGCGAATCCTGCACAGCAAAGGGATAATCCACAG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTAATCCAGGGCTGCAGATaGAACCATTTCCACAGCACA +
Preference number: 5 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVIQGCR*NHFHST
Trigger: TGTGCTGTGGAAATGGTTCAATCTGCAGCCCTGGAT...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp TCTGATAGTATCTTCACTCAGAGTTCCTTTAGCTTGCAAATAATCTaGCAGGTCTCCACCATTGCAATACTCCATCACCAGAAAGACAGA +
Preference number: 5 (lower is better)
Translates to: SDSIFTQSSFSLQII*QVSTIAILHHQKDR
Trigger: TCTGTCTTTCTGGTGATGGAGTATTGCAATGGTGGAGACCTGGCAGATTATTTGCAAGCTAAAGGAACTCTGAGTGAAGATACTATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGACAGTGTCGCTGCCATaGTGTTACTATGTAGGTACC +
Preference number: 5 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLTVSLP*CYYVGT
Trigger: GGTACCTACATAGTAACACAATGGCAGCGACACTGT...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGGTACTACTGCAGATCTaGGAGAACCATGTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLVLLQI*ENHVGL
Trigger: CAAACCCACATGGTTCTCCAAGATCTGCAGTAGTAC...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTATGGTCTGACGAGATGTaGTGTGGAACCAAAACAAAG +
Preference number: 5 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVWSDEM*CGTKTK
Trigger: CTTTGTTTTGGTTCCACACAACATCTCGTCAGACCA...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCAGGAGCTACATCCATaGGTCGTTCTGTGTTTAAAC +
Preference number: 5 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLQELHP*VVLCLN
Trigger: GTTTAAACACAGAACGACCAATGGATGTAGCTCCTG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGAGGATATTCTGTGGTTaGAGATCCCTGTGGATTATC +
Preference number: 5 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLRIFCG*RSLWII
Trigger: GATAATCCACAGGGATCTCAAACCACAGAATATCCT...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCTTAGCATCATAATGTaGAGACATAATAACCTCGGG +
Preference number: 5 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLLSIIM*RHNNLG
Trigger: CCCGAGGTTATTATGTCTCAACATTATGATGCTAAG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGGTCCATTCTATCCTTTaGATTTCTCTGAAGCAAACC +
Preference number: 5 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLVHSIL*ISLKQT
Trigger: GGTTTGCTTCAGAGAAATCAAAAGGATAGAATGGAC...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 90 bp CAGCAGAGTGCTGACAATCTTCTTTCAATACTACATTTATACTTATaGACATTTTCAACATCTGTAGGGTCCTGCAGGATCTTACTTAAG +
Preference number: 5 (lower is better)
Translates to: QQSADNLLSILHLYL*TFSTSVGSCRILLK
Trigger: CTTAAGTAAGATCCTGCAGGACCCTACAGATGTTGAAAATGTGCATAAGTATAAATGTAGTATTGAAAGAAGATTGTCAGCACTCTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTATGTGTTTTAGGGATTTaGAAAGGAGCTGTAGTCTTA +
Preference number: 5 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVCVLGI*KGAVVL
Trigger: TAAGACTACAGCTCCTTTCAAAATCCCTAAAACACA...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGCAGGTTAGAAGATGCTaGTGTTTTAGGGATTTTGAA +
Preference number: 5 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLQVRRC*CFRDFE
Trigger: TTCAAAATCCCTAAAACACAAGCATCTTCTAACCTG...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp TTCACAATTCATCCAAGAGTCACCTTTTGTTTCTTCTTAAGATTCCTCCTCCTGTTTTCTGTAAGTTTCTaGCACATGGTGATGCAGAAT +
Preference number: 5 (lower is better)
Translates to: FTIHPRVTFCFFLRFLLLFSVSF*HMVMQN
Trigger: ATTCTGCATCACCATGTGCAAGAAACTTACAGAAAA...CAGGAGGAGGAATCTTAAGAAGAAACAAAAGGTGACTCTTGGATGAATTGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS-3UTR CAA 90 bp AGAGTTTCTGTGCAGCTATCAGAGAGTAGGTCAGTATGTGTAAGTTTTGAAGTATCTGCAGTCACACTGTaGATTTCATCAATAAATCTC +
Preference number: 5 (lower is better)
Translates to: RVSVQLSESRSVCVSFEVSAVTL*ISSINL
Trigger: GAGATTTATTGATGAAATCAACAGTGTGACTGCAGA...TACTTCAAAACTTACACATACTGACCTACTCTCTGATAGCTGCACAGAAACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CAA 90 bp AGCCCAACCCTGGTCCAGGAGGGGAGCCCACACATACTCGGCCACTaGCAGAACACAAGGAACCTCCTGAGCTGCTGGACCCCACTGAGG +
Preference number: 6 (lower is better)
Translates to: SPTLVQEGSPHILGH*QNTRNLLSCWTPLR
Trigger: CCTCAGTGGGGTCCAGCAGCTCAGGAGGTTCCTTGTGTTCTGCAAGTGGCCGAGTATGTGTGGGCTCCCCTCCTGGACCAGGGTTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp TTTGGCGAGATGCAGGGAAGCCGCCAGCAGCTGTGCTaGCTTCATGTACAACACCAGCTGCTCCACCCGCCC +
Preference number: 6 (lower is better)
Translates to: FGEMQGSRQQLC*LHVQHQLLHPP
Trigger: GGGCGGGTGGAGCAGCTGGTGTTGTACATGAAGGCAGCACAGCTGCTGGCGGCTTCCCTGCATCTCGCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS TCA 72 bp ACAGCCATGGATGGGCTCAGCTTCCCAGACTTGACCTaGGCTTTGGCGAGATGCAGGGAAGCCGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: TAMDGLSFPDLT*ALARCREAASS
Trigger: GCTGCTGGCGGCTTCCCTGCATCTCGCCAAAGCTCAGGTCAAGTCTGGGAAGCTGAGCCCATCCATGGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp AAGAACCAGTCAGAATTCCGTGGAGAGGACCCCGTGTaGTTGGTGGGAGAGGTCCCAAGGCTGCCAGGCCGA +
Preference number: 6 (lower is better)
Translates to: KNQSEFRGEDPV*LVGEVPRLPGR
Trigger: TCGGCCTGGCAGCCTTGGGACCTCTCCCACCAAGCACACGGGGTCCTCTCCACGGAATTCTGACTGGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp AGCTTTGGCGAGATGCAGGGAAGCCGCCAGCAGCTGTaGTGCCTTCATGTACAACACCAGCTGCTCCACCCG +
Preference number: 6 (lower is better)
Translates to: SFGEMQGSRQQL*CLHVQHQLLHP
Trigger: CGGGTGGAGCAGCTGGTGTTGTACATGAAGGCAGCACAGCTGCTGGCGGCTTCCCTGCATCTCGCCAAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CAA 72 bp CTGGTCCAGGAGGGGAGCCCACACATACTCGGCCACTaGCAGAACACAAGGAACCTCCTGAGCTGCTGGACC +
Preference number: 6 (lower is better)
Translates to: LVQEGSPHILGH*QNTRNLLSCWT
Trigger: GGTCCAGCAGCTCAGGAGGTTCCTTGTGTTCTGCAAGTGGCCGAGTATGTGTGGGCTCCCCTCCTGGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp GACAGCTCTGGCGCTTGCTGCTGTTCCTGCTGGCAATaGCAGCATAACACCACAGGCTCCTGCAGGAGCTAC +
Preference number: 6 (lower is better)
Translates to: DSSGACCCSCWQ*QHNTTGSCRSY
Trigger: GTAGCTCCTGCAGGAGCCTGTGGTGTTATGCTGGCATTGCCAGCAGGAACAGCAGCAAGCGCCAGAGCTGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp GCCAGCAGCTGTGCTGCCTTCATGTACAACACCAGCTaGTCCACCCGCCCCCAATCTTTGCTTAGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: ASSCAAFMYNTS*STRPQSLLSWL
Trigger: CAGCCAGCTAAGCAAAGATTGGGGGCGGGTGGAGCAGCTGGTGTTGTACATGAAGGCAGCACAGCTGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS TCA 72 bp CTGCTGCTCAGATCGATGCCTCTCGCTTCCTTGTACTaGGAGGCAGTGGGAACACTCACGAGGGTCATTCCC +
Preference number: 6 (lower is better)
Translates to: LLLRSMPLASLY*EAVGTLTRVIP
Trigger: GGGAATGACCCTCGTGAGTGTTCCCACTGCCTCTCAGTACAAGGAAGCGAGAGGCATCGATCTGAGCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp CTCGGCCACTTGCAGAACACAAGGAACCTCCTGAGCTaGTGGACCCCACTGAGGTGGTTCTTGTTCGAAGGA +
Preference number: 6 (lower is better)
Translates to: LGHLQNTRNLLS*WTPLRWFLFEG
Trigger: TCCTTCGAACAAGAACCACCTCAGTGGGGTCCAGCAGCTCAGGAGGTTCCTTGTGTTCTGCAAGTGGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp CACTCTCCTGAATCTGGTACAAGGACACAGCAGATGTaGACAGCTCAGGGTTCCCACCCCTCACTGCCGTCA +
Preference number: 6 (lower is better)
Translates to: HSPESGTRTQQM*TAQGSHPSLPS
Trigger: TGACGGCAGTGAGGGGTGGGAACCCTGAGCTGTGCACATCTGCTGTGTCCTTGTACCAGATTCAGGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CCA 72 bp GGCCACTTGCAGAACACAAGGAACCTCCTGAGCTGCTaGACCCCACTGAGGTGGTTCTTGTTCGAAGGACCA +
Preference number: 6 (lower is better)
Translates to: GHLQNTRNLLSC*TPLRWFLFEGP
Trigger: TGGTCCTTCGAACAAGAACCACCTCAGTGGGGTCCAGCAGCTCAGGAGGTTCCTTGTGTTCTGCAAGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS TCA 72 bp GACCCCACTGAGGTGGTTCTTGTTCGAAGGACCATATaGGTACAAGTGGGGGCTGTGGCACTGTGTGGAGGA +
Preference number: 6 (lower is better)
Translates to: DPTEVVLVRRTI*VQVGAVALCGG
Trigger: TCCTCCACACAGTGCCACAGCCCCCACTTGTACTCATATGGTCCTTCGAACAAGAACCACCTCAGTGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp ATGGTGGAGAAGCAAAGCGACAAGATGGTGAGCTGCTaGAGGAGCTTCCAGGGACAGGGCCAGAATACACAG +
Preference number: 6 (lower is better)
Translates to: MVEKQSDKMVSC*RSFQGQGQNTQ
Trigger: CTGTGTATTCTGGCCCTGTCCCTGGAAGCTCCTGCAGCAGCTCACCATCTTGTCGCTTTGCTTCTCCACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CAA 90 bp AACACAAGGAACCTCCTGAGCTGCTGGACCCCACTGAGGTGGTTCTaGTTCGAAGGACCATATGAGTACAAGTGGGGGCTGTGGCACTGT +
Preference number: 6 (lower is better)
Translates to: NTRNLLSCWTPLRWF*FEGPYEYKWGLWHC
Trigger: ACAGTGCCACAGCCCCCACTTGTACTCATATGGTCCTTCGAACAAGAACCACCTCAGTGGGGTCCAGCAGCTCAGGAGGTTCCTTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp CTGACAGATCTGCCAAACACTGCCTTGCTCTGCTGCTaGTCAGATCGATGCCTCTCGCTTCCTTGTACTGAG +
Preference number: 6 (lower is better)
Translates to: LTDLPNTALLCC*SDRCLSLPCTE
Trigger: CTCAGTACAAGGAAGCGAGAGGCATCGATCTGAGCAGCAGCAGAGCAAGGCAGTGTTTGGCAGATCTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp CCAGTACTGACAGATCTGCCAAACACTGCCTTGCTCTaGTGCTGCTCAGATCGATGCCTCTCGCTTCCTTGT +
Preference number: 6 (lower is better)
Translates to: PVLTDLPNTALL*CCSDRCLSLPC
Trigger: ACAAGGAAGCGAGAGGCATCGATCTGAGCAGCAGCAGAGCAAGGCAGTGTTTGGCAGATCTGTCAGTACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp GTACTGACAGATCTGCCAAACACTGCCTTGCTCTGCTaGTGCTCAGATCGATGCCTCTCGCTTCCTTGTACT +
Preference number: 6 (lower is better)
Translates to: VLTDLPNTALLC*CSDRCLSLPCT
Trigger: AGTACAAGGAAGCGAGAGGCATCGATCTGAGCAGCAGCAGAGCAAGGCAGTGTTTGGCAGATCTGTCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CCA 72 bp ACAAGGAACCTCCTGAGCTGCTGGACCCCACTGAGGTaGTTCTTGTTCGAAGGACCATATGAGTACAAGTGG +
Preference number: 6 (lower is better)
Translates to: TRNLLSCWTPLR*FLFEGPYEYKW
Trigger: CCACTTGTACTCATATGGTCCTTCGAACAAGAACCACCTCAGTGGGGTCCAGCAGCTCAGGAGGTTCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp GAAGCCCATGGGGCTGGTATTAGACCTTCGTACTACTaGAGATCTTGGAGAACCATGTGGGTTTGTGCCAGA +
Preference number: 6 (lower is better)
Translates to: EAHGAGIRPSYY*RSWRTMWVCAR
Trigger: TCTGGCACAAACCCACATGGTTCTCCAAGATCTGCAGTAGTACGAAGGTCTAATACCAGCCCCATGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS TCA 72 bp GGAGGACCCAACGGTGGGGAGGATAAGTTTTCTTCCTaGATATGCTGCATATCTGGAAGGGATGGTGGAGAA +
Preference number: 6 (lower is better)
Translates to: GGPNGGEDKFSS*ICCISGRDGGE
Trigger: TTCTCCACCATCCCTTCCAGATATGCAGCATATTCAGGAAGAAAACTTATCCTCCCCACCGTTGGGTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS TCA 72 bp AGGTTGACACTGCCCTCCACACATAAAGAATTCATTTaGAGCACGTCTGGCCGTAGTCCCCATTGGCATGTC +
Preference number: 6 (lower is better)
Translates to: RLTLPSTHKEFI*STSGRSPHWHV
Trigger: GACATGCCAATGGGGACTACGGCCAGACGTGCTTCAAATGAATTCTTTATGTGTGGAGGGCAGTGTCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS TCA 72 bp AGTAGGAACTGGAATTGGGGCTGTTTCGCTGTGAGGTaGCACAGTAGGTTGACACTGCCCTCCACACATAAA +
Preference number: 6 (lower is better)
Translates to: SRNWNWGCFAVR*HSRLTLPSTHK
Trigger: TTTATGTGTGGAGGGCAGTGTCAACCTACTGTGTCACCTCACAGCGAAACAGCCCCAATTCCAGTTCCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS TCA 72 bp AAACTGTTCAGGAATGGTACCAACCAAAGGGGATGGTaGGTAAGGCCTGGAAGAGCCAGTAGAGAGTCTTCG +
Preference number: 6 (lower is better)
Translates to: KLFRNGTNQRGW*VRPGRASRESS
Trigger: CGAAGACTCTCTACTGGCTCTTCCAGGCCTTACTCACCATCCCCTTTGGTTGGTACCATTCCTGAACAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CCA 72 bp CGTCTGGCCGTAGTCCCCATTGGCATGTCATATGAGTaGTCTGACGAGATGTTGTGTGGAACCAAAACAAAG +
Preference number: 6 (lower is better)
Translates to: RLAVVPIGMSYE*SDEMLCGTKTK
Trigger: CTTTGTTTTGGTTCCACACAACATCTCGTCAGACCACTCATATGACATGCCAATGGGGACTACGGCCAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CAA 90 bp CCTCGGGAGCCATGTACATTGGGGATCCACACAGTGTCGCTGCCATaGTGTTACTATGTAGGTACCGTGCGAAACCAAAATCAGCTATTT +
Preference number: 6 (lower is better)
Translates to: PREPCTLGIHTVSLP*CYYVGTVRNQNQLF
Trigger: AAATAGCTGATTTTGGTTTCGCACGGTACCTACATAGTAACACAATGGCAGCGACACTGTGTGGATCCCCAATGTACATGGCTCCCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS TCA 72 bp TCATTCCCATCTTTGGACTGGCTTTCAGCAGGCCCATaGCGAGTAACCAAGGCTAACAGGTTAGAAGATGCT +
Preference number: 6 (lower is better)
Translates to: SFPSLDWLSAGP*RVTKANRLEDA
Trigger: AGCATCTTCTAACCTGTTAGCCTTGGTTACTCGTCATGGGCCTGCTGAAAGCCAGTCCAAAGATGGGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CAA 90 bp GCCGTAGTCCCCATTGGCATGTCATATGAGTGGTCTGACGAGATGTaGTGTGGAACCAAAACAAAGTCATCCGTGTCACAAGAAGAGTTC +
Preference number: 6 (lower is better)
Translates to: AVVPIGMSYEWSDEM*CGTKTKSSVSQEEF
Trigger: GAACTCTTCTTGTGACACGGATGACTTTGTTTTGGTTCCACACAACATCTCGTCAGACCACTCATATGACATGCCAATGGGGACTACGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp CATCCATTGGTCGTTCTGTGTTTAAACTATCCGTGCTaGCCTGGTGTCCACCTAAAGGTGCCTTTACTTGTT +
Preference number: 6 (lower is better)
Translates to: HPLVVLCLNYPC*PGVHLKVPLLV
Trigger: AACAAGTAAAGGCACCTTTAGGTGGACACCAGGGCAGCACGGATAGTTTAAACACAGAACGACCAATGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp CTACATCCATTGGTCGTTCTGTGTTTAAACTATCCGTaGTGCCCTGGTGTCCACCTAAAGGTGCCTTTACTT +
Preference number: 6 (lower is better)
Translates to: LHPLVVLCLNYP*CPGVHLKVPLL
Trigger: AAGTAAAGGCACCTTTAGGTGGACACCAGGGCAGCACGGATAGTTTAAACACAGAACGACCAATGGATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp ATTAACATCATGTTCAGATGGCGTAAGGTGTCTGTGTaGTCTCGCTCCATCAGTGTCTCCTCTGGTAGTTCA +
Preference number: 6 (lower is better)
Translates to: INIMFRWRKVSV*SRSISVSSGSS
Trigger: TGAACTACCAGAGGAGACACTGATGGAGCGAGAGCACACAGACACCTTACGCCATCTGAACATGATGTTAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CCA 72 bp TATTACTCGCAGAGTCTTTGGACACCTGTAGATAGTTaGGAGGACCCAACGGTGGGGAGGATAAGTTTTCTT +
Preference number: 6 (lower is better)
Translates to: YYSQSLWTPVDS*EDPTVGRISFL
Trigger: AAGAAAACTTATCCTCCCCACCGTTGGGTCCTCCCAACTATCTACAGGTGTCCAAAGACTCTGCGAGTAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CCA 72 bp AAGAAGAGTTCTTGCTACTATTACTCGCAGAGTCTTTaGACACCTGTAGATAGTTGGGAGGACCCAACGGTG +
Preference number: 6 (lower is better)
Translates to: KKSSCYYYSQSL*TPVDSWEDPTV
Trigger: CACCGTTGGGTCCTCCCAACTATCTACAGGTGTCCAAAGACTCTGCGAGTAATAGTAGCAAGAACTCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CCA 72 bp AGACCTTCGTACTACTGCAGATCTTGGAGAACCATGTaGGTTTGTGCCAGAGCTGGCAGTGGATATAAGATT +
Preference number: 6 (lower is better)
Translates to: RPSYYCRSWRTM*VCARAGSGYKI
Trigger: AATCTTATATCCACTGCCAGCTCTGGCACAAACCCACATGGTTCTCCAAGATCTGCAGTAGTACGAAGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CAA 72 bp CCATGTACATTGGGGATCCACACAGTGTCGCTGCCATaGTGTTACTATGTAGGTACCGTGCGAAACCAAAAT +
Preference number: 6 (lower is better)
Translates to: PCTLGIHTVSLP*CYYVGTVRNQN
Trigger: ATTTTGGTTTCGCACGGTACCTACATAGTAACACAATGGCAGCGACACTGTGTGGATCCCCAATGTACATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CCA 72 bp CACCATTGCAATACTCCATCACCAGAAAGACAGAGTTaGGCAATTCCTGAACATCATAGAGCGCTACGATGT +
Preference number: 6 (lower is better)
Translates to: HHCNTPSPERQS*AIPEHHRALRC
Trigger: ACATCGTAGCGCTCTATGATGTTCAGGAATTGCCCAACTCTGTCTTTCTGGTGATGGAGTATTGCAATGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CAA 72 bp CCCATTGGCATGTCATATGAGTGGTCTGACGAGATGTaGTGTGGAACCAAAACAAAGTCATCCGTGTCACAA +
Preference number: 6 (lower is better)
Translates to: PIGMSYEWSDEM*CGTKTKSSVSQ
Trigger: TTGTGACACGGATGACTTTGTTTTGGTTCCACACAACATCTCGTCAGACCACTCATATGACATGCCAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp ATCTTCACTCAGAGTTCCTTTAGCTTGCAAATAATCTaGCAGGTCTCCACCATTGCAATACTCCATCACCAG +
Preference number: 6 (lower is better)
Translates to: IFTQSSFSLQII*QVSTIAILHHQ
Trigger: CTGGTGATGGAGTATTGCAATGGTGGAGACCTGGCAGATTATTTGCAAGCTAAAGGAACTCTGAGTGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS GCA 72 bp CCAAAACAAAGTCATCCGTGTCACAAGAAGAGTTCTTaGTACTATTACTCGCAGAGTCTTTGGACACCTGTA +
Preference number: 6 (lower is better)
Translates to: PKQSHPCHKKSS*YYYSQSLWTPV
Trigger: TACAGGTGTCCAAAGACTCTGCGAGTAATAGTAGCAAGAACTCTTCTTGTGACACGGATGACTTTGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CAA 72 bp ACCAAAACAAAGTCATCCGTGTCACAAGAAGAGTTCTaGCTACTATTACTCGCAGAGTCTTTGGACACCTGT +
Preference number: 6 (lower is better)
Translates to: TKTKSSVSQEEF*LLLLAESLDTC
Trigger: ACAGGTGTCCAAAGACTCTGCGAGTAATAGTAGCAAGAACTCTTCTTGTGACACGGATGACTTTGTTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4
CDS CAA 72 bp CACTCTGATAGTATCTTCACTCAGAGTTCCTTTAGCTaGCAAATAATCTGCCAGGTCTCCACCATTGCAATA +
Preference number: 6 (lower is better)
Translates to: HSDSIFTQSSFS*QIICQVSTIAI
Trigger: TATTGCAATGGTGGAGACCTGGCAGATTATTTGCAAGCTAAAGGAACTCTGAGTGAAGATACTATCAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000004920.4