Pregenerated sensors for ULBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079685Ensembl transcript IDs: ENSMUST00000169796.4, ENSMUST00000177585.9, ENSMUST00000218087.2
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTGGAGAGCTGCAGGGCTGCAGGGCTGCACCAGGCGTCAGGACTaGGTGAACTGTAGAGGTGAGGTGCAGGACCCCAGGATCCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: QWRAAGLQGCTRRQD*VNCRGEVQDPRIQQ Trigger: CTGCTGGATCCTGGGGTCCTGCACCTCACCTCTACAGTTCACTCAGTCCTGACGCCTGGTGCAGCCCTGCAGCCCTGCAGCTCTCCACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR GCA 90 bp | CAATGCAGGTGGTTAGAGGAGCTGGTAAGGAAGCCAGTGGAGAGCTaGAGGGCTGCAGGGCTGCACCAGGCGTCAGGACTGAGTGAACTG | + |
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Preference number: 1 (lower is better) Translates to: QCRWLEELVRKPVES*RAAGLHQASGLSEL Trigger: CAGTTCACTCAGTCCTGACGCCTGGTGCAGCCCTGCAGCCCTGCAGCTCTCCACTGGCTTCCTTACCAGCTCCTCTAACCACCTGCATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR CCA 90 bp | CTGGAGGCAGAGAGAGGGATTCTAGTCTCACAGACTCAATGCAGGTaGTTAGAGGAGCTGGTAAGGAAGCCAGTGGAGAGCTGCAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: LEAERGILVSQTQCR*LEELVRKPVESCRA Trigger: AGCCCTGCAGCTCTCCACTGGCTTCCTTACCAGCTCCTCTAACCACCTGCATTGAGTCTGTGAGACTAGAATCCCTCTCTCTGCCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR GCA 90 bp | ACCAGACTGGAGGCAGAGAGAGGGATTCTAGTCTCACAGACTCAATaGAGGTGGTTAGAGGAGCTGGTAAGGAAGCCAGTGGAGAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: TRLEAERGILVSQTQ*RWLEELVRKPVESC Trigger: GCAGCTCTCCACTGGCTTCCTTACCAGCTCCTCTAACCACCTGCATTGAGTCTGTGAGACTAGAATCCCTCTCTCTGCCTCCAGTCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR TCA 90 bp | GCTGAAGCCTTAAGATGGCCAGGAGTCCTCTGTCTGAAGGTTCCTTaGCACACAAACAGACAGGGGCAAGTTTGTGGGGGCCATGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: AEALRWPGVLCLKVP*HTNRQGQVCGGHEH Trigger: ATGCTCATGGCCCCCACAAACTTGCCCCTGTCTGTTTGTGTGTCAAGGAACCTTCAGACAGAGGACTCCTGGCCATCTTAAGGCTTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR TCA 90 bp | CAGTGTGCGTGGGTTCTGGGGAGGGAACTCAAATGCTCATGCTTGTaGCGGGCAAGCAGTATGGGACTGAGCTGTCTCTTTGTTCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: QCAWVLGRELKCSCL*RASSMGLSCLFVPC Trigger: ACAAGGAACAAAGAGACAGCTCAGTCCCATACTGCTTGCCCGTCACAAGCATGAGCATTTGAGTTCCCTCCCCAGAACCCACGCACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR TCA 90 bp | ACTGTGAGCCAGGCACTGGGTTGGCGGAACAAGCTTAGACTCTGTTaGCCAGGGTATAGTACGGATGTTGAATTTTCTTCCTATCACCAG | + |
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Preference number: 1 (lower is better) Translates to: TVSQALGWRNKLRLC*PGYSTDVEFSSYHQ Trigger: CTGGTGATAGGAAGAAAATTCAACATCCGTACTATACCCTGGTCAACAGAGTCTAAGCTTGTTCCGCCAACCCAGTGCCTGGCTCACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR TCA 90 bp | ACCCCTAATCTACTCTTCCAAATGCTGGTCTGGCTACCTCTCCAGTaGTGTACCCCAGACACTTGCTGTTTCTCCTTGGCATGGACTTTT | + |
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Preference number: 1 (lower is better) Translates to: TPNLLFQMLVWLPLQ*CTPDTCCFSLAWTF Trigger: AAAAGTCCATGCCAAGGAGAAACAGCAAGTGTCTGGGGTACATCACTGGAGAGGTAGCCAGACCAGCATTTGGAAGAGTAGATTAGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
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| 3UTR TCA 90 bp | ACACAGACTCTGTGGGTACTGTGGATCCCTACAGGCAGCACCATTTaGGGATTCACGTTTTCCTTAGTACATAACTCATCTTCCTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: TQTLWVLWIPTGSTI*GFTFSLVHNSSSSL Trigger: GAGGGAGGAAGATGAGTTATGTACTAAGGAAAACGTGAATCCTCAAATGGTGCTGCCTGTAGGGATCCACAGTACCCACAGAGTCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR TCA 90 bp | CCAACCATCTACACCAACAAGTATCTGTCCGCACCAAGGACCATTTaGACTCTGAGTGATGTCAGAGTCTGGCCTTCAACCTCATGTAAC | + |
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Preference number: 1 (lower is better) Translates to: PTIYTNKYLSAPRTI*TLSDVRVWPSTSCN Trigger: GTTACATGAGGTTGAAGGCCAGACTCTGACATCACTCAGAGTTCAAATGGTCCTTGGTGCGGACAGATACTTGTTGGTGTAGATGGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
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| 3UTR TCA 90 bp | TCTACACCAACAAGTATCTGTCCGCACCAAGGACCATTTGAACTCTaGGTGATGTCAGAGTCTGGCCTTCAACCTCATGTAACAACTTTC | + |
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Preference number: 1 (lower is better) Translates to: STPTSICPHQGPFEL*VMSESGLQPHVTTF Trigger: GAAAGTTGTTACATGAGGTTGAAGGCCAGACTCTGACATCACTCAGAGTTCAAATGGTCCTTGGTGCGGACAGATACTTGTTGGTGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
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| 3UTR TCA 90 bp | CAAACTGAAGGTCAATCTCTTAAGTTTTGTGATCTTATGACCCTATaGCAGCTAAACAACCCCAGACAGGGCTCTCAATGTCCTACTCTC | + |
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Preference number: 1 (lower is better) Translates to: QTEGQSLKFCDLMTL*QLNNPRQGSQCPTL Trigger: GAGAGTAGGACATTGAGAGCCCTGTCTGGGGTTGTTTAGCTGTCATAGGGTCATAAGATCACAAAACTTAAGAGATTGACCTTCAGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
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| 3UTR TCA 90 bp | CATTGTTTTTGCACAGTGAGAAGAAACTTAGAGCCATGCCCTGCTTaGTCTCCACAGCACTATCATGTAAGAATGAGAAAGGAAAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: HCFCTVRRNLEPCPA*SPQHYHVRMRKERN Trigger: GTTCCTTTCCTTTCTCATTCTTACATGATAGTGCTGTGGAGATCAAGCAGGGCATGGCTCTAAGTTTCTTCTCACTGTGCAAAAACAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR GCA 90 bp | AAATCATTGTTTTTGCACAGTGAGAAGAAACTTAGAGCCATGCCCTaGTTGATCTCCACAGCACTATCATGTAAGAATGAGAAAGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: KSLFLHSEKKLRAMP*LISTALSCKNEKGK Trigger: CTTTCCTTTCTCATTCTTACATGATAGTGCTGTGGAGATCAAGCAGGGCATGGCTCTAAGTTTCTTCTCACTGTGCAAAAACAATGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR CCA 90 bp | ACTCGTATTAAAAGCTCCCATATCCCCCTCAGGAATATTGTCTCTTaGGAACTTACTCATACATATATATATATATGCCGTAGCTTGTTC | + |
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Preference number: 1 (lower is better) Translates to: TRIKSSHIPLRNIVS*ELTHTYIYICRSLF Trigger: GAACAAGCTACGGCATATATATATATATGTATGAGTAAGTTCCCAAGAGACAATATTCCTGAGGGGGATATGGGAGCTTTTAATACGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCAAATGCTGGTCTGGCTACCTCTCCAGTGATGTACCCCAGACACTTGCTACTCTGATGCCCTGGTaGGTGAGGCTCTGTCGGCCA | + |
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Preference number: 2 (lower is better) Translates to: SSKCWSGYLSSDVPQTLATLMPW*VRLCRP Trigger: TGGCCGACAGAGCCTCACGCACCAGGGCATCAGAGT...AGCAAGTGTCTGGGGTACATCACTGGAGAGGTAGCCAGACCAGCATTTGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
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| 3UTR-3UTR GCA 90 bp | ACAACGACCAGACTGGAGGCAGAGAGAGGGATTCTAGTCTCACAGACTCAATGCGGGGGCCATGAGCATTaGAGGGCTAGGTGGCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: TTTRLEAERGILVSQTQCGGHEH*RARWLL Trigger: AAGAAGCCACCTAGCCCTGCAATGCTCATGGCCCCC...GCATTGAGTCTGTGAGACTAGAATCCCTCTCTCTGCCTCCAGTCTGGTCGTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTCTGGCTACCTCTCCAGTGATGTACCCCAGACACTTGCTGTTTCTCCTTGAGCCATGCCCTGCTTaGTCTCCACAGCACTATCAT | + |
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Preference number: 2 (lower is better) Translates to: AGLATSPVMYPRHLLFLLEPCPA*SPQHYH Trigger: ATGATAGTGCTGTGGAGATCAAGCAGGGCATGGCTC...AAGGAGAAACAGCAAGTGTCTGGGGTACATCACTGGAGAGGTAGCCAGACCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
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| 3UTR-3UTR GCA 90 bp | ACAACACAAACTAGACGACAACACAAACTAGTCAAGGACTGTTACTGTCACCTGGGAGAGCTGCAGGGCTaGAGGGCTGCACCAGGCGTC | + |
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Preference number: 2 (lower is better) Translates to: TTQTRRQHKLVKDCYCHLGELQG*RAAPGV Trigger: GACGCCTGGTGCAGCCCTGCAGCCCTGCAGCTCTCC...CAGGTGACAGTAACAGTCCTTGACTAGTTTGTGTTGTCGTCTAGTTTGTGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTCTGGCTACCTCTCCAGTGATGTACCCCAGACACTTGCTGTTTCTCCTTGGAAATGCTCATGCTTGTaGCGGGCAAGCAGTATGGGA | + |
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Preference number: 2 (lower is better) Translates to: WSGYLSSDVPQTLAVSPWKCSCL*RASSMG Trigger: TCCCATACTGCTTGCCCGTCACAAGCATGAGCATTT...CCAAGGAGAAACAGCAAGTGTCTGGGGTACATCACTGGAGAGGTAGCCAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
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| 3UTR-3UTR CCA 90 bp | TACTGGAAGTCACCAATTCAACTATGCAGGCTGAGGAGGAAGGCCCAGAGATGCTCACAACGACCAGACTaGAGGCAGAGAGAGGGATTC | + |
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Preference number: 2 (lower is better) Translates to: YWKSPIQLCRLRRKAQRCSQRPD*RQREGF Trigger: GAATCCCTCTCTCTGCCTCCAGTCTGGTCGTTGTGA...GCATCTCTGGGCCTTCCTCCTCAGCCTGCATAGTTGAATTGGTGACTTCCAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR TCA 90 bp | ACAACGACCAGACTGGAGGCAGAGAGAGGGATTCTAGTCTCACAGACTCAATGCCAGGAGTCCTCTGTCTaGAGGTTCCTTGACACACAA | + |
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Preference number: 2 (lower is better) Translates to: TTTRLEAERGILVSQTQCQESSV*RFLDTQ Trigger: TTGTGTGTCAAGGAACCTTCAGACAGAGGACTCCTG...GCATTGAGTCTGTGAGACTAGAATCCCTCTCTCTGCCTCCAGTCTGGTCGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCAGGTCACTCCAAAACTACCTATCTATAATCCCTCCAGTAATTGGTTGTACTCTGATGCCCTGGTaGGTGAGGCTCTGTCGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PPRSLQNYLSIIPPVIGCTLMPW*VRLCRP Trigger: TGGCCGACAGAGCCTCACGCACCAGGGCATCAGAGT...ACAACCAATTACTGGAGGGATTATAGATAGGTAGTTTTGGAGTGACCTGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR CCA 90 bp | CTATCCAACCCAACCATCTACACCAACAAGTATCTGTCCGCACCAAGGACCATTAGCCAGGCACTGGGTTaGCGGAACAAGCTTAGACTC | + |
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Preference number: 2 (lower is better) Translates to: LSNPTIYTNKYLSAPRTISQALG*RNKLRL Trigger: GAGTCTAAGCTTGTTCCGCCAACCCAGTGCCTGGCT...AATGGTCCTTGGTGCGGACAGATACTTGTTGGTGTAGATGGTTGGGTTGGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGATGAACTGTCAGACAGCGTTTCAAGCAGGAGGCTTTAGCATTGTGGATGAGCCATGCCCTGCTTaGTCTCCACAGCACTATCAT | + |
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Preference number: 2 (lower is better) Translates to: QQMNCQTAFQAGGFSIVDEPCPA*SPQHYH Trigger: ATGATAGTGCTGTGGAGATCAAGCAGGGCATGGCTC...ATCCACAATGCTAAAGCCTCCTGCTTGAAACGCTGTCTGACAGTTCATCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR TCA 90 bp | TACTGGAAGTCACCAATTCAACTATGCAGGCTGAGGAGGAAGGCCCAGAGATGCAAAACCCTGAATGAGTaGGCTATGCCAGGAAAACGG | + |
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Preference number: 2 (lower is better) Translates to: YWKSPIQLCRLRRKAQRCKTLNE*AMPGKR Trigger: CCGTTTTCCTGGCATAGCTCACTCATTCAGGGTTTT...GCATCTCTGGGCCTTCCTCCTCAGCCTGCATAGTTGAATTGGTGACTTCCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGACTAATGCTTGGAGTCTGACTTCGTTTCTCAATATATCTCCTTCCACCTCCCCTGCACTGGGATaGCAAGCATGTGCCACCACA | + |
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Preference number: 2 (lower is better) Translates to: AETNAWSLTSFLNISPSTSPALG*QACATT Trigger: TGTGGTGGCACATGCTTGTCATCCCAGTGCAGGGGA...GGTGGAAGGAGATATATTGAGAAACGAAGTCAGACTCCAAGCATTAGTCTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR GCA 90 bp | TTCACACTACACAGTGTGAAGTTACACTGTACTGTGAGCCAGGCACTGGGTTGGCTTAGAGCCATGCCCTaGTTGATCTCCACAGCACTA | + |
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Preference number: 2 (lower is better) Translates to: FTLHSVKLHCTVSQALGWLRAMP*LISTAL Trigger: TAGTGCTGTGGAGATCAAGCAGGGCATGGCTCTAAG...CCAACCCAGTGCCTGGCTCACAGTACAGTGTAACTTCACACTGTGTAGTGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGACTAATGCTTGGAGTCTGACTTCGTTTCTCAATATATCTCCTTCCACCGGGGGCCATGAGCATTaGAGGGCTAGGTGGCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: AETNAWSLTSFLNISPSTGGHEH*RARWLL Trigger: AAGAAGCCACCTAGCCCTGCAATGCTCATGGCCCCC...GGTGGAAGGAGATATATTGAGAAACGAAGTCAGACTCCAAGCATTAGTCTCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCAGGTCACTCCAAAACTACCTATCTATAATCCCTCCAGTAATTGGTTGTACTGTAGAGGTGAGGTaGAGGACCCCAGGATCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PPRSLQNYLSIIPPVIGCTVEVR*RTPGSS Trigger: GCTGGATCCTGGGGTCCTGCACCTCACCTCTACAGT...ACAACCAATTACTGGAGGGATTATAGATAGGTAGTTTTGGAGTGACCTGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR CCA 90 bp | CTATCCAACCCAACCATCTACACCAACAAGTATCTGTCCGCACCAAGGACCATTTCACAACGACCAGACTaGAGGCAGAGAGAGGGATTC | + |
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Preference number: 2 (lower is better) Translates to: LSNPTIYTNKYLSAPRTISQRPD*RQREGF Trigger: GAATCCCTCTCTCTGCCTCCAGTCTGGTCGTTGTGA...AATGGTCCTTGGTGCGGACAGATACTTGTTGGTGTAGATGGTTGGGTTGGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
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| 3UTR CAA 90 bp | TCAAGGGCTGGGATGACAGCCAGGATTTTCACCTTTACCTCCAGGTaGGCAGTGTTCCAGTGTAGAAGAGAGTGGAATAGCTCTAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SRAGMTARIFTFTSR*AVFQCRREWNSSKR Trigger: CCTTTTAGAGCTATTCCACTCTCTTCTACACTGGAACACTGCCAACCTGGAGGTAAAGGTGAAAATCCTGGCTGTCATCCCAGCCCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
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| 3UTR-3UTR TCA 90 bp | ACAACACAAACTAGACGACAACACAAACTAGTCAAGGACTGTTACTGTCACCTGGGCGTCAGGACTGAGTaGACTGTAGAGGTGAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: TTQTRRQHKLVKDCYCHLGVRTE*TVEVRC Trigger: GCACCTCACCTCTACAGTTCACTCAGTCCTGACGCC...CAGGTGACAGTAACAGTCCTTGACTAGTTTGTGTTGTCGTCTAGTTTGTGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR CAA 90 bp | ATTCCCCATGAGGTGCTGATGGAAGGCTCCCCTGTTCCTAACACCTaGGTCAGATTTCACACTACACAGTGTGAAGTTACACTGTACTGT | + |
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Preference number: 2 (lower is better) Translates to: IPHEVLMEGSPVPNT*VRFHTTQCEVTLYC Trigger: ACAGTACAGTGTAACTTCACACTGTGTAGTGTGAAATCTGACCAAGGTGTTAGGAACAGGGGAGCCTTCCATCAGCACCTCATGGGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGACTAATGCTTGGAGTCTGACTTCGTTTCTCAATATATCTCCTTCCACCTTCAACTATGCAGGCTaGGGAGGAAGGCCCAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: AETNAWSLTSFLNISPSTFNYAG*GGRPRD Trigger: ATCTCTGGGCCTTCCTCCTCAGCCTGCATAGTTGAA...GGTGGAAGGAGATATATTGAGAAACGAAGTCAGACTCCAAGCATTAGTCTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR GCA 90 bp | TACTGGAAGTCACCAATTCAACTATGCAGGCTGAGGAGGAAGGCCCAGAGATGCAGCTCACAGAATGGCTaGAAAACACTGAATGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: YWKSPIQLCRLRRKAQRCSSQNG*KTLNEL Trigger: CAACTCATTCAGTGTTTTGCAGCCATTCTGTGAGCT...GCATCTCTGGGCCTTCCTCCTCAGCCTGCATAGTTGAATTGGTGACTTCCAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGAAGGCTCCCCTGTTCCTAACACCTTGGTCAGATTTCACACTACACAGTGTCACCTGCATCATGGATaGTACCTGGCTGACATGTAT | + |
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Preference number: 2 (lower is better) Translates to: MEGSPVPNTLVRFHTTQCHLHHG*YLADMY Trigger: ATACATGTCAGCCAGGTACCATCCATGATGCAGGTG...ACACTGTGTAGTGTGAAATCTGACCAAGGTGTTAGGAACAGGGGAGCCTTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCAGGTCACTCCAAAACTACCTATCTATAATCCCTCCAGTAATTGGTTGTTGTCTGAAGGTTCCTTaGCACACAAACAGACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: PPRSLQNYLSIIPPVIGCCLKVP*HTNRQG Trigger: CCCCTGTCTGTTTGTGTGTCAAGGAACCTTCAGACA...ACAACCAATTACTGGAGGGATTATAGATAGGTAGTTTTGGAGTGACCTGGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGGGCTCTCAATGTCCTACTCTCAAGTAATAAAGCCCTTCCAAAAGGAAGTTGTACCCCAGACACTTaGTGTTTCTCCTTGGCATGG | + |
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Preference number: 2 (lower is better) Translates to: DRALNVLLSSNKALPKGSCTPDT*CFSLAW Trigger: CCATGCCAAGGAGAAACAGCAAGTGTCTGGGGTACA...ACTTCCTTTTGGAAGGGCTTTATTACTTGAGAGTAGGACATTGAGAGCCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
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| 3UTR-3UTR TCA 90 bp | ACAACGACCAGACTGGAGGCAGAGAGAGGGATTCTAGTCTCACAGACTCAATGCTCAGACCTAGTTCTCTaGTATAATTTGAGATGCACA | + |
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Preference number: 2 (lower is better) Translates to: TTTRLEAERGILVSQTQCSDLVL*YNLRCT Trigger: TGTGCATCTCAAATTATATCAGAGAACTAGGTCTGA...GCATTGAGTCTGTGAGACTAGAATCCCTCTCTCTGCCTCCAGTCTGGTCGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGACTAATGCTTGGAGTCTGACTTCGTTTCTCAATATATCTCCTTCCACCCACCTGCATCATGGATaGTACCTGGCTGACATGTAT | + |
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Preference number: 2 (lower is better) Translates to: AETNAWSLTSFLNISPSTHLHHG*YLADMY Trigger: ATACATGTCAGCCAGGTACCATCCATGATGCAGGTG...GGTGGAAGGAGATATATTGAGAAACGAAGTCAGACTCCAAGCATTAGTCTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR CCA 90 bp | GACAGGGCTCTCAATGTCCTACTCTCAAGTAATAAAGCCCTTCCAAAAGGAAGTTACTCTTCCAAATGCTaGTCTGGCTACCTCTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: DRALNVLLSSNKALPKGSYSSKC*SGYLSS Trigger: ACTGGAGAGGTAGCCAGACCAGCATTTGGAAGAGTA...ACTTCCTTTTGGAAGGGCTTTATTACTTGAGAGTAGGACATTGAGAGCCCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCTTAGACTCTGTTGACCAGGGTATAGTACGGATGTTGAATTTTCTTCCTTGTCTGAAGGTTCCTTaGCACACAAACAGACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: TSLDSVDQGIVRMLNFLPCLKVP*HTNRQG Trigger: CCCCTGTCTGTTTGTGTGTCAAGGAACCTTCAGACA...AGGAAGAAAATTCAACATCCGTACTATACCCTGGTCAACAGAGTCTAAGCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCTTAGACTCTGTTGACCAGGGTATAGTACGGATGTTGAATTTTCTTCCTCAGGAGTCCTCTGTCTaGAGGTTCCTTGACACACAA | + |
|
Preference number: 2 (lower is better) Translates to: TSLDSVDQGIVRMLNFLPQESSV*RFLDTQ Trigger: TTGTGTGTCAAGGAACCTTCAGACAGAGGACTCCTG...AGGAAGAAAATTCAACATCCGTACTATACCCTGGTCAACAGAGTCTAAGCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGGAGCCAAGTGCTGCTTGTAAAATGGAATCACTCAGGACAAATCATTGTTTTCTTAGAGCCATGCCCTaGTTGATCTCCACAGCACTA | + |
|
Preference number: 2 (lower is better) Translates to: REPSAACKMESLRTNHCFLRAMP*LISTAL Trigger: TAGTGCTGTGGAGATCAAGCAGGGCATGGCTCTAAG...AAAACAATGATTTGTCCTGAGTGATTCCATTTTACAAGCAGCACTTGGCTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGCAGATGAACTGTCAGACAGCGTTTCAAGCAGGAGGCTTTAGCATTGTGGATATCATGGATGGTACCTaGCTGACATGTATCTATGTT | + |
|
Preference number: 2 (lower is better) Translates to: QQMNCQTAFQAGGFSIVDIMDGT*LTCIYV Trigger: AACATAGATACATGTCAGCCAGGTACCATCCATGAT...ATCCACAATGCTAAAGCCTCCTGCTTGAAACGCTGTCTGACAGTTCATCTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR-3UTR CCA 90 bp | CTATCCAACCCAACCATCTACACCAACAAGTATCTGTCCGCACCAAGGACCATTATCATGGATGGTACCTaGCTGACATGTATCTATGTT | + |
|
Preference number: 2 (lower is better) Translates to: LSNPTIYTNKYLSAPRTIIMDGT*LTCIYV Trigger: AACATAGATACATGTCAGCCAGGTACCATCCATGAT...AATGGTCCTTGGTGCGGACAGATACTTGTTGGTGTAGATGGTTGGGTTGGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGCTTAGACTCTGTTGACCAGGGTATAGTACGGATGTTGAATTTTCTTCCTTGTCTCTGGCCAACCTaGGCTCTCTTTCTTCAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: TSLDSVDQGIVRMLNFLPCLWPT*ALFLQS Trigger: AGACTGAAGAAAGAGAGCCCAGGTTGGCCAGAGACA...AGGAAGAAAATTCAACATCCGTACTATACCCTGGTCAACAGAGTCTAAGCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR-3UTR CCA 90 bp | TACTGGAAGTCACCAATTCAACTATGCAGGCTGAGGAGGAAGGCCCAGAGATGCCAATGTCTTTGCCAATaGACTATTTACTCACTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: YWKSPIQLCRLRRKAQRCQCLCQ*TIYSLE Trigger: TTCTAGTGAGTAAATAGTCCATTGGCAAAGACATTG...GCATCTCTGGGCCTTCCTCCTCAGCCTGCATAGTTGAATTGGTGACTTCCAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR CAA 90 bp | AGATTTCTAGCTTCTAGATTAGAAGCCACTAAGATGGAGATAGCATaGTGGCAGGACTATCCAACCCAACCATCTACACCAACAAGTATC | + |
|
Preference number: 2 (lower is better) Translates to: RFLASRLEATKMEIA*WQDYPTQPSTPTSI Trigger: GATACTTGTTGGTGTAGATGGTTGGGTTGGATAGTCCTGCCACAATGCTATCTCCATCTTAGTGGCTTCTAATCTAGAAGCTAGAAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR CAA 90 bp | TCATTGTTTTTGCACAGTGAGAAGAAACTTAGAGCCATGCCCTGCTaGATCTCCACAGCACTATCATGTAAGAATGAGAAAGGAAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SLFLHSEKKLRAMPC*ISTALSCKNEKGKE Trigger: TTCCTTTCCTTTCTCATTCTTACATGATAGTGCTGTGGAGATCAAGCAGGGCATGGCTCTAAGTTTCTTCTCACTGTGCAAAAACAATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGATCTGTTCATCTTTCAAGGCAGCAATGAGCAATCAAATTCTCCCTCCCTGGCTAATGCTTGGAGTCTaGCTTCGTTTCTCAATATAT | + |
|
Preference number: 2 (lower is better) Translates to: MICSSFKAAMSNQILPPWLMLGV*LRFSIY Trigger: ATATATTGAGAAACGAAGTCAGACTCCAAGCATTAG...CCAGGGAGGGAGAATTTGATTGCTCATTGCTGCCTTGAAAGATGAACAGATCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR CAA 90 bp | GGCGGAACAAGCTTAGACTCTGTTGACCAGGGTATAGTACGGATGTaGAATTTTCTTCCTATCACCAGATATTTCATTTATTTGCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: GGTSLDSVDQGIVRM*NFLPITRYFIYLQK Trigger: TTTTTGCAAATAAATGAAATATCTGGTGATAGGAAGAAAATTCAACATCCGTACTATACCCTGGTCAACAGAGTCTAAGCTTGTTCCGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR CAA 90 bp | CCATTTTATGCTCCTGAGCATTCCTTACTCTATGTCATCCACCCTTaGAAGAAATTAATCCTCATTTATGATCCTAGTAATCTCAACTCC | + |
|
Preference number: 2 (lower is better) Translates to: PFYAPEHSLLYVIHP*KKLILIYDPSNLNS Trigger: GGAGTTGAGATTACTAGGATCATAAATGAGGATTAATTTCTTCAAAGGGTGGATGACATAGAGTAAGGAATGCTCAGGAGCATAAAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR CAA 90 bp | CCCAAAAATATAGCTACAAATAATATGAAATTACAAATCTATCAGTaGCCACCAGGATTCTCATCAGGACCCAGTTCAGCTCGAGAACTT | + |
|
Preference number: 2 (lower is better) Translates to: PKNIATNNMKLQIYQ*PPGFSSGPSSAREL Trigger: AAGTTCTCGAGCTGAACTGGGTCCTGATGAGAATCCTGGTGGCAACTGATAGATTTGTAATTTCATATTATTTGTAGCTATATTTTTGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR-3UTR GCA 90 bp | GACCAGGGTATAGTACGGATGTTGAATTTTCTTCCTATCACCAGATATTTCATTATGTTTAAATTAAGGTaGCCTGTCCTCCAATGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: DQGIVRMLNFLPITRYFIMFKLR*PVLQCL Trigger: CAGACATTGGAGGACAGGGCACCTTAATTTAAACAT...AATGAAATATCTGGTGATAGGAAGAAAATTCAACATCCGTACTATACCCTGGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR-3UTR CCA 90 bp | AACATATGTCACCTAACATTAAACGTAAACCTTTCATCAGTCTATGCTTACAGGATTAAAACAGAGCATTaGTGTCTTCATCACAAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: NICHLTLNVNLSSVYAYRIKTEH*CLHHKS Trigger: AGACTTGTGATGAAGACACCAATGCTCTGTTTTAAT...CCTGTAAGCATAGACTGATGAAAGGTTTACGTTTAATGTTAGGTGACATATGTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
||
| 3UTR TCA 72 bp | AGATGCACTTCTCTCTGTGTGTCCCCTGCACTGGGATaGCAAGCATGTGCCACCACAGTGTGCGTGGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RCTSLCVSPALG*QACATTVCVGS Trigger: AGAACCCACGCACACTGTGGTGGCACATGCTTGTCATCCCAGTGCAGGGGACACACAGAGAGAAGTGCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR TCA 72 bp | TTAAGATGGCCAGGAGTCCTCTGTCTGAAGGTTCCTTaGCACACAAACAGACAGGGGCAAGTTTGTGGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LRWPGVLCLKVP*HTNRQGQVCGG Trigger: GCCCCCACAAACTTGCCCCTGTCTGTTTGTGTGTCAAGGAACCTTCAGACAGAGGACTCCTGGCCATCTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR GCA 72 bp | GAGGCAGAGAGAGGGATTCTAGTCTCACAGACTCAATaGAGGTGGTTAGAGGAGCTGGTAAGGAAGCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: EAERGILVSQTQ*RWLEELVRKPV Trigger: CACTGGCTTCCTTACCAGCTCCTCTAACCACCTGCATTGAGTCTGTGAGACTAGAATCCCTCTCTCTGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR CCA 72 bp | GAGAGAGGGATTCTAGTCTCACAGACTCAATGCAGGTaGTTAGAGGAGCTGGTAAGGAAGCCAGTGGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ERGILVSQTQCR*LEELVRKPVES Trigger: GCTCTCCACTGGCTTCCTTACCAGCTCCTCTAACCACCTGCATTGAGTCTGTGAGACTAGAATCCCTCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTAGAGTTCACAACGACCAGACTGGAGGCAGAGAGAGGGATTCTAGTCTCACCTCCAATGTCTGCATaGCACTCAGAAGGGAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SVEFTTTRLEAERGILVSPPMSA*HSEGSQ Trigger: TTGGCTCCCTTCTGAGTGCAATGCAGACATTGGAGG...TGAGACTAGAATCCCTCTCTCTGCCTCCAGTCTGGTCGTTGTGAACTCTACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR TCA 72 bp | CTACTCTTCCAAATGCTGGTCTGGCTACCTCTCCAGTaGTGTACCCCAGACACTTGCTGTTTCTCCTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLFQMLVWLPLQ*CTPDTCCFSLA Trigger: TGCCAAGGAGAAACAGCAAGTGTCTGGGGTACATCACTGGAGAGGTAGCCAGACCAGCATTTGGAAGAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR CCA 72 bp | TCCAGTGATGTACCCCAGACACTTGCTGTTTCTCCTTaGCATGGACTTTTGTCCCTCTCACCTCTCTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSDVPQTLAVSP*HGLLSLSPLSS Trigger: AGAGGAGAGAGGTGAGAGGGACAAAAGTCCATGCCAAGGAGAAACAGCAAGTGTCTGGGGTACATCACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR TCA 72 bp | GTCTATACTGGAAGTCACCAATTCAACTATGCAGGCTaGGGAGGAAGGCCCAGAGATGCACTTCTCTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VYTGSHQFNYAG*GGRPRDALLSV Trigger: CACAGAGAGAAGTGCATCTCTGGGCCTTCCTCCTCAGCCTGCATAGTTGAATTGGTGACTTCCAGTATAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR TCA 72 bp | CAGGCACTGGGTTGGCGGAACAAGCTTAGACTCTGTTaGCCAGGGTATAGTACGGATGTTGAATTTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QALGWRNKLRLC*PGYSTDVEFSS Trigger: GGAAGAAAATTCAACATCCGTACTATACCCTGGTCAACAGAGTCTAAGCTTGTTCCGCCAACCCAGTGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR TCA 72 bp | TACACCAACAAGTATCTGTCCGCACCAAGGACCATTTaGACTCTGAGTGATGTCAGAGTCTGGCCTTCAACC | + |
|
Preference number: 3 (lower is better) Translates to: YTNKYLSAPRTI*TLSDVRVWPST Trigger: GGTTGAAGGCCAGACTCTGACATCACTCAGAGTTCAAATGGTCCTTGGTGCGGACAGATACTTGTTGGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR-3UTR CAA 90 bp | GACAGGGCTCTCAATGTCCTACTCTCAAGTAATAAAGCCCTTCCAAAAGGAAGTCCTCCAATGTCTGCATaGCACTCAGAAGGGAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: DRALNVLLSSNKALPKGSPPMSA*HSEGSQ Trigger: TTGGCTCCCTTCTGAGTGCAATGCAGACATTGGAGG...ACTTCCTTTTGGAAGGGCTTTATTACTTGAGAGTAGGACATTGAGAGCCCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCTGGCTACCTCTCCAGTGATGTACCCCAGACACTTGCTGTTTCTCCTTGGGGTATAGTACGGATGTaGAATTTTCTTCCTATCACC | + |
|
Preference number: 3 (lower is better) Translates to: WSGYLSSDVPQTLAVSPWGIVRM*NFLPIT Trigger: GGTGATAGGAAGAAAATTCAACATCCGTACTATACC...CCAAGGAGAAACAGCAAGTGTCTGGGGTACATCACTGGAGAGGTAGCCAGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCACACTACACAGTGTGAAGTTACACTGTACTGTGAGCCAGGCACTGGGTTGGGACTTCAAATCTATTTaGATAAGTGCATGGGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: FTLHSVKLHCTVSQALGWDFKSI*ISAWEA Trigger: TGCCTCCCATGCACTTATCAAAATAGATTTGAAGTC...CCAACCCAGTGCCTGGCTCACAGTACAGTGTAACTTCACACTGTGTAGTGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR-3UTR CAA 90 bp | CTATCCAACCCAACCATCTACACCAACAAGTATCTGTCCGCACCAAGGACCATTCCTCAACACCAGTGTTaGAACAATGGTTCTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSNPTIYTNKYLSAPRTIPQHQC*NNGSSK Trigger: TTTGGAAGAACCATTGTTCAAACACTGGTGTTGAGG...AATGGTCCTTGGTGCGGACAGATACTTGTTGGTGTAGATGGTTGGGTTGGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR CCA 72 bp | ACTATTGTCATACTTCCTGCCTGTCCTCAAACCTCCTaGTGGGTTAAAGTTTCCCACTTTAACCACTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TIVILPACPQTS*WVKVSHFNHCA Trigger: AGCACAGTGGTTAAAGTGGGAAACTTTAACCCACCAGGAGGTTTGAGGACAGGCAGGAAGTATGACAATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAAGGCTCCCCTGTTCCTAACACCTTGGTCAGATTTCACACTACACAGTGTAAAACACTGAATGAGTaGTCAGTAGAGTTCACAACG | + |
|
Preference number: 3 (lower is better) Translates to: MEGSPVPNTLVRFHTTQCKTLNE*SVEFTT Trigger: CGTTGTGAACTCTACTGACAACTCATTCAGTGTTTT...ACACTGTGTAGTGTGAAATCTGACCAAGGTGTTAGGAACAGGGGAGCCTTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR TCA 72 bp | TCATTTCACAGAGAAATTCCCTTGTCCAGAAGATGGTaGGTGGAGGAAAACCAAAGACAAGGGGCCTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SFHREIPLSRRW*VEENQRQGACK Trigger: TTTACAGGCCCCTTGTCTTTGGTTTTCCTCCACTCACCATCTTCTGGACAAGGGAATTTCTCTGTGAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR GCA 72 bp | CATTATGGGTCACTGAATGTGACATTTCTATGCTTATaGCACATGCCTGGTAGTTCCTGGCATGACAACACA | + |
|
Preference number: 3 (lower is better) Translates to: HYGSLNVTFLCL*HMPGSSWHDNT Trigger: TGTGTTGTCATGCCAGGAACTACCAGGCATGTGGCATAAGCATAGAAATGTCACATTCAGTGACCCATAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR CCA 72 bp | TCTAGATTAGAAGCCACTAAGATGGAGATAGCATTGTaGCAGGACTATCCAACCCAACCATCTACACCAACA | + |
|
Preference number: 3 (lower is better) Translates to: SRLEATKMEIAL*QDYPTQPSTPT Trigger: TGTTGGTGTAGATGGTTGGGTTGGATAGTCCTGCCACAATGCTATCTCCATCTTAGTGGCTTCTAATCTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR GCA 72 bp | TTTTTGCACAGTGAGAAGAAACTTAGAGCCATGCCCTaGTTGATCTCCACAGCACTATCATGTAAGAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: FLHSEKKLRAMP*LISTALSCKNE Trigger: CTCATTCTTACATGATAGTGCTGTGGAGATCAAGCAGGGCATGGCTCTAAGTTTCTTCTCACTGTGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR GCA 72 bp | AGCACATTAAGTTTATCTTTAATTTCTTCATCAGGATaGAGGACCATGGGAGATGTCTCAGCTCCTGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: STLSLSLISSSG*RTMGDVSAPVR Trigger: CCTGACAGGAGCTGAGACATCTCCCATGGTCCTGCATCCTGATGAAGAAATTAAAGATAAACTTAATGTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCAGGTCACTCCAAAACTACCTATCTATAATCCCTCCAGTAATTGGTTGTAAAACACTGAATGAGTaGTCAGTAGAGTTCACAACG | + |
|
Preference number: 3 (lower is better) Translates to: PPRSLQNYLSIIPPVIGCKTLNE*SVEFTT Trigger: CGTTGTGAACTCTACTGACAACTCATTCAGTGTTTT...ACAACCAATTACTGGAGGGATTATAGATAGGTAGTTTTGGAGTGACCTGGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCAGGTCACTCCAAAACTACCTATCTATAATCCCTCCAGTAATTGGTTGTGGTATAGTACGGATGTaGAATTTTCTTCCTATCACC | + |
|
Preference number: 3 (lower is better) Translates to: PPRSLQNYLSIIPPVIGCGIVRM*NFLPIT Trigger: GGTGATAGGAAGAAAATTCAACATCCGTACTATACC...ACAACCAATTACTGGAGGGATTATAGATAGGTAGTTTTGGAGTGACCTGGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCAGGTCACTCCAAAACTACCTATCTATAATCCCTCCAGTAATTGGTTGTCTGTCTCTTTGTTCCTaGTTCCTCACTAAAAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PPRSLQNYLSIIPPVIGCLSLCS*FLTKRF Trigger: AAACCTTTTAGTGAGGAACAAGGAACAAAGAGACAG...ACAACCAATTACTGGAGGGATTATAGATAGGTAGTTTTGGAGTGACCTGGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR TCA 72 bp | GAAGCCTGTGGTCTTTTCCTCCACACCAACCTCTTATaGGATGCAGAAAGTCTTATGTCTCAGTATATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: EACGLFLHTNLL*DAESLMSQYMN Trigger: ATTCATATACTGAGACATAAGACTTTCTGCATCTCATAAGAGGTTGGTGTGGAGGAAAAGACCACAGGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCAGGTCACTCCAAAACTACCTATCTATAATCCCTCCAGTAATTGGTTGTGACTACACATTATCTTaGGATATCACTCCTCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PPRSLQNYLSIIPPVIGCDYTLS*DITPQN Trigger: ATTCTGAGGAGTGATATCCAAAGATAATGTGTAGTC...ACAACCAATTACTGGAGGGATTATAGATAGGTAGTTTTGGAGTGACCTGGGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATGCACATGTGTTCATGACTTCAAATCTATTTTGATAAGTGCATGGGAGGCAACTCAGGACAAATCATaGTTTTTGCACAGTGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RCTCVHDFKSILISAWEATQDKS*FLHSEK Trigger: CTTCTCACTGTGCAAAAACAATGATTTGTCCTGAGT...TGCCTCCCATGCACTTATCAAAATAGATTTGAAGTCATGAACACATGTGCATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR CCA 72 bp | GAATTTGATTTGGCCACATACATATGTATCCTGGGCTaGTCACTCATGAAGGTATGTAGAAGATTAAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: EFDLATYICILG*SLMKVCRRLKP Trigger: TGGTTTTAATCTTCTACATACCTTCATGAGTGACCAGCCCAGGATACATATGTATGTGGCCAAATCAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCAGGGTATAGTACGGATGTTGAATTTTCTTCCTATCACCAGATATTTCATTGACTTCAAATCTATTTaGATAAGTGCATGGGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DQGIVRMLNFLPITRYFIDFKSI*ISAWEA Trigger: TGCCTCCCATGCACTTATCAAAATAGATTTGAAGTC...AATGAAATATCTGGTGATAGGAAGAAAATTCAACATCCGTACTATACCCTGGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR TCA 72 bp | TCTTATGAGATGCAGAAAGTCTTATGTCTCAGTATATaGATGAAGGAGATGCTCAAGGCTTTCACTGAATAC | + |
|
Preference number: 3 (lower is better) Translates to: SYEMQKVLCLSI*MKEMLKAFTEY Trigger: GTATTCAGTGAAAGCCTTGAGCATCTCCTTCATTCATATACTGAGACATAAGACTTTCTGCATCTCATAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR GCA 72 bp | ACACAGTTATTATATGTACTTAGCTCACAGAATGGCTaGAAAACACTGAATGAGTTGTCAGTAGAGTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: TQLLYVLSSQNG*KTLNELSVEFT Trigger: TGTGAACTCTACTGACAACTCATTCAGTGTTTTGCAGCCATTCTGTGAGCTAAGTACATATAATAACTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR CCA 72 bp | AAAAGCTCCCATATCCCCCTCAGGAATATTGTCTCTTaGGAACTTACTCATACATATATATATATATGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: KSSHIPLRNIVS*ELTHTYIYICR Trigger: ACGGCATATATATATATATGTATGAGTAAGTTCCCAAGAGACAATATTCCTGAGGGGGATATGGGAGCTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR CCA 72 bp | TGTAGAAGATTAAAACCACCCTTTGTTCTTCACGTCTaGTGTAACTTACTCTCTGAGTTTTCAATAGGTACT | + |
|
Preference number: 3 (lower is better) Translates to: CRRLKPPFVLHV*CNLLSEFSIGT Trigger: AGTACCTATTGAAAACTCAGAGAGTAAGTTACACCAGACGTGAAGAACAAAGGGTGGTTTTAATCTTCTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR CCA 72 bp | TATATATGCCGTAGCTTGTTCATATACTCGTTCATATaGAGACTACACATTATCTTTGGATATCACTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: YICRSLFIYSFI*RLHIIFGYHSS Trigger: TGAGGAGTGATATCCAAAGATAATGTGTAGTCTCCATATGAACGAGTATATGAACAAGCTACGGCATATATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR CCA 72 bp | CATATACTCGTTCATATGGAGACTACACATTATCTTTaGATATCACTCCTCAGAATGTCAAGTACATTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: HILVHMETTHYL*ISLLRMSSTLY Trigger: ATACAATGTACTTGACATTCTGAGGAGTGATATCCAAAGATAATGTGTAGTCTCCATATGAACGAGTATATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGTCTGGCTACCTCTCCAGTGATGTACCCCAGACACTTGCTGTTTCTCCTTCCTCAGCCTGCAGAGTaGGGGGCTCTTCTATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGLATSPVMYPRHLLFLLPQPAE*GALLSL Trigger: CAAGGATAGAAGAGCCCCTCACTCTGCAGGCTGAGG...AAGGAGAAACAGCAAGTGTCTGGGGTACATCACTGGAGAGGTAGCCAGACCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCTGGCTACCTCTCCAGTGATGTACCCCAGACACTTGCTGTTTCTCCTTGGCAAGAGAGGTGGTGGTaGGGACTGCAGGCCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: WSGYLSSDVPQTLAVSPWQERWW*GLQANL Trigger: AAGATTGGCCTGCAGTCCTCACCACCACCTCTCTTG...CCAAGGAGAAACAGCAAGTGTCTGGGGTACATCACTGGAGAGGTAGCCAGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| CDS-3UTR GCA 90 bp | TTCACACTACACAGTGTGAAGTTACACTGTACTGTGAGCCAGGCACTGGGTTGGCCACACACCTCAGCCTaGAGAGTGAGGGGCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FTLHSVKLHCTVSQALGWPHTSA*RVRGFP Trigger: CGGAAAGCCCCTCACTCTGCAGGCTGAGGTGTGTGG...CCAACCCAGTGCCTGGCTCACAGTACAGTGTAACTTCACACTGTGTAGTGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177585.9 |
||
| CDS-3UTR TCA 90 bp | TGGTCTGGCTACCTCTCCAGTGATGTACCCCAGACACTTGCTGTTTCTCCTTGGCAACAGAGGTGGTGCTaGGGACTGCAGATCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: WSGYLSSDVPQTLAVSPWQQRWC*GLQINL Trigger: CAGATTGATCTGCAGTCCTCAGCACCACCTCTGTTG...CCAAGGAGAAACAGCAAGTGTCTGGGGTACATCACTGGAGAGGTAGCCAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAGATGAACTGTCAGACAGCGTTTCAAGCAGGAGGCTTTAGCATTGTGGATCAACAGAGGTGGTGCTaGGGACTGCAGATCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QQMNCQTAFQAGGFSIVDQQRWC*GLQINL Trigger: CAGATTGATCTGCAGTCCTCAGCACCACCTCTGTTG...ATCCACAATGCTAAAGCCTCCTGCTTGAAACGCTGTCTGACAGTTCATCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR CAA 72 bp | GGGATGACAGCCAGGATTTTCACCTTTACCTCCAGGTaGGCAGTGTTCCAGTGTAGAAGAGAGTGGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: GMTARIFTFTSR*AVFQCRREWNS Trigger: GCTATTCCACTCTCTTCTACACTGGAACACTGCCAACCTGGAGGTAAAGGTGAAAATCCTGGCTGTCATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR CAA 72 bp | GAGGTGCTGATGGAAGGCTCCCCTGTTCCTAACACCTaGGTCAGATTTCACACTACACAGTGTGAAGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: EVLMEGSPVPNT*VRFHTTQCEVT Trigger: TGTAACTTCACACTGTGTAGTGTGAAATCTGACCAAGGTGTTAGGAACAGGGGAGCCTTCCATCAGCACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTCACAACGACCAGACTGGAGGCAGAGAGAGGGATTCTAGTCTCACAGACTAACAGCACAGAATTCTaGGATGCTGTCGGAAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: EFTTTRLEAERGILVSQTNSTEF*DAVGNS Trigger: TGAATTTCCGACAGCATCTCAGAATTCTGTGCTGTT...AGTCTGTGAGACTAGAATCCCTCTCTCTGCCTCCAGTCTGGTCGTTGTGAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCCAAGTGCTGCTTGTAAAATGGAATCACTCAGGACAAATCATTGTTTTCAAGAGAGGTGGTGGTaGGGACTGCAGGCCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: REPSAACKMESLRTNHCFQERWW*GLQANL Trigger: AAGATTGGCCTGCAGTCCTCACCACCACCTCTCTTG...AAAACAATGATTTGTCCTGAGTGATTCCATTTTACAAGCAGCACTTGGCTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS-3UTR TCA 90 bp | GTTGTCAGTAGAGTTCACAACGACCAGACTGGAGGCAGAGAGAGGGATTCTAGTCGAGGACAGAGACATTaGATCATAGTTCCACATACA | + |
|
Preference number: 4 (lower is better) Translates to: VVSRVHNDQTGGRERDSSRGQRH*IIVPHT Trigger: TGTATGTGGAACTATGATTCAATGTCTCTGTCCTCG...ACTAGAATCCCTCTCTCTGCCTCCAGTCTGGTCGTTGTGAACTCTACTGACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS-3UTR TCA 90 bp | TTCACACTACACAGTGTGAAGTTACACTGTACTGTGAGCCAGGCACTGGGTTGGAACAGCACAGAATTCTaGGATGCTGTCGGAAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: FTLHSVKLHCTVSQALGWNSTEF*DAVGNS Trigger: TGAATTTCCGACAGCATCTCAGAATTCTGTGCTGTT...CCAACCCAGTGCCTGGCTCACAGTACAGTGTAACTTCACACTGTGTAGTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS-3UTR GCA 90 bp | GTTGTCAGTAGAGTTCACAACGACCAGACTGGAGGCAGAGAGAGGGATTCTAGTGACTGCAGATCAATCTaGATAAACACAGGTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVSRVHNDQTGGRERDSSDCRSI*INTGDF Trigger: GAAGTCACCTGTGTTTATGCAGATTGATCTGCAGTC...ACTAGAATCCCTCTCTCTGCCTCCAGTCTGGTCGTTGTGAACTCTACTGACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS-3UTR GCA 90 bp | AGATGCACATGTGTTCATGACTTCAAATCTATTTTGATAAGTGCATGGGAGGCACCACACACCTCAGCCTaGAGAGTGAGGGGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RCTCVHDFKSILISAWEAPHTSA*RVRGSS Trigger: AGAAGAGCCCCTCACTCTGCAGGCTGAGGTGTGTGG...TGCCTCCCATGCACTTATCAAAATAGATTTGAAGTCATGAACACATGTGCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| CDS-3UTR TCA 90 bp | TCAGTAGAGTTCACAACGACCAGACTGGAGGCAGAGAGAGGGATTCTAGTCTCAGAAGCAGCAGACCTTTaGAAATGTCAATTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVEFTTTRLEAERGILVSEAADL*KCQFHL Trigger: AAGATGGAATTGACATTTTCAAAGGTCTGCTGCTTC...TGAGACTAGAATCCCTCTCTCTGCCTCCAGTCTGGTCGTTGTGAACTCTACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177585.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCCAGGTCACTCCAAAACTACCTATCTATAATCCCTCCAGTAATTGGTTGTGTCTCCTGCACTATGTaGAGCAGCAGACCTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PPRSLQNYLSIIPPVIGCVSCTM*SSRPLK Trigger: TTTCAAAGGTCTGCTGCTTCACATAGTGCAGGAGAC...ACAACCAATTACTGGAGGGATTATAGATAGGTAGTTTTGGAGTGACCTGGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177585.9 |
||
| CDS-3UTR TCA 90 bp | AACATATGTCACCTAACATTAAACGTAAACCTTTCATCAGTCTATGCTTACAGGCCTCAGCCTGCAGAGTaGGGGGCTTTCCGGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NICHLTLNVNLSSVYAYRPQPAE*GAFRLC Trigger: ACACAACCGGAAAGCCCCTCACTCTGCAGGCTGAGG...CCTGTAAGCATAGACTGATGAAAGGTTTACGTTTAATGTTAGGTGACATATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
||
| CDS-3UTR GCA 90 bp | AACATATGTCACCTAACATTAAACGTAAACCTTTCATCAGTCTATGCTTACAGGCCACACACCTCAGCCTaGAGAGTGAGGGGCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NICHLTLNVNLSSVYAYRPHTSA*RVRGFP Trigger: CGGAAAGCCCCTCACTCTGCAGGCTGAGGTGTGTGG...CCTGTAAGCATAGACTGATGAAAGGTTTACGTTTAATGTTAGGTGACATATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
||
| 3UTR CAA 72 bp | GCTTCTAGATTAGAAGCCACTAAGATGGAGATAGCATaGTGGCAGGACTATCCAACCCAACCATCTACACCA | + |
|
Preference number: 4 (lower is better) Translates to: ASRLEATKMEIA*WQDYPTQPSTP Trigger: TGGTGTAGATGGTTGGGTTGGATAGTCCTGCCACAATGCTATCTCCATCTTAGTGGCTTCTAATCTAGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCCAGGTCACTCCAAAACTACCTATCTATAATCCCTCCAGTAATTGGTTGTAGTCTCTTCTATCCTTaGACACAGACAGACAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: PPRSLQNYLSIIPPVIGCSLFYP*TQTDRQ Trigger: CTGTCTGTCTGTCTGTGTCCAAGGATAGAAGAGACT...ACAACCAATTACTGGAGGGATTATAGATAGGTAGTTTTGGAGTGACCTGGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177585.9 |
||
| CDS-3UTR TCA 90 bp | AACATATGTCACCTAACATTAAACGTAAACCTTTCATCAGTCTATGCTTACAGGCAAGAGAGGTGGTGGTaGGGACTGCAGGCCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NICHLTLNVNLSSVYAYRQERWW*GLQANL Trigger: AAGATTGGCCTGCAGTCCTCACCACCACCTCTCTTG...CCTGTAAGCATAGACTGATGAAAGGTTTACGTTTAATGTTAGGTGACATATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
||
| 3UTR CAA 72 bp | GGCAAGCAGTATGGGACTGAGCTGTCTCTTTGTTCCTaGTTCCTCACTAAAAGGTTTATATCATTATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKQYGTELSLCS*FLTKRFISLWV Trigger: GACCCATAATGATATAAACCTTTTAGTGAGGAACAAGGAACAAAGAGACAGCTCAGTCCCATACTGCTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS-3UTR GCA 90 bp | GACAGGGCTCTCAATGTCCTACTCTCAAGTAATAAAGCCCTTCCAAAAGGAAGTCACAGAATTCTGAGATaGTGTCGGAAATTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DRALNVLLSSNKALPKGSHRILR*CRKFIF Trigger: GAAGATGAATTTCCGACAGCATCTCAGAATTCTGTG...ACTTCCTTTTGGAAGGGCTTTATTACTTGAGAGTAGGACATTGAGAGCCCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCCAAGTGCTGCTTGTAAAATGGAATCACTCAGGACAAATCATTGTTTTCGAGGACAGAGACATTaGATCATAGTTCCACATACA | + |
|
Preference number: 4 (lower is better) Translates to: REPSAACKMESLRTNHCFRGQRH*IIVPHT Trigger: TGTATGTGGAACTATGATTCAATGTCTCTGTCCTCG...AAAACAATGATTTGTCCTGAGTGATTCCATTTTACAAGCAGCACTTGGCTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCCAAGTGCTGCTTGTAAAATGGAATCACTCAGGACAAATCATTGTTTTGACTGCAGATCAATCTaGATAAACACAGGTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: REPSAACKMESLRTNHCFDCRSI*INTGDF Trigger: GAAGTCACCTGTGTTTATGCAGATTGATCTGCAGTC...AAAACAATGATTTGTCCTGAGTGATTCCATTTTACAAGCAGCACTTGGCTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS-3UTR GCA 90 bp | GACCAGGGTATAGTACGGATGTTGAATTTTCTTCCTATCACCAGATATTTCATTGGTGGTGCTGAGGACTaGAGATCAATCTGCATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DQGIVRMLNFLPITRYFIGGAED*RSICIN Trigger: GTTTATGCAGATTGATCTGCAGTCCTCAGCACCACC...AATGAAATATCTGGTGATAGGAAGAAAATTCAACATCCGTACTATACCCTGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS-3UTR TCA 90 bp | AACATATGTCACCTAACATTAAACGTAAACCTTTCATCAGTCTATGCTTACAGGGTCTCCTGCACTATGTaGAGCAGCAGACCTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NICHLTLNVNLSSVYAYRVSCTM*SSRPLK Trigger: TTTCAAAGGTCTGCTGCTTCACATAGTGCAGGAGAC...CCTGTAAGCATAGACTGATGAAAGGTTTACGTTTAATGTTAGGTGACATATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
||
| CDS-3UTR TCA 90 bp | AACATATGTCACCTAACATTAAACGTAAACCTTTCATCAGTCTATGCTTACAGGGGCAAAACCTATCAATaGCAGCAGTGGGCTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NICHLTLNVNLSSVYAYRGKTYQ*QQWALK Trigger: TTTGAGAGCCCACTGCTGTCATTGATAGGTTTTGCC...CCTGTAAGCATAGACTGATGAAAGGTTTACGTTTAATGTTAGGTGACATATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCCAAGTGCTGCTTGTAAAATGGAATCACTCAGGACAAATCATTGTTTTCACAGAATTCTGAGATaGTGTCGGAAATTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: REPSAACKMESLRTNHCFHRILR*CRKFIF Trigger: GAAGATGAATTTCCGACAGCATCTCAGAATTCTGTG...AAAACAATGATTTGTCCTGAGTGATTCCATTTTACAAGCAGCACTTGGCTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS-3UTR CCA 90 bp | AACATATGTCACCTAACATTAAACGTAAACCTTTCATCAGTCTATGCTTACAGGAGTCTCTTCTATCCTTaGACACAGACAGACAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: NICHLTLNVNLSSVYAYRSLFYP*TQTDRQ Trigger: CTGTCTGTCTGTCTGTGTCCAAGGATAGAAGAGACT...CCTGTAAGCATAGACTGATGAAAGGTTTACGTTTAATGTTAGGTGACATATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
||
| CDS-3UTR TCA 90 bp | AACATATGTCACCTAACATTAAACGTAAACCTTTCATCAGTCTATGCTTACAGGCGAGGACAGAGACATTaGATCATAGTTCCACATACA | + |
|
Preference number: 4 (lower is better) Translates to: NICHLTLNVNLSSVYAYRRGQRH*IIVPHT Trigger: TGTATGTGGAACTATGATTCAATGTCTCTGTCCTCG...CCTGTAAGCATAGACTGATGAAAGGTTTACGTTTAATGTTAGGTGACATATGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
||
| CDS-3UTR TCA 90 bp | AACATATGTCACCTAACATTAAACGTAAACCTTTCATCAGTCTATGCTTACAGGGAAGCAGCAGACCTTTaGAAATGTCAATTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NICHLTLNVNLSSVYAYREAADL*KCQFHL Trigger: AAGATGGAATTGACATTTTCAAAGGTCTGCTGCTTC...CCTGTAAGCATAGACTGATGAAAGGTTTACGTTTAATGTTAGGTGACATATGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
||
| 3UTR CAA 72 bp | AGCTTAGACTCTGTTGACCAGGGTATAGTACGGATGTaGAATTTTCTTCCTATCACCAGATATTTCATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLDSVDQGIVRM*NFLPITRYFIY Trigger: ATAAATGAAATATCTGGTGATAGGAAGAAAATTCAACATCCGTACTATACCCTGGTCAACAGAGTCTAAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR CAA 72 bp | CTCGTATTAAAAGCTCCCATATCCCCCTCAGGAATATaGTCTCTTGGGAACTTACTCATACATATATATATA | + |
|
Preference number: 4 (lower is better) Translates to: LVLKAPISPSGI*SLGNLLIHIYI Trigger: TATATATATATGTATGAGTAAGTTCCCAAGAGACAATATTCCTGAGGGGGATATGGGAGCTTTTAATACGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| 3UTR CAA 72 bp | AAACTGCCTTATAATATTTTATGGAAGACACTGAATTaGATTTGGCCACATACATATGTATCCTGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLPYNILWKTLN*IWPHTYVSWAG Trigger: ACCAGCCCAGGATACATATGTATGTGGCCAAATCAAATTCAGTGTCTTCCATAAAATATTATAAGGCAGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| 3UTR CAA 72 bp | TCATATACTCGTTCATATGGAGACTACACATTATCTTaGGATATCACTCCTCAGAATGTCAAGTACATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SYTRSYGDYTLS*DITPQNVKYIV Trigger: TACAATGTACTTGACATTCTGAGGAGTGATATCCAAAGATAATGTGTAGTCTCCATATGAACGAGTATATGA 35% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS-3UTR CCA 90 bp | AACATATGTCACCTAACATTAAACGTAAACCTTTCATCAGTCTATGCTTACAGGACTCTAGACTGTATTTaGCAAAACCTATCAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: NICHLTLNVNLSSVYAYRTLDCI*QNLSMT Trigger: TGTCATTGATAGGTTTTGCCAAATACAGTCTAGAGT...CCTGTAAGCATAGACTGATGAAAGGTTTACGTTTAATGTTAGGTGACATATGTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
||
| CDS CCA 90 bp | CTGGCCACACACCTCAGCCTGCAGAGTGAGGGGCTCTTCTATCCTTaGACACAGACAGACAGACAGCAGGCACAGCAGGGACAAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LATHLSLQSEGLFYP*TQTDRQQAQQGQAA Trigger: TGCTGCTTGTCCCTGCTGTGCCTGCTGTCTGTCTGTCTGTGTCCAAGGATAGAAGAGCCCCTCACTCTGCAGGCTGAGGTGTGTGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| CDS-3UTR CAA 90 bp | ACAACGACCAGACTGGAGGCAGAGAGAGGGATTCTAGTCTCACAGACTCAATGCCAGCAGGAAAGGACCTaGTTACTGGCAGTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TTTRLEAERGILVSQTQCQQERT*LLAVSS Trigger: GGAGCTGACTGCCAGTAACAAGGTCCTTTCCTGCTG...GCATTGAGTCTGTGAGACTAGAATCCCTCTCTCTGCCTCCAGTCTGGTCGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS GCA 90 bp | CCTGTGAAATGTTTGTCTACTTCATACTGGCCACACACCTCAGCCTaGAGAGTGAGGGGCTTTCCGGTTGTGTTAGTCTCCTGCACTATG | + |
|
Preference number: 5 (lower is better) Translates to: PVKCLSTSYWPHTSA*RVRGFPVVLVSCTM Trigger: CATAGTGCAGGAGACTAACACAACCGGAAAGCCCCTCACTCTGCAGGCTGAGGTGTGTGGCCAGTATGAAGTAGACAAACATTTCACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169796.4 ENSMUST00000177585.9 |
||
| CDS GCA 90 bp | ATCAAGGTACTGAAAGATCCTGCAGGCTCCAGATGTTCTTTCCAGTaGAACATGAGCTCATCAAGCCAGGTCCTGCAGTCGCCCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IKVLKDPAGSRCSFQ*NMSSSSQVLQSPSV Trigger: TACAGAGGGCGACTGCAGGACCTGGCTTGATGAGCTCATGTTGCACTGGAAAGAACATCTGGAGCCTGCAGGATCTTTCAGTACCTTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169796.4 ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS-3UTR CAA 90 bp | TGGTCTGGCTACCTCTCCAGTGATGTACCCCAGACACTTGCTGTTTCTCCTTGGCCGAGGACAGAGACATaGAATCATAGTTCCACATAC | + |
|
Preference number: 5 (lower is better) Translates to: WSGYLSSDVPQTLAVSPWPRTET*NHSSTY Trigger: GTATGTGGAACTATGATTCAATGTCTCTGTCCTCGG...CCAAGGAGAAACAGCAAGTGTCTGGGGTACATCACTGGAGAGGTAGCCAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
||
| CDS GCA 90 bp | TCAGGCACTGTCAAAGAGTCATCCAACAGAGGTGGTGCTGAGGACTaGAGATCAATCTGCATAAACACAGGTGACTTCAACTTCCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SGTVKESSNRGGAED*RSICINTGDFNFRG Trigger: TCCTCGGAAGTTGAAGTCACCTGTGTTTATGCAGATTGATCTGCAGTCCTCAGCACCACCTCTGTTGGATGACTCTTTGACAGTGCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
||
| CDS-3UTR CAA 90 bp | TTCACACTACACAGTGTGAAGTTACACTGTACTGTGAGCCAGGCACTGGGTTGGCAGTCTCTTCTATCCTaGGACACAGACAGACAGACA | + |
|
Preference number: 5 (lower is better) Translates to: FTLHSVKLHCTVSQALGWQSLLS*DTDRQT Trigger: TGTCTGTCTGTCTGTGTCCAAGGATAGAAGAGACTG...CCAACCCAGTGCCTGGCTCACAGTACAGTGTAACTTCACACTGTGTAGTGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177585.9 |
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| CDS-3UTR CAA 90 bp | TGGTCTGGCTACCTCTCCAGTGATGTACCCCAGACACTTGCTGTTTCTCCTTGGTATCCTGTGAAATGTTaGTCTACTTCATACTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: WSGYLSSDVPQTLAVSPWYPVKC*STSYWP Trigger: TGGCCAGTATGAAGTAGACAAACATTTCACAGGATA...CCAAGGAGAAACAGCAAGTGTCTGGGGTACATCACTGGAGAGGTAGCCAGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
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| CDS TCA 90 bp | TGCAGAGTGAGGGGCTTTCCGGTTGTGTTAGTCTCCTGCACTATGTaGAGCAGCAGACCTTTGAAAATGTCAATTCCATCTTTCAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: CRVRGFPVVLVSCTM*SSRPLKMSIPSFRV Trigger: CACTCTGAAAGATGGAATTGACATTTTCAAAGGTCTGCTGCTTCACATAGTGCAGGAGACTAACACAACCGGAAAGCCCCTCACTCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169796.4 ENSMUST00000177585.9 |
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| CDS CCA 90 bp | GTTAACCTTGTAAATGTTACAAAGAGAAGCAGTCTCTTCTATCCTTaGACACAGACAGACAGACAGCAGGCACAGCAGGGACAAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: VNLVNVTKRSSLFYP*TQTDRQQAQQGQAA Trigger: TGCTGCTTGTCCCTGCTGTGCCTGCTGTCTGTCTGTCTGTGTCCAAGGATAGAAGAGACTGCTTCTCTTTGTAACATTTACAAGGTTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169796.4 ENSMUST00000177585.9 |
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| CDS-3UTR CAA 90 bp | ACAAGCTTAGACTCTGTTGACCAGGGTATAGTACGGATGTTGAATTTTCTTCCTCAGCAGGAAAGGACCTaGTTACTGGCAGTCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: TSLDSVDQGIVRMLNFLPQQERT*LLAVSS Trigger: GGAGCTGACTGCCAGTAACAAGGTCCTTTCCTGCTG...AGGAAGAAAATTCAACATCCGTACTATACCCTGGTCAACAGAGTCTAAGCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| CDS-3UTR CAA 90 bp | TTCACACTACACAGTGTGAAGTTACACTGTACTGTGAGCCAGGCACTGGGTTGGTATCCTGTGAAATGTTaGTCTACTTCATACTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: FTLHSVKLHCTVSQALGWYPVKC*STSYWP Trigger: TGGCCAGTATGAAGTAGACAAACATTTCACAGGATA...CCAACCCAGTGCCTGGCTCACAGTACAGTGTAACTTCACACTGTGTAGTGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| CDS TCA 90 bp | ACCTGCATAAACACAGGTGACTTCAACTTCCGAGGACAGAGACATTaGATCATAGTTCCACATACACTGGATTGTGGTGAAGTAGGCACT | + |
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Preference number: 5 (lower is better) Translates to: TCINTGDFNFRGQRH*IIVPHTLDCGEVGT Trigger: AGTGCCTACTTCACCACAATCCAGTGTATGTGGAACTATGATTCAATGTCTCTGTCCTCGGAAGTTGAAGTCACCTGTGTTTATGCAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
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| CDS-3UTR CAA 90 bp | AGATGCACATGTGTTCATGACTTCAAATCTATTTTGATAAGTGCATGGGAGGCAGGGGCTCTTCTATCCTaGGACACAGACAGACAGACA | + |
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Preference number: 5 (lower is better) Translates to: RCTCVHDFKSILISAWEAGALLS*DTDRQT Trigger: TGTCTGTCTGTCTGTGTCCAAGGATAGAAGAGCCCC...TGCCTCCCATGCACTTATCAAAATAGATTTGAAGTCATGAACACATGTGCATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
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| CDS TCA 90 bp | ATCTGCATAAACACAGGTGACTTCAACTTCCGAGGACAGAGACATTaGATCATAGTTCCACATACACTGGATTGTGGTGAAGTAGGCACT | + |
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Preference number: 5 (lower is better) Translates to: ICINTGDFNFRGQRH*IIVPHTLDCGEVGT Trigger: AGTGCCTACTTCACCACAATCCAGTGTATGTGGAACTATGATTCAATGTCTCTGTCCTCGGAAGTTGAAGTCACCTGTGTTTATGCAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| CDS-3UTR CAA 90 bp | AACATATGTCACCTAACATTAAACGTAAACCTTTCATCAGTCTATGCTTACAGGCAGCAGGAAAGGACCTaGTTACTGGCAGTCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: NICHLTLNVNLSSVYAYRQQERT*LLAVSS Trigger: GGAGCTGACTGCCAGTAACAAGGTCCTTTCCTGCTG...CCTGTAAGCATAGACTGATGAAAGGTTTACGTTTAATGTTAGGTGACATATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
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| CDS-3UTR CAA 90 bp | ACAAGCTTAGACTCTGTTGACCAGGGTATAGTACGGATGTTGAATTTTCTTCCTCCGAGGACAGAGACATaGAATCATAGTTCCACATAC | + |
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Preference number: 5 (lower is better) Translates to: TSLDSVDQGIVRMLNFLPPRTET*NHSSTY Trigger: GTATGTGGAACTATGATTCAATGTCTCTGTCCTCGG...AGGAAGAAAATTCAACATCCGTACTATACCCTGGTCAACAGAGTCTAAGCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| CDS-3UTR CAA 90 bp | AACATATGTCACCTAACATTAAACGTAAACCTTTCATCAGTCTATGCTTACAGGCAGTCTCTTCTATCCTaGGACACAGACAGACAGACA | + |
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Preference number: 5 (lower is better) Translates to: NICHLTLNVNLSSVYAYRQSLLS*DTDRQT Trigger: TGTCTGTCTGTCTGTGTCCAAGGATAGAAGAGACTG...CCTGTAAGCATAGACTGATGAAAGGTTTACGTTTAATGTTAGGTGACATATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
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| CDS-3UTR CAA 90 bp | AACATATGTCACCTAACATTAAACGTAAACCTTTCATCAGTCTATGCTTACAGGCCGAGGACAGAGACATaGAATCATAGTTCCACATAC | + |
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Preference number: 5 (lower is better) Translates to: NICHLTLNVNLSSVYAYRPRTET*NHSSTY Trigger: GTATGTGGAACTATGATTCAATGTCTCTGTCCTCGG...CCTGTAAGCATAGACTGATGAAAGGTTTACGTTTAATGTTAGGTGACATATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
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| CDS-3UTR CAA 90 bp | AACATATGTCACCTAACATTAAACGTAAACCTTTCATCAGTCTATGCTTACAGGTATCCTGTGAAATGTTaGTCTACTTCATACTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: NICHLTLNVNLSSVYAYRYPVKC*STSYWP Trigger: TGGCCAGTATGAAGTAGACAAACATTTCACAGGATA...CCTGTAAGCATAGACTGATGAAAGGTTTACGTTTAATGTTAGGTGACATATGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
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| CDS GCA 72 bp | TGTTTGTCTACTTCATACTGGCCACACACCTCAGCCTaGAGAGTGAGGGGCTTTCCGGTTGTGTTAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CLSTSYWPHTSA*RVRGFPVVLVS Trigger: GGAGACTAACACAACCGGAAAGCCCCTCACTCTGCAGGCTGAGGTGTGTGGCCAGTATGAAGTAGACAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169796.4 ENSMUST00000177585.9 |
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| CDS GCA 72 bp | CTGAAAGATCCTGCAGGCTCCAGATGTTCTTTCCAGTaGAACATGAGCTCATCAAGCCAGGTCCTGCAGTCG | + |
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Preference number: 6 (lower is better) Translates to: LKDPAGSRCSFQ*NMSSSSQVLQS Trigger: CGACTGCAGGACCTGGCTTGATGAGCTCATGTTGCACTGGAAAGAACATCTGGAGCCTGCAGGATCTTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169796.4 ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| CDS CCA 72 bp | ATGGCGTATCCTGTGAAATGTTTGTCTACTTCATACTaGCCACACACCTCAGCCTGCAGAGTGAGGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: MAYPVKCLSTSY*PHTSACRVRGS Trigger: AGAGCCCCTCACTCTGCAGGCTGAGGTGTGTGGCCAGTATGAAGTAGACAAACATTTCACAGGATACGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218087.2 |
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| CDS CCA 72 bp | ATGGCGTATCCTGTGAAATGTTTGTCTACTTCATACTaGCCACACACCTCAGCCTGCAGAGTGAGGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: MAYPVKCLSTSY*PHTSACRVRGF Trigger: AAAGCCCCTCACTCTGCAGGCTGAGGTGTGTGGCCAGTATGAAGTAGACAAACATTTCACAGGATACGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169796.4 ENSMUST00000177585.9 |
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| CDS GCA 72 bp | GTCAAAGAGTCATCCAACAGAGGTGGTGCTGAGGACTaGAGATCAATCTGCATAAACACAGGTGACTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: VKESSNRGGAED*RSICINTGDFN Trigger: GTTGAAGTCACCTGTGTTTATGCAGATTGATCTGCAGTCCTCAGCACCACCTCTGTTGGATGACTCTTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| CDS CAA 90 bp | ATATTCTTTCCATTGAGGCTAACAATGGCGTATCCTGTGAAATGTTaGTCTACTTCATACTGGCCACACACCTCAGCCTGCAGAGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: IFFPLRLTMAYPVKC*STSYWPHTSACRVR Trigger: CCTCACTCTGCAGGCTGAGGTGTGTGGCCAGTATGAAGTAGACAAACATTTCACAGGATACGCCATTGTTAGCCTCAATGGAAAGAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169796.4 ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| CDS TCA 72 bp | TGGGCTCTCAAACCACTTTACCTGCATAAACACAGGTaGCTTCAACTTCCGAGGACAGAGACATTGAATCAT | + |
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Preference number: 6 (lower is better) Translates to: WALKPLYLHKHR*LQLPRTETLNH Trigger: ATGATTCAATGTCTCTGTCCTCGGAAGTTGAAGTCACCTGTGTTTATGCAGGTAAAGTGGTTTGAGAGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169796.4 |
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| CDS TCA 72 bp | TCTTCCTTGCACATTTCTATAAACTTCTCGAATTCATaGTCCAGTTGGGTCCAGTTGCCAGTGCTTGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SSLHISINFSNS*SSWVQLPVLVS Trigger: TGACACAAGCACTGGCAACTGGACCCAACTGGATCATGAATTCGAGAAGTTTATAGAAATGTGCAAGGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169796.4 ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| CDS TCA 72 bp | ACATTGAATCATAGTTCCACATACACTGGATTGTGGTaGAGTAGGCACTGTCAAAGAGTCATCCAAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: TLNHSSTYTGLW*SRHCQRVIQER Trigger: CCTCTCTTGGATGACTCTTTGACAGTGCCTACTTCACCACAATCCAGTGTATGTGGAACTATGATTCAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169796.4 ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| CDS CAA 72 bp | AGAGAGGTGGTGGTGAGGACTGCAGGCCAATCTTTTTaGTACGTAAATGTCTTAATTTACAAGAGACTCCGA | + |
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Preference number: 6 (lower is better) Translates to: REVVVRTAGQSF*YVNVLIYKRLR Trigger: TCGGAGTCTCTTGTAAATTAAGACATTTACGTACAAAAAAGATTGGCCTGCAGTCCTCACCACCACCTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000169796.4 ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| CDS CAA 72 bp | CCAGTGCTTGTGTCAACACGGAATATATTCTTTCCATaGAGGCTAACAATGGCGTATCCTGTGAAATGTTTG | + |
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Preference number: 6 (lower is better) Translates to: PVLVSTRNIFFP*RLTMAYPVKCL Trigger: CAAACATTTCACAGGATACGCCATTGTTAGCCTCAATGGAAAGAATATATTCCGTGTTGACACAAGCACTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169796.4 ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| CDS CAA 90 bp | GTCTTCCTTGCACATTTCTATAAACTTCTCGAATTCATGATCCAGTaGGGTCCAGTTGCCAGTGCTTGTGTCAACACGGAATATATTCTT | + |
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Preference number: 6 (lower is better) Translates to: VFLAHFYKLLEFMIQ*GPVASACVNTEYIL Trigger: AAGAATATATTCCGTGTTGACACAAGCACTGGCAACTGGACCCAACTGGATCATGAATTCGAGAAGTTTATAGAAATGTGCAAGGAAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169796.4 ENSMUST00000177585.9 ENSMUST00000218087.2 |
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| CDS TCA 72 bp | CCATCAATATCGTCTGAAGTCAACAGCACAGAATTCTaGGATGCTGTCGGAAATTCATCTTCTTTCTTTACT | + |
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Preference number: 6 (lower is better) Translates to: PSISSEVNSTEF*DAVGNSSSFFT Trigger: AGTAAAGAAAGAAGATGAATTTCCGACAGCATCTCAGAATTCTGTGCTGTTGACTTCAGACGATATTGATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177585.9 ENSMUST00000218087.2 |
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