Pregenerated sensors for UHRF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024817Ensembl transcript IDs: ENSMUST00000025739.14
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACAGCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTaGACGCCAGATGAGGACAGAGCGGCTTTTCAGAAACATTTACTA | + |
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Preference number: 1 (lower is better) Translates to: HSPPNLQMETTRRNS*TPDEDRAAFQKHLL Trigger: TAGTAAATGTTTCTGAAAAGCCGCTCTGTCCTCATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| 3UTR CCA 90 bp | GATGGCTGTGGGAAAAGAGGTACTGCTGCTTTCGGACGAAAGACATaGTCCAGCTCTGCTTTACCCCTCCCACTCATTGTAAGACTTGTT | + |
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Preference number: 1 (lower is better) Translates to: DGCGKRGTAAFGRKT*SSSALPLPLIVRLV Trigger: AACAAGTCTTACAATGAGTGGGAGGGGTAAAGCAGAGCTGGACCATGTCTTTCGTCCGAAAGCAGCAGTACCTCTTTTCCCACAGCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| 3UTR CCA 90 bp | AGAAGCTGCACTCACTCGCCCCAACAATCCATCTGCCTTCTTTCCTaGACAAGCGAAGTACAAGGAACAGGCACAACTAATACTTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: RSCTHSPQQSICLLS*TSEVQGTGTTNTWE Trigger: CTCCCAAGTATTAGTTGTGCCTGTTCCTTGTACTTCGCTTGTCCAGGAAAGAAGGCAGATGGATTGTTGGGGCGAGTGAGTGCAGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| 3UTR GCA 90 bp | TATGCATATTACAGAAGCTGCACTCACTCGCCCCAACAATCCATCTaGCTTCTTTCCTGGACAAGCGAAGTACAAGGAACAGGCACAACT | + |
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Preference number: 1 (lower is better) Translates to: YAYYRSCTHSPQQSI*LLSWTSEVQGTGTT Trigger: AGTTGTGCCTGTTCCTTGTACTTCGCTTGTCCAGGAAAGAAGGCAGATGGATTGTTGGGGCGAGTGAGTGCAGCTTCTGTAATATGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATATCTGCCTTCTTTCCTaGACAAGCGAAGTACAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SPPNLQMETTRRNSCTPDICLLS*TSEVQG Trigger: TCCTTGTACTTCGCTTGTCCAGGAAAGAAGGCAGAT...ATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| 3UTR-3UTR GCA 90 bp | TGGGTAATCAACTACAGTGGAGGCGTTAAGTCTTCATTCATGAAAATGAGTTGTGACATGGTCCAGCTCTaGTTTACCCCTCCCACTCAT | + |
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Preference number: 2 (lower is better) Translates to: WVINYSGGVKSSFMKMSCDMVQL*FTPPTH Trigger: ATGAGTGGGAGGGGTAAAGCAGAGCTGGACCATGTC...ACAACTCATTTTCATGAATGAAGACTTAACGCCTCCACTGTAGTTGATTACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| 3UTR GCA 72 bp | ACACACACAGGAGGATGGCTGTGGGAAAAGAGGTACTaGTGCTTTCGGACGAAAGACATGGTCCAGCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: THTGGWLWEKRY*CFRTKDMVQLC Trigger: GCAGAGCTGGACCATGTCTTTCGTCCGAAAGCAGCAGTACCTCTTTTCCCACAGCCATCCTCCTGTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| 3UTR CCA 72 bp | TTCTCAAAAGCCAGCACAGCCCTCCTAATCTGCAGATaGAGACCACTAGGAGGAATTCCTGCACGCCAGATG | + |
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Preference number: 3 (lower is better) Translates to: FSKASTALLICR*RPLGGIPARQM Trigger: CATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGCTGTGCTGGCTTTTGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| 3UTR GCA 72 bp | CCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTaGACGCCAGATGAGGACAGAGCGGCTTTTCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: PNLQMETTRRNS*TPDEDRAAFQK Trigger: TTTCTGAAAAGCCGCTCTGTCCTCATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| 3UTR CCA 72 bp | GGGAAAAGAGGTACTGCTGCTTTCGGACGAAAGACATaGTCCAGCTCTGCTTTACCCCTCCCACTCATTGTA | + |
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Preference number: 3 (lower is better) Translates to: GKRGTAAFGRKT*SSSALPLPLIV Trigger: TACAATGAGTGGGAGGGGTAAAGCAGAGCTGGACCATGTCTTTCGTCCGAAAGCAGCAGTACCTCTTTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| 3UTR CCA 72 bp | ACTCACTCGCCCCAACAATCCATCTGCCTTCTTTCCTaGACAAGCGAAGTACAAGGAACAGGCACAACTAAT | + |
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Preference number: 3 (lower is better) Translates to: THSPQQSICLLS*TSEVQGTGTTN Trigger: ATTAGTTGTGCCTGTTCCTTGTACTTCGCTTGTCCAGGAAAGAAGGCAGATGGATTGTTGGGGCGAGTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| 3UTR-3UTR CAA 90 bp | AGCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATAAAATGAACATGTTCTaGCAAAACACGCATGGTGAT | + |
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Preference number: 3 (lower is better) Translates to: SPPNLQMETTRRNSCTPDKMNMF*QNTHGD Trigger: ATCACCATGCGTGTTTTGCAAGAACATGTTCATTTT...ATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR GCA 90 bp | GTACTGCTGCTTTCGGACGAAAGACATGGTCCAGCTCTGCTTTACCCCTCCCACCACAAGCCATTCCCCTaGCCCAGTCCCTCCGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VLLLSDERHGPALLYPSHHKPFP*PSPSGS Trigger: AGAGCCGGAGGGACTGGGGCAGGGGAATGGCTTGTG...GTGGGAGGGGTAAAGCAGAGCTGGACCATGTCTTTCGTCCGAAAGCAGCAGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR GCA 90 bp | GCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATGAAACGTCCTCGATGGTaGGCGTCTGGGAGCCGTCGA | + |
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Preference number: 4 (lower is better) Translates to: ALLICRWRPLGGIPARQMKRPRW*ASGSRR Trigger: TCGACGGCTCCCAGACGCGCACCATCGAGGACGTTT...CATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CCA 90 bp | GTACTGCTGCTTTCGGACGAAAGACATGGTCCAGCTCTGCTTTACCCCTCCCACTTCTGCCCGAGATCATaGCGGCAAGCAGGGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: VLLLSDERHGPALLYPSHFCPRS*RQAGQE Trigger: CTCCTGCCCTGCTTGCCGCCATGATCTCGGGCAGAA...GTGGGAGGGGTAAAGCAGAGCTGGACCATGTCTTTCGTCCGAAAGCAGCAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR TCA 90 bp | GTACTGCTGCTTTCGGACGAAAGACATGGTCCAGCTCTGCTTTACCCCTCCCACCCAACATGTGGCCGATaGACACCTGCTTCGCTCACC | + |
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Preference number: 4 (lower is better) Translates to: VLLLSDERHGPALLYPSHPTCGR*TPASLT Trigger: GGTGAGCGAAGCAGGTGTTCATCGGCCACATGTTGG...GTGGGAGGGGTAAAGCAGAGCTGGACCATGTCTTTCGTCCGAAAGCAGCAGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR GCA 90 bp | GTACTGCTGCTTTCGGACGAAAGACATGGTCCAGCTCTGCTTTACCCCTCCCACGTGGCCTCACTGCCCTaGTTCTTTGACTGCCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: VLLLSDERHGPALLYPSHVASLP*FFDCPL Trigger: CAAGGGGCAGTCAAAGAAGCAGGGCAGTGAGGCCAC...GTGGGAGGGGTAAAGCAGAGCTGGACCATGTCTTTCGTCCGAAAGCAGCAGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR GCA 90 bp | GCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATGCCTCGATGGTGGCTTTaGGAGAAACGTCCTCGATGG | + |
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Preference number: 4 (lower is better) Translates to: ALLICRWRPLGGIPARQMPRWWL*EKRPRW Trigger: CCATCGAGGACGTTTCTCGCAAAGCCACCATCGAGG...CATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CCA 90 bp | AGCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATCTGAAGCTGGCCTTTTaGTGGCCTCACTGCCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SPPNLQMETTRRNSCTPDLKLAF*WPHCPA Trigger: AGCAGGGCAGTGAGGCCACCAAAAGGCCAGCTTCAG...ATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CCA 90 bp | GTACTGCTGCTTTCGGACGAAAGACATGGTCCAGCTCTGCTTTACCCCTCCCACGGGCAGGAGAAAACCTaGGCCTTAAAGGAGCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VLLLSDERHGPALLYPSHGQEKT*ALKERC Trigger: ACAGCGCTCCTTTAAGGCCCAGGTTTTCTCCTGCCC...GTGGGAGGGGTAAAGCAGAGCTGGACCATGTCTTTCGTCCGAAAGCAGCAGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR TCA 90 bp | GCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATGGCTCTCAGTACTGGCTaGGGGCATCTTCGCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: ALLICRWRPLGGIPARQMALSTG*GHLRFL Trigger: AAGAAAGCGAAGATGCCCTCAGCCAGTACTGAGAGC...CATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR GCA 90 bp | GCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATGTGGCCGATGAACACCTaGTTCGCTCACCTGAACTCT | + |
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Preference number: 4 (lower is better) Translates to: ALLICRWRPLGGIPARQMWPMNT*FAHLNS Trigger: AGAGTTCAGGTGAGCGAAGCAGGTGTTCATCGGCCA...CATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CCA 90 bp | AGCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATGCAGCTCCTCGATGGTaGCTTTGCGAGAAACGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SPPNLQMETTRRNSCTPDAAPRW*LCEKRP Trigger: AGGACGTTTCTCGCAAAGCCACCATCGAGGAGCTGC...ATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CCA 90 bp | GCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATGGCAAAGGAAATGGGATaGGCTCCAGGCTTCTCAATC | + |
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Preference number: 4 (lower is better) Translates to: ALLICRWRPLGGIPARQMAKEMG*APGFSI Trigger: GATTGAGAAGCCTGGAGCCCATCCCATTTCCTTTGC...CATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR TCA 90 bp | AGCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATCCTGCTTCGCTCACCTaGACTCTGAATCTCCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: SPPNLQMETTRRNSCTPDPASLT*TLNLQV Trigger: AACTTGGAGATTCAGAGTTCAGGTGAGCGAAGCAGG...ATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CCA 90 bp | GCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATGAATTCCACCAACATGTaGCCGATGAACACCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: ALLICRWRPLGGIPARQMNSTNM*PMNTCF Trigger: GAAGCAGGTGTTCATCGGCCACATGTTGGTGGAATT...CATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CCA 90 bp | GCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATGATGTTTGTTAGTGTCTaGTCAGCCGATGGAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ALLICRWRPLGGIPARQMMFVSV*SADGAP Trigger: TGGAGCTCCATCGGCTGACCAGACACTAACAAACAT...CATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CCA 90 bp | GCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATGATGCCTTCAGCACTTTaGAGTCACCTGGACACTCAT | + |
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Preference number: 4 (lower is better) Translates to: ALLICRWRPLGGIPARQMMPSAL*SHLDTH Trigger: ATGAGTGTCCAGGTGACTCCAAAGTGCTGAAGGCAT...CATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR TCA 90 bp | GCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATGTCCTTACAGACGTTGTaGAAGCATTCAGTTGTGACA | + |
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Preference number: 4 (lower is better) Translates to: ALLICRWRPLGGIPARQMSLQTL*KHSVVT Trigger: TGTCACAACTGAATGCTTTCACAACGTCTGTAAGGA...CATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR GCA 90 bp | GCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATGGGAAGATCCCCCTCTTaGTGTTTTCTTTACTTTAGG | + |
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Preference number: 4 (lower is better) Translates to: ALLICRWRPLGGIPARQMGRSPS*CFLYFR Trigger: CCTAAAGTAAAGAAAACAGCAAGAGGGGGATCTTCC...CATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CCA 90 bp | AGCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATTCTTTGACTGCCCCTTaGTCTTCTTGCCTTCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: SPPNLQMETTRRNSCTPDSLTAP*SSCLPF Trigger: AAAAGGAAGGCAAGAAGACCAAGGGGCAGTCAAAGA...ATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR TCA 90 bp | GTACTGCTGCTTTCGGACGAAAGACATGGTCCAGCTCTGCTTTACCCCTCCCACTTCCTTTTTGGTCCTTaGTATTGTCTTCAGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: VLLLSDERHGPALLYPSHFLFGP*YCLQCG Trigger: ACCACACTGAAGACAATATCAAGGACCAAAAAGGAA...GTGGGAGGGGTAAAGCAGAGCTGGACCATGTCTTTCGTCCGAAAGCAGCAGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CCA 90 bp | GTACTGCTGCTTTCGGACGAAAGACATGGTCCAGCTCTGCTTTACCCCTCCCACCACGAACTTCCTTTTTaGTCCTTGATATTGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VLLLSDERHGPALLYPSHHELPF*SLILSS Trigger: TGAAGACAATATCAAGGACCAAAAAGGAAGTTCGTG...GTGGGAGGGGTAAAGCAGAGCTGGACCATGTCTTTCGTCCGAAAGCAGCAGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR TCA 90 bp | TACACACACAGGAGGATGGCTGTGGGAAAAGAGGTACTGCTGCTTTCGGACGAATCTCATTTAGAACCATaGCATAATTCTGCCCGAGAT | + |
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Preference number: 4 (lower is better) Translates to: YTHRRMAVGKEVLLLSDESHLEP*HNSARD Trigger: ATCTCGGGCAGAATTATGTCATGGTTCTAAATGAGA...TTCGTCCGAAAGCAGCAGTACCTCTTTTCCCACAGCCATCCTCCTGTGTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR GCA 90 bp | TGGGTAATCAACTACAGTGGAGGCGTTAAGTCTTCATTCATGAAAATGAGTTGTTTCCGAGGGGTAACCTaGTGGGTACTGCAATCGCAG | + |
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Preference number: 4 (lower is better) Translates to: WVINYSGGVKSSFMKMSCFRGVT*WVLQSQ Trigger: CTGCGATTGCAGTACCCAGCAGGTTACCCCTCGGAA...ACAACTCATTTTCATGAATGAAGACTTAACGCCTCCACTGTAGTTGATTACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CCA 90 bp | TGGGTAATCAACTACAGTGGAGGCGTTAAGTCTTCATTCATGAAAATGAGTTGTAAGCTGGCCTTTTGGTaGCCTCACTGCCCTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: WVINYSGGVKSSFMKMSCKLAFW*PHCPAS Trigger: AGAAGCAGGGCAGTGAGGCCACCAAAAGGCCAGCTT...ACAACTCATTTTCATGAATGAAGACTTAACGCCTCCACTGTAGTTGATTACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR TCA 90 bp | TGGGTAATCAACTACAGTGGAGGCGTTAAGTCTTCATTCATGAAAATGAGTTGTGCTGATGTAGATGGCTaGCTGGAAGATCCCCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: WVINYSGGVKSSFMKMSCADVDG*LEDPPL Trigger: AAGAGGGGGATCTTCCAGTCAGCCATCTACATCAGC...ACAACTCATTTTCATGAATGAAGACTTAACGCCTCCACTGTAGTTGATTACCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CCA 90 bp | TGGGTAATCAACTACAGTGGAGGCGTTAAGTCTTCATTCATGAAAATGAGTTGTGACTTTGTCCAGAGGTaGGCTCAGGCAGTAAATGTG | + |
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Preference number: 4 (lower is better) Translates to: WVINYSGGVKSSFMKMSCDFVQR*AQAVNV Trigger: CACATTTACTGCCTGAGCCCACCTCTGGACAAAGTC...ACAACTCATTTTCATGAATGAAGACTTAACGCCTCCACTGTAGTTGATTACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CCA 90 bp | TGGGTAATCAACTACAGTGGAGGCGTTAAGTCTTCATTCATGAAAATGAGTTGTCATTCCATTTTAAAATaGTCCTTGCTCGTGGTCGAA | + |
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Preference number: 4 (lower is better) Translates to: WVINYSGGVKSSFMKMSCHSILK*SLLVVE Trigger: TTCGACCACGAGCAAGGACCATTTTAAAATGGAATG...ACAACTCATTTTCATGAATGAAGACTTAACGCCTCCACTGTAGTTGATTACCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CAA 90 bp | AGCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATCACAGCAGCTGCATGTaGGGGTCCCGCTTCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SPPNLQMETTRRNSCTPDHSSCM*GSRFSP Trigger: TGGAGAGAAGCGGGACCCCAACATGCAGCTGCTGTG...ATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CAA 90 bp | GCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATGATGCCCTGTTCATGTTaGTTAGTGTCTGGTCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: ALLICRWRPLGGIPARQMMPCSC*LVSGQP Trigger: CGGCTGACCAGACACTAACAAACATGAACAGGGCAT...CATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CAA 90 bp | GCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATGCCTCTACAGCATCTGTaGAATCTGATGCCTTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: ALLICRWRPLGGIPARQMPLQHL*NLMPSA Trigger: TGCTGAAGGCATCAGATTCAACAGATGCTGTAGAGG...CATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS TCA 90 bp | GGAAGAAGAGGTCAAGCAGAGTTTGGAGGGTCTCATTTAGAACCATaGCATAATTCTGCCCGAGATCATGGCGGCAAGCAGGGCAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: GRRGQAEFGGSHLEP*HNSARDHGGKQGRR Trigger: TCTCCTGCCCTGCTTGCCGCCATGATCTCGGGCAGAATTATGTCATGGTTCTAAATGAGACCCTCCAAACTCTGCTTGACCTCTTCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CAA 90 bp | GCCCTCCTAATCTGCAGATGGAGACCACTAGGAGGAATTCCTGCACGCCAGATGATTTTAAAATGGTCCTaGCTCGTGGTCGAAGATCCT | + |
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Preference number: 5 (lower is better) Translates to: ALLICRWRPLGGIPARQMILKWS*LVVEDP Trigger: AGGATCTTCGACCACGAGCAAGGACCATTTTAAAAT...CATCTGGCGTGCAGGAATTCCTCCTAGTGGTCTCCATCTGCAGATTAGGAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CAA 90 bp | TACACACACAGGAGGATGGCTGTGGGAAAAGAGGTACTGCTGCTTTCGGACGAATTCTTCTTACTCAGCTaGAGTCTCTCTCCAGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: YTHRRMAVGKEVLLLSDEFFLLS*SLSPAF Trigger: AAAGGCTGGAGAGAGACTCAAGCTGAGTAAGAAGAA...TTCGTCCGAAAGCAGCAGTACCTCTTTTCCCACAGCCATCCTCCTGTGTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CAA 90 bp | TACACACACAGGAGGATGGCTGTGGGAAAAGAGGTACTGCTGCTTTCGGACGAAACACGAACTTCCTTTTaGGTCCTTGATATTGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: YTHRRMAVGKEVLLLSDETRTSF*VLDIVF Trigger: GAAGACAATATCAAGGACCAAAAAGGAAGTTCGTGT...TTCGTCCGAAAGCAGCAGTACCTCTTTTCCCACAGCCATCCTCCTGTGTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CAA 90 bp | TGGGTAATCAACTACAGTGGAGGCGTTAAGTCTTCATTCATGAAAATGAGTTGTTGCCCCTTGGTCTTCTaGCCTTCCTTTTCCGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: WVINYSGGVKSSFMKMSCCPLVF*PSFSEG Trigger: CCCCTCGGAAAAGGAAGGCAAGAAGACCAAGGGGCA...ACAACTCATTTTCATGAATGAAGACTTAACGCCTCCACTGTAGTTGATTACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS-3UTR CAA 90 bp | TGGGTAATCAACTACAGTGGAGGCGTTAAGTCTTCATTCATGAAAATGAGTTGTTACCAAAATCCTCTTTaGCCTGGATTTTCTACATTG | + |
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Preference number: 5 (lower is better) Translates to: WVINYSGGVKSSFMKMSCYQNPL*PGFSTL Trigger: CAATGTAGAAAATCCAGGCAAAAGAGGATTTTGGTA...ACAACTCATTTTCATGAATGAAGACTTAACGCCTCCACTGTAGTTGATTACCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS GCA 72 bp | CCTCGATGGTGGCTTTGCGAGAAACGTCCTCGATGGTaGGCGTCTGGGAGCCGTCGATGGTGCGGACCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PRWWLCEKRPRW*ASGSRRWCGPG Trigger: TCCAGGTCCGCACCATCGACGGCTCCCAGACGCGCACCATCGAGGACGTTTCTCGCAAAGCCACCATCGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS CCA 72 bp | GCTCCTCGATGGTGGCTTTGCGAGAAACGTCCTCGATaGTGCGCGTCTGGGAGCCGTCGATGGTGCGGACCT | + |
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Preference number: 6 (lower is better) Translates to: APRWWLCEKRPR*CASGSRRWCGP Trigger: AGGTCCGCACCATCGACGGCTCCCAGACGCGCACCATCGAGGACGTTTCTCGCAAAGCCACCATCGAGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS CCA 72 bp | AGGCCATATTGCACTCGTCACACAGCAGCTGCATGTTaGGGTCCCGCTTCTCTCCACACTTATGACACGAAC | + |
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Preference number: 6 (lower is better) Translates to: RPYCTRHTAAAC*GPASLHTYDTN Trigger: GTTCGTGTCATAAGTGTGGAGAGAAGCGGGACCCCAACATGCAGCTGCTGTGTGACGAGTGCAATATGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS CCA 72 bp | CTACAGCATCTGTTGAATCTGATGCCTTCAGCACTTTaGAGTCACCTGGACACTCATCATCTGAAGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LQHLLNLMPSAL*SHLDTHHLKLA Trigger: GGCCAGCTTCAGATGATGAGTGTCCAGGTGACTCCAAAGTGCTGAAGGCATCAGATTCAACAGATGCTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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| CDS CAA 72 bp | TCTACAGCATCTGTTGAATCTGATGCCTTCAGCACTTaGGAGTCACCTGGACACTCATCATCTGAAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: STASVESDAFST*ESPGHSSSEAG Trigger: GCCAGCTTCAGATGATGAGTGTCCAGGTGACTCCAAAGTGCTGAAGGCATCAGATTCAACAGATGCTGTAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025739.14 |
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