Pregenerated sensors for UHRF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001228Ensembl transcript IDs: ENSMUST00000001258.15, ENSMUST00000113035.8, ENSMUST00000113038.8, ENSMUST00000113039.9, ENSMUST00000142387.2
Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCAAGGTAGACATCCAATGCTCAGTGGTGAGGGGAGTGAAGAAGTaGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: FKVDIQCSVVRGVKK*PAQGTCSFSPAGPL Trigger: CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCTCACCACTGAGCATTGGATGTCTACCTTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR GCA 90 bp | GTCAGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATaGTCAGTGGTGAGGGGAGTGAAGAAGTGGCCAGCCCAAGGCACA | + |
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Preference number: 1 (lower is better) Translates to: VSALSENQAFKVDIQ*SVVRGVKKWPAQGT Trigger: TGTGCCTTGGGCTGGCCACTTCTTCACTCCCCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR CCA 90 bp | AGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATaGTTTCTAGGCAGCTGGTGTGGGGAGAACTCCTACCAGCATGAC | + |
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Preference number: 1 (lower is better) Translates to: SCQEDMSGLFKDGCR*FLGSWCGENSYQHD Trigger: GTCATGCTGGTAGGAGTTCTCCCCACACCAGCTGCCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR GCA 90 bp | ACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTaGAGATGGTTTCTAGGCAGCTGGTGTGGGGAGAACTCCTACCAG | + |
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Preference number: 1 (lower is better) Translates to: TDSCQEDMSGLFKDG*RWFLGSWCGENSYQ Trigger: CTGGTAGGAGTTCTCCCCACACCAGCTGCCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR CCA 90 bp | ATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGCAGCTaGTGTGGGGAGAACTCCTACCAGCATGACATGAGGCCTGGTATG | + |
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Preference number: 1 (lower is better) Translates to: MSGLFKDGCRWFLGS*CGENSYQHDMRPGM Trigger: CATACCAGGCCTCATGTCATGCTGGTAGGAGTTCTCCCCACACCAGCTGCCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACAATGAAGTTGGAACCATaGGCCCTCTGCCTGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: QPKAHAASAQLVPWPEATMKLEP*ALCLGL Trigger: GAGACCCAGGCAGAGGGCTCATGGTTCCAACTTCAT...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | AGGGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTGCATCTATGAAGGTCTaGGGGGCAGCTGCAGGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: RGVKKWPAQGTCSFSPAGASMKV*GAAAGA Trigger: GGCCCCTGCAGCTGCCCCTCAGACCTTCATAGATGC...ACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCGCATCTATGAAGGTCTaGGGGGCAGCTGCAGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: PGLRPQPTPLCNHVSEWRASMKV*GAAAGA Trigger: GGCCCCTGCAGCTGCCCCTCAGACCTTCATAGATGC...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCGGGCCACCCCTGGAATaGAGCACACAGATAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PGLRPQPTPLCNHVSEWRGPPLE*STQIAA Trigger: GGCAGCTATCTGTGTGCTTCATTCCAGGGGTGGCCC...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACATGGTTTCTAGGCAGCTaGTGTGGGGAGAACTCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: QPKAHAASAQLVPWPEATWFLGS*CGENSY Trigger: GTAGGAGTTCTCCCCACACCAGCTGCCTAGAAACCA...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCATGAAGTTGGAACCATaGGCCCTCTGCCTGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: PGLRPQPTPLCNHVSEWRMKLEP*ALCLGL Trigger: GAGACCCAGGCAGAGGGCTCATGGTTCCAACTTCAT...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACACTGGTAGCCAGAACATaGGATTCCTATAGATGCCTG | + |
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Preference number: 2 (lower is better) Translates to: QPKAHAASAQLVPWPEATLVART*DSYRCL Trigger: CAGGCATCTATAGGAATCCCATGTTCTGGCTACCAG...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTTCTAGGCAGCTGGTGTaGGGAGAACTCCTACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RGVKKWPAQGTCSFSPAGSRQLV*GELLPA Trigger: TGCTGGTAGGAGTTCTCCCCACACCAGCTGCCTAGA...ACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGTGGTTTCTAGGCAGCTaGTGTGGGGAGAACTCCTAC | + |
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Preference number: 2 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLWFLGS*CGENSY Trigger: GTAGGAGTTCTCCCCACACCAGCTGCCTAGAAACCA...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACAAAAGATGGGTGCAGATaGTTTCTAGGCAGCTGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: QPKAHAASAQLVPWPEATKDGCR*FLGSWC Trigger: ACACCAGCTGCCTAGAAACCATCTGCACCCATCTTT...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGTGCCTGGTTAACTGGTaGCCAGATCAGAAGAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLCLVNW*PDQKSC Trigger: GCAACTCTTCTGATCTGGTCACCAGTTAACCAGGCA...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | GGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCGAACTCCTACCAGCATaGCATGAGGCCTGGTATGAA | + |
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Preference number: 2 (lower is better) Translates to: GSEEVASPRHMQLQPSWSELLPA*HEAWYE Trigger: TTCATACCAGGCCTCATGTCATGCTGGTAGGAGTTC...GGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGAACTCCTACCAGCATaGCATGAGGCCTGGTATGAA | + |
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Preference number: 2 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLELLPA*HEAWYE Trigger: TTCATACCAGGCCTCATGTCATGCTGGTAGGAGTTC...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGGCTGGTCCCCTGGCCTaGGGCCACAGCCAACTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: SALSENQAFKVDIQCSVVAGPLA*GHSQLP Trigger: GGGGAGTTGGCTGTGGCCTCAGGCCAGGGGACCAGC...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR GCA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGCAGCCAACTCCCCTCTaGAATCATGTCAGTGAATGG | + |
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Preference number: 2 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLQPTPL*NHVSEW Trigger: CCATTCACTGACATGATTGCAGAGGGGAGTTGGCTG...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCTGCCTGGTTAACTGGTaGCCAGATCAGAAGAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: PGLRPQPTPLCNHVSEWRCLVNW*PDQKSC Trigger: GCAACTCTTCTGATCTGGTCACCAGTTAACCAGGCA...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGAAAGATGGGTGCAGATaGTTTCTAGGCAGCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLKDGCR*FLGSWC Trigger: ACACCAGCTGCCTAGAAACCATCTGCACCCATCTTT...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGCCAGGAAGACATGTCTaGGCTTTTCAAAGATGGGTG | + |
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Preference number: 2 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLPGRHV*AFQRWV Trigger: CACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGG...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGGCATCTATGAAGGTCTaGGGGGCAGCTGCAGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: ALSENQAFKVDIQCSVVRASMKV*GAAAGA Trigger: GGCCCCTGCAGCTGCCCCTCAGACCTTCATAGATGC...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCTGGTAGCCAGAACATaGGATTCCTATAGATGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RGVKKWPAQGTCSFSPAGLVART*DSYRCL Trigger: CAGGCATCTATAGGAATCCCATGTTCTGGCTACCAG...ACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGGGGCCACCCCTGGAATaGAGCACACAGATAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: ALSENQAFKVDIQCSVVRGPPLE*STQIAA Trigger: GGCAGCTATCTGTGTGCTTCATTCCAGGGGTGGCCC...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR CCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTACAGCTTCAGCCCAGCTaGTCCCCTGGCCTGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLQLQPS*SPGLRP Trigger: TGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTG...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGGGAGTGAAGAAGTaGCCAGCCCAAGGCACATGC | + |
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Preference number: 2 (lower is better) Translates to: SALSENQAFKVDIQCSVVRGVKK*PAQGTC Trigger: GCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCT...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGATGAAGTTGGAACCATaGGCCCTCTGCCTGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: SALSENQAFKVDIQCSVVMKLEP*ALCLGL Trigger: GAGACCCAGGCAGAGGGCTCATGGTTCCAACTTCAT...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR CCA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCATGGTTTCTAGGCAGCTaGTGTGGGGAGAACTCCTAC | + |
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Preference number: 2 (lower is better) Translates to: STQIAARKTCLGFSKMGAWFLGS*CGENSY Trigger: GTAGGAGTTCTCCCCACACCAGCTGCCTAGAAACCA...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR CCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTGCCCAGCTGGTCCCCTaGCCTGAGGCCACAGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: VQAVTTKEIHRGNPFISLAQLVP*PEATAN Trigger: GTTGGCTGTGGCCTCAGGCCAGGGGACCAGCTGGGC...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGAAGGGGGTGGAGGGATaGAAAACAGAAGTCCAACTG | + |
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Preference number: 2 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRKGVEG*KTEVQL Trigger: CAGTTGGACTTCTGTTTTTCATCCCTCCACCCCCTT...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGAACTCCTACCAGCATaGCATGAGGCCTGGTATGAA | + |
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Preference number: 2 (lower is better) Translates to: STQIAARKTCLGFSKMGAELLPA*HEAWYE Trigger: TTCATACCAGGCCTCATGTCATGCTGGTAGGAGTTC...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGGGCCACCCCTGGAATaGAGCACACAGATAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLGPPLE*STQIAA Trigger: GGCAGCTATCTGTGTGCTTCATTCCAGGGGTGGCCC...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGTGCCTGGTTAACTGGTaGCCAGATCAGAAGAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: SALSENQAFKVDIQCSVVCLVNW*PDQKSC Trigger: GCAACTCTTCTGATCTGGTCACCAGTTAACCAGGCA...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR CCA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCACTGGTAGCCAGAACATaGGATTCCTATAGATGCCTG | + |
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Preference number: 2 (lower is better) Translates to: STQIAARKTCLGFSKMGALVART*DSYRCL Trigger: CAGGCATCTATAGGAATCCCATGTTCTGGCTACCAG...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR CCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGAAAGATGGGTGCAGATaGTTTCTAGGCAGCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: ALSENQAFKVDIQCSVVRKDGCR*FLGSWC Trigger: ACACCAGCTGCCTAGAAACCATCTGCACCCATCTTT...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAATGAAGTTGGAACCATaGGCCCTCTGCCTGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLMKLEP*ALCLGL Trigger: GAGACCCAGGCAGAGGGCTCATGGTTCCAACTTCAT...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGAAGCTAAACACACTATaGAGTTGGAACCATGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRKLNTL*SWNHEP Trigger: GGGCTCATGGTTCCAACTTCATAGTGTGTTTAGCTT...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| 3UTR-3UTR TCA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGTGCCTGGTTAACTGGTaGCCAGATCAGAAGAGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: CAVQSACSKWFSFHETHLCLVNW*PDQKSC Trigger: GCAACTCTTCTGATCTGGTCACCAGTTAACCAGGCA...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGCCAGGAAGACATGTCTaGGCTTTTCAAAGATGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SALSENQAFKVDIQCSVVPGRHV*AFQRWV Trigger: CACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGG...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGAGTCAGTGCACTCTCTaGAAACCAGGCTTTCAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: CAVQSACSKWFSFHETHLSQCTL*KPGFQG Trigger: ACCTTGAAAGCCTGGTTTTCAGAGAGTGCACTGACT...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR-3UTR TCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAAAGGGGGTGGAGGGATaGAAAACAGAAGTCCAACTG | + |
|
Preference number: 2 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLKGVEG*KTEVQL Trigger: CAGTTGGACTTCTGTTTTTCATCCCTCCACCCCCTT...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR-3UTR TCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGAACTCCTACCAGCATaGCATGAGGCCTGGTATGAA | + |
|
Preference number: 2 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLELLPA*HEAWYE Trigger: TTCATACCAGGCCTCATGTCATGCTGGTAGGAGTTC...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR-3UTR TCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTCATCTCTGCCTTCCATaGCACCCAGTCAGTGCACTC | + |
|
Preference number: 2 (lower is better) Translates to: VQAVTTKEIHRGNPFISLHLCLP*HPVSAL Trigger: GAGTGCACTGACTGGGTGTCATGGAAGGCAGAGATG...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR-3UTR GCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTACAGCCAACTCCCCTCTaGAATCATGTCAGTGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLQPTPL*NHVSEW Trigger: CCATTCACTGACATGATTGCAGAGGGGAGTTGGCTG...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR-3UTR TCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAAGTCAGTGCACTCTCTaGAAACCAGGCTTTCAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLSQCTL*KPGFQG Trigger: ACCTTGAAAGCCTGGTTTTCAGAGAGTGCACTGACT...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR-3UTR TCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTAAGGGGGTGGAGGGATaGAAAACAGAAGTCCAACTG | + |
|
Preference number: 2 (lower is better) Translates to: VQAVTTKEIHRGNPFISLKGVEG*KTEVQL Trigger: CAGTTGGACTTCTGTTTTTCATCCCTCCACCCCCTT...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR-3UTR CCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTCTGGTAGCCAGAACATaGGATTCCTATAGATGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: VQAVTTKEIHRGNPFISLLVART*DSYRCL Trigger: CAGGCATCTATAGGAATCCCATGTTCTGGCTACCAG...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR TCA 72 bp | GGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTaGGGCCACAGCCAACTCCCCTCTGCAATCATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GTCSFSPAGPLA*GHSQLPSAIMS Trigger: TGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR CCA 72 bp | GACATCCAATGCTCAGTGGTGAGGGGAGTGAAGAAGTaGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DIQCSVVRGVKK*PAQGTCSFSPA Trigger: AGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCTCACCACTGAGCATTGGATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR GCA 72 bp | TGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTaGAGATGGTTTCTAGGCAGCTGGTGTGGGGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: CQEDMSGLFKDG*RWFLGSWCGEN Trigger: GTTCTCCCCACACCAGCTGCCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR GCA 72 bp | CTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATaGTCAGTGGTGAGGGGAGTGAAGAAGTGGCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSENQAFKVDIQ*SVVRGVKKWPA Trigger: GGCTGGCCACTTCTTCACTCCCCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR TCA 72 bp | TCTAGGCAGCTGGTGTGGGGAGAACTCCTACCAGCATaGCATGAGGCCTGGTATGAAACTCAACGGTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SRQLVWGELLPA*HEAWYETQRFL Trigger: TAGAAACCGTTGAGTTTCATACCAGGCCTCATGTCATGCTGGTAGGAGTTCTCCCCACACCAGCTGCCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR CCA 72 bp | GAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATaGTTTCTAGGCAGCTGGTGTGGGGAGAACTCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: EDMSGLFKDGCR*FLGSWCGENSY Trigger: GTAGGAGTTCTCCCCACACCAGCTGCCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR TCA 72 bp | AAACCCATAATACAGAAACCCTCAGAATTCTGTTGCTaGGTTAAAAATGAGATGGAACTGATAACACATCTC | + |
|
Preference number: 3 (lower is better) Translates to: KPIIQKPSEFCC*VKNEMELITHL Trigger: GAGATGTGTTATCAGTTCCATCTCATTTTTAACTCAGCAACAGAATTCTGAGGGTTTCTGTATTATGGGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACAGACAGGCTGGGCAGCTaGACACCTGGGCCCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATDRLGS*TPGPGR Trigger: CCTTCCGGGCCCAGGTGTTCAGCTGCCCAGCCTGTC...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACACACATGCCATGCCCTTaGCCCAGTCCCGCCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATHMPCP*PSPAGR Trigger: CCTCCCGGCGGGACTGGGGCAAGGGCATGGCATGTG...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACAGTCGAGTGCGGTCCTTaGCCTCCCGGGTCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATVECGP*PPGSRA Trigger: AGCCCTGGACCCGGGAGGGCAAGGACCGCACTCGAC...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGACAGGCTGGGCAGCTaGACACCTGGGCCCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLDRLGS*TPGPGR Trigger: CCTTCCGGGCCCAGGTGTTCAGCTGCCCAGCCTGTC...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGTCGAGTGCGGTCCTTaGCCTCCCGGGTCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLVECGP*PPGSRA Trigger: AGCCCTGGACCCGGGAGGGCAAGGACCGCACTCGAC...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCGGCCCACACATGCCATaGCCTTGCCCCAGTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGLRPQPTPLCNHVSEWRGPHMP*PCPSPA Trigger: GGCGGGACTGGGGCAAGGGCATGGCATGTGTGGGCC...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACATGCTCCGGCCATGGATaGCTGCCACATGAGGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATCSGHG*LPHEAD Trigger: ATCGGCCTCATGTGGCAGGCATCCATGGCCGGAGCA...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCGTCGAGTGCGGTCCTTaGCCTCCCGGGTCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLRPQPTPLCNHVSEWRVECGP*PPGSRA Trigger: AGCCCTGGACCCGGGAGGGCAAGGACCGCACTCGAC...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGCCGGCCATGGATGCCTaGCACATGAGGCCGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLPAMDA*HMRPMH Trigger: GTGCATCGGCCTCATGTGGCAGGCATCCATGGCCGG...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACATGTACCTGGACCACCTaGGCCTCAAACCATGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATCTWTT*ASNHAP Trigger: CGGTGCATGGTTTGAGGCCCAGGTGGTCCAGGTACA...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCGAAGATGAGGGTCCCTaGTCCAAGGCCTTGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLRPQPTPLCNHVSEWREDEGP*SKALAG Trigger: CCCGGCCAAGGCCTTGGAGCAGGGACCCTCATCTTC...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACATGGTTGAGAATGGTCTaGAAGGGCTGGTTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATWLRMV*KGWFTR Trigger: CCGGGTGAACCAGCCCTTGCAGACCATTCTCAACCA...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACAGCTCTCTTCTGTACCTaGACCACCTGGGCCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATALFCT*TTWASN Trigger: GTTTGAGGCCCAGGTGGTCCAGGTACAGAAGAGAGC...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACACGTGCCGTCCTGGTTTaGCGCTTCCTACAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATRAVLV*RFLQIS Trigger: TGAGATCTGTAGGAAGCGCCAAACCAGGACGGCACG...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACACGCCCACCACACACATaGCAGGCACACTTTCGACAT | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATRPPHT*QAHFRH Trigger: ATGTCGAAAGTGTGCCTGCCATGTGTGTGGTGGGCG...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACATTGGGGAGTGGCAATTaGGTGCCAGAGCCCTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATLGSGN*VPEPYC Trigger: ACAATAGGGCTCTGGCACTCAATTGCCACTCCCCAA...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | AGGGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTTGCTCCGGCCATGGATaGCTGCCACATGAGGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGVKKWPAQGTCSFSPAGCSGHG*LPHEAD Trigger: ATCGGCCTCATGTGGCAGGCATCCATGGCCGGAGCA...ACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCAGTAGGCACCGTCGTTaGTCCGGCCATGGATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGLRPQPTPLCNHVSEWRSRHRR*SGHGCL Trigger: CAGGCATCCATGGCCGGAGCAACGACGGTGCCTACT...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACAGGCCCTGTGGACTTCTaGTTGCTTTTGCCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATGPVDF*LLLPVL Trigger: CAAGACAGGCAAAAGCAAGCAGAAGTCCACAGGGCC...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCGGGAGGAGGAAGTaGCTGATGCCATCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLAGRRK*LMPSLP Trigger: AGGCAAAGATGGCATCAGCCACTTCCTCCTCCCGGC...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCACCAGCCAGGACCAATaGGTAGGCACCGTCGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLRPQPTPLCNHVSEWRTSQDQ*VGTVVA Trigger: AGCAACGACGGTGCCTACTCATTGGTCCTGGCTGGT...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACATGGTACGGCCCATCCTaGAGTGAAGTTAGCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATWYGPS*SEVSTS Trigger: TGATGTGCTAACTTCACTTCAGGATGGGCCGTACCA...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACATGTTTTCATCATCCTTaGAGAACCGGCAGGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATCFHHP*RTGRMG Trigger: GCCCATCCTGCCGGTTCTGCAAGGATGATGAAAACA...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | AGGGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCTGCTGTACGCTTGTTaGCAGAGAGGTCTCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGVKKWPAQGTCSFSPAGLLYAC*QRGLGH Trigger: GTGGCCGAGACCTCTCTGGCAACAAGCGTACAGCAG...ACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCTGGTTGAGAATGGTCTaGAAGGGCTGGTTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSEEVASPRHMQLQPSWSWLRMV*KGWFTR Trigger: CCGGGTGAACCAGCCCTTGCAGACCATTCTCAACCA...GGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCGTGCCGTCCTGGTTTaGCGCTTCCTACAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSEEVASPRHMQLQPSWSRAVLV*RFLQIS Trigger: TGAGATCTGTAGGAAGCGCCAAACCAGGACGGCACG...GGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACATGCTTTTGCCTGTCTTaGAAGATGAGGGTCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATCFCLS*KMRVPA Trigger: AGCAGGGACCCTCATCTTCCAAGACAGGCAAAAGCA...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGCGTCCACATACTCATTaGCCTTGTACAGCCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLRPHTH*PCTAPG Trigger: ACCTGGGGCTGTACAAGGTCAATGAGTATGTGGACG...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGGAGGAGGAAGTGGCTaGTGCCATCTTTGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLGGGSG*CHLCLL Trigger: AAGAAGGCAAAGATGGCATCAGCCACTTCCTCCTCC...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | AGGGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTGCTGCCCCTTCACCATaGGTGGACGACTTGTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGVKKWPAQGTCSFSPAGAAPSP*VDDLSD Trigger: ATCAGACAAGTCGTCCACGCATGGTGAAGGGGCAGC...ACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCCCCATGGTATCACAGTaGGAGCACGAGCACGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PGLRPQPTPLCNHVSEWRPMVSQ*EHEHGH Trigger: ATGTCCGTGCTCGTGCTCGCACTGTGATACCATGGG...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACATTGATGAGGTTAGCCTaGTGCTCTGAGAGTGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATLMRLA*CSESVY Trigger: GTACACACTCTCAGAGCAGCAGGCTAACCTCATCAA...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCGCACCTTGGTCAACCTaGACAGAGAGTTCACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSEEVASPRHMQLQPSWSAPWST*TESSRC Trigger: ACACCGTGAACTCTCTGTCCAGGTTGACCAAGGTGC...GGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | AGGGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCGTGCCGTCCTGGTTTaGCGCTTCCTACAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGVKKWPAQGTCSFSPAGRAVLV*RFLQIS Trigger: TGAGATCTGTAGGAAGCGCCAAACCAGGACGGCACG...ACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | AGGGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCGCCCACCACACACATaGCAGGCACACTTTCGACAT | + |
|
Preference number: 4 (lower is better) Translates to: RGVKKWPAQGTCSFSPAGRPPHT*QAHFRH Trigger: ATGTCGAAAGTGTGCCTGCCATGTGTGTGGTGGGCG...ACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGAGAGGGTTGGCCCTGTaGACTTCTGCTTGCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLRGLAL*TSACFC Trigger: GCAAAAGCAAGCAGAAGTCCACAGGGCCAACCCTCT...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | AGGGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTGGAGGAGGAAGTGGCTaGTGCCATCTTTGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGVKKWPAQGTCSFSPAGGGGSG*CHLCLL Trigger: AAGAAGGCAAAGATGGCATCAGCCACTTCCTCCTCC...ACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCGGAGGAGGAAGTGGCTaGTGCCATCTTTGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGLRPQPTPLCNHVSEWRGGGSG*CHLCLL Trigger: AAGAAGGCAAAGATGGCATCAGCCACTTCCTCCTCC...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACACACTCCCTGTGTATGTaGAGTAATTGCCATTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATHSLCM*SNCHCP Trigger: TGGACAATGGCAATTACTTCACATACACAGGGAGTG...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGTTTTTCCTCAGCTCCTaGACCTTGGTCAACCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLFFLSS*TLVNLD Trigger: GTCCAGGTTGACCAAGGTGCAGGAGCTGAGGAAAAA...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGCACATGCCATGCCCTTaGCCCAGTCCCGCCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRHMPCP*PSPAGR Trigger: CCTCCCGGCGGGACTGGGGCAAGGGCATGGCATGTG...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGGGCCCACACATGCCATaGCCTTGCCCCAGTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALSENQAFKVDIQCSVVRGPHMP*PCPSPA Trigger: GGCGGGACTGGGGCAAGGGCATGGCATGTGTGGGCC...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGGCCCACACATGCCATaGCCTTGCCCCAGTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: STQIAARKTCLGFSKMGAGPHMP*PCPSPA Trigger: GGCGGGACTGGGGCAAGGGCATGGCATGTGTGGGCC...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACAGGAGTGGCAATTGAGTaGCAGAGCCCTATTGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATGVAIE*QSPIVI Trigger: AATAACAATAGGGCTCTGGCACTCAATTGCCACTCC...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGTCGAGTGCGGTCCTTaGCCTCCCGGGTCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: STQIAARKTCLGFSKMGAVECGP*PPGSRA Trigger: AGCCCTGGACCCGGGAGGGCAAGGACCGCACTCGAC...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACAACTTCTGCTTGCTTTTaGCTGTCTTGGAAGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPKAHAASAQLVPWPEATTSACF*LSWKMR Trigger: CCTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGT...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCTGCTTTTGCCTGTCTTaGAAGATGAGGGTCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSEEVASPRHMQLQPSWSCFCLS*KMRVPA Trigger: AGCAGGGACCCTCATCTTCCAAGACAGGCAAAAGCA...GGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | AGGGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTAGAGGGTTGGCCCTGTaGACTTCTGCTTGCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGVKKWPAQGTCSFSPAGRGLAL*TSACFC Trigger: GCAAAAGCAAGCAGAAGTCCACAGGGCCAACCCTCT...ACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCTGGCAGCAGATGCACTaGAAAGCCTCTTTCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSEEVASPRHMQLQPSWSWQQMH*KASFTL Trigger: CAAGGTGAAAGAGGCTTTCCAGTGCATCTGCTGCCA...GGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCTGTTTTCATCATCCTTaGAGAACCGGCAGGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLRPQPTPLCNHVSEWRCFHHP*RTGRMG Trigger: GCCCATCCTGCCGGTTCTGCAAGGATGATGAAAACA...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGGGCCCACACATGCCATaGCCTTGCCCCAGTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SALSENQAFKVDIQCSVVGPHMP*PCPSPA Trigger: GGCGGGACTGGGGCAAGGGCATGGCATGTGTGGGCC...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCAAGCCTCTTTCACCTTaGTCAGGAAGATCTGGTACG | + |
|
Preference number: 4 (lower is better) Translates to: GSEEVASPRHMQLQPSWSKPLSP*SGRSGT Trigger: CGTACCAGATCTTCCTGAGCAAGGTGAAAGAGGCTT...GGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | AGGGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTAGAAGCCGCGTTTCCTaGGGTAGTCCACGTTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGVKKWPAQGTCSFSPAGRSRVS*GSPRYS Trigger: ACTATAACGTGGACTACCCCAGGAAACGCGGCTTCT...ACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGGACAGGCTGGGCAGCTaGACACCTGGGCCCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CAVQSACSKWFSFHETHLDRLGS*TPGPGR Trigger: CCTTCCGGGCCCAGGTGTTCAGCTGCCCAGCCTGTC...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCACCGGCCATGGATGCCTaGCACATGAGGCCGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: STQIAARKTCLGFSKMGAPAMDA*HMRPMH Trigger: GTGCATCGGCCTCATGTGGCAGGCATCCATGGCCGG...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGCCGGCCATGGATGCCTaGCACATGAGGCCGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRPAMDA*HMRPMH Trigger: GTGCATCGGCCTCATGTGGCAGGCATCCATGGCCGG...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGAAGATGAGGGTCCCTaGTCCAAGGCCTTGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: STQIAARKTCLGFSKMGAEDEGP*SKALAG Trigger: CCCGGCCAAGGCCTTGGAGCAGGGACCCTCATCTTC...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCCTGTGGACTTCTGCTTaGTTTTGCCTGTCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGLRPQPTPLCNHVSEWRLWTSA*FCLSWK Trigger: CTTCCAAGACAGGCAAAAGCAAGCAGAAGTCCACAG...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCTTGATGAGGTTAGCCTaGTGCTCTGAGAGTGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PGLRPQPTPLCNHVSEWRLMRLA*CSESVY Trigger: GTACACACTCTCAGAGCAGCAGGCTAACCTCATCAA...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAAGGGCAGGAGGGGGTTaGGAGGGGCTAGCGATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: STQIAARKTCLGFSKMGARAGGG*EGLAIK Trigger: TTTGATCGCTAGCCCCTCGCAACCCCCTCCTGCCCT...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001258.15 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGTGCTCCGGCCATGGATaGCTGCCACATGAGGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRCSGHG*LPHEAD Trigger: ATCGGCCTCATGTGGCAGGCATCCATGGCCGGAGCA...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGAGTAGGCACCGTCGTTaGTCCGGCCATGGATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRSRHRR*SGHGCL Trigger: CAGGCATCCATGGCCGGAGCAACGACGGTGCCTACT...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCGGAGTGGCAATTGAGTaGCAGAGCCCTATTGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: PGLRPQPTPLCNHVSEWRGVAIE*QSPIVI Trigger: AATAACAATAGGGCTCTGGCACTCAATTGCCACTCC...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGACAGGCTGGGCAGCTaGACACCTGGGCCCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLDRLGS*TPGPGR Trigger: CCTTCCGGGCCCAGGTGTTCAGCTGCCCAGCCTGTC...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTACACATGCCATGCCCTTaGCCCAGTCCCGCCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLHMPCP*PSPAGR Trigger: CCTCCCGGCGGGACTGGGGCAAGGGCATGGCATGTG...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCACTGCTGTACGCTTGTTaGCAGAGAGGTCTCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: STQIAARKTCLGFSKMGALLYAC*QRGLGH Trigger: GTGGCCGAGACCTCTCTGGCAACAAGCGTACAGCAG...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGGGCAGTGCCAGACTCTaGCGCACGAGCAGCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SALSENQAFKVDIQCSVVGSARL*RTSSWI Trigger: AATCCAGCTGCTCGTGCGCCAGAGTCTGGCACTGCC...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCGGCACACTTTCGACATaGTTTGTTTTCATCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSEEVASPRHMQLQPSWSGTLST*FVFIIL Trigger: AAGGATGATGAAAACAAACCATGTCGAAAGTGTGCC...GGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGGACAGAGGTGAGCGGTaGCTTCAGGCAGTACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRDRGER*LQAVQV Trigger: CACCTGTACTGCCTGAAGCCACCGCTCACCTCTGTC...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGACAGAGGTGAGCGGTaGCTTCAGGCAGTACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: STQIAARKTCLGFSKMGADRGER*LQAVQV Trigger: CACCTGTACTGCCTGAAGCCACCGCTCACCTCTGTC...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGGCCGGGAGGAGGAAGTaGCTGATGCCATCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRAGRRK*LMPSLP Trigger: AGGCAAAGATGGCATCAGCCACTTCCTCCTCCCGGC...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGCGTTATAGTTGGCCATaGCCACCTGACCCACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSENQAFKVDIQCSVVRRYSWP*PPDPPP Trigger: TGGAGGTGGGTCAGGTGGTCATGGCCAACTATAACG...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGCCCATGGTATCACAGTaGGAGCACGAGCACGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: ALSENQAFKVDIQCSVVRPMVSQ*EHEHGH Trigger: ATGTCCGTGCTCGTGCTCGCACTGTGATACCATGGG...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGCCCATGGTATCACAGTaGGAGCACGAGCACGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRPMVSQ*EHEHGH Trigger: ATGTCCGTGCTCGTGCTCGCACTGTGATACCATGGG...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGAGTAGGCACCGTCGTTaGTCCGGCCATGGATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CAVQSACSKWFSFHETHLSRHRR*SGHGCL Trigger: CAGGCATCCATGGCCGGAGCAACGACGGTGCCTACT...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGTGTACCTGGACCACCTaGGCCTCAAACCATGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SALSENQAFKVDIQCSVVCTWTT*ASNHAP Trigger: CGGTGCATGGTTTGAGGCCCAGGTGGTCCAGGTACA...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGGCTCTCTTCTGTACCTaGACCACCTGGGCCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRALFCT*TTWASN Trigger: GTTTGAGGCCCAGGTGGTCCAGGTACAGAAGAGAGC...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGGCCGGGAGGAGGAAGTaGCTGATGCCATCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SALSENQAFKVDIQCSVVAGRRK*LMPSLP Trigger: AGGCAAAGATGGCATCAGCCACTTCCTCCTCCCGGC...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGACCAGCCAGGACCAATaGGTAGGCACCGTCGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CAVQSACSKWFSFHETHLTSQDQ*VGTVVA Trigger: AGCAACGACGGTGCCTACTCATTGGTCCTGGCTGGT...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTACCGGCCATGGATGCCTaGCACATGAGGCCGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLPAMDA*HMRPMH Trigger: GTGCATCGGCCTCATGTGGCAGGCATCCATGGCCGG...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGAAGATGAGGGTCCCTaGTCCAAGGCCTTGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLEDEGP*SKALAG Trigger: CCCGGCCAAGGCCTTGGAGCAGGGACCCTCATCTTC...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGGGCCCTGTGGACTTCTaGTTGCTTTTGCCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALSENQAFKVDIQCSVVRGPVDF*LLLPVL Trigger: CAAGACAGGCAAAAGCAAGCAGAAGTCCACAGGGCC...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGGCTCCTGGCAGCAGATaGACTGGAAAGCCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRAPGSR*TGKPLS Trigger: TGAAAGAGGCTTTCCAGTGCATCTGCTGCCAGGAGC...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGGCTCCTGGCAGCAGATaGACTGGAAAGCCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSENQAFKVDIQCSVVRAPGSR*TGKPLS Trigger: TGAAAGAGGCTTTCCAGTGCATCTGCTGCCAGGAGC...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGCACCTTGGTCAACCTaGACAGAGAGTTCACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: STQIAARKTCLGFSKMGAAPWST*TESSRC Trigger: ACACCGTGAACTCTCTGTCCAGGTTGACCAAGGTGC...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGGCACCTTGGTCAACCTaGACAGAGAGTTCACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALSENQAFKVDIQCSVVRAPWST*TESSRC Trigger: ACACCGTGAACTCTCTGTCCAGGTTGACCAAGGTGC...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGTGTACCTGGACCACCTaGGCCTCAAACCATGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: CAVQSACSKWFSFHETHLCTWTT*ASNHAP Trigger: CGGTGCATGGTTTGAGGCCCAGGTGGTCCAGGTACA...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGGCTCTCTTCTGTACCTaGACCACCTGGGCCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SALSENQAFKVDIQCSVVALFCT*TTWASN Trigger: GTTTGAGGCCCAGGTGGTCCAGGTACAGAAGAGAGC...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGGACAGAGGTGAGCGGTaGCTTCAGGCAGTACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CAVQSACSKWFSFHETHLDRGER*LQAVQV Trigger: CACCTGTACTGCCTGAAGCCACCGCTCACCTCTGTC...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAAGAGGGTTGGCCCTGTaGACTTCTGCTTGCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: STQIAARKTCLGFSKMGARGLAL*TSACFC Trigger: GCAAAAGCAAGCAGAAGTCCACAGGGCCAACCCTCT...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGCGTCCACATACTCATTaGCCTTGTACAGCCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SALSENQAFKVDIQCSVVRPHTH*PCTAPG Trigger: ACCTGGGGCTGTACAAGGTCAATGAGTATGTGGACG...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGTTGGGGAGTGGCAATTaGGTGCCAGAGCCCTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SALSENQAFKVDIQCSVVLGSGN*VPEPYC Trigger: ACAATAGGGCTCTGGCACTCAATTGCCACTCCCCAA...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGTTTTTCCTCAGCTCCTaGACCTTGGTCAACCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALSENQAFKVDIQCSVVRFFLSS*TLVNLD Trigger: GTCCAGGTTGACCAAGGTGCAGGAGCTGAGGAAAAA...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAAGTAGGCACCGTCGTTaGTCCGGCCATGGATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLSRHRR*SGHGCL Trigger: CAGGCATCCATGGCCGGAGCAACGACGGTGCCTACT...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGGCTCCTGGCAGCAGATaGACTGGAAAGCCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SALSENQAFKVDIQCSVVAPGSR*TGKPLS Trigger: TGAAAGAGGCTTTCCAGTGCATCTGCTGCCAGGAGC...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGTGGTTGAGAATGGTCTaGAAGGGCTGGTTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CAVQSACSKWFSFHETHLWLRMV*KGWFTR Trigger: CCGGGTGAACCAGCCCTTGCAGACCATTCTCAACCA...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGGCAGTGCCAGACTCTaGCGCACGAGCAGCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLGSARL*RTSSWI Trigger: AATCCAGCTGCTCGTGCGCCAGAGTCTGGCACTGCC...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGAGAAGCCGCGTTTCCTaGGGTAGTCCACGTTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRRSRVS*GSPRYS Trigger: ACTATAACGTGGACTACCCCAGGAAACGCGGCTTCT...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCATGCTTTTGCCTGTCTTaGAAGATGAGGGTCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: STQIAARKTCLGFSKMGACFCLS*KMRVPA Trigger: AGCAGGGACCCTCATCTTCCAAGACAGGCAAAAGCA...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGAGGGTTGGCCCTGTaGACTTCTGCTTGCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SALSENQAFKVDIQCSVVRGLAL*TSACFC Trigger: GCAAAAGCAAGCAGAAGTCCACAGGGCCAACCCTCT...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGTGGCAGCAGATGCACTaGAAAGCCTCTTTCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRWQQMH*KASFTL Trigger: CAAGGTGAAAGAGGCTTTCCAGTGCATCTGCTGCCA...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGGGAGGAGGAAGTGGCTaGTGCCATCTTTGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CAVQSACSKWFSFHETHLGGGSG*CHLCLL Trigger: AAGAAGGCAAAGATGGCATCAGCCACTTCCTCCTCC...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAACCAGCCAGGACCAATaGGTAGGCACCGTCGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLTSQDQ*VGTVVA Trigger: AGCAACGACGGTGCCTACTCATTGGTCCTGGCTGGT...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGTTTTTCCTCAGCTCCTaGACCTTGGTCAACCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SALSENQAFKVDIQCSVVFFLSS*TLVNLD Trigger: GTCCAGGTTGACCAAGGTGCAGGAGCTGAGGAAAAA...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTACTGCTGTACGCTTGTTaGCAGAGAGGTCTCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLLLYAC*QRGLGH Trigger: GTGGCCGAGACCTCTCTGGCAACAAGCGTACAGCAG...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTGAAGATGAGGGTCCCTaGTCCAAGGCCTTGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLEDEGP*SKALAG Trigger: CCCGGCCAAGGCCTTGGAGCAGGGACCCTCATCTTC...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGCTGTGGACTTCTGCTTaGTTTTGCCTGTCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALSENQAFKVDIQCSVVRLWTSA*FCLSWK Trigger: CTTCCAAGACAGGCAAAAGCAAGCAGAAGTCCACAG...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGCTGTGGACTTCTGCTTaGTTTTGCCTGTCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRLWTSA*FCLSWK Trigger: CTTCCAAGACAGGCAAAAGCAAGCAGAAGTCCACAG...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGGGCCCTGTGGACTTCTaGTTGCTTTTGCCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CAVQSACSKWFSFHETHLGPVDF*LLLPVL Trigger: CAAGACAGGCAAAAGCAAGCAGAAGTCCACAGGGCC...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGAAGCCTCTTTCACCTTaGTCAGGAAGATCTGGTACG | + |
|
Preference number: 4 (lower is better) Translates to: ALSENQAFKVDIQCSVVRKPLSP*SGRSGT Trigger: CGTACCAGATCTTCCTGAGCAAGGTGAAAGAGGCTT...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGCCGGGAGGAGGAAGTaGCTGATGCCATCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLAGRRK*LMPSLP Trigger: AGGCAAAGATGGCATCAGCCACTTCCTCCTCCCGGC...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTACGTTATAGTTGGCCATaGCCACCTGACCCACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLRYSWP*PPDPPP Trigger: TGGAGGTGGGTCAGGTGGTCATGGCCAACTATAACG...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGCACTCCCTGTGTATGTaGAGTAATTGCCATTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSENQAFKVDIQCSVVRHSLCM*SNCHCP Trigger: TGGACAATGGCAATTACTTCACATACACAGGGAGTG...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGTGGTACGGCCCATCCTaGAGTGAAGTTAGCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: CAVQSACSKWFSFHETHLWYGPS*SEVSTS Trigger: TGATGTGCTAACTTCACTTCAGGATGGGCCGTACCA...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTAGGGCAGGAGGGGGTTaGGAGGGGCTAGCGATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLRAGGG*EGLAIK Trigger: TTTGATCGCTAGCCCCTCGCAACCCCCTCCTGCCCT...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001258.15 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGTGTTTTCATCATCCTTaGAGAACCGGCAGGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CAVQSACSKWFSFHETHLCFHHP*RTGRMG Trigger: GCCCATCCTGCCGGTTCTGCAAGGATGATGAAAACA...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGGGAGTGGCAATTGAGTaGCAGAGCCCTATTGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRGVAIE*QSPIVI Trigger: AATAACAATAGGGCTCTGGCACTCAATTGCCACTCC...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGGGAGTGGCAATTGAGTaGCAGAGCCCTATTGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: ALSENQAFKVDIQCSVVRGVAIE*QSPIVI Trigger: AATAACAATAGGGCTCTGGCACTCAATTGCCACTCC...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGACTTCTGCTTGCTTTTaGCTGTCTTGGAAGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALSENQAFKVDIQCSVVRTSACF*LSWKMR Trigger: CCTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGT...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGACTTCTGCTTGCTTTTaGCTGTCTTGGAAGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRTSACF*LSWKMR Trigger: CCTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGT...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGCTCTCTTCTGTACCTaGACCACCTGGGCCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLALFCT*TTWASN Trigger: GTTTGAGGCCCAGGTGGTCCAGGTACAGAAGAGAGC...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGAGAAGCCGCGTTTCCTaGGGTAGTCCACGTTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: CAVQSACSKWFSFHETHLRSRVS*GSPRYS Trigger: ACTATAACGTGGACTACCCCAGGAAACGCGGCTTCT...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTACGCCCACCACACACATaGCAGGCACACTTTCGACAT | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLRPPHT*QAHFRH Trigger: ATGTCGAAAGTGTGCCTGCCATGTGTGTGGTGGGCG...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTACCAGCCAGGACCAATaGGTAGGCACCGTCGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLTSQDQ*VGTVVA Trigger: AGCAACGACGGTGCCTACTCATTGGTCCTGGCTGGT...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGCTGTGGACTTCTGCTTaGTTTTGCCTGTCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CAVQSACSKWFSFHETHLLWTSA*FCLSWK Trigger: CTTCCAAGACAGGCAAAAGCAAGCAGAAGTCCACAG...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGTTGATGAGGTTAGCCTaGTGCTCTGAGAGTGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CAVQSACSKWFSFHETHLLMRLA*CSESVY Trigger: GTACACACTCTCAGAGCAGCAGGCTAACCTCATCAA...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTTGTACCTGGACCACCTaGGCCTCAAACCATGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLCTWTT*ASNHAP Trigger: CGGTGCATGGTTTGAGGCCCAGGTGGTCCAGGTACA...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTCCCATGGTATCACAGTaGGAGCACGAGCACGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLPMVSQ*EHEHGH Trigger: ATGTCCGTGCTCGTGCTCGCACTGTGATACCATGGG...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTTGGTTGAGAATGGTCTaGAAGGGCTGGTTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLWLRMV*KGWFTR Trigger: CCGGGTGAACCAGCCCTTGCAGACCATTCTCAACCA...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTCGTGCCGTCCTGGTTTaGCGCTTCCTACAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLRAVLV*RFLQIS Trigger: TGAGATCTGTAGGAAGCGCCAAACCAGGACGGCACG...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGGGCACACTTTCGACATaGTTTGTTTTCATCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALSENQAFKVDIQCSVVRGTLST*FVFIIL Trigger: AAGGATGATGAAAACAAACCATGTCGAAAGTGTGCC...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTCGCCCACCACACACATaGCAGGCACACTTTCGACAT | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLRPPHT*QAHFRH Trigger: ATGTCGAAAGTGTGCCTGCCATGTGTGTGGTGGGCG...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTATGGCAGCAGATGCACTaGAAAGCCTCTTTCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLWQQMH*KASFTL Trigger: CAAGGTGAAAGAGGCTTTCCAGTGCATCTGCTGCCA...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTCGTCCACATACTCATTaGCCTTGTACAGCCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLRPHTH*PCTAPG Trigger: ACCTGGGGCTGTACAAGGTCAATGAGTATGTGGACG...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTTTGGGGAGTGGCAATTaGGTGCCAGAGCCCTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLLGSGN*VPEPYC Trigger: ACAATAGGGCTCTGGCACTCAATTGCCACTCCCCAA...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTGGCCCTGTGGACTTCTaGTTGCTTTTGCCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLGPVDF*LLLPVL Trigger: CAAGACAGGCAAAAGCAAGCAGAAGTCCACAGGGCC...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTATTGATGAGGTTAGCCTaGTGCTCTGAGAGTGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLLMRLA*CSESVY Trigger: GTACACACTCTCAGAGCAGCAGGCTAACCTCATCAA...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTGCTCCTGGCAGCAGATaGACTGGAAAGCCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLAPGSR*TGKPLS Trigger: TGAAAGAGGCTTTCCAGTGCATCTGCTGCCAGGAGC...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTACACTCCCTGTGTATGTaGAGTAATTGCCATTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLHSLCM*SNCHCP Trigger: TGGACAATGGCAATTACTTCACATACACAGGGAGTG...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR TCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTTGGTACGGCCCATCCTaGAGTGAAGTTAGCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLWYGPS*SEVSTS Trigger: TGATGTGCTAACTTCACTTCAGGATGGGCCGTACCA...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTTTTTTCCTCAGCTCCTaGACCTTGGTCAACCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLFFLSS*TLVNLD Trigger: GTCCAGGTTGACCAAGGTGCAGGAGCTGAGGAAAAA...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTAGAAGCCGCGTTTCCTaGGGTAGTCCACGTTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLRSRVS*GSPRYS Trigger: ACTATAACGTGGACTACCCCAGGAAACGCGGCTTCT...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR GCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTACTTCTGCTTGCTTTTaGCTGTCTTGGAAGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLTSACF*LSWKMR Trigger: CCTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGT...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CCA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTGGCACACTTTCGACATaGTTTGTTTTCATCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VQAVTTKEIHRGNPFISLGTLST*FVFIIL Trigger: AAGGATGATGAAAACAAACCATGTCGAAAGTGTGCC...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| 3UTR CAA 72 bp | AAATGGTTTAGTTTCCATGAGACACACCTGCACACTTaGGTAAAGTTACAAAAGAAACAAAACCTACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KWFSFHETHLHT*VKLQKKQNLPR Trigger: CCTTGGTAGGTTTTGTTTCTTTTGTAACTTTACCAAAGTGTGCAGGTGTGTCTCATGGAAACTAAACCATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS GCA 90 bp | GGATGGGCCCGAAGTGGTTGGCGGGCACAATGGTACACTCTGTGGTaGGGCCCACACATGCCATGCCCTTGCCCCAGTCCCGCCGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWARSGWRAQWYTLW*GPHMPCPCPSPAGR Trigger: CCTCCCGGCGGGACTGGGGCAAGGGCATGGCATGTGTGGGCCGCACCACAGAGTGTACCATTGTGCCCGCCAACCACTTCGGGCCCATCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCTGGTTCACCCGGGTaGGGGAGCTGTGGTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLAGSPG*GSCGPA Trigger: AGCTGGACCACAGCTCCCCAACCCGGGTGAACCAGC...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACACTCAGCTCCTGCACCTaGGTCAACCTGGACAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QPKAHAASAQLVPWPEATLSSCT*VNLDRE Trigger: CTCTCTGTCCAGGTTGACCAAGGTGCAGGAGCTGAG...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | AGGGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTGAGGGCAGGAGGGGGTaGCGAGGGGCTAGCGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: RGVKKWPAQGTCSFSPAGEGRRG*RGASDQ Trigger: TTGATCGCTAGCCCCTCGCAACCCCCTCCTGCCCTC...ACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001258.15 ENSMUST00000113039.9 |
||
| CDS TCA 90 bp | GGGTTGGGGAGCTGTGGTCCAGCTCAAAGCGACAGGCTGGGCAGCTaGACACCTGGGCCCGGAAGGACCTGTCCAGACAGTCCTTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GLGSCGPAQSDRLGS*TPGPGRTCPDSPYR Trigger: TCTGTAAGGACTGTCTGGACAGGTCCTTCCGGGCCCAGGTGTTCAGCTGCCCAGCCTGTCGCTTTGAGCTGGACCACAGCTCCCCAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | GGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCACGTGCCGTCCTGGTTaGGCGCTTCCTACAGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSEEVASPRHMQLQPSWSTCRPG*ALPTDL Trigger: GAGATCTGTAGGAAGCGCCAAACCAGGACGGCACGT...GGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACATTCCTGCTCTTCTCCTaGTTAGCCAAGGCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QPKAHAASAQLVPWPEATFLLFS*LAKASK Trigger: CTTGGAGGCCTTGGCTAACAAGGAGAAGAGCAGGAA...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS TCA 90 bp | GGTTGGCCCTGTGGACTTCTGCTTGCTTTTGCCTGTCTTGGAAGATaGGGGTCCCTGCTCCAAGGCCTTGGCCGGGCGCTTCCTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GWPCGLLLAFACLGR*GSLLQGLGRALPAL Trigger: AAGAGCAGGAAGCGCCCGGCCAAGGCCTTGGAGCAGGGACCCTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGTCCACAGGGCCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | CCTGGCCTGAGGCCACAGCCAACTCCCCTCTGCAATCATGTCAGTGAATGGCGCCTCAGCTCCTGCACCTaGGTCAACCTGGACAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGLRPQPTPLCNHVSEWRLSSCT*VNLDRE Trigger: CTCTCTGTCCAGGTTGACCAAGGTGCAGGAGCTGAG...GCGCCATTCACTGACATGATTGCAGAGGGGAGTTGGCTGTGGCCTCAGGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | GTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGTTCCTGCTCTTCTCCTaGTTAGCCAAGGCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VKKWPAQGTCSFSPAGPLFLLFS*LAKASK Trigger: CTTGGAGGCCTTGGCTAACAAGGAGAAGAGCAGGAA...CAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCCCTGGCCTGAGGCCACAGACTTCTGCTTGCTTTaGCCTGTCTTGGAAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: QPKAHAASAQLVPWPEATDFCLL*PVLEDE Trigger: CTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGTC...TGTGGCCTCAGGCCAGGGGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS GCA 90 bp | TTCTTAGAGGCACGGGGGCTGGAGAGGGTTGGCCCTGTGGACTTCTaGTTGCTTTTGCCTGTCTTGGAAGATGAGGGTCCCTGCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLEARGLERVGPVDF*LLLPVLEDEGPCSK Trigger: CTTGGAGCAGGGACCCTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGTCCACAGGGCCAACCCTCTCCAGCCCCCGTGCCTCTAAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS TCA 90 bp | ACCAGAAGCCGCGTTTCCTGGGGTAGTCCACGTTATAGTTGGCCATaGCCACCTGACCCACCTCCAGGTTCTCCCATGGTATCACAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TRSRVSWGSPRYSWP*PPDPPPGSPMVSQC Trigger: GCACTGTGATACCATGGGAGAACCTGGAGGTGGGTCAGGTGGTCATGGCCAACTATAACGTGGACTACCCCAGGAAACGCGGCTTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CCA 90 bp | CAGGGCTCGTCCTCAGATAGGGCTCTCTTCTGTACCTGGACCACCTaGGCCTCAAACCATGCACCGAAGATATTGTCACGCACGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QGSSSDRALFCTWTT*ASNHAPKILSRTST Trigger: TGTGGACGTGCGTGACAATATCTTCGGTGCATGGTTTGAGGCCCAGGTGGTCCAGGTACAGAAGAGAGCCCTATCTGAGGACGAGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CCA 90 bp | CTGGAGCTACAGGGCTCGTCCTCAGATAGGGCTCTCTTCTGTACCTaGACCACCTGGGCCTCAAACCATGCACCGAAGATATTGTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: LELQGSSSDRALFCT*TTWASNHAPKILSR Trigger: GCGTGACAATATCTTCGGTGCATGGTTTGAGGCCCAGGTGGTCCAGGTACAGAAGAGAGCCCTATCTGAGGACGAGCCCTGTAGCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | GGGAGTGAAGAAGTGGCCAGCCCAAGGCACATGCAGCTTCAGCCCAGCTGGTCCGACTTCTGCTTGCTTTaGCCTGTCTTGGAAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSEEVASPRHMQLQPSWSDFCLL*PVLEDE Trigger: CTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGTC...GGACCAGCTGGGCTGAAGCTGCATGTGCCTTGGGCTGGCCACTTCTTCACTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGCTGGTTCACCCGGGTaGGGGAGCTGTGGTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: STQIAARKTCLGFSKMGAAGSPG*GSCGPA Trigger: AGCTGGACCACAGCTCCCCAACCCGGGTGAACCAGC...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| CDS GCA 90 bp | ACACATGGCAGGCACACTTTCGACATGGTTTGTTTTCATCATCCTTaGAGAACCGGCAGGATGGGCCGCTCTTCCCTGTGTTCCGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: THGRHTFDMVCFHHP*RTGRMGRSSLCSGG Trigger: CCCTCCGGAACACAGGGAAGAGCGGCCCATCCTGCCGGTTCTGCAAGGATGATGAAAACAAACCATGTCGAAAGTGTGCCTGCCATGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001258.15 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGGAGGGCAGGAGGGGGTaGCGAGGGGCTAGCGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SALSENQAFKVDIQCSVVEGRRG*RGASDQ Trigger: TTGATCGCTAGCCCCTCGCAACCCCCTCCTGCCCTC...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001258.15 ENSMUST00000113039.9 |
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| CDS CCA 90 bp | GTTATAGTTGGCCATGACCACCTGACCCACCTCCAGGTTCTCCCATaGTATCACAGTGCGAGCACGAGCACGGACATTCTTGGCTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VIVGHDHLTHLQVLP*YHSASTSTDILGFD Trigger: GTCAAAGCCAAGAATGTCCGTGCTCGTGCTCGCACTGTGATACCATGGGAGAACCTGGAGGTGGGTCAGGTGGTCATGGCCAACTATAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGGCTGGTTCACCCGGGTaGGGGAGCTGTGGTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CAVQSACSKWFSFHETHLAGSPG*GSCGPA Trigger: AGCTGGACCACAGCTCCCCAACCCGGGTGAACCAGC...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| CDS-3UTR CAA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGCTCAGCTCCTGCACCTaGGTCAACCTGGACAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRLSSCT*VNLDRE Trigger: CTCTCTGTCCAGGTTGACCAAGGTGCAGGAGCTGAG...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| CDS TCA 90 bp | CAAACCATGCACCGAAGATATTGTCACGCACGTCCACATACTCATTaGCCTTGTACAGCCCCAGGTCCGTGTCCTCCCACACAGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QTMHRRYCHARPHTH*PCTAPGPCPPTQSC Trigger: ACAAGACTGTGTGGGAGGACACGGACCTGGGGCTGTACAAGGTCAATGAGTATGTGGACGTGCGTGACAATATCTTCGGTGCATGGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| CDS TCA 90 bp | TACGCTTGTTGCCAGAGAGGTCTCGGCCACCACTCCCTGTGTATGTaGAGTAATTGCCATTGTCCACATCATCCTCATAGCCACCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YACCQRGLGHHSLCM*SNCHCPHHPHSHQP Trigger: TGGCTGGTGGCTATGAGGATGATGTGGACAATGGCAATTACTTCACATACACAGGGAGTGGTGGCCGAGACCTCTCTGGCAACAAGCGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| CDS CCA 90 bp | TTCAAGAGCCTGATGTTGCCGTATAGCTCACGTGCCGTCCTGGTTTaGCGCTTCCTACAGATCTCAACATCATACCAGAAGCCGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FKSLMLPYSSRAVLV*RFLQISTSYQKPRF Trigger: GAAACGCGGCTTCTGGTATGATGTTGAGATCTGTAGGAAGCGCCAAACCAGGACGGCACGTGAGCTATACGGCAACATCAGGCTCTTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | AGTGCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGACGTGCCGTCCTGGTTaGGCGCTTCCTACAGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SALSENQAFKVDIQCSVVTCRPG*ALPTDL Trigger: GAGATCTGTAGGAAGCGCCAAACCAGGACGGCACGT...CACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGCTCAGCTCCTGCACCTaGGTCAACCTGGACAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CAVQSACSKWFSFHETHLLSSCT*VNLDRE Trigger: CTCTCTGTCCAGGTTGACCAAGGTGCAGGAGCTGAG...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAACGTCCACATACTCATaGACCTTGTACAGCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: STQIAARKTCLGFSKMGATSTYS*TLYSPR Trigger: CCTGGGGCTGTACAAGGTCAATGAGTATGTGGACGT...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | TGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAGTTTCCATGAGACACACCTGACGTGCCGTCCTGGTTaGGCGCTTCCTACAGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: CAVQSACSKWFSFHETHLTCRPG*ALPTDL Trigger: GAGATCTGTAGGAAGCGCCAAACCAGGACGGCACGT...CAGGTGTGTCTCATGGAAACTAAACCATTTACTACAGGCAGACTGGACAGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | AGCACACAGATAGCTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCATTCCTGCTCTTCTCCTaGTTAGCCAAGGCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: STQIAARKTCLGFSKMGAFLLFS*LAKASK Trigger: CTTGGAGGCCTTGGCTAACAAGGAGAAGAGCAGGAA...TGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAGCTATCTGTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGTTCCTGCTCTTCTCCTaGTTAGCCAAGGCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRFLLFS*LAKASK Trigger: CTTGGAGGCCTTGGCTAACAAGGAGAAGAGCAGGAA...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | GTACAGGCTGTAACTACAAAAGAAATTCATCGAGGAAACCCATTTATCTCGCTTGCTGGTTCACCCGGGTaGGGGAGCTGTGGTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VQAVTTKEIHRGNPFISLAGSPG*GSCGPA Trigger: AGCTGGACCACAGCTCCCCAACCCGGGTGAACCAGC...AAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACAGCCTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | CAAAACACAACCCTTAGAACTGTGCTGTCCAGTCTGCCTGTAGTAAATGGTTTAACGTGCCGTCCTGGTTaGGCGCTTCCTACAGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: QNTTLRTVLSSLPVVNGLTCRPG*ALPTDL Trigger: GAGATCTGTAGGAAGCGCCAAACCAGGACGGCACGT...TAAACCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGGAAGACATGTCTGGGCTTTTCAAAGATGGGTGCAGATGGTTTCTAGGGACTTCTGCTTGCTTTaGCCTGTCTTGGAAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPGRHVWAFQRWVQMVSRDFCLL*PVLEDE Trigger: CTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGTC...CCTAGAAACCATCTGCACCCATCTTTGAAAAGCCCAGACATGTCTTCCTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS-3UTR CAA 90 bp | GCACTCTCTGAAAACCAGGCTTTCAAGGTAGACATCCAATGCTCAGTGGTGAGGGACTTCTGCTTGCTTTaGCCTGTCTTGGAAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALSENQAFKVDIQCSVVRDFCLL*PVLEDE Trigger: CTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGTC...CCTCACCACTGAGCATTGGATGTCTACCTTGAAAGCCTGGTTTTCAGAGAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS TCA 90 bp | ATCATCAAGACTTCATCCACAAACATGATCCGACAGTTGTTGAGCTaGGAGTCATTCAAGAGCCTGATGTTGCCGTATAGCTCACGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IIKTSSTNMIRQLLS*ESFKSLMLPYSSRA Trigger: GGCACGTGAGCTATACGGCAACATCAGGCTCTTGAATGACTCTCAGCTCAACAACTGTCGGATCATGTTTGTGGATGAAGTCTTGATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 90 bp | GCAGGATGGGCCGCTCTTCCCTGTGTTCCGGAGGGCAGGAGGGGGTaGCGAGGGGCTAGCGATCAAAGGCCTCCTCTCTTTAGGGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AGWAALPCVPEGRRG*RGASDQRPPLFREL Trigger: GAGCTCCCTAAAGAGAGGAGGCCTTTGATCGCTAGCCCCTCGCAACCCCCTCCTGCCCTCCGGAACACAGGGAAGAGCGGCCCATCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001258.15 ENSMUST00000113039.9 |
||
| CDS GCA 72 bp | CGAAGTGGTTGGCGGGCACAATGGTACACTCTGTGGTaGGGCCCACACATGCCATGCCCTTGCCCCAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RSGWRAQWYTLW*GPHMPCPCPSP Trigger: GGGACTGGGGCAAGGGCATGGCATGTGTGGGCCGCACCACAGAGTGTACCATTGTGCCCGCCAACCACTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CCA 72 bp | GTGTTTCCCGCCCTTCATGTTCCGGACCACACGCACTaGCTTCCCTTGGCGCCAGTCTTCAGCCTCCGCACC | + |
|
Preference number: 6 (lower is better) Translates to: VFPALHVPDHTH*LPLAPVFSLRT Trigger: GGTGCGGAGGCTGAAGACTGGCGCCAAGGGAAGCCAGTGCGTGTGGTCCGGAACATGAAGGGCGGGAAACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 72 bp | TACTGCATAGTGAGCCCCAGCTGTCGAGTGCGGTCCTaGCCCTCCCGGGTCCAGGGCTCAGGCTCTGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: YCIVSPSCRVRS*PSRVQGSGSVS Trigger: TGACACAGAGCCTGAGCCCTGGACCCGGGAGGGCAAGGACCGCACTCGACAGCTGGGGCTCACTATGCAGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 90 bp | CCTTCAGGGTACTGCATAGTGAGCCCCAGCTGTCGAGTGCGGTCCTaGCCCTCCCGGGTCCAGGGCTCAGGCTCTGTGTCATCTCGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: PSGYCIVSPSCRVRS*PSRVQGSGSVSSRR Trigger: TCGACGAGATGACACAGAGCCTGAGCCCTGGACCCGGGAGGGCAAGGACCGCACTCGACAGCTGGGGCTCACTATGCAGTACCCTGAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS TCA 72 bp | AGCTGTGGTCCAGCTCAAAGCGACAGGCTGGGCAGCTaGACACCTGGGCCCGGAAGGACCTGTCCAGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: SCGPAQSDRLGS*TPGPGRTCPDS Trigger: ACTGTCTGGACAGGTCCTTCCGGGCCCAGGTGTTCAGCTGCCCAGCCTGTCGCTTTGAGCTGGACCACAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 90 bp | CTGGAGAGGGTTGGCCCTGTGGACTTCTGCTTGCTTTTGCCTGTCTaGGAAGATGAGGGTCCCTGCTCCAAGGCCTTGGCCGGGCGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LERVGPVDFCLLLPV*EDEGPCSKALAGRF Trigger: GAAGCGCCCGGCCAAGGCCTTGGAGCAGGGACCCTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGTCCACAGGGCCAACCCTCTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS TCA 72 bp | CTCCTTCAGCTTCTCCCCTGCTTGTACCACCTCACTTaGGTCAGTGCGGCAGCTGGGGCAGTACCACTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLQLLPCLYHLT*VSAAAGAVPLR Trigger: CCGGAGTGGTACTGCCCCAGCTGCCGCACTGACTCAAGTGAGGTGGTACAAGCAGGGGAGAAGCTGAAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 72 bp | GTGAGCTTCTGGTCAGAGGACTGGCCTGCTGTACGCTaGTTGCCAGAGAGGTCTCGGCCACCACTCCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VSFWSEDWPAVR*LPERSRPPLPV Trigger: CACAGGGAGTGGTGGCCGAGACCTCTCTGGCAACAAGCGTACAGCAGGCCAGTCCTCTGACCAGAAGCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 72 bp | CCTGTCTTGGAAGATGAGGGTCCCTGCTCCAAGGCCTaGGCCGGGCGCTTCCTGCTCTTCTCCTTGTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PVLEDEGPCSKA*AGRFLLFSLLA Trigger: GGCTAACAAGGAGAAGAGCAGGAAGCGCCCGGCCAAGGCCTTGGAGCAGGGACCCTCATCTTCCAAGACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 72 bp | CGGGGGCTGGAGAGGGTTGGCCCTGTGGACTTCTGCTaGCTTTTGCCTGTCTTGGAAGATGAGGGTCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RGLERVGPVDFC*LLPVLEDEGPC Trigger: GCAGGGACCCTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGTCCACAGGGCCAACCCTCTCCAGCCCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS GCA 72 bp | TGCTTGCTTTTGCCTGTCTTGGAAGATGAGGGTCCCTaGTCCAAGGCCTTGGCCGGGCGCTTCCTGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CLLLPVLEDEGP*SKALAGRFLLF Trigger: GAAGAGCAGGAAGCGCCCGGCCAAGGCCTTGGAGCAGGGACCCTCATCTTCCAAGACAGGCAAAAGCAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS GCA 72 bp | GGGGGCTGGAGAGGGTTGGCCCTGTGGACTTCTGCTTaGTTTTGCCTGTCTTGGAAGATGAGGGTCCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GGWRGLALWTSA*FCLSWKMRVPA Trigger: AGCAGGGACCCTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGTCCACAGGGCCAACCCTCTCCAGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CCA 72 bp | CCCTTCATGTTCCGGACCACACGCACTGGCTTCCCTTaGCGCCAGTCTTCAGCCTCCGCACCTTTCTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: PFMFRTTRTGFP*RQSSASAPFSL Trigger: CAATGAGAAAGGTGCGGAGGCTGAAGACTGGCGCCAAGGGAAGCCAGTGCGTGTGGTCCGGAACATGAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 72 bp | TCTCCTTCAGCTTCTCCCCTGCTTGTACCACCTCACTaGAGTCAGTGCGGCAGCTGGGGCAGTACCACTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SPSASPLLVPPH*SQCGSWGSTTP Trigger: CGGAGTGGTACTGCCCCAGCTGCCGCACTGACTCAAGTGAGGTGGTACAAGCAGGGGAGAAGCTGAAGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 90 bp | TTGCTTTTGCCTGTCTTGGAAGATGAGGGTCCCTGCTCCAAGGCCTaGGCCGGGCGCTTCCTGCTCTTCTCCTTGTTAGCCAAGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLLPVLEDEGPCSKA*AGRFLLFSLLAKAS Trigger: GGAGGCCTTGGCTAACAAGGAGAAGAGCAGGAAGCGCCCGGCCAAGGCCTTGGAGCAGGGACCCTCATCTTCCAAGACAGGCAAAAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 90 bp | TCATTGACCTTGTACAGCCCCAGGTCCGTGTCCTCCCACACAGTCTaGTCATCCGCTTCAGCTGCCCCTTCACCATGCGTGGACGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLTLYSPRSVSSHTV*SSASAAPSPCVDDL Trigger: CAAGTCGTCCACGCATGGTGAAGGGGCAGCTGAAGCGGATGACAAGACTGTGTGGGAGGACACGGACCTGGGGCTGTACAAGGTCAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 ENSMUST00000142387.2 |
||
| CDS TCA 72 bp | TGTGGACTTCTGCTTGCTTTTGCCTGTCTTGGAAGATaGGGGTCCCTGCTCCAAGGCCTTGGCCGGGCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CGLLLAFACLGR*GSLLQGLGRAL Trigger: AAGCGCCCGGCCAAGGCCTTGGAGCAGGGACCCTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGTCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CCA 72 bp | GGCCATGACCACCTGACCCACCTCCAGGTTCTCCCATaGTATCACAGTGCGAGCACGAGCACGGACATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GHDHLTHLQVLP*YHSASTSTDIL Trigger: AAGAATGTCCGTGCTCGTGCTCGCACTGTGATACCATGGGAGAACCTGGAGGTGGGTCAGGTGGTCATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CCA 72 bp | TTGGCCCTGTGGACTTCTGCTTGCTTTTGCCTGTCTTaGAAGATGAGGGTCCCTGCTCCAAGGCCTTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LALWTSACFCLS*KMRVPAPRPWP Trigger: CGGCCAAGGCCTTGGAGCAGGGACCCTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGTCCACAGGGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 72 bp | AGCTTCTGGTCAGAGGACTGGCCTGCTGTACGCTTGTaGCCAGAGAGGTCTCGGCCACCACTCCCTGTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SFWSEDWPAVRL*PERSRPPLPVY Trigger: ATACACAGGGAGTGGTGGCCGAGACCTCTCTGGCAACAAGCGTACAGCAGGCCAGTCCTCTGACCAGAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 72 bp | GTTGGCCCTGTGGACTTCTGCTTGCTTTTGCCTGTCTaGGAAGATGAGGGTCCCTGCTCCAAGGCCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VGPVDFCLLLPV*EDEGPCSKALA Trigger: GGCCAAGGCCTTGGAGCAGGGACCCTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGTCCACAGGGCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 72 bp | TTAGCCTGCTGCTCTGAGAGTGTGTACGGCTCCAGCTaGCTCTTCTTAGAGGCACGGGGGCTGGAGAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LACCSESVYGSS*LFLEARGLERV Trigger: AACCCTCTCCAGCCCCCGTGCCTCTAAGAAGAGCAAGCTGGAGCCGTACACACTCTCAGAGCAGCAGGCTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS TCA 72 bp | CGCGTTTCCTGGGGTAGTCCACGTTATAGTTGGCCATaGCCACCTGACCCACCTCCAGGTTCTCCCATGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RVSWGSPRYSWP*PPDPPPGSPMV Trigger: TACCATGGGAGAACCTGGAGGTGGGTCAGGTGGTCATGGCCAACTATAACGTGGACTACCCCAGGAAACGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS GCA 72 bp | TGGAGAGGGTTGGCCCTGTGGACTTCTGCTTGCTTTTaGCTGTCTTGGAAGATGAGGGTCCCTGCTCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WRGLALWTSACF*LSWKMRVPAPR Trigger: CCTTGGAGCAGGGACCCTCATCTTCCAAGACAGGCAAAAGCAAGCAGAAGTCCACAGGGCCAACCCTCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CCA 72 bp | TCCCGTTCTTTTGTACTGAGAGGCAGTGCCAGACTCTaGCGCACGAGCAGCTGGATTGTGTCATTGAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SRSFVLRGSARL*RTSSWIVSLRR Trigger: GCGCCTCAATGACACAATCCAGCTGCTCGTGCGCCAGAGTCTGGCACTGCCTCTCAGTACAAAAGAACGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 ENSMUST00000142387.2 |
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| CDS CCA 72 bp | CAGGGCTCGTCCTCAGATAGGGCTCTCTTCTGTACCTaGACCACCTGGGCCTCAAACCATGCACCGAAGATA | + |
|
Preference number: 6 (lower is better) Translates to: QGSSSDRALFCT*TTWASNHAPKI Trigger: TATCTTCGGTGCATGGTTTGAGGCCCAGGTGGTCCAGGTACAGAAGAGAGCCCTATCTGAGGACGAGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| CDS CCA 72 bp | CTTGCTCTTCTTAGAGGCACGGGGGCTGGAGAGGGTTaGCCCTGTGGACTTCTGCTTGCTTTTGCCTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LALLRGTGAGEG*PCGLLLAFACL Trigger: AAGACAGGCAAAAGCAAGCAGAAGTCCACAGGGCCAACCCTCTCCAGCCCCCGTGCCTCTAAGAAGAGCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| CDS CAA 72 bp | CCTTGGCGCCAGTCTTCAGCCTCCGCACCTTTCTCATaGATTGGGGAGTGGCAATTGAGTGCCAGAGCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: PWRQSSASAPFS*IGEWQLSARAL Trigger: TAGGGCTCTGGCACTCAATTGCCACTCCCCAATCAATGAGAAAGGTGCGGAGGCTGAAGACTGGCGCCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 90 bp | CACACATGGCAGGCACACTTTCGACATGGTTTGTTTTCATCATCCTaGCAGAACCGGCAGGATGGGCCGCTCTTCCGTTGCGAGGGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: HTWQAHFRHGLFSSS*QNRQDGPLFRCEGL Trigger: TAGCCCCTCGCAACGGAAGAGCGGCCCATCCTGCCGGTTCTGCAAGGATGATGAAAACAAACCATGTCGAAAGTGTGCCTGCCATGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113035.8 ENSMUST00000113038.8 |
||
| CDS TCA 72 bp | CCAGACTCTGGCGCACGAGCAGCTGGATTGTGTCATTaGGGCGCACATCATAATCGAAGAGTGTGTGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PDSGARAAGLCH*GAHHNRRVCGH Trigger: ATGGCCACACACTCTTCGATTATGATGTGCGCCTCAATGACACAATCCAGCTGCTCGTGCGCCAGAGTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 ENSMUST00000142387.2 |
||
| CDS GCA 72 bp | AGGCACACTTTCGACATGGTTTGTTTTCATCATCCTTaGAGAACCGGCAGGATGGGCCGCTCTTCCGTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RHTFDMVCFHHP*RTGRMGRSSVA Trigger: CGCAACGGAAGAGCGGCCCATCCTGCCGGTTCTGCAAGGATGATGAAAACAAACCATGTCGAAAGTGTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113035.8 ENSMUST00000113038.8 |
||
| CDS CCA 72 bp | TGCACCTTGGTCAACCTGGACAGAGAGTTCACGGTGTaGGTCTCCTTCCCATCCATAGTTCGAACCTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: CTLVNLDREFTV*VSFPSIVRTWI Trigger: GATCCAGGTTCGAACTATGGATGGGAAGGAGACCCACACCGTGAACTCTCTGTCCAGGTTGACCAAGGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 ENSMUST00000142387.2 |
||
| CDS CCA 72 bp | TCCTCAGATAGGGCTCTCTTCTGTACCTGGACCACCTaGGCCTCAAACCATGCACCGAAGATATTGTCACGC | + |
|
Preference number: 6 (lower is better) Translates to: SSDRALFCTWTT*ASNHAPKILSR Trigger: GCGTGACAATATCTTCGGTGCATGGTTTGAGGCCCAGGTGGTCCAGGTACAGAAGAGAGCCCTATCTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CCA 72 bp | GCCCTATTGTTATTAGTGAGCTTCTGGTCAGAGGACTaGCCTGCTGTACGCTTGTTGCCAGAGAGGTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: ALLLLVSFWSED*PAVRLLPERSR Trigger: CCGAGACCTCTCTGGCAACAAGCGTACAGCAGGCCAGTCCTCTGACCAGAAGCTCACTAATAACAATAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CCA 72 bp | GCGCCAGTCTTCAGCCTCCGCACCTTTCTCATTGATTaGGGAGTGGCAATTGAGTGCCAGAGCCCTATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: APVFSLRTFLID*GVAIECQSPIV Trigger: AACAATAGGGCTCTGGCACTCAATTGCCACTCCCCAATCAATGAGAAAGGTGCGGAGGCTGAAGACTGGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 72 bp | CAGGCACACTTTCGACATGGTTTGTTTTCATCATCCTaGCAGAACCGGCAGGATGGGCCGCTCTTCCGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QAHFRHGLFSSS*QNRQDGPLFRC Trigger: GCAACGGAAGAGCGGCCCATCCTGCCGGTTCTGCAAGGATGATGAAAACAAACCATGTCGAAAGTGTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113035.8 ENSMUST00000113038.8 |
||
| CDS CAA 90 bp | TTCTGTACCTGGACCACCTGGGCCTCAAACCATGCACCGAAGATATaGTCACGCACGTCCACATACTCATTGACCTTGTACAGCCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FCTWTTWASNHAPKI*SRTSTYSLTLYSPR Trigger: CCTGGGGCTGTACAAGGTCAATGAGTATGTGGACGTGCGTGACAATATCTTCGGTGCATGGTTTGAGGCCCAGGTGGTCCAGGTACAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS GCA 72 bp | TCTCTTCTGTACCTGGACCACCTGGGCCTCAAACCATaGACCGAAGATATTGTCACGCACGTCCACATACTC | + |
|
Preference number: 6 (lower is better) Translates to: SLLYLDHLGLKP*TEDIVTHVHIL Trigger: GAGTATGTGGACGTGCGTGACAATATCTTCGGTGCATGGTTTGAGGCCCAGGTGGTCCAGGTACAGAAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS GCA 72 bp | AGGCACACTTTCGACATGGTTTGTTTTCATCATCCTTaGAGAACCGGCAGGATGGGCCGCTCTTCCCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RHTFDMVCFHHP*RTGRMGRSSLC Trigger: ACACAGGGAAGAGCGGCCCATCCTGCCGGTTCTGCAAGGATGATGAAAACAAACCATGTCGAAAGTGTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001258.15 ENSMUST00000113039.9 |
||
| CDS CCA 72 bp | CAATCTTTTTCCTCAGCTCCTGCACCTTGGTCAACCTaGACAGAGAGTTCACGGTGTGGGTCTCCTTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: QSFSSAPAPWST*TESSRCGSPSH Trigger: ATGGGAAGGAGACCCACACCGTGAACTCTCTGTCCAGGTTGACCAAGGTGCAGGAGCTGAGGAAAAAGATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 ENSMUST00000142387.2 |
||
| CDS CAA 72 bp | AAGATATTGTCACGCACGTCCACATACTCATTGACCTaGTACAGCCCCAGGTCCGTGTCCTCCCACACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: KILSRTSTYSLT*YSPRSVSSHTV Trigger: GACTGTGTGGGAGGACACGGACCTGGGGCTGTACAAGGTCAATGAGTATGTGGACGTGCGTGACAATATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 ENSMUST00000142387.2 |
||
| CDS CAA 90 bp | TCAAACCATGCACCGAAGATATTGTCACGCACGTCCACATACTCATaGACCTTGTACAGCCCCAGGTCCGTGTCCTCCCACACAGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SNHAPKILSRTSTYS*TLYSPRSVSSHTVL Trigger: CAAGACTGTGTGGGAGGACACGGACCTGGGGCTGTACAAGGTCAATGAGTATGTGGACGTGCGTGACAATATCTTCGGTGCATGGTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS TCA 72 bp | TGCCAGAGAGGTCTCGGCCACCACTCCCTGTGTATGTaGAGTAATTGCCATTGTCCACATCATCCTCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: CQRGLGHHSLCM*SNCHCPHHPHS Trigger: GCTATGAGGATGATGTGGACAATGGCAATTACTTCACATACACAGGGAGTGGTGGCCGAGACCTCTCTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CCA 72 bp | TTGAGTGCCAGAGCCCTATTGTTATTAGTGAGCTTCTaGTCAGAGGACTGGCCTGCTGTACGCTTGTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSARALLLLVSF*SEDWPAVRLLP Trigger: TGGCAACAAGCGTACAGCAGGCCAGTCCTCTGACCAGAAGCTCACTAATAACAATAGGGCTCTGGCACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
||
| CDS CAA 72 bp | TGGACCACCTGGGCCTCAAACCATGCACCGAAGATATaGTCACGCACGTCCACATACTCATTGACCTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: WTTWASNHAPKI*SRTSTYSLTLY Trigger: GTACAAGGTCAATGAGTATGTGGACGTGCGTGACAATATCTTCGGTGCATGGTTTGAGGCCCAGGTGGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| CDS TCA 72 bp | TCACAGTGCGAGCACGAGCACGGACATTCTTGGCTTTaGCAATGTCCACTCCATGCTCTGGATAGTCATCAT | + |
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Preference number: 6 (lower is better) Translates to: SQCEHEHGHSWL*QCPLHALDSHH Trigger: ATGATGACTATCCAGAGCATGGAGTGGACATTGTCAAAGCCAAGAATGTCCGTGCTCGTGCTCGCACTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| CDS CAA 72 bp | TTGATTGGGGAGTGGCAATTGAGTGCCAGAGCCCTATaGTTATTAGTGAGCTTCTGGTCAGAGGACTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LIGEWQLSARAL*LLVSFWSEDWP Trigger: AGGCCAGTCCTCTGACCAGAAGCTCACTAATAACAATAGGGCTCTGGCACTCAATTGCCACTCCCCAATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| CDS CAA 72 bp | GCCTCCGCACCTTTCTCATTGATTGGGGAGTGGCAATaGAGTGCCAGAGCCCTATTGTTATTAGTGAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ASAPFSLIGEWQ*SARALLLLVSF Trigger: GAAGCTCACTAATAACAATAGGGCTCTGGCACTCAATTGCCACTCCCCAATCAATGAGAAAGGTGCGGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| CDS GCA 72 bp | CGCACCTTTCTCATTGATTGGGGAGTGGCAATTGAGTaGCAGAGCCCTATTGTTATTAGTGAGCTTCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: RTFLIDWGVAIE*QSPIVISELLV Trigger: GACCAGAAGCTCACTAATAACAATAGGGCTCTGGCACTCAATTGCCACTCCCCAATCAATGAGAAAGGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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| CDS TCA 72 bp | ACTTCATCCACAAACATGATCCGACAGTTGTTGAGCTaGGAGTCATTCAAGAGCCTGATGTTGCCGTATAGC | + |
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Preference number: 6 (lower is better) Translates to: TSSTNMIRQLLS*ESFKSLMLPYS Trigger: GCTATACGGCAACATCAGGCTCTTGAATGACTCTCAGCTCAACAACTGTCGGATCATGTTTGTGGATGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001258.15 ENSMUST00000113035.8 ENSMUST00000113038.8 ENSMUST00000113039.9 |
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