Pregenerated sensors for UHMK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026667Ensembl transcript IDs: ENSMUST00000027979.14, ENSMUST00000123399.2, ENSMUST00000150821.8
Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAAAGGGTGGCCACATGGGTGCTCTAACCCCCTCAATGTATAGCTaGGAGGTCGGGTCCTACTCAGTGCCATGTTTGCAATGCAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: IKGGHMGALTPSMYS*EVGSYSVPCLQCSH Trigger: GTGACTGCATTGCAAACATGGCACTGAGTAGGACCCGACCTCTCAGCTATACATTGAGGGGGTTAGAGCACCCATGTGGCCACCCTTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR TCA 90 bp | ATAGAACAGCTTCCTAGCAGAGCTGGGCAAGATGGTGCACATCTGTaGCAAGCAGCACTTGGGAAGCTGAAGCAGGAAGATCCTGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: IEQLPSRAGQDGAHL*QAALGKLKQEDPEL Trigger: CAGCTCAGGATCTTCCTGCTTCAGCTTCCCAAGTGCTGCTTGTCACAGATGTGCACCATCTTGCCCAGCTCTGCTAGGAAGCTGTTCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR TCA 90 bp | CCTCAACAAGAGCAGTGTGTATTTGAGGAGACAGGCAACGCCAAGTaGAGAGTGCCAAACCCTAGGCAAAGAAAGGTAACTTGCCGAGCA | + |
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Preference number: 1 (lower is better) Translates to: PQQEQCVFEETGNAK*RVPNPRQRKVTCRA Trigger: TGCTCGGCAAGTTACCTTTCTTTGCCTAGGGTTTGGCACTCTTCACTTGGCGTTGCCTGTCTCCTCAAATACACACTGCTCTTGTTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR TCA 90 bp | CAACAGGAGGCAACTGCCCTTACAGCGAGCGGGCTTTGGTTTAGGTaGTCTTTCACATGTTGCTTAAACCAGACCTTCTATGCCCCAAAC | + |
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Preference number: 1 (lower is better) Translates to: QQEATALTASGLWFR*SFTCCLNQTFYAPN Trigger: GTTTGGGGCATAGAAGGTCTGGTTTAAGCAACATGTGAAAGATCACCTAAACCAAAGCCCGCTCGCTGTAAGGGCAGTTGCCTCCTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR CCA 90 bp | CACTCATATCCCTCAAGCCACAGTCCATCTGTGTCCACAAACTCGTaGCAACAGGCATCCTCTATCAAGGACACACTAGATTGCTATTGT | + |
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Preference number: 1 (lower is better) Translates to: HSYPSSHSPSVSTNS*QQASSIKDTLDCYC Trigger: ACAATAGCAATCTAGTGTGTCCTTGATAGAGGATGCCTGTTGCCACGAGTTTGTGGACACAGATGGACTGTGGCTTGAGGGATATGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR TCA 90 bp | CTCCTCTCTGCTCATGTCCATCTCTGTCTTCCCTGTTCTTATCTCTaGCAGCCTTCTGATGACCCATCTAATAGAGTAACACAGCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: LLSAHVHLCLPCSYL*QPSDDPSNRVTQLK Trigger: TTTCAGCTGTGTTACTCTATTAGATGGGTCATCAGAAGGCTGTCAGAGATAAGAACAGGGAAGACAGAGATGGACATGAGCAGAGAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR GCA 90 bp | GCTAGCATCGTCTGTAACAAGTCTACAGTGTCAACTCTACACATGTaGATAGCTACATCTGCATGGATGAGGTTCACAGAATGCTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: ASIVCNKSTVSTLHM*IATSAWMRFTECCE Trigger: CTCACAGCATTCTGTGAACCTCATCCATGCAGATGTAGCTATGCACATGTGTAGAGTTGACACTGTAGACTTGTTACAGACGATGCTAGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR TCA 90 bp | CCTGCCTTGCCACTAAACACTAAGAACTCAGTTCACAAAGCACACTaGGCCTTCAAAAGAGCCACCACTTTTTCTTGGCATTATCATGAC | + |
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Preference number: 1 (lower is better) Translates to: PALPLNTKNSVHKAH*AFKRATTFSWHYHD Trigger: GTCATGATAATGCCAAGAAAAAGTGGTGGCTCTTTTGAAGGCTCAGTGTGCTTTGTGAACTGAGTTCTTAGTGTTTAGTGGCAAGGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR CCA 90 bp | GCAGAGAACAGGGTAACTTACACTCTGAAGAGCTACATGGAACCCTaGTCTAGACTCCACTTTGTTCTGCACTTTACAGTAATGAACTCT | + |
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Preference number: 1 (lower is better) Translates to: AENRVTYTLKSYMEP*SRLHFVLHFTVMNS Trigger: AGAGTTCATTACTGTAAAGTGCAGAACAAAGTGGAGTCTAGACCAGGGTTCCATGTAGCTCTTCAGAGTGTAAGTTACCCTGTTCTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR CCA 90 bp | AATTACTCGGGCTCACTCATTTACTTCCTCAGCTCCCTTAAAATCTaGCTAGCATCGTCTGTAACAAGTCTACAGTGTCAACTCTACACA | + |
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Preference number: 1 (lower is better) Translates to: NYSGSLIYFLSSLKI*LASSVTSLQCQLYT Trigger: TGTGTAGAGTTGACACTGTAGACTTGTTACAGACGATGCTAGCCAGATTTTAAGGGAGCTGAGGAAGTAAATGAGTGAGCCCGAGTAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR TCA 90 bp | AGTGTCCACAACTTACAAGAAAGAGAGAGCTGGATCAGTAAGTGCTaGAGAAAGAACCTGATAAATGAAACTAGATCCCAGAATCAGATG | + |
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Preference number: 1 (lower is better) Translates to: SVHNLQERESWISKC*RKNLINETRSQNQM Trigger: CATCTGATTCTGGGATCTAGTTTCATTTATCAGGTTCTTTCTTCAGCACTTACTGATCCAGCTCTCTCTTTCTTGTAAGTTGTGGACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR GCA 90 bp | GGATTAAATAAATGTACAAGGTACCCTTTAAAATGGGTAAAGGGGTaGTCCTGCATTCAGCTGTGGAATATAATAATCCAAGAAATGGAA | + |
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Preference number: 1 (lower is better) Translates to: GLNKCTRYPLKWVKG*SCIQLWNIIIQEME Trigger: TTCCATTTCTTGGATTATTATATTCCACAGCTGAATGCAGGAGCACCCCTTTACCCATTTTAAAGGGTACCTTGTACATTTATTTAATCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR GCA 90 bp | ACTCTGTCACAAGTGTACAATCTGTGGGTTATCTTGTATAATCAGTaGTTTACAAAAGTTTCCTACGTTTACACCTTTCAAGGCAAACTA | + |
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Preference number: 1 (lower is better) Translates to: TLSQVYNLWVILYNQ*FTKVSYVYTFQGKL Trigger: TAGTTTGCCTTGAAAGGTGTAAACGTAGGAAACTTTTGTAAAGCACTGATTATACAAGATAACCCACAGATTGTACACTTGTGACAGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR CCA 90 bp | TCAGGTAAGGAAATAGGAAAAACTCTGTCACAAGTGTACAATCTGTaGGTTATCTTGTATAATCAGTGCTTTACAAAAGTTTCCTACGTT | + |
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Preference number: 1 (lower is better) Translates to: SGKEIGKTLSQVYNL*VILYNQCFTKVSYV Trigger: AACGTAGGAAACTTTTGTAAAGCACTGATTATACAAGATAACCCACAGATTGTACACTTGTGACAGAGTTTTTCCTATTTCCTTACCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR GCA 90 bp | GATGGGGGAGGAGGGTCTGTGATGAGCTGCCTTCTCTGCACTCTTCTCTTTTCCACACTGCCCTCAGGCTaGAGACAGAGGCGACGGGGA | + |
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Preference number: 2 (lower is better) Translates to: DGGGGSVMSCLLCTLLFSTLPSG*RQRRRG Trigger: TCCCCGTCGCCTCTGTCTGCAGCCTGAGGGCAGTGT...GGAAAAGAGAAGAGTGCAGAGAAGGCAGCTCATCACAGACCCTCCTCCCCCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACAGAATGCTGTGAGTACAGCAGTGTTAGCAGCATACTGCACGGTAAAGGGGCAGCAGGGCAGATaGGGGAGGAGGGTCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: GSQNAVSTAVLAAYCTVKGQQGR*GRRVCD Trigger: ATCACAGACCCTCCTCCCCCATCTGCCCTGCTGCCC...CTTTACCGTGCAGTATGCTGCTAACACTGCTGTACTCACAGCATTCTGTGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR GCA 90 bp | TTACAGTCAAAAGCCGATGACTCGGGACACTGCCCTCAGGCTGCAGACAGAGGCACTCAGTGCCATGTTTaGAATGCAGTCACTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LQSKADDSGHCPQAADRGTQCHV*NAVTVW Trigger: CCAGACAGTGACTGCATTGCAAACATGGCACTGAGT...GCCTCTGTCTGCAGCCTGAGGGCAGTGTCCCGAGTCATCGGCTTTTGACTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACAGAATGCTGTGAGTACAGCAGTGTTAGCAGCATACTGCACGGTAAAGGGGAAAGGAGGAAGGTaGCAGGGCAGCAGGGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: GSQNAVSTAVLAAYCTVKGKGGR*QGSRAD Trigger: ATCTGCCCTGCTGCCCTGCCACCTTCCTCCTTTCCC...CTTTACCGTGCAGTATGCTGCTAACACTGCTGTACTCACAGCATTCTGTGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR GCA 90 bp | TACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGTGCTACACTGCCCTCAGGCTaGAGACAGAGGCGACGGGGA | + |
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Preference number: 2 (lower is better) Translates to: YREVFSKSTQCSSLKHSATLPSG*RQRRRG Trigger: TCCCCGTCGCCTCTGTCTGCAGCCTGAGGGCAGTGT...AGCACTGTGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGAAAGGTAACTTGCCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAGGGCAGCAGGGCAGATaGGGGAGGAGGGTCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: AKKGNLPSTSRNGDSVELGQQGR*GRRVCD Trigger: ATCACAGACCCTCCTCCCCCATCTGCCCTGCTGCCC...TAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGGCAAGTTACCTTTCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR TCA 90 bp | CTCATACTTCGGCACCTTTCTCTGGGTGGCAGCACAGTTGCTGGCAGGTTAACACACACAATGAACCCCTaGAAAAGCCTTCTTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LILRHLSLGGSTVAGRLTHTMNP*KSLLPK Trigger: CTTGGGAAGAAGGCTTTTTCAGGGGTTCATTGTGTG...TGTTAACCTGCCAGCAACTGTGCTGCCACCCAGAGAAAGGTGCCGAAGTATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR GCA 90 bp | CCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAGAAGTGACCAAGGACGGGAAATGGGTAAAGGGGTaGTCCTGCATTCAGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: PSTSRNGDSVELEVTKDGKWVKG*SCIQLW Trigger: CCACAGCTGAATGCAGGAGCACCCCTTTACCCATTT...CCCGTCCTTGGTCACTTCTAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR TCA 90 bp | CTCATACTTCGGCACCTTTCTCTGGGTGGCAGCACAGTTGCTGGCAGGTTAACAAAACCAACCACACAATaGACCCCTGAAAAAGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LILRHLSLGGSTVAGRLTKPTTQ*TPEKAF Trigger: GAAGGCTTTTTCAGGGGTTCATTGTGTGGTTGGTTT...TGTTAACCTGCCAGCAACTGTGCTGCCACCCAGAGAAAGGTGCCGAAGTATGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR GCA 90 bp | CCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAGAAGTGACCAAGGACGGGGCTTGGCAGCCTACCTaGAGTTTATTTGCAAGGATC | + |
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Preference number: 2 (lower is better) Translates to: PSTSRNGDSVELEVTKDGAWQPT*SLFARI Trigger: GATCCTTGCAAATAAACTGCAGGTAGGCTGCCAAGC...CCCGTCCTTGGTCACTTCTAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR CCA 90 bp | CCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAGAAGTGACCAAGGACGGGTGCACAAATAAAGGGTaGCCACATGGGTGCTCTAAC | + |
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Preference number: 2 (lower is better) Translates to: PSTSRNGDSVELEVTKDGCTNKG*PHGCSN Trigger: GTTAGAGCACCCATGTGGCCACCCTTTATTTGTGCA...CCCGTCCTTGGTCACTTCTAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGCTCACACTTTATAGGGAGGTGGAAATAAAGTCCTCTGCTATTCAGCAAGGGAAAGGAGGAAGGTaGCAGGGCAGCAGGGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: TVLTLYREVEIKSSAIQQGKGGR*QGSRAD Trigger: ATCTGCCCTGCTGCCCTGCCACCTTCCTCCTTTCCC...TTGCTGAATAGCAGAGGACTTTATTTCCACCTCCCTATAAAGTGTGAGCACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR CCA 90 bp | CTCATACTTCGGCACCTTTCTCTGGGTGGCAGCACAGTTGCTGGCAGGTTAACATGGCAGCACAGTTGCTaGCAGGTTAACATATCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LILRHLSLGGSTVAGRLTWQHSC*QVNISS Trigger: TGAAGATATGTTAACCTGCCAGCAACTGTGCTGCCA...TGTTAACCTGCCAGCAACTGTGCTGCCACCCAGAGAAAGGTGCCGAAGTATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCACACTGAGCCTTCAAAAGAGCCACCACTTTTTCTTGGCATTATCATGACTGAAGCAGGAAGATCCTaGGCTGGGGGCTTGTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: KHTEPSKEPPLFLGIIMTEAGRS*AGGLSR Trigger: CCTAGACAAGCCCCCAGCTCAGGATCTTCCTGCTTC...AGTCATGATAATGCCAAGAAAAAGTGGTGGCTCTTTTGAAGGCTCAGTGTGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGCAGAGAACAGGGTAACTTACACTCTGAAGAGCTACATGGAACCCTGGTCTAAATGGGTAAAGGGGTaGTCCTGCATTCAGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: RAENRVTYTLKSYMEPWSKWVKG*SCIQLW Trigger: CCACAGCTGAATGCAGGAGCACCCCTTTACCCATTT...AGACCAGGGTTCCATGTAGCTCTTCAGAGTGTAAGTTACCCTGTTCTCTGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGCTCACACTTTATAGGGAGGTGGAAATAAAGTCCTCTGCTATTCAGCAAGATGACTCGGGACACTaGCCTCAGGCTGCAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: TVLTLYREVEIKSSAIQQDDSGH*PQAADR Trigger: TCTGTCTGCAGCCTGAGGGCAGTGTCCCGAGTCATC...TTGCTGAATAGCAGAGGACTTTATTTCCACCTCCCTATAAAGTGTGAGCACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR CCA 90 bp | TACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGTGCTTTCGGCACCTTTCTCTaGGTGGCAGCACAGTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: YREVFSKSTQCSSLKHSAFGTFL*VAAQLL Trigger: CAGCAACTGTGCTGCCACCCAGAGAAAGGTGCCGAA...AGCACTGTGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAAGAAAGGTAACTTGCCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTACCCTCAATGTATAGCTaGGAGGTCGGGTCCTACTCA | + |
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Preference number: 2 (lower is better) Translates to: AKKGNLPSTSRNGDSVELPSMYS*EVGSYS Trigger: TGAGTAGGACCCGACCTCTCAGCTATACATTGAGGG...TAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGGCAAGTTACCTTTCTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCAATCTTGGGTCTACAGTAGAGCAGAGAACAGGGTAACTTACACTCTGAAGCCAGTCAGCAACTTCTaGGCAGCTTTGGAATCACCA | + |
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Preference number: 2 (lower is better) Translates to: SQSWVYSRAENRVTYTLKPVSNF*AALESP Trigger: TGGTGATTCCAAAGCTGCTCAGAAGTTGCTGACTGG...CTTCAGAGTGTAAGTTACCCTGTTCTCTGCTCTACTGTAGACCCAAGATTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123399.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTGTTTACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACAGTGCATGGTCACCAGTaGGTCCCCTCCCACTGTACT | + |
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Preference number: 2 (lower is better) Translates to: LCLQRSFQQKYAMQLAETVHGHQ*VPSHCT Trigger: AGTACAGTGGGAGGGGACGCACTGGTGACCATGCAC...TGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTAAACACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGCAGAGAACAGGGTAACTTACACTCTGAAGAGCTACATGGAACCCTGGTCTTGCACAAATAAAGGGTaGCCACATGGGTGCTCTAAC | + |
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Preference number: 2 (lower is better) Translates to: RAENRVTYTLKSYMEPWSCTNKG*PHGCSN Trigger: GTTAGAGCACCCATGTGGCCACCCTTTATTTGTGCA...AGACCAGGGTTCCATGTAGCTCTTCAGAGTGTAAGTTACCCTGTTCTCTGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCAATCTTGGGTCTACAGTAGAGCAGAGAACAGGGTAACTTACACTCTGAAGACTTCTGAGCAGCTTTaGAATCACCAGCGTTCGCGT | + |
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Preference number: 2 (lower is better) Translates to: SQSWVYSRAENRVTYTLKTSEQL*NHQRSR Trigger: ACGCGAACGCTGGTGATTCCAAAGCTGCTCAGAAGT...CTTCAGAGTGTAAGTTACCCTGTTCTCTGCTCTACTGTAGACCCAAGATTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123399.2 |
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| 3UTR-3UTR TCA 90 bp | CTCATACTTCGGCACCTTTCTCTGGGTGGCAGCACAGTTGCTGGCAGGTTAACACACTGTAAAATACACTaGCTCAGATTCTCTATAGTC | + |
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Preference number: 2 (lower is better) Translates to: LILRHLSLGGSTVAGRLTHCKIH*LRFSIV Trigger: GACTATAGAGAATCTGAGTCAGTGTATTTTACAGTG...TGTTAACCTGCCAGCAACTGTGCTGCCACCCAGAGAAAGGTGCCGAAGTATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR TCA 90 bp | CCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAGAAGTGACCAAGGACGGGGTGAGGTTTAATATTTaGCTTGCCCAGAACTTTAGC | + |
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Preference number: 2 (lower is better) Translates to: PSTSRNGDSVELEVTKDGVRFNI*LAQNFS Trigger: GCTAAAGTTCTGGGCAAGTCAAATATTAAACCTCAC...CCCGTCCTTGGTCACTTCTAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR TCA 90 bp | TACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGTGCTAGAGCAGTGTGTATTTaGGGAGACAGGCAACGCCAA | + |
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Preference number: 2 (lower is better) Translates to: YREVFSKSTQCSSLKHSARAVCI*GDRQRQ Trigger: TTGGCGTTGCCTGTCTCCTCAAATACACACTGCTCT...AGCACTGTGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCTTCTCTGCACTCTTCTCTTTTCCCGTCACTGTGCATCTAACTTTTATCTGAAATGGGTAAAGGGGTaGTCCTGCATTCAGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: CLLCTLLFSRHCASNFYLKWVKG*SCIQLW Trigger: CCACAGCTGAATGCAGGAGCACCCCTTTACCCATTT...CAGATAAAAGTTAGATGCACAGTGACGGGAAAAGAGAAGAGTGCAGAGAAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR GCA 90 bp | ATCAGTTTAGCAGAGAGGAAGAGTTCCCAAAGGGAGACGCTGTGCCAATGGTCAATGAGGTTCACAGAATaGTGTGAGTACAGCAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: ISLAERKSSQRETLCQWSMRFTE*CEYSSV Trigger: AACACTGCTGTACTCACAGCATTCTGTGAACCTCAT...TGACCATTGGCACAGCGTCTCCCTTTGGGAACTCTTCCTCTCTGCTAAACTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAAGAAAGGTAACTTGCCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTACAAAGGGAGACGCTGTaGCAATGGTCACAAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: AKKGNLPSTSRNGDSVELQRETL*QWSQRK Trigger: CTTCCTTTGTGACCATTGGCACAGCGTCTCCCTTTG...TAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGGCAAGTTACCTTTCTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR CCA 90 bp | CCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAGAAGTGACCAAGGACGGGTCCTCTTTGGTAAAATaGGCTAAGAGCTATCACACA | + |
|
Preference number: 2 (lower is better) Translates to: PSTSRNGDSVELEVTKDGSSLVK*AKSYHT Trigger: TGTGTGATAGCTCTTAGCCCATTTTACCAAAGAGGA...CCCGTCCTTGGTCACTTCTAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR TCA 90 bp | CCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAGAAGTGACCAAGGACGGGTATGTTCTTCAAGTTTaGCTTGAAAACCAACCACAC | + |
|
Preference number: 2 (lower is better) Translates to: PSTSRNGDSVELEVTKDGYVLQV*LENQPH Trigger: GTGTGGTTGGTTTTCAAGTCAAACTTGAAGAACATA...CCCGTCCTTGGTCACTTCTAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAAAGAAAGGTAACTTGCCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTATCCCAGAATCAGATGTaGCAGATAACTGGCCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: AKKGNLPSTSRNGDSVELSQNQM*QITGLS Trigger: GGAAAGGCCAGTTATCTGTCACATCTGATTCTGGGA...TAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGGCAAGTTACCTTTCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR TCA 90 bp | CCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAGAAGTGACCAAGGACGGGTGGATCAGTAAGTGCTaGAGAAAGAACCTGATAAAT | + |
|
Preference number: 2 (lower is better) Translates to: PSTSRNGDSVELEVTKDGWISKC*RKNLIN Trigger: ATTTATCAGGTTCTTTCTTCAGCACTTACTGATCCA...CCCGTCCTTGGTCACTTCTAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR TCA 90 bp | TACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGTGCTACCGCAGTTTCTCTCTaGGACTTGAGTCACAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: YREVFSKSTQCSSLKHSATAVSL*DLSHKN Trigger: GTTCTTGTGACTCAAGTCTCAGAGAGAAACTGCGGT...AGCACTGTGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCCAATCTTGGGTCTACAGTAGAGCAGAGAACAGGGTAACTTACACTCTGAAGATAGTCTTTCACACCTaGACACCCACTCAAGCATAC | + |
|
Preference number: 2 (lower is better) Translates to: SQSWVYSRAENRVTYTLKIVFHT*TPTQAY Trigger: GTATGCTTGAGTGGGTGTGCAGGTGTGAAAGACTAT...CTTCAGAGTGTAAGTTACCCTGTTCTCTGCTCTACTGTAGACCCAAGATTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAAAGAAAGGTAACTTGCCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAGCTTGGCAGCCTACCTaGAGTTTATTTGCAAGGATC | + |
|
Preference number: 2 (lower is better) Translates to: AKKGNLPSTSRNGDSVELAWQPT*SLFARI Trigger: GATCCTTGCAAATAAACTGCAGGTAGGCTGCCAAGC...TAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGGCAAGTTACCTTTCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTGCTCACACTTTATAGGGAGGTGGAAATAAAGTCCTCTGCTATTCAGCAACAAAGGGAGACGCTGTaGCAATGGTCACAAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: TVLTLYREVEIKSSAIQQQRETL*QWSQRK Trigger: CTTCCTTTGTGACCATTGGCACAGCGTCTCCCTTTG...TTGCTGAATAGCAGAGGACTTTATTTCCACCTCCCTATAAAGTGTGAGCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCACACTGAGCCTTCAAAAGAGCCACCACTTTTTCTTGGCATTATCATGACTCCCCTCCCACTGTACTaGTATAATTCCCACCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: KHTEPSKEPPLFLGIIMTPLPLY*YNSHQV Trigger: TACCTGGTGGGAATTATAGCAGTACAGTGGGAGGGG...AGTCATGATAATGCCAAGAAAAAGTGGTGGCTCTTTTGAAGGCTCAGTGTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCATACTTCGGCACCTTTCTCTGGGTGGCAGCACAGTTGCTGGCAGGTTAACACAAGTGTACAATCTGTaGGTTATCTTGTATAATCAG | + |
|
Preference number: 2 (lower is better) Translates to: LILRHLSLGGSTVAGRLTQVYNL*VILYNQ Trigger: CTGATTATACAAGATAACCCACAGATTGTACACTTG...TGTTAACCTGCCAGCAACTGTGCTGCCACCCAGAGAAAGGTGCCGAAGTATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR CCA 90 bp | TACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGTGCTCAGGCAGTACCTTTCTaGGGTACCCAGCACTATTAT | + |
|
Preference number: 2 (lower is better) Translates to: YREVFSKSTQCSSLKHSAQAVPF*GTQHYY Trigger: ATAATAGTGCTGGGTACCCCAGAAAGGTACTGCCTG...AGCACTGTGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCACACTGAGCCTTCAAAAGAGCCACCACTTTTTCTTGGCATTATCATGACTACTCAGTGCCATGTTTaGAATGCAGTCACTGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: KHTEPSKEPPLFLGIIMTTQCHV*NAVTVW Trigger: CCAGACAGTGACTGCATTGCAAACATGGCACTGAGT...AGTCATGATAATGCCAAGAAAAAGTGGTGGCTCTTTTGAAGGCTCAGTGTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAAAGAAAGGTAACTTGCCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAATAGTCTTTCACACCTaGACACCCACTCAAGCATAC | + |
|
Preference number: 2 (lower is better) Translates to: AKKGNLPSTSRNGDSVELIVFHT*TPTQAY Trigger: GTATGCTTGAGTGGGTGTGCAGGTGTGAAAGACTAT...TAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGGCAAGTTACCTTTCTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGAATCTGCAGCTGTCCTCTTTGGTAAAATGGGCTAAGAGCTATCACACAATGATAGTCTTTCACACCTaGACACCCACTCAAGCATAC | + |
|
Preference number: 2 (lower is better) Translates to: RNLQLSSLVKWAKSYHTMIVFHT*TPTQAY Trigger: GTATGCTTGAGTGGGTGTGCAGGTGTGAAAGACTAT...CATTGTGTGATAGCTCTTAGCCCATTTTACCAAAGAGGACAGCTGCAGATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGAATTCACTTGTATCTTGTGGTCATCAGTAGAAACGTAGAGACCTGCTACGGGTCTGTGATGAGCTaGCTTCTCTGCACTCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: KRIHLYLVVISRNVETCYGSVMS*LLCTLL Trigger: GAGAAGAGTGCAGAGAAGGCAGCTCATCACAGACCC...GTAGCAGGTCTCTACGTTTCTACTGATGACCACAAGATACAAGTGAATTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | TACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGTGCTGGTGGCAGTAGTAGCTaGTTATACAAGGTTCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: YREVFSKSTQCSSLKHSAGGSSS*LYKVLS Trigger: ACTGAGAACCTTGTATAAGCAGCTACTACTGCCACC...AGCACTGTGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | TACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGTGCTTGCGCACAATGTTTCTaGATGCTGTCTGATATCAGG | + |
|
Preference number: 2 (lower is better) Translates to: YREVFSKSTQCSSLKHSACAQCF*MLSDIR Trigger: CCTGATATCAGACAGCATGCAGAAACATTGTGCGCA...AGCACTGTGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | TACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGTGCTTCTGGCTCACAGAAGTaGAGACTGAAGTTTCCTATC | + |
|
Preference number: 2 (lower is better) Translates to: YREVFSKSTQCSSLKHSASGSQK*RLKFPI Trigger: GATAGGAAACTTCAGTCTGCACTTCTGTGAGCCAGA...AGCACTGTGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTGTTTACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACAGTGACAAGCAGCACTTaGGAAGCTGAAGCAGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LCLQRSFQQKYAMQLAETVTSST*EAEAGR Trigger: TCTTCCTGCTTCAGCTTCCCAAGTGCTGCTTGTCAC...TGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTAAACACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTTGTCAATTACATTCTATCTGTCAGACCAACTTTCAAGAAACCTATAGCCCCCTCAATGTATAGCTaGGAGGTCGGGTCCTACTCA | + |
|
Preference number: 2 (lower is better) Translates to: SLVNYILSVRPTFKKPIAPSMYS*EVGSYS Trigger: TGAGTAGGACCCGACCTCTCAGCTATACATTGAGGG...GGCTATAGGTTTCTTGAAAGTTGGTCTGACAGATAGAATGTAATTGACAAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAAATGTGCACTGTATAGTGCTTTGGAAGAATAAAGACGAACCGAAGGAGGCAAAACCAACCACACAATaGACCCCTGAAAAAGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: QNVHCIVLWKNKDEPKEAKPTTQ*TPEKAF Trigger: GAAGGCTTTTTCAGGGGTTCATTGTGTGGTTGGTTT...TGCCTCCTTCGGTTCGTCTTTATTCTTCCAAAGCACTATACAGTGCACATTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGTTTACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACAATGAGCTGCCTTCTCTaGACTCTTCTCTTTTCCCGT | + |
|
Preference number: 2 (lower is better) Translates to: LCLQRSFQQKYAMQLAETMSCLL*TLLFSR Trigger: ACGGGAAAAGAGAAGAGTGCAGAGAAGGCAGCTCAT...TGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTAAACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCACACTGAGCCTTCAAAAGAGCCACCACTTTTTCTTGGCATTATCATGACTAGCTACATGGAACCCTaGTCTAGACTCCACTTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: KHTEPSKEPPLFLGIIMTSYMEP*SRLHFV Trigger: AACAAAGTGGAGTCTAGACCAGGGTTCCATGTAGCT...AGTCATGATAATGCCAAGAAAAAGTGGTGGCTCTTTTGAAGGCTCAGTGTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTGCTCACACTTTATAGGGAGGTGGAAATAAAGTCCTCTGCTATTCAGCAATTTCTCTCTGAGACTTaGGTCACAAGAACAGTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: TVLTLYREVEIKSSAIQQFLSET*VTRTVV Trigger: CACTACTGTTCTTGTGACTCAAGTCTCAGAGAGAAA...TTGCTGAATAGCAGAGGACTTTATTTCCACCTCCCTATAAAGTGTGAGCACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTGCTCACACTTTATAGGGAGGTGGAAATAAAGTCCTCTGCTATTCAGCAAGGGCTTTGGTTTAGGTaGTCTTTCACATGTTGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: TVLTLYREVEIKSSAIQQGLWFR*SFTCCL Trigger: TAAGCAACATGTGAAAGATCACCTAAACCAAAGCCC...TTGCTGAATAGCAGAGGACTTTATTTCCACCTCCCTATAAAGTGTGAGCACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGGTACCCTTTAAAATGGGTAAAGGGGTGCTCCTGCATTCAGCTGTGGAATATTGTCTGGGCAATGGCTaGACATTAGTAGGATTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: KVPFKMGKGVLLHSAVEYCLGNG*TLVGLN Trigger: ATTTAATCCTACTAATGTGCAGCCATTGCCCAGACA...ATATTCCACAGCTGAATGCAGGAGCACCCCTTTACCCATTTTAAAGGGTACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | CATACTTGCCCTTCAAAAGAATTCACTTGTATCTTGTGGTCATCAGTAGAAACGACTCAGTGCCATGTTTaGAATGCAGTCACTGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HTCPSKEFTCILWSSVETTQCHV*NAVTVW Trigger: CCAGACAGTGACTGCATTGCAAACATGGCACTGAGT...CGTTTCTACTGATGACCACAAGATACAAGTGAATTCTTTTGAAGGGCAAGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGAATTCACTTGTATCTTGTGGTCATCAGTAGAAACGTAGAGACCTGCTACAAACCAACCACACAATaGACCCCTGAAAAAGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: KRIHLYLVVISRNVETCYKPTTQ*TPEKAF Trigger: GAAGGCTTTTTCAGGGGTTCATTGTGTGGTTGGTTT...GTAGCAGGTCTCTACGTTTCTACTGATGACCACAAGATACAAGTGAATTCTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR TCA 90 bp | TACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGTGCTTGGATCAGTAAGTGCTaGAGAAAGAACCTGATAAAT | + |
|
Preference number: 2 (lower is better) Translates to: YREVFSKSTQCSSLKHSAWISKC*RKNLIN Trigger: ATTTATCAGGTTCTTTCTTCAGCACTTACTGATCCA...AGCACTGTGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCACACTGAGCCTTCAAAAGAGCCACCACTTTTTCTTGGCATTATCATGACTCCTGAAAAACACCTATaGCCATCTATAGAACAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: KHTEPSKEPPLFLGIIMTPEKHL*PSIEQL Trigger: AAGCTGTTCTATAGATGGTCATAGGTGTTTTTCAGG...AGTCATGATAATGCCAAGAAAAAGTGGTGGCTCTTTTGAAGGCTCAGTGTGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTGCTCACACTTTATAGGGAGGTGGAAATAAAGTCCTCTGCTATTCAGCAAAAACTGCTGGAAATGTaGCAGCTTTGTATTCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: TVLTLYREVEIKSSAIQQKLLEM*QLCILL Trigger: CAGAAGAATACAAAGCTGTCACATTTCCAGCAGTTT...TTGCTGAATAGCAGAGGACTTTATTTCCACCTCCCTATAAAGTGTGAGCACTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCACACTGAGCCTTCAAAAGAGCCACCACTTTTTCTTGGCATTATCATGACTTGTCTGGGCAATGGCTaGACATTAGTAGGATTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: KHTEPSKEPPLFLGIIMTCLGNG*TLVGLN Trigger: ATTTAATCCTACTAATGTGCAGCCATTGCCCAGACA...AGTCATGATAATGCCAAGAAAAAGTGGTGGCTCTTTTGAAGGCTCAGTGTGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | TACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGTGCTACTTTCTATCCTAAATaGTCCCTGGCTTGTACATAT | + |
|
Preference number: 2 (lower is better) Translates to: YREVFSKSTQCSSLKHSATFYPK*SLACTY Trigger: ATATGTACAAGCCAGGGAGCATTTAGGATAGAAAGT...AGCACTGTGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGTTTACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACAATTTTTCCTCCTCTCTaGTCATGTCCATCTCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LCLQRSFQQKYAMQLAETIFPPL*SCPSLS Trigger: AGACAGAGATGGACATGAGCAGAGAGGAGGAAAAAT...TGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTAAACACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTGTTTACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACAATAGCTACATCTGCATaGATGAGGTTCACAGAATGC | + |
|
Preference number: 2 (lower is better) Translates to: LCLQRSFQQKYAMQLAETIATSA*MRFTEC Trigger: GCATTCTGTGAACCTCATCCATGCAGATGTAGCTAT...TGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTAAACACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGTGTTTACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACAGTGAGGTTTAATATTTaGCTTGCCCAGAACTTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: LCLQRSFQQKYAMQLAETVRFNI*LAQNFS Trigger: GCTAAAGTTCTGGGCAAGTCAAATATTAAACCTCAC...TGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTAAACACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGTGTTTACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACATTTGTACAACAGAGATaGAATGACCTTGTAAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LCLQRSFQQKYAMQLAETFVQQR*NDLVRQ Trigger: TTGCCTTACAAGGTCATTTCATCTCTGTTGTACAAA...TGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTAAACACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR TCA 90 bp | CATACTTGCCCTTCAAAAGAATTCACTTGTATCTTGTGGTCATCAGTAGAAACGCACTGTAAAATACACTaGCTCAGATTCTCTATAGTC | + |
|
Preference number: 2 (lower is better) Translates to: HTCPSKEFTCILWSSVETHCKIH*LRFSIV Trigger: GACTATAGAGAATCTGAGTCAGTGTATTTTACAGTG...CGTTTCTACTGATGACCACAAGATACAAGTGAATTCTTTTGAAGGGCAAGTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR GCA 72 bp | AGCAGGGCAGATGGGGGAGGAGGGTCTGTGATGAGCTaGCTTCTCTGCACTCTTCTCTTTTCCCGTCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: SRADGGGGSVMS*LLCTLLFSRHC Trigger: ACAGTGACGGGAAAAGAGAAGAGTGCAGAGAAGGCAGCTCATCACAGACCCTCCTCCCCCATCTGCCCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR TCA 72 bp | GGCCACATGGGTGCTCTAACCCCCTCAATGTATAGCTaGGAGGTCGGGTCCTACTCAGTGCCATGTTTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GHMGALTPSMYS*EVGSYSVPCLQ Trigger: TTGCAAACATGGCACTGAGTAGGACCCGACCTCTCAGCTATACATTGAGGGGGTTAGAGCACCCATGTGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR TCA 72 bp | CATCAACCTTTCTTTTCCCTTACAGTCAAAAGCCGATaGCTCGGGACACTGCCCTCAGGCTGCAGACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HQPFFSLTVKSR*LGTLPSGCRQR Trigger: CCTCTGTCTGCAGCCTGAGGGCAGTGTCCCGAGTCATCGGCTTTTGACTGTAAGGGAAAAGAAAGGTTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR TCA 72 bp | CTTCCTAGCAGAGCTGGGCAAGATGGTGCACATCTGTaGCAAGCAGCACTTGGGAAGCTGAAGCAGGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LPSRAGQDGAHL*QAALGKLKQED Trigger: ATCTTCCTGCTTCAGCTTCCCAAGTGCTGCTTGTCACAGATGTGCACCATCTTGCCCAGCTCTGCTAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR GCA 72 bp | TTGGGTGAGAGTCTAGGTAAAGTGCATGGTCACCAGTaGGTCCCCTCCCACTGTACTGCTATAATTCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: LGESLGKVHGHQ*VPSHCTAIIPT Trigger: GGTGGGAATTATAGCAGTACAGTGGGAGGGGACGCACTGGTGACCATGCACTTTACCTAGACTCTCACCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR TCA 72 bp | ACAGGAGGACCGAGGTGGCTGACCGCAGTTTCTCTCTaGGACTTGAGTCACAAGAACAGTAGTGAACACCAA | + |
|
Preference number: 3 (lower is better) Translates to: TGGPRWLTAVSL*DLSHKNSSEHQ Trigger: TTGGTGTTCACTACTGTTCTTGTGACTCAAGTCTCAGAGAGAAACTGCGGTCAGCCACCTCGGTCCTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR GCA 72 bp | CCTCAATGTATAGCTGAGAGGTCGGGTCCTACTCAGTaGCATGTTTGCAATGCAGTCACTGTCTGGGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: PQCIAERSGPTQ*HVCNAVTVWAM Trigger: CATTGCCCAGACAGTGACTGCATTGCAAACATGGCACTGAGTAGGACCCGACCTCTCAGCTATACATTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR GCA 72 bp | GAGGGAAAGTCTAGACTAAGACAGAAGGAAGCCTTATaGCCCTCATACTTCGGCACCTTTCTCTGGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: EGKSRLRQKEAL*PSYFGTFLWVA Trigger: TGCCACCCAGAGAAAGGTGCCGAAGTATGAGGGGCATAAGGCTTCCTTCTGTCTTAGTCTAGACTTTCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR CCA 72 bp | CCCTCAAGCCACAGTCCATCTGTGTCCACAAACTCGTaGCAACAGGCATCCTCTATCAAGGACACACTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PSSHSPSVSTNS*QQASSIKDTLD Trigger: ATCTAGTGTGTCCTTGATAGAGGATGCCTGTTGCCACGAGTTTGTGGACACAGATGGACTGTGGCTTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR CCA 72 bp | CCTTATGCCCCTCATACTTCGGCACCTTTCTCTGGGTaGCAGCACAGTTGCTGGCAGGTTAACATATCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PYAPHTSAPFSG*QHSCWQVNISS Trigger: TGAAGATATGTTAACCTGCCAGCAACTGTGCTGCCACCCAGAGAAAGGTGCCGAAGTATGAGGGGCATAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR TCA 72 bp | CTCCACACAACAGCCTCAACAAGAGCAGTGTGTATTTaGGGAGACAGGCAACGCCAAGTGAAGAGTGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LHTTASTRAVCI*GDRQRQVKSAK Trigger: TTTGGCACTCTTCACTTGGCGTTGCCTGTCTCCTCAAATACACACTGCTCTTGTTGAGGCTGTTGTGTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR TCA 72 bp | GTAGAGCAGGAGCAGCCGTGTTTTGTACAACAGAGATaGAATGACCTTGTAAGGCAAGCAAAAGCGGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VEQEQPCFVQQR*NDLVRQAKAGL Trigger: CAGGCCCGCTTTTGCTTGCCTTACAAGGTCATTTCATCTCTGTTGTACAAAACACGGCTGCTCCTGCTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR CCA 72 bp | CGAAGGGAAGGGAGTCTGACCAAGGATCTTAAAGAATaGCTAGAACCCGCTCACAGATCATCAGGAGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RREGSLTKDLKE*LEPAHRSSGAE Trigger: TTCAGCTCCTGATGATCTGTGAGCGGGTTCTAGCCATTCTTTAAGATCCTTGGTCAGACTCCCTTCCCTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR TCA 72 bp | GAGCAGTGTGTATTTGAGGAGACAGGCAACGCCAAGTaGAGAGTGCCAAACCCTAGGCAAAGAAAGGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: EQCVFEETGNAK*RVPNPRQRKVT Trigger: AGTTACCTTTCTTTGCCTAGGGTTTGGCACTCTTCACTTGGCGTTGCCTGTCTCCTCAAATACACACTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR GCA 72 bp | CAGAATGCTGTGAGTACAGCAGTGTTAGCAGCATACTaGACGGTAAAGCTTGGCAGCCTACCTGCAGTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: QNAVSTAVLAAY*TVKLGSLPAVY Trigger: ATAAACTGCAGGTAGGCTGCCAAGCTTTACCGTGCAGTATGCTGCTAACACTGCTGTACTCACAGCATTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR GCA 72 bp | TTAGCAGAGAGGAAGAGTTCCCAAAGGGAGACGCTGTaGCAATGGTCACAAAGGAAGAAGAGTATCCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LAERKSSQRETL*QWSQRKKSIQS Trigger: TGACTGGATACTCTTCTTCCTTTGTGACCATTGGCACAGCGTCTCCCTTTGGGAACTCTTCCTCTCTGCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGTTTAGCAGAGAGGAAGAGTTCCCAAAGGGAGACGCTGTGCCAATGGTCAGGAGTTTTTGGGAACTaGAACAGCATGGACAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ISLAERKSSQRETLCQWSGVFGN*NSMDKR Trigger: TCTCTTGTCCATGCTGTTCAAGTTCCCAAAAACTCC...TGACCATTGGCACAGCGTCTCCCTTTGGGAACTCTTCCTCTCTGCTAAACTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTGCTCACACTTTATAGGGAGGTGGAAATAAAGTCCTCTGCTATTCAGCAACCCAGCCCGTACCCTTaGGGTGAGAGTCTAGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: TVLTLYREVEIKSSAIQQPSPYP*GESLGK Trigger: TTTACCTAGACTCTCACCCAAAGGGTACGGGCTGGG...TTGCTGAATAGCAGAGGACTTTATTTCCACCTCCCTATAAAGTGTGAGCACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR TCA 72 bp | TTCCCCTGGGACATCGGCCAGGTGAGGTTTAATATTTaGCTTGCCCAGAACTTTAGCTACACATCATCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: FPWDIGQVRFNI*LAQNFSYTSSN Trigger: GTTGGATGATGTGTAGCTAAAGTTCTGGGCAAGTCAAATATTAAACCTCACCTGGCCGATGTCCCAGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR TCA 72 bp | GCAACTGCCCTTACAGCGAGCGGGCTTTGGTTTAGGTaGTCTTTCACATGTTGCTTAAACCAGACCTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: ATALTASGLWFR*SFTCCLNQTFY Trigger: ATAGAAGGTCTGGTTTAAGCAACATGTGAAAGATCACCTAAACCAAAGCCCGCTCGCTGTAAGGGCAGTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR GCA 72 bp | TTTAGGTTACATAGTAAAGAGCAGCACCTGCCCTACTaGACAAATAAAGGGTGGCCACATGGGTGCTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: FRLHSKEQHLPY*TNKGWPHGCSN Trigger: GTTAGAGCACCCATGTGGCCACCCTTTATTTGTGCAGTAGGGCAGGTGCTGCTCTTTACTATGTAACCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR GCA 72 bp | TGCATAGCTACATCTGCATGGATGAGGTTCACAGAATaGTGTGAGTACAGCAGTGTTAGCAGCATACTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: CIATSAWMRFTE*CEYSSVSSILH Trigger: GTGCAGTATGCTGCTAACACTGCTGTACTCACAGCATTCTGTGAACCTCATCCATGCAGATGTAGCTATGCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR CCA 72 bp | TACAGCAGTGTTAGCAGCATACTGCACGGTAAAGCTTaGCAGCCTACCTGCAGTTTATTTGCAAGGATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: YSSVSSILHGKA*QPTCSLFARIS Trigger: AGAGATCCTTGCAAATAAACTGCAGGTAGGCTGCCAAGCTTTACCGTGCAGTATGCTGCTAACACTGCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGTGCTAAGAATGATGCCAAGTaGTCAGCCACCTGCCACATT | + |
|
Preference number: 3 (lower is better) Translates to: YREVFSKSTQCSSLKHSAKNDAK*SATCHI Trigger: AATGTGGCAGGTGGCTGACAACTTGGCATCATTCTT...AGCACTGTGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR TCA 72 bp | ACACAGCTGAAAGAATTCAAGTCACTGAGGAGCATCTaGGTCAACATGCGCACAATGTTTCTGCATGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: TQLKEFKSLRSI*VNMRTMFLHAV Trigger: GACAGCATGCAGAAACATTGTGCGCATGTTGACTCAGATGCTCCTCAGTGACTTGAATTCTTTCAGCTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR GCA 72 bp | AGTAAGCATTCCAGTCTTCAAGAATGTGACTTGCTTTaGTTTAACAGAGAGGTAGAGCAGGAGCAGCCGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SKHSSLQECDLL*FNREVEQEQPC Trigger: ACACGGCTGCTCCTGCTCTACCTCTCTGTTAAAGCAAAGCAAGTCACATTCTTGAAGACTGGAATGCTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR CCA 72 bp | GTGTCAACTCTACACATGTGCATAGCTACATCTGCATaGATGAGGTTCACAGAATGCTGTGAGTACAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VSTLHMCIATSA*MRFTECCEYSS Trigger: ACTGCTGTACTCACAGCATTCTGTGAACCTCATCCATGCAGATGTAGCTATGCACATGTGTAGAGTTGACAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAATCTGCAGCTGTCCTCTTTGGTAAAATGGGCTAAGAGCTATCACACAATGGGAGTTTTTGGGAACTaGAACAGCATGGACAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RNLQLSSLVKWAKSYHTMGVFGN*NSMDKR Trigger: TCTCTTGTCCATGCTGTTCAAGTTCCCAAAAACTCC...CATTGTGTGATAGCTCTTAGCCCATTTTACCAAAGAGGACAGCTGCAGATTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGTGCTAGGAGCAGCCGTGTTTaGTACAACAGAGATGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: YREVFSKSTQCSSLKHSARSSRV*YNRDEM Trigger: CATTTCATCTCTGTTGTACAAAACACGGCTGCTCCT...AGCACTGTGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR CCA 72 bp | GGCTCACTCATTTACTTCCTCAGCTCCCTTAAAATCTaGCTAGCATCGTCTGTAACAAGTCTACAGTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: GSLIYFLSSLKI*LASSVTSLQCQ Trigger: TTGACACTGTAGACTTGTTACAGACGATGCTAGCCAGATTTTAAGGGAGCTGAGGAAGTAAATGAGTGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR CCA 72 bp | CCTAATCAGGGACAAAATGTGCACTGTATAGTGCTTTaGAAGAATAAAGACGAACCGAAGGAGGCAAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PNQGQNVHCIVL*KNKDEPKEARE Trigger: CTCTCTTGCCTCCTTCGGTTCGTCTTTATTCTTCCAAAGCACTATACAGTGCACATTTTGTCCCTGATTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR TCA 72 bp | CCACTAAACACTAAGAACTCAGTTCACAAAGCACACTaGGCCTTCAAAAGAGCCACCACTTTTTCTTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PLNTKNSVHKAH*AFKRATTFSWH Trigger: ATGCCAAGAAAAAGTGGTGGCTCTTTTGAAGGCTCAGTGTGCTTTGTGAACTGAGTTCTTAGTGTTTAGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR CCA 72 bp | CTAAACTGCTGGAAATGTGACAGCTTTGTATTCTTCTaGCTCACAGAAGTGCAGACTGAAGTTTCCTATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LNCWKCDSFVFF*LTEVQTEVSYP Trigger: AGGATAGGAAACTTCAGTCTGCACTTCTGTGAGCCAGAAGAATACAAAGCTGTCACATTTCCAGCAGTTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGTTTACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACAGGAAATGTGACAGCTTaGTATTCTTCTGGCTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LCLQRSFQQKYAMQLAETGNVTA*YSSGSQ Trigger: CTGTGAGCCAGAAGAATACAAAGCTGTCACATTTCC...TGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTAAACACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR GCA 72 bp | CCATGTTTGCAATGCAGTCACTGTCTGGGCAATGGCTaGACATTAGTAGGATTAAATAAATGTACAAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: PCLQCSHCLGNG*TLVGLNKCTRY Trigger: GTACCTTGTACATTTATTTAATCCTACTAATGTGCAGCCATTGCCCAGACAGTGACTGCATTGCAAACATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR GCA 72 bp | CACAGATCATCAGGAGCTGAAGGTGGCAGTAGTAGCTaGTTATACAAGGTTCTCAGTAAGAAACAAACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: HRSSGAEGGSSS*LYKVLSKKQTK Trigger: TTTTGTTTGTTTCTTACTGAGAACCTTGTATAAGCAGCTACTACTGCCACCTTCAGCTCCTGATGATCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGTGCTTTCTTCAAGTTTGACTaGAAAACCAACCACACAATG | + |
|
Preference number: 3 (lower is better) Translates to: YREVFSKSTQCSSLKHSAFFKFD*KTNHTM Trigger: CATTGTGTGGTTGGTTTTCAAGTCAAACTTGAAGAA...AGCACTGTGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCACACTGAGCCTTCAAAAGAGCCACCACTTTTTCTTGGCATTATCATGACTGGTTTAATATTTGACTaGCCCAGAACTTTAGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: KHTEPSKEPPLFLGIIMTGLIFD*PRTLAT Trigger: TGTAGCTAAAGTTCTGGGCAAGTCAAATATTAAACC...AGTCATGATAATGCCAAGAAAAAGTGGTGGCTCTTTTGAAGGCTCAGTGTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR CCA 72 bp | CCCTGTCTCCAAAAACTTTCTATCCTAAATGCTCCCTaGCTTGTACATATTTCTTTTGACAGCTCATTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PCLQKLSILNAP*LVHISFDSSFL Trigger: GAGAAATGAGCTGTCAAAAGAAATATGTACAAGCCAGGGAGCATTTAGGATAGAAAGTTTTTGGAGACAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR-3UTR CAA 90 bp | CATACTTGCCCTTCAAAAGAATTCACTTGTATCTTGTGGTCATCAGTAGAAACGGAATTCACTTGTATCTaGTGGTCATCAGTAGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: HTCPSKEFTCILWSSVETEFTCI*WSSVET Trigger: CGTTTCTACTGATGACCACAAGATACAAGTGAATTC...CGTTTCTACTGATGACCACAAGATACAAGTGAATTCTTTTGAAGGGCAAGTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR TCA 72 bp | AACTTACAAGAAAGAGAGAGCTGGATCAGTAAGTGCTaGAGAAAGAACCTGATAAATGAAACTAGATCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: NLQERESWISKC*RKNLINETRSQ Trigger: CTGGGATCTAGTTTCATTTATCAGGTTCTTTCTTCAGCACTTACTGATCCAGCTCTCTCTTTCTTGTAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR GCA 72 bp | AAATGTACAAGGTACCCTTTAAAATGGGTAAAGGGGTaGTCCTGCATTCAGCTGTGGAATATAATAATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: KCTRYPLKWVKG*SCIQLWNIIIQ Trigger: TTGGATTATTATATTCCACAGCTGAATGCAGGAGCACCCCTTTACCCATTTTAAAGGGTACCTTGTACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR TCA 72 bp | ACAAACAACTCATCTTTGCTTCATCATCACATGAAATaGCATCTTTTTAGGTTACATAGTAAAGAGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: TNNSSLLHHHMK*HLFRLHSKEQH Trigger: GTGCTGCTCTTTACTATGTAACCTAAAAAGATGTCATTTCATGTGATGATGAAGCAAAGATGAGTTGTTTGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR TCA 72 bp | TTCTCTTTTCCCGTCACTGTGCATCTAACTTTTATCTaGTCCATTTCAATTTCCCATTATAGCAGAAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: FSFPVTVHLTFI*SISISHYSRKN Trigger: ATTCTTTCTGCTATAATGGGAAATTGAAATGGATCAGATAAAAGTTAGATGCACAGTGACGGGAAAAGAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR GCA 72 bp | CAAGTGTACAATCTGTGGGTTATCTTGTATAATCAGTaGTTTACAAAAGTTTCCTACGTTTACACCTTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QVYNLWVILYNQ*FTKVSYVYTFQ Trigger: TTGAAAGGTGTAAACGTAGGAAACTTTTGTAAAGCACTGATTATACAAGATAACCCACAGATTGTACACTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | CCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAGAAGTGACCAAGGACGGGCTGCCCAGGCGGCTCTaGACCTGCCACAGCCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PSTSRNGDSVELEVTKDGLPRRL*TCHSRP Trigger: CGGGCGGCTGTGGCAGGTCCAGAGCCGCCTGGGCAG...CCCGTCCTTGGTCACTTCTAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
||
| CDS-3UTR GCA 90 bp | ATCAGTTTAGCAGAGAGGAAGAGTTCCCAAAGGGAGACGCTGTGCCAATGGTCAAGGCGGCTCTGGACCTaGCACAGCCGCCCGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISLAERKSSQRETLCQWSRRLWT*HSRPKA Trigger: GGCCTTCGGGCGGCTGTGGCAGGTCCAGAGCCGCCT...TGACCATTGGCACAGCGTCTCCCTTTGGGAACTCTTCCTCTCTGCTAAACTGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGAGAACAGGGTAACTTACACTCTGAAGAGCTACATGGAACCCTGGTCTCTGCCCAGGCGGCTCTaGACCTGCCACAGCCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RAENRVTYTLKSYMEPWSLPRRL*TCHSRP Trigger: CGGGCGGCTGTGGCAGGTCCAGAGCCGCCTGGGCAG...AGACCAGGGTTCCATGTAGCTCTTCAGAGTGTAAGTTACCCTGTTCTCTGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
||
| CDS-3UTR CCA 90 bp | CTCATACTTCGGCACCTTTCTCTGGGTGGCAGCACAGTTGCTGGCAGGTTAACACTCTGCAGGCCGGCCTaGGCCAAGCAGTTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LILRHLSLGGSTVAGRLTLCRPA*AKQFCS Trigger: GCTGCAGAACTGCTTGGCCCAGGCCGGCCTGCAGAG...TGTTAACCTGCCAGCAACTGTGCTGCCACCCAGAGAAAGGTGCCGAAGTATGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | CTCATACTTCGGCACCTTTCTCTGGGTGGCAGCACAGTTGCTGGCAGGTTAACAGCGCCGCCCTCTCTTTaGGGAAACCATACTCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LILRHLSLGGSTVAGRLTAPPSL*GNHTPR Trigger: CCGCGGAGTATGGTTTCCGCAAAGAGAGGGCGGCGC...TGTTAACCTGCCAGCAACTGTGCTGCCACCCAGAGAAAGGTGCCGAAGTATGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
||
| CDS-3UTR CCA 90 bp | GATGGGGGAGGAGGGTCTGTGATGAGCTGCCTTCTCTGCACTCTTCTCTTTTCCGAGGAGCCTGAGCACTaGAGTCGGAAGCATCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: DGGGGSVMSCLLCTLLFSEEPEH*SRKHHQ Trigger: CTGGTGATGCTTCCGACTCCAGTGCTCAGGCTCCTC...GGAAAAGAGAAGAGTGCAGAGAAGGCAGCTCATCACAGACCCTCCTCCCCCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | CTCATACTTCGGCACCTTTCTCTGGGTGGCAGCACAGTTGCTGGCAGGTTAACAGTCACGATGTTCCTGTaGCCCTGCAACTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LILRHLSLGGSTVAGRLTVTMFL*PCNCSS Trigger: GCTGGAGCAGTTGCAGGGTCACAGGAACATCGTGAC...TGTTAACCTGCCAGCAACTGTGCTGCCACCCAGAGAAAGGTGCCGAAGTATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
||
| CDS-3UTR TCA 90 bp | TTACAGTCAAAAGCCGATGACTCGGGACACTGCCCTCAGGCTGCAGACAGAGGCAAGCAGCAGACAGCGTaGTGGCACATTGGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQSKADDSGHCPQAADRGKQQTA*WHIGRE Trigger: TTCTCTCCCAATGTGCCATCACGCTGTCTGCTGCTT...GCCTCTGTCTGCAGCCTGAGGGCAGTGTCCCGAGTCATCGGCTTTTGACTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | TACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGTGCTAGGCGGCTCTGGACCTaGCACAGCCGCCCGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YREVFSKSTQCSSLKHSARRLWT*HSRPKA Trigger: GGCCTTCGGGCGGCTGTGGCAGGTCCAGAGCCGCCT...AGCACTGTGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
||
| CDS-3UTR CCA 90 bp | GATGGGGGAGGAGGGTCTGTGATGAGCTGCCTTCTCTGCACTCTTCTCTTTTCCGCTGTATCATCCACATaGAGCAGCCCTGATGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: DGGGGSVMSCLLCTLLFSAVSST*SSPDDW Trigger: CCAGTCATCAGGGCTGCTCCATGTGGATGATACAGC...GGAAAAGAGAAGAGTGCAGAGAAGGCAGCTCATCACAGACCCTCCTCCCCCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | CTCATACTTCGGCACCTTTCTCTGGGTGGCAGCACAGTTGCTGGCAGGTTAACATCGTGGTTTGAGGTCTaGATGGACGTAGCCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LILRHLSLGGSTVAGRLTSWFEV*MDVALM Trigger: CATGAGGGCTACGTCCATGCAGACCTCAAACCACGA...TGTTAACCTGCCAGCAACTGTGCTGCCACCCAGAGAAAGGTGCCGAAGTATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGTTTAGCAGAGAGGAAGAGTTCCCAAAGGGAGACGCTGTGCCAATGGTCAGAGGAGCCTGAGCACTaGAGTCGGAAGCATCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLAERKSSQRETLCQWSEEPEH*SRKHHQ Trigger: CTGGTGATGCTTCCGACTCCAGTGCTCAGGCTCCTC...TGACCATTGGCACAGCGTCTCCCTTTGGGAACTCTTCCTCTCTGCTAAACTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | CCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAGAAGTGACCAAGGACGGGGGATGTTTCGTGGTTTaGGGTCTGCATGGACGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSTSRNGDSVELEVTKDGGCFVV*GLHGRS Trigger: GCTACGTCCATGCAGACCTCAAACCACGAAACATCC...CCCGTCCTTGGTCACTTCTAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | TCCTACTCAGTGCCATGTTTGCAATGCAGTCACTGTCTGGGCAATGGCTGCACAGCTGTATCATCCACATaGAGCAGCCCTGATGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SYSVPCLQCSHCLGNGCTAVSST*SSPDDW Trigger: CCAGTCATCAGGGCTGCTCCATGTGGATGATACAGC...TGTGCAGCCATTGCCCAGACAGTGACTGCATTGCAAACATGGCACTGAGTAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTGCTCACACTTTATAGGGAGGTGGAAATAAAGTCCTCTGCTATTCAGCAACTCTGCAGGCCGGCCTaGGCCAAGCAGTTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVLTLYREVEIKSSAIQQLCRPA*AKQFCS Trigger: GCTGCAGAACTGCTTGGCCCAGGCCGGCCTGCAGAG...TTGCTGAATAGCAGAGGACTTTATTTCCACCTCCCTATAAAGTGTGAGCACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGTTTAGCAGAGAGGAAGAGTTCCCAAAGGGAGACGCTGTGCCAATGGTCAAAGCAGCAGACAGCGTaGTGGCACATTGGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISLAERKSSQRETLCQWSKQQTA*WHIGRE Trigger: TTCTCTCCCAATGTGCCATCACGCTGTCTGCTGCTT...TGACCATTGGCACAGCGTCTCCCTTTGGGAACTCTTCCTCTCTGCTAAACTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | TTACAGTCAAAAGCCGATGACTCGGGACACTGCCCTCAGGCTGCAGACAGAGGCACTGGTCCATATTTCTaGCACTCCTCTTTCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LQSKADDSGHCPQAADRGTGPYF*HSSFTS Trigger: AGATGTGAAAGAGGAGTGTCAGAAATATGGACCAGT...GCCTCTGTCTGCAGCCTGAGGGCAGTGTCCCGAGTCATCGGCTTTTGACTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGTTTAGCAGAGAGGAAGAGTTCCCAAAGGGAGACGCTGTGCCAATGGTCACAGCAGGGATTCTTCTaGCCGGGTCATCATGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISLAERKSSQRETLCQWSQQGFF*PGHHEA Trigger: TGCTTCATGATGACCCGGGCAGAAGAATCCCTGCTG...TGACCATTGGCACAGCGTCTCCCTTTGGGAACTCTTCCTCTCTGCTAAACTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | ACATTGATAGGCTCACTGCAGTTTCTTCGGAGGAATATTAAGTCCTACAGTACTCTCTGCAGGCCGGCCTaGGCCAAGCAGTTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLIGSLQFLRRNIKSYSTLCRPA*AKQFCS Trigger: GCTGCAGAACTGCTTGGCCCAGGCCGGCCTGCAGAG...AGTACTGTAGGACTTAATATTCCTCCGAAGAAACTGCAGTGAGCCTATCAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAATCTTGGGTCTACAGTAGAGCAGAGAACAGGGTAACTTACACTCTGAAGGAGGAGCCTGAGCACTaGAGTCGGAAGCATCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQSWVYSRAENRVTYTLKEEPEH*SRKHHQ Trigger: CTGGTGATGCTTCCGACTCCAGTGCTCAGGCTCCTC...CTTCAGAGTGTAAGTTACCCTGTTCTCTGCTCTACTGTAGACCCAAGATTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | AATGACATCTTTTTAGGTTACATAGTAAAGAGCAGCACCTGCCCTACTGCACAAGCGCCGCCCTCTCTTTaGGGAAACCATACTCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NDIFLGYIVKSSTCPTAQAPPSL*GNHTPR Trigger: CCGCGGAGTATGGTTTCCGCAAAGAGAGGGCGGCGC...TTGTGCAGTAGGGCAGGTGCTGCTCTTTACTATGTAACCTAAAAAGATGTCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
||
| CDS-3UTR GCA 90 bp | GGTTCACAGAATGCTGTGAGTACAGCAGTGTTAGCAGCATACTGCACGGTAAAGTCGTGGTTTGAGGTCTaGATGGACGTAGCCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: GSQNAVSTAVLAAYCTVKSWFEV*MDVALM Trigger: CATGAGGGCTACGTCCATGCAGACCTCAAACCACGA...CTTTACCGTGCAGTATGCTGCTAACACTGCTGTACTCACAGCATTCTGTGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | GATGGGGGAGGAGGGTCTGTGATGAGCTGCCTTCTCTGCACTCTTCTCTTTTCCATATACTTTACGTCCTaGTTGCCTTCTTTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DGGGGSVMSCLLCTLLFSIYFTS*LPSLKL Trigger: CAGCTTCAAAGAAGGCAATCAGGACGTAAAGTATAT...GGAAAAGAGAAGAGTGCAGAGAAGGCAGCTCATCACAGACCCTCCTCCCCCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | CCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAGAAGTGACCAAGGACGGGCCACAGATCAACAGCTaGGGTACATTCTGTATCACT | + |
|
Preference number: 4 (lower is better) Translates to: PSTSRNGDSVELEVTKDGPQINS*GTFCIT Trigger: AGTGATACAGAATGTACCTCAGCTGTTGATCTGTGG...CCCGTCCTTGGTCACTTCTAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCAGAGAACAGGGTAACTTACACTCTGAAGAGCTACATGGAACCCTGGTCTACATCTCGGGCACAGTaGTGTATCATCCACATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RAENRVTYTLKSYMEPWSTSRAQ*CIIHME Trigger: CTCCATGTGGATGATACAGCACTGTGCCCGAGATGT...AGACCAGGGTTCCATGTAGCTCTTCAGAGTGTAAGTTACCCTGTTCTCTGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCAGAGAACAGGGTAACTTACACTCTGAAGAGCTACATGGAACCCTGGTCTGAATGGGCTGCACAATaGCATCTCAGCAGGGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RAENRVTYTLKSYMEPWSEWAAQ*HLSRDS Trigger: AGAATCCCTGCTGAGATGGCATTGTGCAGCCCATTC...AGACCAGGGTTCCATGTAGCTCTTCAGAGTGTAAGTTACCCTGTTCTCTGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCACAGAATGCTGTGAGTACAGCAGTGTTAGCAGCATACTGCACGGTAAAGTCTGAGGTGATAGGCTaGAATTGCGGCATTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSQNAVSTAVLAAYCTVKSEVIG*NCGIHH Trigger: GTGGTGAATGCCGCAATTCCAGCCTATCACCTCAGA...CTTTACCGTGCAGTATGCTGCTAACACTGCTGTACTCACAGCATTCTGTGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | TCCTACTCAGTGCCATGTTTGCAATGCAGTCACTGTCTGGGCAATGGCTGCACAAGGAATGCTAAAGAATaGGCTGCACAATGCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SYSVPCLQCSHCLGNGCTRNAKE*AAQCHL Trigger: GAGATGGCATTGTGCAGCCCATTCTTTAGCATTCCT...TGTGCAGCCATTGCCCAGACAGTGACTGCATTGCAAACATGGCACTGAGTAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | TCCTACTCAGTGCCATGTTTGCAATGCAGTCACTGTCTGGGCAATGGCTGCACAACCAGATCTTCAATATaGGGGGCAAAAGGAATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SYSVPCLQCSHCLGNGCTTRSSI*GAKGML Trigger: TAGCATTCCTTTTGCCCCTCATATTGAAGATCTGGT...TGTGCAGCCATTGCCCAGACAGTGACTGCATTGCAAACATGGCACTGAGTAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | CTCATACTTCGGCACCTTTCTCTGGGTGGCAGCACAGTTGCTGGCAGGTTAACAAATAGCAGAACTGTTTaGCTTCCATTCCTGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LILRHLSLGGSTVAGRLTNSRTV*LPFLRS Trigger: AGATCTCAGGAATGGAAGGCAAACAGTTCTGCTATT...TGTTAACCTGCCAGCAACTGTGCTGCCACCCAGAGAAAGGTGCCGAAGTATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | CCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAGAAGTGACCAAGGACGGGAGCAGCCCTGATGACTaGAATATAAAAGCAATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PSTSRNGDSVELEVTKDGSSPDD*NIKAIP Trigger: CGGAATTGCTTTTATATTCCAGTCATCAGGGCTGCT...CCCGTCCTTGGTCACTTCTAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | AGGAATCTGCAGCTGTCCTCTTTGGTAAAATGGGCTAAGAGCTATCACACAATGGCTGTATCATCCACATaGAGCAGCCCTGATGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RNLQLSSLVKWAKSYHTMAVSST*SSPDDW Trigger: CCAGTCATCAGGGCTGCTCCATGTGGATGATACAGC...CATTGTGTGATAGCTCTTAGCCCATTTTACCAAAGAGGACAGCTGCAGATTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGCTCACACTTTATAGGGAGGTGGAAATAAAGTCCTCTGCTATTCAGCAAGGATGTTTCGTGGTTTaGGGTCTGCATGGACGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVLTLYREVEIKSSAIQQGCFVV*GLHGRS Trigger: GCTACGTCCATGCAGACCTCAAACCACGAAACATCC...TTGCTGAATAGCAGAGGACTTTATTTCCACCTCCCTATAAAGTGTGAGCACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | GGTTCACAGAATGCTGTGAGTACAGCAGTGTTAGCAGCATACTGCACGGTAAAGCCACAGATCAACAGCTaGGGTACATTCTGTATCACT | + |
|
Preference number: 4 (lower is better) Translates to: GSQNAVSTAVLAAYCTVKPQINS*GTFCIT Trigger: AGTGATACAGAATGTACCTCAGCTGTTGATCTGTGG...CTTTACCGTGCAGTATGCTGCTAACACTGCTGTACTCACAGCATTCTGTGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | CAAAATGTGCACTGTATAGTGCTTTGGAAGAATAAAGACGAACCGAAGGAGGCATCGTGGTTTGAGGTCTaGATGGACGTAGCCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QNVHCIVLWKNKDEPKEASWFEV*MDVALM Trigger: CATGAGGGCTACGTCCATGCAGACCTCAAACCACGA...TGCCTCCTTCGGTTCGTCTTTATTCTTCCAAAGCACTATACAGTGCACATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGTTTAGCAGAGAGGAAGAGTTCCCAAAGGGAGACGCTGTGCCAATGGTCATGCGGCATTCACCACTaGTTTACTGGCAAATATATG | + |
|
Preference number: 4 (lower is better) Translates to: ISLAERKSSQRETLCQWSCGIHH*FTGKYM Trigger: CATATATTTGCCAGTAAAGCAGTGGTGAATGCCGCA...TGACCATTGGCACAGCGTCTCCCTTTGGGAACTCTTCCTCTCTGCTAAACTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | CAAAATGTGCACTGTATAGTGCTTTGGAAGAATAAAGACGAACCGAAGGAGGCACAGCAGGGATTCTTCTaGCCGGGTCATCATGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QNVHCIVLWKNKDEPKEAQQGFF*PGHHEA Trigger: TGCTTCATGATGACCCGGGCAGAAGAATCCCTGCTG...TGCCTCCTTCGGTTCGTCTTTATTCTTCCAAAGCACTATACAGTGCACATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | ACATTGATAGGCTCACTGCAGTTTCTTCGGAGGAATATTAAGTCCTACAGTACTAAGCAGCAGACAGCGTaGTGGCACATTGGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLIGSLQFLRRNIKSYSTKQQTA*WHIGRE Trigger: TTCTCTCCCAATGTGCCATCACGCTGTCTGCTGCTT...AGTACTGTAGGACTTAATATTCCTCCGAAGAAACTGCAGTGAGCCTATCAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | AAGCACACTGAGCCTTCAAAAGAGCCACCACTTTTTCTTGGCATTATCATGACTCCAGTCAGCAACTTCTaGGCAGCTTTGGAATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KHTEPSKEPPLFLGIIMTPVSNF*AALESP Trigger: TGGTGATTCCAAAGCTGCTCAGAAGTTGCTGACTGG...AGTCATGATAATGCCAAGAAAAAGTGGTGGCTCTTTTGAAGGCTCAGTGTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCACAGAATGCTGTGAGTACAGCAGTGTTAGCAGCATACTGCACGGTAAAGTGCGGCATTCACCACTaGTTTACTGGCAAATATATG | + |
|
Preference number: 4 (lower is better) Translates to: GSQNAVSTAVLAAYCTVKCGIHH*FTGKYM Trigger: CATATATTTGCCAGTAAAGCAGTGGTGAATGCCGCA...CTTTACCGTGCAGTATGCTGCTAACACTGCTGTACTCACAGCATTCTGTGAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGTTTACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGCAGGGATTCTTCTaGCCGGGTCATCATGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCLQRSFQQKYAMQLAETQQGFF*PGHHEA Trigger: TGCTTCATGATGACCCGGGCAGAAGAATCCCTGCTG...TGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTAAACACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATGTGCACTGTATAGTGCTTTGGAAGAATAAAGACGAACCGAAGGAGGCACCACAGGATGTTTCGTaGTTTGAGGTCTGCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QNVHCIVLWKNKDEPKEAPQDVS*FEVCMD Trigger: GTCCATGCAGACCTCAAACCACGAAACATCCTGTGG...TGCCTCCTTCGGTTCGTCTTTATTCTTCCAAAGCACTATACAGTGCACATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTGCTCACACTTTATAGGGAGGTGGAAATAAAGTCCTCTGCTATTCAGCAATCTGAGGTGATAGGCTaGAATTGCGGCATTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVLTLYREVEIKSSAIQQSEVIG*NCGIHH Trigger: GTGGTGAATGCCGCAATTCCAGCCTATCACCTCAGA...TTGCTGAATAGCAGAGGACTTTATTTCCACCTCCCTATAAAGTGTGAGCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAATGTAGCCACAACAAACTTCCCGTCAAACATCCTCCCAGTCAGCAACTTAGGAATGCTAAAGAATaGGCTGCACAATGCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VECSHNKLPVKHPPSQQLRNAKE*AAQCHL Trigger: GAGATGGCATTGTGCAGCCCATTCTTTAGCATTCCT...AAGTTGCTGACTGGGAGGATGTTTGACGGGAAGTTTGTTGTGGCTACATTCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123399.2 |
||
| CDS-3UTR CCA 90 bp | AAGCACACTGAGCCTTCAAAAGAGCCACCACTTTTTCTTGGCATTATCATGACTACTTCTGAGCAGCTTTaGAATCACCAGCGTTCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KHTEPSKEPPLFLGIIMTTSEQL*NHQRSR Trigger: ACGCGAACGCTGGTGATTCCAAAGCTGCTCAGAAGT...AGTCATGATAATGCCAAGAAAAAGTGGTGGCTCTTTTGAAGGCTCAGTGTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATGTGCACTGTATAGTGCTTTGGAAGAATAAAGACGAACCGAAGGAGGCAACTTCTGAGCAGCTTTaGAATCACCAGCGTTCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QNVHCIVLWKNKDEPKEATSEQL*NHQRSR Trigger: ACGCGAACGCTGGTGATTCCAAAGCTGCTCAGAAGT...TGCCTCCTTCGGTTCGTCTTTATTCTTCCAAAGCACTATACAGTGCACATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | AAGGTACCCTTTAAAATGGGTAAAGGGGTGCTCCTGCATTCAGCTGTGGAATATCCACAGATCAACAGCTaGGGTACATTCTGTATCACT | + |
|
Preference number: 4 (lower is better) Translates to: KVPFKMGKGVLLHSAVEYPQINS*GTFCIT Trigger: AGTGATACAGAATGTACCTCAGCTGTTGATCTGTGG...ATATTCCACAGCTGAATGCAGGAGCACCCCTTTACCCATTTTAAAGGGTACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | GTAAAGGGGTGCTCCTGCATTCAGCTGTGGAATATAATAATCCAAGAAATGGAACCACAGGATGTTTCGTaGTTTGAGGTCTGCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VKGCSCIQLWNIIIQEMEPQDVS*FEVCMD Trigger: GTCCATGCAGACCTCAAACCACGAAACATCCTGTGG...TTCCATTTCTTGGATTATTATATTCCACAGCTGAATGCAGGAGCACCCCTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGTTTACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACATCTGAGGTGATAGGCTaGAATTGCGGCATTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCLQRSFQQKYAMQLAETSEVIG*NCGIHH Trigger: GTGGTGAATGCCGCAATTCCAGCCTATCACCTCAGA...TGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTAAACACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | GTAAAGGGGTGCTCCTGCATTCAGCTGTGGAATATAATAATCCAAGAAATGGAAGCAATTCCGAAACACTaGCATCCAGGAGTTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VKGCSCIQLWNIIIQEMEAIPKH*HPGVQA Trigger: TGCTTGAACTCCTGGATGTCAGTGTTTCGGAATTGC...TTCCATTTCTTGGATTATTATATTCCACAGCTGAATGCAGGAGCACCCCTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTTGTCAATTACATTCTATCTGTCAGACCAACTTTCAAGAAACCTATAGCCGGATGTTTCGTGGTTTaGGGTCTGCATGGACGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLVNYILSVRPTFKKPIAGCFVV*GLHGRS Trigger: GCTACGTCCATGCAGACCTCAAACCACGAAACATCC...GGCTATAGGTTTCTTGAAAGTTGGTCTGACAGATAGAATGTAATTGACAAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | AGGAATCTGCAGCTGTCCTCTTTGGTAAAATGGGCTAAGAGCTATCACACAATGACATTTCCAGTAAAATaGTTCCGAGGCTCCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RNLQLSSLVKWAKSYHTMTFPVK*FRGSTD Trigger: ATCTGTGGAGCCTCGGAATCATTTTACTGGAAATGT...CATTGTGTGATAGCTCTTAGCCCATTTTACCAAAGAGGACAGCTGCAGATTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAGAAAGGTAACTTGCCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAACATTTCCAGTAAAATaGTTCCGAGGCTCCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AKKGNLPSTSRNGDSVELTFPVK*FRGSTD Trigger: ATCTGTGGAGCCTCGGAATCATTTTACTGGAAATGT...TAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGGCAAGTTACCTTTCTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAGAAAGGTAACTTGCCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTATCCATTCCTGAGATCTaGCTGTATGTTTCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AKKGNLPSTSRNGDSVELSIPEI*LYVSAS Trigger: TGAAGCTGAAACATACAGTCAGATCTCAGGAATGGA...TAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGGCAAGTTACCTTTCTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | TACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGTGCTTTTGCCTTCCATTCCTaGGATCTGACTGTATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YREVFSKSTQCSSLKHSAFAFHS*DLTVCF Trigger: GAAACATACAGTCAGATCTCAGGAATGGAAGGCAAA...AGCACTGTGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAGAAAGGTAACTTGCCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTATTTGCCTTCCATTCCTaGGATCTGACTGTATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AKKGNLPSTSRNGDSVELFAFHS*DLTVCF Trigger: GAAACATACAGTCAGATCTCAGGAATGGAAGGCAAA...TAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGGCAAGTTACCTTTCTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAGAAAGGTAACTTGCCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAACCAGATCTTCAATATaGGGGGCAAAAGGAATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AKKGNLPSTSRNGDSVELTRSSI*GAKGML Trigger: TAGCATTCCTTTTGCCCCTCATATTGAAGATCTGGT...TAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGGCAAGTTACCTTTCTTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGAATTCACTTGTATCTTGTGGTCATCAGTAGAAACGTAGAGACCTGCTACCCAGTCAGCAACTTCTaGGCAGCTTTGGAATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KRIHLYLVVISRNVETCYPVSNF*AALESP Trigger: TGGTGATTCCAAAGCTGCTCAGAAGTTGCTGACTGG...GTAGCAGGTCTCTACGTTTCTACTGATGACCACAAGATACAAGTGAATTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTACCCTTTAAAATGGGTAAAGGGGTGCTCCTGCATTCAGCTGTGGAATATTGCGGCATTCACCACTaGTTTACTGGCAAATATATG | + |
|
Preference number: 4 (lower is better) Translates to: KVPFKMGKGVLLHSAVEYCGIHH*FTGKYM Trigger: CATATATTTGCCAGTAAAGCAGTGGTGAATGCCGCA...ATATTCCACAGCTGAATGCAGGAGCACCCCTTTACCCATTTTAAAGGGTACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | GTAAAGGGGTGCTCCTGCATTCAGCTGTGGAATATAATAATCCAAGAAATGGAAGTGATAGGCTGGAATTaGGGCATTCACCACTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VKGCSCIQLWNIIIQEMEVIGWN*GIHHCF Trigger: AAAGCAGTGGTGAATGCCGCAATTCCAGCCTATCAC...TTCCATTTCTTGGATTATTATATTCCACAGCTGAATGCAGGAGCACCCCTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGAATTCACTTGTATCTTGTGGTCATCAGTAGAAACGTAGAGACCTGCTACGAATGGGCTGCACAATaGCATCTCAGCAGGGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRIHLYLVVISRNVETCYEWAAQ*HLSRDS Trigger: AGAATCCCTGCTGAGATGGCATTGTGCAGCCCATTC...GTAGCAGGTCTCTACGTTTCTACTGATGACCACAAGATACAAGTGAATTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | CATACTTGCCCTTCAAAAGAATTCACTTGTATCTTGTGGTCATCAGTAGAAACGGAATGGGCTGCACAATaGCATCTCAGCAGGGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTCPSKEFTCILWSSVETEWAAQ*HLSRDS Trigger: AGAATCCCTGCTGAGATGGCATTGTGCAGCCCATTC...CGTTTCTACTGATGACCACAAGATACAAGTGAATTCTTTTGAAGGGCAAGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | AGGAATCTGCAGCTGTCCTCTTTGGTAAAATGGGCTAAGAGCTATCACACAATGAGCAGCCCTGATGACTaGAATATAAAAGCAATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RNLQLSSLVKWAKSYHTMSSPDD*NIKAIP Trigger: CGGAATTGCTTTTATATTCCAGTCATCAGGGCTGCT...CATTGTGTGATAGCTCTTAGCCCATTTTACCAAAGAGGACAGCTGCAGATTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | CATACTTGCCCTTCAAAAGAATTCACTTGTATCTTGTGGTCATCAGTAGAAACGCCACAGGATGTTTCGTaGTTTGAGGTCTGCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HTCPSKEFTCILWSSVETPQDVS*FEVCMD Trigger: GTCCATGCAGACCTCAAACCACGAAACATCCTGTGG...CGTTTCTACTGATGACCACAAGATACAAGTGAATTCTTTTGAAGGGCAAGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | AGGAATCTGCAGCTGTCCTCTTTGGTAAAATGGGCTAAGAGCTATCACACAATGATATACTTTACGTCCTaGTTGCCTTCTTTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNLQLSSLVKWAKSYHTMIYFTS*LPSLKL Trigger: CAGCTTCAAAGAAGGCAATCAGGACGTAAAGTATAT...CATTGTGTGATAGCTCTTAGCCCATTTTACCAAAGAGGACAGCTGCAGATTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | AAGCACACTGAGCCTTCAAAAGAGCCACCACTTTTTCTTGGCATTATCATGACTTCCATTCCTGAGATCTaGCTGTATGTTTCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KHTEPSKEPPLFLGIIMTSIPEI*LYVSAS Trigger: TGAAGCTGAAACATACAGTCAGATCTCAGGAATGGA...AGTCATGATAATGCCAAGAAAAAGTGGTGGCTCTTTTGAAGGCTCAGTGTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | AAGCACACTGAGCCTTCAAAAGAGCCACCACTTTTTCTTGGCATTATCATGACTACCAGATCTTCAATATaGGGGGCAAAAGGAATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KHTEPSKEPPLFLGIIMTTRSSI*GAKGML Trigger: TAGCATTCCTTTTGCCCCTCATATTGAAGATCTGGT...AGTCATGATAATGCCAAGAAAAAGTGGTGGCTCTTTTGAAGGCTCAGTGTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGAATTCACTTGTATCTTGTGGTCATCAGTAGAAACGTAGAGACCTGCTACGTGATAGGCTGGAATTaGGGCATTCACCACTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRIHLYLVVISRNVETCYVIGWN*GIHHCF Trigger: AAAGCAGTGGTGAATGCCGCAATTCCAGCCTATCAC...GTAGCAGGTCTCTACGTTTCTACTGATGACCACAAGATACAAGTGAATTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATGTGCACTGTATAGTGCTTTGGAAGAATAAAGACGAACCGAAGGAGGCAAGCAGCCCTGATGACTaGAATATAAAAGCAATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QNVHCIVLWKNKDEPKEASSPDD*NIKAIP Trigger: CGGAATTGCTTTTATATTCCAGTCATCAGGGCTGCT...TGCCTCCTTCGGTTCGTCTTTATTCTTCCAAAGCACTATACAGTGCACATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTTGTCAATTACATTCTATCTGTCAGACCAACTTTCAAGAAACCTATAGCCGTGATAGGCTGGAATTaGGGCATTCACCACTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLVNYILSVRPTFKKPIAVIGWN*GIHHCF Trigger: AAAGCAGTGGTGAATGCCGCAATTCCAGCCTATCAC...GGCTATAGGTTTCTTGAAAGTTGGTCTGACAGATAGAATGTAATTGACAAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | ACATTGATAGGCTCACTGCAGTTTCTTCGGAGGAATATTAAGTCCTACAGTACTATATACTTTACGTCCTaGTTGCCTTCTTTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLIGSLQFLRRNIKSYSTIYFTS*LPSLKL Trigger: CAGCTTCAAAGAAGGCAATCAGGACGTAAAGTATAT...AGTACTGTAGGACTTAATATTCCTCCGAAGAAACTGCAGTGAGCCTATCAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGAATTCACTTGTATCTTGTGGTCATCAGTAGAAACGTAGAGACCTGCTACACATTTCCAGTAAAATaGTTCCGAGGCTCCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KRIHLYLVVISRNVETCYTFPVK*FRGSTD Trigger: ATCTGTGGAGCCTCGGAATCATTTTACTGGAAATGT...GTAGCAGGTCTCTACGTTTCTACTGATGACCACAAGATACAAGTGAATTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTTGTCAATTACATTCTATCTGTCAGACCAACTTTCAAGAAACCTATAGCCACTGGTCCATATTTCTaGCACTCCTCTTTCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SLVNYILSVRPTFKKPIATGPYF*HSSFTS Trigger: AGATGTGAAAGAGGAGTGTCAGAAATATGGACCAGT...GGCTATAGGTTTCTTGAAAGTTGGTCTGACAGATAGAATGTAATTGACAAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | CATACTTGCCCTTCAAAAGAATTCACTTGTATCTTGTGGTCATCAGTAGAAACGAATAGCAGAACTGTTTaGCTTCCATTCCTGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: HTCPSKEFTCILWSSVETNSRTV*LPFLRS Trigger: AGATCTCAGGAATGGAAGGCAAACAGTTCTGCTATT...CGTTTCTACTGATGACCACAAGATACAAGTGAATTCTTTTGAAGGGCAAGTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CCA 90 bp | ATGAACTCTCTTGTCAATTACATTCTATCTGTCAGACCAACTTTCAAGAAACCTAGGAATGCTAAAGAATaGGCTGCACAATGCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: MNSLVNYILSVRPTFKKPRNAKE*AAQCHL Trigger: GAGATGGCATTGTGCAGCCCATTCTTTAGCATTCCT...AGGTTTCTTGAAAGTTGGTCTGACAGATAGAATGTAATTGACAAGAGAGTTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR GCA 90 bp | ATGAACTCTCTTGTCAATTACATTCTATCTGTCAGACCAACTTTCAAGAAACCTAATAGCAGAACTGTTTaGCTTCCATTCCTGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: MNSLVNYILSVRPTFKKPNSRTV*LPFLRS Trigger: AGATCTCAGGAATGGAAGGCAAACAGTTCTGCTATT...AGGTTTCTTGAAAGTTGGTCTGACAGATAGAATGTAATTGACAAGAGAGTTCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| 3UTR CAA 72 bp | GCACTATTATTCTCTTCCAACTACAGAGTTATAGTTTaGATAATGGCTACAAGTCTCCTCCTCCAAATACTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFSSNYRVIV*IMATSLLLQIL Trigger: AAGTATTTGGAGGAGGAGACTTGTAGCCATTATCAAAACTATAACTCTGTAGTTGGAAGAGAATAATAGTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS GCA 90 bp | GGGTACCGCAGCACCGCACCCGGTACACCGAGGCCGACGAGCCGCTaGCCAGGCGGCTCTGGACCTGCCACAGCCGCCCGAAGGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GYRSTAPGTPRPTSR*PGGSGPATAARRPP Trigger: TGGAGGCCTTCGGGCGGCTGTGGCAGGTCCAGAGCCGCCTGGGCAGCGGCTCGTCGGCCTCGGTGTACCGGGTGCGGTGCTGCGGTACCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
||
| CDS GCA 90 bp | CGATGTTCCTGTGACCCTGCAACTGCTCCAGCGCCGCCCTCTCTTTaGGGAAACCATACTCCGCGGCCGAGGCCGCAGCCCCGGTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RCSCDPATAPAPPSL*GNHTPRPRPQPRWF Trigger: GAACCACCGGGGCTGCGGCCTCGGCCGCGGAGTATGGTTTCCGCAAAGAGAGGGCGGCGCTGGAGCAGTTGCAGGGTCACAGGAACATCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
||
| CDS GCA 90 bp | CCGAGGCTCCACAGATCAACAGCTGAGGTACATTCTGTATCACTCTaGAGGCCGGCCTGGGCCAAGCAGTTCTGCAGCTCTGCTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRLHRSTAEVHSVSL*RPAWAKQFCSSASG Trigger: TCCTGAAGCAGAGCTGCAGAACTGCTTGGCCCAGGCCGGCCTGCAGAGTGATACAGAATGTACCTCAGCTGTTGATCTGTGGAGCCTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CAA 90 bp | TCCTACTCAGTGCCATGTTTGCAATGCAGTCACTGTCTGGGCAATGGCTGCACAAGCGCCGCCCTCTCTTaGCGGAAACCATACTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SYSVPCLQCSHCLGNGCTSAALS*RKPYSA Trigger: CGCGGAGTATGGTTTCCGCAAAGAGAGGGCGGCGCT...TGTGCAGCCATTGCCCAGACAGTGACTGCATTGCAAACATGGCACTGAGTAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
||
| CDS GCA 90 bp | TGTATCACTCTGCAGGCCGGCCTGGGCCAAGCAGTTCTGCAGCTCTaGTTCAGGAGCGCGATACCCGTCTGTCTGAATATACTTTACGTC | + |
|
Preference number: 5 (lower is better) Translates to: CITLQAGLGQAVLQL*FRSAIPVCLNILYV Trigger: GACGTAAAGTATATTCAGACAGACGGGTATCGCGCTCCTGAAGCAGAGCTGCAGAACTGCTTGGCCCAGGCCGGCCTGCAGAGTGATACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGTTTAGCAGAGAGGAAGAGTTCCCAAAGGGAGACGCTGTGCCAATGGTCAAGCGCCGCCCTCTCTTaGCGGAAACCATACTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: ISLAERKSSQRETLCQWSSAALS*RKPYSA Trigger: CGCGGAGTATGGTTTCCGCAAAGAGAGGGCGGCGCT...TGACCATTGGCACAGCGTCTCCCTTTGGGAACTCTTCCTCTCTGCTAAACTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
||
| CDS GCA 90 bp | ACACTCATTCTCCGCACTCCACAGGATGTTTCGTGGTTTGAGGTCTaGATGGACGTAGCCCTCATGGTGAAGAAAAGCGAGGGCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLILRTPQDVSWFEV*MDVALMVKKSEGLQ Trigger: CTGGAGGCCCTCGCTTTTCTTCACCATGAGGGCTACGTCCATGCAGACCTCAAACCACGAAACATCCTGTGGAGTGCGGAGAATGAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
||
| CDS TCA 90 bp | GAGAAGTGTATGGTAAAGACTCCATATAAAGTCACGATGTTCCTGTaGCCCTGCAACTGCTCCAGCGCCGCCCTCTCTTTGCGGAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: EKCMVKTPYKVTMFL*PCNCSSAALSLRKP Trigger: TGGTTTCCGCAAAGAGAGGGCGGCGCTGGAGCAGTTGCAGGGTCACAGGAACATCGTGACTTTATATGGAGTCTTTACCATACACTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
||
| CDS TCA 90 bp | GCCACAACAAACTTCCCGTCAAACATCCTCCCAGTCAGCAACTTCTaGGCAGCTTTGGAATCACCAGCGTTCGCGTACTCAACGAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: ATTNFPSNILPVSNF*AALESPAFAYSTKT Trigger: AGTCTTCGTTGAGTACGCGAACGCTGGTGATTCCAAAGCTGCTCAGAAGTTGCTGACTGGGAGGATGTTTGACGGGAAGTTTGTTGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000150821.8 |
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| CDS CCA 90 bp | CGAGGGCCTCCAGAACATCTCGGGCACAGTGCTGTATCATCCACATaGAGCAGCCCTGATGACTGGAATATAAAAGCAATTCCGAAACAC | + |
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Preference number: 5 (lower is better) Translates to: RGPPEHLGHSAVSST*SSPDDWNIKAIPKH Trigger: GTGTTTCGGAATTGCTTTTATATTCCAGTCATCAGGGCTGCTCCATGTGGATGATACAGCACTGTGCCCGAGATGTTCTGGAGGCCCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS-3UTR CAA 90 bp | ATCAGTTTAGCAGAGAGGAAGAGTTCCCAAAGGGAGACGCTGTGCCAATGGTCAGGTGATAGGCTGGAATaGCGGCATTCACCACTGCTT | + |
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Preference number: 5 (lower is better) Translates to: ISLAERKSSQRETLCQWSGDRLE*RHSPLL Trigger: AAGCAGTGGTGAATGCCGCAATTCCAGCCTATCACC...TGACCATTGGCACAGCGTCTCCCTTTGGGAACTCTTCCTCTCTGCTAAACTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS TCA 90 bp | TGGAGCAGCCCTGATGACTGGAATATAAAAGCAATTCCGAAACACTaGCATCCAGGAGTTCAAGCAGCAGACAGCGTGATGGCACATTGG | + |
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Preference number: 5 (lower is better) Translates to: WSSPDDWNIKAIPKH*HPGVQAADSVMAHW Trigger: CCAATGTGCCATCACGCTGTCTGCTGCTTGAACTCCTGGATGTCAGTGTTTCGGAATTGCTTTTATATTCCAGTCATCAGGGCTGCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS GCA 90 bp | TTCAATATGAGGGGCAAAAGGAATGCTAAAGAATGGGCTGCACAATaGCATCTCAGCAGGGATTCTTCTGCCCGGGTCATCATGAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: FNMRGKRNAKEWAAQ*HLSRDSSARVIMKH Trigger: ATGCTTCATGATGACCCGGGCAGAAGAATCCCTGCTGAGATGGCATTGTGCAGCCCATTCTTTAGCATTCCTTTTGCCCCTCATATTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS-3UTR CAA 90 bp | AGGAATCTGCAGCTGTCCTCTTTGGTAAAATGGGCTAAGAGCTATCACACAATGTCATCATCCAGCACATaGAGGAGCCTGAGCACTGGA | + |
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Preference number: 5 (lower is better) Translates to: RNLQLSSLVKWAKSYHTMSSSST*RSLSTG Trigger: TCCAGTGCTCAGGCTCCTCAATGTGCTGGATGATGA...CATTGTGTGATAGCTCTTAGCCCATTTTACCAAAGAGGACAGCTGCAGATTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS CCA 90 bp | AATAAGCTTAAAACACTCATTCTCCGCACTCCACAGGATGTTTCGTaGTTTGAGGTCTGCATGGACGTAGCCCTCATGGTGAAGAAAAGC | + |
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Preference number: 5 (lower is better) Translates to: NKLKTLILRTPQDVS*FEVCMDVALMVKKS Trigger: GCTTTTCTTCACCATGAGGGCTACGTCCATGCAGACCTCAAACCACGAAACATCCTGTGGAGTGCGGAGAATGAGTGTTTTAAGCTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS-3UTR CAA 90 bp | AAGGTACCCTTTAAAATGGGTAAAGGGGTGCTCCTGCATTCAGCTGTGGAATATCAGCGTGATGGCACATaGGGAGAGAAGTGTATGGTA | + |
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Preference number: 5 (lower is better) Translates to: KVPFKMGKGVLLHSAVEYQRDGT*GEKCMV Trigger: TACCATACACTTCTCTCCCAATGTGCCATCACGCTG...ATATTCCACAGCTGAATGCAGGAGCACCCCTTTACCCATTTTAAAGGGTACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS-3UTR CAA 90 bp | AAGCACACTGAGCCTTCAAAAGAGCCACCACTTTTTCTTGGCATTATCATGACTTCATCATCCAGCACATaGAGGAGCCTGAGCACTGGA | + |
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Preference number: 5 (lower is better) Translates to: KHTEPSKEPPLFLGIIMTSSSST*RSLSTG Trigger: TCCAGTGCTCAGGCTCCTCAATGTGCTGGATGATGA...AGTCATGATAATGCCAAGAAAAAGTGGTGGCTCTTTTGAAGGCTCAGTGTGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS-3UTR CAA 90 bp | AATGACATCTTTTTAGGTTACATAGTAAAGAGCAGCACCTGCCCTACTGCACAAGGTGATAGGCTGGAATaGCGGCATTCACCACTGCTT | + |
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Preference number: 5 (lower is better) Translates to: NDIFLGYIVKSSTCPTAQGDRLE*RHSPLL Trigger: AAGCAGTGGTGAATGCCGCAATTCCAGCCTATCACC...TTGTGCAGTAGGGCAGGTGCTGCTCTTTACTATGTAACCTAAAAAGATGTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS-3UTR CAA 90 bp | AATGACATCTTTTTAGGTTACATAGTAAAGAGCAGCACCTGCCCTACTGCACAATCATCATCCAGCACATaGAGGAGCCTGAGCACTGGA | + |
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Preference number: 5 (lower is better) Translates to: NDIFLGYIVKSSTCPTAQSSSST*RSLSTG Trigger: TCCAGTGCTCAGGCTCCTCAATGTGCTGGATGATGA...TTGTGCAGTAGGGCAGGTGCTGCTCTTTACTATGTAACCTAAAAAGATGTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS-3UTR CAA 90 bp | GCAAAGAAAGGTAACTTGCCGAGCACCTCAAGAAATGGGGATTCTGTTGAACTAGTACTCAACGAAGACTaGTCCTCTGCCAGGATTTTC | + |
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Preference number: 5 (lower is better) Translates to: AKKGNLPSTSRNGDSVELVLNED*SSARIF Trigger: GAAAATCCTGGCAGAGGACAAGTCTTCGTTGAGTAC...TAGTTCAACAGAATCCCCATTTCTTGAGGTGCTCGGCAAGTTACCTTTCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000150821.8 |
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| CDS-3UTR CAA 90 bp | TTGTGTTTACAGAGAAGTTTTCAGCAAAAGTACGCAATGCAGCTCGCTGAAACACAGCGTGATGGCACATaGGGAGAGAAGTGTATGGTA | + |
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Preference number: 5 (lower is better) Translates to: LCLQRSFQQKYAMQLAETQRDGT*GEKCMV Trigger: TACCATACACTTCTCTCCCAATGTGCCATCACGCTG...TGTTTCAGCGAGCTGCATTGCGTACTTTTGCTGAAAACTTCTCTGTAAACACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS-3UTR CAA 90 bp | CATACTTGCCCTTCAAAAGAATTCACTTGTATCTTGTGGTCATCAGTAGAAACGGGTGATAGGCTGGAATaGCGGCATTCACCACTGCTT | + |
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Preference number: 5 (lower is better) Translates to: HTCPSKEFTCILWSSVETGDRLE*RHSPLL Trigger: AAGCAGTGGTGAATGCCGCAATTCCAGCCTATCACC...CGTTTCTACTGATGACCACAAGATACAAGTGAATTCTTTTGAAGGGCAAGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS CCA 90 bp | GTCATCATGAAGCATGCTTTTGATAAGGTCTCTGAGGTGATAGGCTaGAATTGCGGCATTCACCACTGCTTTACTGGCAAATATATGATC | + |
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Preference number: 5 (lower is better) Translates to: VIMKHAFDKVSEVIG*NCGIHHCFTGKYMI Trigger: GATCATATATTTGCCAGTAAAGCAGTGGTGAATGCCGCAATTCCAGCCTATCACCTCAGAGACCTTATCAAAAGCATGCTTCATGATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS-3UTR CAA 90 bp | AAAAGAATTCACTTGTATCTTGTGGTCATCAGTAGAAACGTAGAGACCTGCTACCAGCGTGATGGCACATaGGGAGAGAAGTGTATGGTA | + |
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Preference number: 5 (lower is better) Translates to: KRIHLYLVVISRNVETCYQRDGT*GEKCMV Trigger: TACCATACACTTCTCTCCCAATGTGCCATCACGCTG...GTAGCAGGTCTCTACGTTTCTACTGATGACCACAAGATACAAGTGAATTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS-3UTR CAA 90 bp | AAGCACACTGAGCCTTCAAAAGAGCCACCACTTTTTCTTGGCATTATCATGACTTGCCAGGATTTTCCTTaGGAACAAGCAGAGAAACCA | + |
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Preference number: 5 (lower is better) Translates to: KHTEPSKEPPLFLGIIMTCQDFP*EQAEKP Trigger: TGGTTTCTCTGCTTGTTCCAAAGGAAAATCCTGGCA...AGTCATGATAATGCCAAGAAAAAGTGGTGGCTCTTTTGAAGGCTCAGTGTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000150821.8 |
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| CDS GCA 90 bp | ATGAAGCATGCTTTTGATAAGGTCTCTGAGGTGATAGGCTGGAATTaGGGCATTCACCACTGCTTTACTGGCAAATATATGATCAATAAT | + |
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Preference number: 5 (lower is better) Translates to: MKHAFDKVSEVIGWN*GIHHCFTGKYMINN Trigger: ATTATTGATCATATATTTGCCAGTAAAGCAGTGGTGAATGCCGCAATTCCAGCCTATCACCTCAGAGACCTTATCAAAAGCATGCTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS-3UTR CAA 90 bp | TCTCTTGTCAATTACATTCTATCTGTCAGACCAACTTTCAAGAAACCTATAGCCTGCCAGGATTTTCCTTaGGAACAAGCAGAGAAACCA | + |
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Preference number: 5 (lower is better) Translates to: SLVNYILSVRPTFKKPIACQDFP*EQAEKP Trigger: TGGTTTCTCTGCTTGTTCCAAAGGAAAATCCTGGCA...GGCTATAGGTTTCTTGAAAGTTGGTCTGACAGATAGAATGTAATTGACAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000150821.8 |
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| CDS GCA 72 bp | GAGGCCGACGAGCCGCTGCCCAGGCGGCTCTGGACCTaGCACAGCCGCCCGAAGGCCTCCAGGAAGCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: EADEPLPRRLWT*HSRPKASRKRG Trigger: GCCGCGCTTCCTGGAGGCCTTCGGGCGGCTGTGGCAGGTCCAGAGCCGCCTGGGCAGCGGCTCGTCGGCCTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
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| CDS GCA 72 bp | AGCACCGCACCCGGTACACCGAGGCCGACGAGCCGCTaGCCAGGCGGCTCTGGACCTGCCACAGCCGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: STAPGTPRPTSR*PGGSGPATAAR Trigger: TCGGGCGGCTGTGGCAGGTCCAGAGCCGCCTGGGCAGCGGCTCGTCGGCCTCGGTGTACCGGGTGCGGTGCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
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| CDS GCA 72 bp | TGTGACCCTGCAACTGCTCCAGCGCCGCCCTCTCTTTaGGGAAACCATACTCCGCGGCCGAGGCCGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: CDPATAPAPPSL*GNHTPRPRPQP Trigger: GGGCTGCGGCCTCGGCCGCGGAGTATGGTTTCCGCAAAGAGAGGGCGGCGCTGGAGCAGTTGCAGGGTCACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
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| CDS GCA 72 bp | GTATCACTCTGCAGGCCGGCCTGGGCCAAGCAGTTCTaGAGCTCTGCTTCAGGAGCGCGATACCCGTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: VSLCRPAWAKQF*SSASGARYPSV Trigger: GACAGACGGGTATCGCGCTCCTGAAGCAGAGCTGCAGAACTGCTTGGCCCAGGCCGGCCTGCAGAGTGATAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS GCA 72 bp | CTGCAGGCCGGCCTGGGCCAAGCAGTTCTGCAGCTCTaGTTCAGGAGCGCGATACCCGTCTGTCTGAATATA | + |
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Preference number: 6 (lower is better) Translates to: LQAGLGQAVLQL*FRSAIPVCLNI Trigger: TATATTCAGACAGACGGGTATCGCGCTCCTGAAGCAGAGCTGCAGAACTGCTTGGCCCAGGCCGGCCTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS GCA 72 bp | CTCCGCACTCCACAGGATGTTTCGTGGTTTGAGGTCTaGATGGACGTAGCCCTCATGGTGAAGAAAAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: LRTPQDVSWFEV*MDVALMVKKSE Trigger: CTCGCTTTTCTTCACCATGAGGGCTACGTCCATGCAGACCTCAAACCACGAAACATCCTGTGGAGTGCGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS TCA 72 bp | ATGGTAAAGACTCCATATAAAGTCACGATGTTCCTGTaGCCCTGCAACTGCTCCAGCGCCGCCCTCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: MVKTPYKVTMFL*PCNCSSAALSL Trigger: CAAAGAGAGGGCGGCGCTGGAGCAGTTGCAGGGTCACAGGAACATCGTGACTTTATATGGAGTCTTTACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 |
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| CDS TCA 72 bp | AACTTCCCGTCAAACATCCTCCCAGTCAGCAACTTCTaGGCAGCTTTGGAATCACCAGCGTTCGCGTACTCA | + |
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Preference number: 6 (lower is better) Translates to: NFPSNILPVSNF*AALESPAFAYS Trigger: TGAGTACGCGAACGCTGGTGATTCCAAAGCTGCTCAGAAGTTGCTGACTGGGAGGATGTTTGACGGGAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027979.14 ENSMUST00000150821.8 |
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| CDS CCA 72 bp | AAAACACTCATTCTCCGCACTCCACAGGATGTTTCGTaGTTTGAGGTCTGCATGGACGTAGCCCTCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: KTLILRTPQDVS*FEVCMDVALMV Trigger: CACCATGAGGGCTACGTCCATGCAGACCTCAAACCACGAAACATCCTGTGGAGTGCGGAGAATGAGTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS CCA 72 bp | GTAATCATCATCCAGCACATTGAGGAGCCTGAGCACTaGAGTCGGAAGCATCACCAGATCTTCAATATGAGG | + |
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Preference number: 6 (lower is better) Translates to: VIIIQHIEEPEH*SRKHHQIFNMR Trigger: CCTCATATTGAAGATCTGGTGATGCTTCCGACTCCAGTGCTCAGGCTCCTCAATGTGCTGGATGATGATTAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS CCA 72 bp | CCAGAACATCTCGGGCACAGTGCTGTATCATCCACATaGAGCAGCCCTGATGACTGGAATATAAAAGCAATT | + |
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Preference number: 6 (lower is better) Translates to: PEHLGHSAVSST*SSPDDWNIKAI Trigger: AATTGCTTTTATATTCCAGTCATCAGGGCTGCTCCATGTGGATGATACAGCACTGTGCCCGAGATGTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS TCA 72 bp | CCTGATGACTGGAATATAAAAGCAATTCCGAAACACTaGCATCCAGGAGTTCAAGCAGCAGACAGCGTGATG | + |
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Preference number: 6 (lower is better) Translates to: PDDWNIKAIPKH*HPGVQAADSVM Trigger: CATCACGCTGTCTGCTGCTTGAACTCCTGGATGTCAGTGTTTCGGAATTGCTTTTATATTCCAGTCATCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS CCA 72 bp | AAGCATGCTTTTGATAAGGTCTCTGAGGTGATAGGCTaGAATTGCGGCATTCACCACTGCTTTACTGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: KHAFDKVSEVIG*NCGIHHCFTGK Trigger: TTTGCCAGTAAAGCAGTGGTGAATGCCGCAATTCCAGCCTATCACCTCAGAGACCTTATCAAAAGCATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS GCA 72 bp | GCTTTTGATAAGGTCTCTGAGGTGATAGGCTGGAATTaGGGCATTCACCACTGCTTTACTGGCAAATATATG | + |
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Preference number: 6 (lower is better) Translates to: AFDKVSEVIGWN*GIHHCFTGKYM Trigger: CATATATTTGCCAGTAAAGCAGTGGTGAATGCCGCAATTCCAGCCTATCACCTCAGAGACCTTATCAAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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| CDS GCA 72 bp | TCTGAGGTGATAGGCTGGAATTGCGGCATTCACCACTaGTTTACTGGCAAATATATGATCAATAATAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SEVIGWNCGIHH*FTGKYMINNSR Trigger: TCTGCTATTATTGATCATATATTTGCCAGTAAAGCAGTGGTGAATGCCGCAATTCCAGCCTATCACCTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027979.14 ENSMUST00000123399.2 ENSMUST00000150821.8 |
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