Pregenerated sensors for UGT3A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049152Ensembl transcript IDs: ENSMUST00000072403.7
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TACGGAAGGCCTCTGAAGAGCCACAGACCTCCCATCCCTACACCAGAGCCAAGCCTGGGCAGGGGTCAGTaGGTGGGAGTGCCTGATAAT | + |
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Preference number: 4 (lower is better) Translates to: YGRPLKSHRPPIPTPEPSLGRGQ*VGVPDN Trigger: ATTATCAGGCACTCCCACCCACTGACCCCTGCCCAG...GCTTGGCTCTGGTGTAGGGATGGGAGGTCTGTGGCTCTTCAGAGGCCTTCCGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR TCA 90 bp | CTGAATTACGGAAGGCCTCTGAAGAGCCACAGACCTCCCATCCCTACACCAGAGGGAAAGCATATGGCTTaGGATGTGCTGCACCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LNYGRPLKSHRPPIPTPEGKHMA*DVLHPL Trigger: CAGGGGGTGCAGCACATCTCAAGCCATATGCTTTCC...CTCTGGTGTAGGGATGGGAGGTCTGTGGCTCTTCAGAGGCCTTCCGTAATTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR CCA 90 bp | GCTGAATTACGGAAGGCCTCTGAAGAGCCACAGACCTCCCATCCCTACACCAGAGCAGGGGTCAGTGGGTaGGAGTGCCTGATAATCTTG | + |
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Preference number: 4 (lower is better) Translates to: AELRKASEEPQTSHPYTRAGVSG*ECLIIL Trigger: CAAGATTATCAGGCACTCCCACCCACTGACCCCTGC...TCTGGTGTAGGGATGGGAGGTCTGTGGCTCTTCAGAGGCCTTCCGTAATTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR TCA 90 bp | CTGAATTACGGAAGGCCTCTGAAGAGCCACAGACCTCCCATCCCTACACCAGAGTTGTGGCCACCTTCATaGAGAACTTGCGACACACGG | + |
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Preference number: 4 (lower is better) Translates to: LNYGRPLKSHRPPIPTPELWPPS*RTCDTR Trigger: CCGTGTGTCGCAAGTTCTTCATGAAGGTGGCCACAA...CTCTGGTGTAGGGATGGGAGGTCTGTGGCTCTTCAGAGGCCTTCCGTAATTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR TCA 90 bp | GCTGAATTACGGAAGGCCTCTGAAGAGCCACAGACCTCCCATCCCTACACCAGAACCATGGGTACTCCATaGTGGACAGCCTCCATCACA | + |
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Preference number: 4 (lower is better) Translates to: AELRKASEEPQTSHPYTRTMGTP*WTASIT Trigger: TGTGATGGAGGCTGTCCATCATGGAGTACCCATGGT...TCTGGTGTAGGGATGGGAGGTCTGTGGCTCTTCAGAGGCCTTCCGTAATTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR CCA 90 bp | TACGGAAGGCCTCTGAAGAGCCACAGACCTCCCATCCCTACACCAGAGCCAAGCAAGGTCAGACAACACTaGCTGAGAGCCTTCCACAAA | + |
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Preference number: 4 (lower is better) Translates to: YGRPLKSHRPPIPTPEPSKVRQH*LRAFHK Trigger: TTTGTGGAAGGCTCTCAGCCAGTGTTGTCTGACCTT...GCTTGGCTCTGGTGTAGGGATGGGAGGTCTGTGGCTCTTCAGAGGCCTTCCGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR TCA 90 bp | GCTGAATTACGGAAGGCCTCTGAAGAGCCACAGACCTCCCATCCCTACACCAGATCAGACAACACTGGCTaGGAGCCTTCCACAAAATGC | + |
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Preference number: 4 (lower is better) Translates to: AELRKASEEPQTSHPYTRSDNTG*EPSTKC Trigger: GCATTTTGTGGAAGGCTCTCAGCCAGTGTTGTCTGA...TCTGGTGTAGGGATGGGAGGTCTGTGGCTCTTCAGAGGCCTTCCGTAATTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR GCA 90 bp | CTGAATTACGGAAGGCCTCTGAAGAGCCACAGACCTCCCATCCCTACACCAGAGGAGCCTTCCACAAAATaGTCCTGGATAGTGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LNYGRPLKSHRPPIPTPEEPSTK*SWIVLS Trigger: TGACAGCACTATCCAGGAGCATTTTGTGGAAGGCTC...CTCTGGTGTAGGGATGGGAGGTCTGTGGCTCTTCAGAGGCCTTCCGTAATTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR TCA 90 bp | CTGAATTACGGAAGGCCTCTGAAGAGCCACAGACCTCCCATCCCTACACCAGAGGCAAATTTCTTTTCCTaGTCTTCAGGTGGACGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LNYGRPLKSHRPPIPTPEANFFS*SSGGRQ Trigger: TTGGCGTCCACCTGAAGATCAGGAAAAGAAATTTGC...CTCTGGTGTAGGGATGGGAGGTCTGTGGCTCTTCAGAGGCCTTCCGTAATTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR TCA 90 bp | GCTGAATTACGGAAGGCCTCTGAAGAGCCACAGACCTCCCATCCCTACACCAGAAAGCAAAGTCAGAGTTaGCAAACCACAGCTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: AELRKASEEPQTSHPYTRKQSQS*QTTAQL Trigger: AAGCTGAGCTGTGGTTTGTCAACTCTGACTTTGCTT...TCTGGTGTAGGGATGGGAGGTCTGTGGCTCTTCAGAGGCCTTCCGTAATTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR TCA 90 bp | GCTGAATTACGGAAGGCCTCTGAAGAGCCACAGACCTCCCATCCCTACACCAGATCTTGGGGTATTGGCTaGACAGGTTTGTCCAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: AELRKASEEPQTSHPYTRSWGIG*TGLSSK Trigger: TTTACTGGACAAACCTGTTCAGCCAATACCCCAAGA...TCTGGTGTAGGGATGGGAGGTCTGTGGCTCTTCAGAGGCCTTCCGTAATTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR TCA 90 bp | GCTGAATTACGGAAGGCCTCTGAAGAGCCACAGACCTCCCATCCCTACACCAGATTGAGCGTCTGTAGCTaGATAGAAACACCAAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: AELRKASEEPQTSHPYTRLSVCS*IETPRF Trigger: GAACCTTGGTGTTTCTATTCAGCTACAGACGCTCAA...TCTGGTGTAGGGATGGGAGGTCTGTGGCTCTTCAGAGGCCTTCCGTAATTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR CCA 90 bp | CTGAATTACGGAAGGCCTCTGAAGAGCCACAGACCTCCCATCCCTACACCAGAGCTATACTCAGATACCTaGTTACAGCAACAAGAACCT | + |
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Preference number: 4 (lower is better) Translates to: LNYGRPLKSHRPPIPTPELYSDT*LQQQEP Trigger: AGGTTCTTGTTGCTGTAACCAGGTATCTGAGTATAG...CTCTGGTGTAGGGATGGGAGGTCTGTGGCTCTTCAGAGGCCTTCCGTAATTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR GCA 90 bp | CTGAATTACGGAAGGCCTCTGAAGAGCCACAGACCTCCCATCCCTACACCAGAGTATAGTCAGGATTTTTaGAGCCTCCAAGAGAATAAC | + |
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Preference number: 4 (lower is better) Translates to: LNYGRPLKSHRPPIPTPEYSQDF*SLQENN Trigger: GTTATTCTCTTGGAGGCTGCAAAAATCCTGACTATA...CTCTGGTGTAGGGATGGGAGGTCTGTGGCTCTTCAGAGGCCTTCCGTAATTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR TCA 90 bp | TGTCCAACTATGGTTTTAACCCCAAATGATAGAAGGGATAAAGAGAGGAAGAACCATTTGGGGCCAAACTaGCATCTTTGGGCCAATGAG | + |
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Preference number: 4 (lower is better) Translates to: CPTMVLTPNDRRDKERKNHLGPN*HLWANE Trigger: CTCATTGGCCCAAAGATGTCAGTTTGGCCCCAAATG...GTTCTTCCTCTCTTTATCCCTTCTATCATTTGGGGTTAAAACCATAGTTGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR GCA 90 bp | TGTCCAACTATGGTTTTAACCCCAAATGATAGAAGGGATAAAGAGAGGAAGAACACATCAAGCATGTACTaGTCATGCCATGGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: CPTMVLTPNDRRDKERKNTSSMY*SCHGCW Trigger: CCAGCAGCCATGGCATGAGCAGTACATGCTTGATGT...GTTCTTCCTCTCTTTATCCCTTCTATCATTTGGGGTTAAAACCATAGTTGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR CCA 90 bp | TGTCCAACTATGGTTTTAACCCCAAATGATAGAAGGGATAAAGAGAGGAAGAACCCCCAGAAGTCCATTTaGTCAGTTAGACCAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: CPTMVLTPNDRRDKERKNPQKSI*SVRPEP Trigger: TGGTTCTGGTCTAACTGACCAAATGGACTTCTGGGG...GTTCTTCCTCTCTTTATCCCTTCTATCATTTGGGGTTAAAACCATAGTTGGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR TCA 90 bp | TGTCCAACTATGGTTTTAACCCCAAATGATAGAAGGGATAAAGAGAGGAAGAACCACAAGGACAAAACCTaGGTCTCCAAACTGAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: CPTMVLTPNDRRDKERKNHKDKT*VSKLRD Trigger: ATCTCTCAGTTTGGAGACTCAGGTTTTGTCCTTGTG...GTTCTTCCTCTCTTTATCCCTTCTATCATTTGGGGTTAAAACCATAGTTGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR TCA 90 bp | CCAACTATGGTTTTAACCCCAAATGATAGAAGGGATAAAGAGAGGAAGAACATAAAGTCCCCAAAGTATTaGTGGATCTTTAGAAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: PTMVLTPNDRRDKERKNIKSPKY*WIFRRV Trigger: CACCCTTCTAAAGATCCATCAATACTTTGGGGACTT...TATGTTCTTCCTCTCTTTATCCCTTCTATCATTTGGGGTTAAAACCATAGTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR TCA 90 bp | CCAACTATGGTTTTAACCCCAAATGATAGAAGGGATAAAGAGAGGAAGAACATAATAGTGCTGTCATACTaGGAAAGGATTTCCCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: PTMVLTPNDRRDKERKNIIVLSY*ERISLC Trigger: GCAAAGGGAAATCCTTTCTCAGTATGACAGCACTAT...TATGTTCTTCCTCTCTTTATCCCTTCTATCATTTGGGGTTAAAACCATAGTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR TCA 90 bp | CCAACTATGGTTTTAACCCCAAATGATAGAAGGGATAAAGAGAGGAAGAACATACCTGAGTCTCCAAACTaGGAGATAAAATTCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: PTMVLTPNDRRDKERKNIPESPN*EIKFSK Trigger: CTTGGAGAATTTTATCTCTCAGTTTGGAGACTCAGG...TATGTTCTTCCTCTCTTTATCCCTTCTATCATTTGGGGTTAAAACCATAGTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR GCA 90 bp | CCAACTATGGTTTTAACCCCAAATGATAGAAGGGATAAAGAGAGGAAGAACATAGAAAGGATTTCCCTTTaGTTCATGGAGAAATCAAGG | + |
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Preference number: 4 (lower is better) Translates to: PTMVLTPNDRRDKERKNIERISL*FMEKSR Trigger: CCTTGATTTCTCCATGAAGCAAAGGGAAATCCTTTC...TATGTTCTTCCTCTCTTTATCCCTTCTATCATTTGGGGTTAAAACCATAGTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR CCA 90 bp | CCAACTATGGTTTTAACCCCAAATGATAGAAGGGATAAAGAGAGGAAGAACATATTCCTGATCTTCAGGTaGACGCCAATTAATAACTTG | + |
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Preference number: 4 (lower is better) Translates to: PTMVLTPNDRRDKERKNIFLIFR*TPINNL Trigger: CAAGTTATTAATTGGCGTCCACCTGAAGATCAGGAA...TATGTTCTTCCTCTCTTTATCCCTTCTATCATTTGGGGTTAAAACCATAGTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR CCA 90 bp | CCAACTATGGTTTTAACCCCAAATGATAGAAGGGATAAAGAGAGGAAGAACATAGAAGGGTGTGATGTTTaGACCTGCCATAAGTTATTT | + |
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Preference number: 4 (lower is better) Translates to: PTMVLTPNDRRDKERKNIEGCDV*TCHKLF Trigger: AAATAACTTATGGCAGGTCCAAACATCACACCCTTC...TATGTTCTTCCTCTCTTTATCCCTTCTATCATTTGGGGTTAAAACCATAGTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR GCA 90 bp | CCAACTATGGTTTTAACCCCAAATGATAGAAGGGATAAAGAGAGGAAGAACATATCTTCTGTAAGTCGATaGCTAAGATCAGCAAATTTC | + |
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Preference number: 4 (lower is better) Translates to: PTMVLTPNDRRDKERKNISSVSR*LRSANF Trigger: GAAATTTGCTGATCTTAGGCATCGACTTACAGAAGA...TATGTTCTTCCTCTCTTTATCCCTTCTATCATTTGGGGTTAAAACCATAGTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR GCA 90 bp | CCAACTATGGTTTTAACCCCAAATGATAGAAGGGATAAAGAGAGGAAGAACATATGTGATGTTTGGACCTaGCATAAGTTATTTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PTMVLTPNDRRDKERKNICDVWT*HKLFLL Trigger: CAGAAGAAATAACTTATGGCAGGTCCAAACATCACA...TATGTTCTTCCTCTCTTTATCCCTTCTATCATTTGGGGTTAAAACCATAGTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR CAA 90 bp | TACGGAAGGCCTCTGAAGAGCCACAGACCTCCCATCCCTACACCAGAGCCAAGCGCCATTGCTGCAGACTaGTACCTCTTGTCTTCTATG | + |
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Preference number: 5 (lower is better) Translates to: YGRPLKSHRPPIPTPEPSAIAAD*YLLSSM Trigger: CATAGAAGACAAGAGGTACAAGTCTGCAGCAATGGC...GCTTGGCTCTGGTGTAGGGATGGGAGGTCTGTGGCTCTTCAGAGGCCTTCCGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS CCA 90 bp | CAAGATATGATCTATCCAGCCCAAAAGCCTCTGGGCAGGGGTCAGTaGGTGGGAGTGCCTGATAATCTTGGAGGCCATTGCTGCAGACTT | + |
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Preference number: 5 (lower is better) Translates to: QDMIYPAQKPLGRGQ*VGVPDNLGGHCCRL Trigger: AAGTCTGCAGCAATGGCCTCCAAGATTATCAGGCACTCCCACCCACTGACCCCTGCCCAGAGGCTTTTGGGCTGGATAGATCATATCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS GCA 90 bp | CCCAGCATGAGCCCTAGGAGAAAGAGGAAGACATCAAGCATGTACTaGTCATGCCATGGCTGCTGGAAAGCATATGGCTTGAGATGTGCT | + |
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Preference number: 5 (lower is better) Translates to: PSMSPRRKRKTSSMY*SCHGCWKAYGLRCA Trigger: AGCACATCTCAAGCCATATGCTTTCCAGCAGCCATGGCATGAGCAGTACATGCTTGATGTCTTCCTCTTTCTCCTAGGGCTCATGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS-3UTR CAA 90 bp | CCAACTATGGTTTTAACCCCAAATGATAGAAGGGATAAAGAGAGGAAGAACATAAAAGCAAAGTCAGAGTaGACAAACCACAGCTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: PTMVLTPNDRRDKERKNIKAKSE*TNHSSA Trigger: AGCTGAGCTGTGGTTTGTCAACTCTGACTTTGCTTT...TATGTTCTTCCTCTCTTTATCCCTTCTATCATTTGGGGTTAAAACCATAGTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS CCA 72 bp | ATCTATCCAGCCCAAAAGCCTCTGGGCAGGGGTCAGTaGGTGGGAGTGCCTGATAATCTTGGAGGCCATTGC | + |
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Preference number: 6 (lower is better) Translates to: IYPAQKPLGRGQ*VGVPDNLGGHC Trigger: GCAATGGCCTCCAAGATTATCAGGCACTCCCACCCACTGACCCCTGCCCAGAGGCTTTTGGGCTGGATAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS CAA 72 bp | TGGGCAGGGGTCAGTGGGTGGGAGTGCCTGATAATCTaGGAGGCCATTGCTGCAGACTTGTACCTCTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: WAGVSGWECLII*EAIAADLYLLS Trigger: AGACAAGAGGTACAAGTCTGCAGCAATGGCCTCCAAGATTATCAGGCACTCCCACCCACTGACCCCTGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS TCA 72 bp | GTGAGCGCAAATGACTCTGCCTTGAGCGTCTGTAGCTaGATAGAAACACCAAGGTTCTTTGCTTCTACTCGG | + |
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Preference number: 6 (lower is better) Translates to: VSANDSALSVCS*IETPRFFASTR Trigger: CCGAGTAGAAGCAAAGAACCTTGGTGTTTCTATTCAGCTACAGACGCTCAAGGCAGAGTCATTTGCGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS GCA 72 bp | CAGTGGGTGGGAGTGCCTGATAATCTTGGAGGCCATTaGTGCAGACTTGTACCTCTTGTCTTCTATGATTTT | + |
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Preference number: 6 (lower is better) Translates to: QWVGVPDNLGGH*CRLVPLVFYDF Trigger: AAAATCATAGAAGACAAGAGGTACAAGTCTGCAGCAATGGCCTCCAAGATTATCAGGCACTCCCACCCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS CCA 72 bp | CAGGTTTGTCCAGTAAACCTCCCACATAGACTGTGTTaGGAAACAGGGGACGAGCAAAATCCAAAGCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: QVCPVNLPHRLC*ETGDEQNPKQS Trigger: ACTTTGCTTTGGATTTTGCTCGTCCCCTGTTTCCCAACACAGTCTATGTGGGAGGTTTACTGGACAAACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS CAA 72 bp | GCTAGAAGGTCAGTCTGTGGAAGCCAATCCATGATTTaGACATTTGGGGCCAAACTGACATCTTTGGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: ARRSVCGSQSMI*TFGAKLTSLGQ Trigger: TTGGCCCAAAGATGTCAGTTTGGCCCCAAATGTCAAAATCATGGATTGGCTTCCACAGACTGACCTTCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS TCA 72 bp | AAGGCACTGTTCATCTCCTTAATAATTTCCTTGGACTaGATCATGCTCACTATAGAGCCCAGGGCCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: KALFISLIISLD*IMLTIEPRATR Trigger: CCTTGTGGCCCTGGGCTCTATAGTGAGCATGATTCAGTCCAAGGAAATTATTAAGGAGATGAACAGTGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS TCA 72 bp | CCTTCCACAAAATGCTCCTGGATAGTGCTGTCATACTaGGAAAGGATTTCCCTTTGCTTCATGGAGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: PSTKCSWIVLSY*ERISLCFMEKS Trigger: TGATTTCTCCATGAAGCAAAGGGAAATCCTTTCTCAGTATGACAGCACTATCCAGGAGCATTTTGTGGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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| CDS CAA 72 bp | CTGGATAGTGCTGTCATACTGAGAAAGGATTTCCCTTaGCTTCATGGAGAAATCAAGGAACATCAGAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: LDSAVILRKDFP*LHGEIKEHQKV Trigger: AACTTTCTGATGTTCCTTGATTTCTCCATGAAGCAAAGGGAAATCCTTTCTCAGTATGACAGCACTATCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072403.7 |
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