Pregenerated sensors for UGT3A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072664Ensembl transcript IDs: ENSMUST00000022861.9
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAAGATGGAGGCAGAGAATGCTAGAGTTGCTATGTACTGAATTATaGAAGGCCTCTGATGAGCCACAGACCTCCCATCACCACACCAGA | + |
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Preference number: 1 (lower is better) Translates to: RRWRQRMLELLCTEL*KASDEPQTSHHHTR Trigger: TCTGGTGTGGTGATGGGAGGTCTGTGGCTCATCAGAGGCCTTCCATAATTCAGTACATAGCAACTCTAGCATTCTCTGCCTCCATCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| 3UTR TCA 90 bp | ATGAAGGTCACAAGAGGAAAACAAGGAGCAAAGGAGCCAAAAGTGTaGGGTACCAATTCAGGTGCATCTGTAGAAGATGGAGGCAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: MKVTRGKQGAKEPKV*GTNSGASVEDGGRE Trigger: TTCTCTGCCTCCATCTTCTACAGATGCACCTGAATTGGTACCTCACACTTTTGGCTCCTTTGCTCCTTGTTTTCCTCTTGTGACCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| 3UTR CCA 72 bp | AGGCAGAGAATGCTAGAGTTGCTATGTACTGAATTATaGAAGGCCTCTGATGAGCCACAGACCTCCCATCAC | + |
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Preference number: 3 (lower is better) Translates to: RQRMLELLCTEL*KASDEPQTSHH Trigger: GTGATGGGAGGTCTGTGGCTCATCAGAGGCCTTCCATAATTCAGTACATAGCAACTCTAGCATTCTCTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| 3UTR GCA 72 bp | AGCAAAGGAGCCAAAAGTGTGAGGTACCAATTCAGGTaGATCTGTAGAAGATGGAGGCAGAGAATGCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: SKGAKSVRYQFR*ICRRWRQRMLE Trigger: CTCTAGCATTCTCTGCCTCCATCTTCTACAGATGCACCTGAATTGGTACCTCACACTTTTGGCTCCTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| 3UTR TCA 72 bp | ACAAGAGGAAAACAAGGAGCAAAGGAGCCAAAAGTGTaGGGTACCAATTCAGGTGCATCTGTAGAAGATGGA | + |
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Preference number: 3 (lower is better) Translates to: TRGKQGAKEPKV*GTNSGASVEDG Trigger: TCCATCTTCTACAGATGCACCTGAATTGGTACCTCACACTTTTGGCTCCTTTGCTCCTTGTTTTCCTCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR CCA 90 bp | ACTGAATTATGGAAGGCCTCTGATGAGCCACAGACCTCCCATCACCACACCAGAGCAGGGGTCAGTGGGTaGGATTGCCTGATAACCTTG | + |
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Preference number: 4 (lower is better) Translates to: TELWKASDEPQTSHHHTRAGVSG*DCLITL Trigger: CAAGGTTATCAGGCAATCCCACCCACTGACCCCTGC...TCTGGTGTGGTGATGGGAGGTCTGTGGCTCATCAGAGGCCTTCCATAATTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR CCA 90 bp | AAAGAGAGGAAGAACATGAGGAGCCACAGGGCACACAGCCTATTGAAGCAGTGTCTGGGCAGGGGTCAGTaGGTGGGATTGCCTGATAAC | + |
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Preference number: 4 (lower is better) Translates to: KERKNMRSHRAHSLLKQCLGRGQ*VGLPDN Trigger: GTTATCAGGCAATCCCACCCACTGACCCCTGCCCAG...ACACTGCTTCAATAGGCTGTGTGCCCTGTGGCTCCTCATGTTCTTCCTCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR TCA 90 bp | CTATGTACTGAATTATGGAAGGCCTCTGATGAGCCACAGACCTCCCATCACCACTCAGACAACACTGGCTaGGAGCCTTCCGCAAAATGC | + |
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Preference number: 4 (lower is better) Translates to: LCTELWKASDEPQTSHHHSDNTG*EPSAKC Trigger: GCATTTTGCGGAAGGCTCTCAGCCAGTGTTGTCTGA...GTGGTGATGGGAGGTCTGTGGCTCATCAGAGGCCTTCCATAATTCAGTACATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR GCA 90 bp | CTGAATTATGGAAGGCCTCTGATGAGCCACAGACCTCCCATCACCACACCAGAAAACCTTGGAGGCCATTaGTGCAGTCTTGTACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LNYGRPLMSHRPPITTPENLGGH*CSLVPL Trigger: CAGAGGTACAAGACTGCAGCAATGGCCTCCAAGGTT...TTCTGGTGTGGTGATGGGAGGTCTGTGGCTCATCAGAGGCCTTCCATAATTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR GCA 90 bp | CTATGTACTGAATTATGGAAGGCCTCTGATGAGCCACAGACCTCCCATCACCACTGCTCATGCCATGGCTaGTGGAAAGCATATGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LCTELWKASDEPQTSHHHCSCHG*WKAYGL Trigger: CAAGCCATATGCTTTCCAGCAGCCATGGCATGAGCA...GTGGTGATGGGAGGTCTGTGGCTCATCAGAGGCCTTCCATAATTCAGTACATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR CCA 90 bp | ACTGAATTATGGAAGGCCTCTGATGAGCCACAGACCTCCCATCACCACACCAGACCCCAAAAGTCCATTTaGTCAGTTAGACCAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: TELWKASDEPQTSHHHTRPQKSI*SVRPEP Trigger: TGGTTCTGGTCTAACTGACCAAATGGACTTTTGGGG...TCTGGTGTGGTGATGGGAGGTCTGTGGCTCATCAGAGGCCTTCCATAATTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR CCA 90 bp | CTATGTACTGAATTATGGAAGGCCTCTGATGAGCCACAGACCTCCCATCACCACCAAGTCTTGGGGTATTaGCTGAACAGGTTTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LCTELWKASDEPQTSHHHQVLGY*LNRFVQ Trigger: CTGGACAAACCTGTTCAGCCAATACCCCAAGACTTG...GTGGTGATGGGAGGTCTGTGGCTCATCAGAGGCCTTCCATAATTCAGTACATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR TCA 90 bp | CTGAATTATGGAAGGCCTCTGATGAGCCACAGACCTCCCATCACCACACCAGAATCAAATGTCTTTTGCTaGTCTTCAGGTAGACGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LNYGRPLMSHRPPITTPESNVFC*SSGRRQ Trigger: TTGGCGTCTACCTGAAGATCAGCAAAAGACATTTGA...TTCTGGTGTGGTGATGGGAGGTCTGTGGCTCATCAGAGGCCTTCCATAATTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR TCA 90 bp | AAAAGGGATAAAGAGAGGAAGAACATGAGGAGCCACAGGGCACACAGCCTATTGACAAGGTACCCAGTGTaGGTCCTAACAGAAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: KRDKERKNMRSHRAHSLLTRYPV*VLTERG Trigger: TCCTCTTTCTGTTAGGACTCACACTGGGTACCTTGT...CAATAGGCTGTGTGCCCTGTGGCTCCTCATGTTCTTCCTCTCTTTATCCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR GCA 90 bp | AGTGTGAGGTACCAATTCAGGTGCATCTGTAGAAGATGGAGGCAGAGAATGCTAATATGGCTTGAGATGTaGTGCACCCCCTGTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: SVRYQFRCICRRWRQRMLIWLEM*CTPCLQ Trigger: TTGCAGACAGGGGGTGCAGCACATCTCAAGCCATAT...TAGCATTCTCTGCCTCCATCTTCTACAGATGCACCTGAATTGGTACCTCACACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR TCA 90 bp | ACTGAATTATGGAAGGCCTCTGATGAGCCACAGACCTCCCATCACCACACCAGACGCTTCTTGGTGAAATaGAAGAACATCAGAATGTTC | + |
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Preference number: 4 (lower is better) Translates to: TELWKASDEPQTSHHHTRRFLVK*KNIRMF Trigger: GAACATTCTGATGTTCTTTCATTTCACCAAGAAGCG...TCTGGTGTGGTGATGGGAGGTCTGTGGCTCATCAGAGGCCTTCCATAATTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR TCA 90 bp | AGTGTGAGGTACCAATTCAGGTGCATCTGTAGAAGATGGAGGCAGAGAATGCTAACCATTGGTACTCCATaGTGGACAGCCTCCATTACA | + |
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Preference number: 4 (lower is better) Translates to: SVRYQFRCICRRWRQRMLTIGTP*WTASIT Trigger: TGTAATGGAGGCTGTCCATCATGGAGTACCAATGGT...TAGCATTCTCTGCCTCCATCTTCTACAGATGCACCTGAATTGGTACCTCACACT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR GCA 90 bp | AAAGAGAGGAAGAACATGAGGAGCCACAGGGCACACAGCCTATTGAAGCAGTGTAACACCAAGGTTCTTTaGTTCTACTCGGACCATGTT | + |
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Preference number: 4 (lower is better) Translates to: KERKNMRSHRAHSLLKQCNTKVL*FYSDHV Trigger: AACATGGTCCGAGTAGAAGCAAAGAACCTTGGTGTT...ACACTGCTTCAATAGGCTGTGTGCCCTGTGGCTCCTCATGTTCTTCCTCTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR GCA 90 bp | CTAAGTAGGAATGAAGGTCACAAGAGGAAAACAAGGAGCAAAGGAGCCAAAAGTACATCCAGCATGTACTaGTCATGCCATGGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LSRNEGHKRKTRSKGAKSTSSMY*SCHGCW Trigger: CCAGCAGCCATGGCATGAGCAGTACATGCTGGATGT...ACTTTTGGCTCCTTTGCTCCTTGTTTTCCTCTTGTGACCTTCATTCCTACTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR CCA 90 bp | AAAGAGAGGAAGAACATGAGGAGCCACAGGGCACACAGCCTATTGAAGCAGTGTGCAGTCTTGTACCTCTaGTCTTCTATGACTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: KERKNMRSHRAHSLLKQCAVLYL*SSMTSF Trigger: GAAAGAAGTCATAGAAGACCAGAGGTACAAGACTGC...ACACTGCTTCAATAGGCTGTGTGCCCTGTGGCTCCTCATGTTCTTCCTCTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR TCA 90 bp | AAAAGGGATAAAGAGAGGAAGAACATGAGGAGCCACAGGGCACACAGCCTATTGCTTCATAAAGAAGTTTaGTTACATCGTGGCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: KRDKERKNMRSHRAHSLLLHKEV*LHRGHH Trigger: GTGGTGGCCACGATGTAATCAAACTTCTTTATGAAG...CAATAGGCTGTGTGCCCTGTGGCTCCTCATGTTCTTCCTCTCTTTATCCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR TCA 90 bp | AGTGTGAGGTACCAATTCAGGTGCATCTGTAGAAGATGGAGGCAGAGAATGCTACCTGAGTCTCCAAACTaGGAGATAAAATCCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: SVRYQFRCICRRWRQRMLPESPN*EIKSSK Trigger: CTTGGAGGATTTTATCTCTCAGTTTGGAGACTCAGG...TAGCATTCTCTGCCTCCATCTTCTACAGATGCACCTGAATTGGTACCTCACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR TCA 90 bp | AAAAGGGATAAAGAGAGGAAGAACATGAGGAGCCACAGGGCACACAGCCTATTGTTGAGTGTCTGTAGCTaGATAGAAACACCAAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: KRDKERKNMRSHRAHSLLLSVCS*IETPRF Trigger: GAACCTTGGTGTTTCTATTCAGCTACAGACACTCAA...CAATAGGCTGTGTGCCCTGTGGCTCCTCATGTTCTTCCTCTCTTTATCCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR CCA 90 bp | AAAGAGAGGAAGAACATGAGGAGCCACAGGGCACACAGCCTATTGAAGCAGTGTGTAGGGTGTGATATTTaGACCTCCCATAAGCATATT | + |
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Preference number: 4 (lower is better) Translates to: KERKNMRSHRAHSLLKQCVGCDI*TSHKHI Trigger: AATATGCTTATGGGAGGTCCAAATATCACACCCTAC...ACACTGCTTCAATAGGCTGTGTGCCCTGTGGCTCCTCATGTTCTTCCTCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR TCA 90 bp | AGCAAAGGAGCCAAAAGTGTGAGGTACCAATTCAGGTGCATCTGTAGAAGATGGCCCTTCGCTTCTTGGTaGAATGAAAGAACATCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SKGAKSVRYQFRCICRRWPFASW*NERTSE Trigger: TTCTGATGTTCTTTCATTTCACCAAGAAGCGAAGGG...CCATCTTCTACAGATGCACCTGAATTGGTACCTCACACTTTTGGCTCCTTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR CCA 90 bp | ACTGAATTATGGAAGGCCTCTGATGAGCCACAGACCTCCCATCACCACACCAGACGCCAATTAATAACCTaGTATGATGAGTTTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: TELWKASDEPQTSHHHTRRQLIT*YDEFSF Trigger: AAAGGAAAACTCATCATACCAGGTTATTAATTGGCG...TCTGGTGTGGTGATGGGAGGTCTGTGGCTCATCAGAGGCCTTCCATAATTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| 3UTR CAA 72 bp | TGCATCTGTAGAAGATGGAGGCAGAGAATGCTAGAGTaGCTATGTACTGAATTATGGAAGGCCTCTGATGAG | + |
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Preference number: 4 (lower is better) Translates to: CICRRWRQRMLE*LCTELWKASDE Trigger: CTCATCAGAGGCCTTCCATAATTCAGTACATAGCAACTCTAGCATTCTCTGCCTCCATCTTCTACAGATGCA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR CCA 90 bp | CTATGTACTGAATTATGGAAGGCCTCTGATGAGCCACAGACCTCCCATCACCACTTCCTTTCTAAAATCTaGGATATCACCACCTTCATA | + |
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Preference number: 4 (lower is better) Translates to: LCTELWKASDEPQTSHHHFLSKI*DITTFI Trigger: TATGAAGGTGGTGATATCCCAGATTTTAGAAAGGAA...GTGGTGATGGGAGGTCTGTGGCTCATCAGAGGCCTTCCATAATTCAGTACATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR CCA 90 bp | AGTTGCTATGTACTGAATTATGGAAGGCCTCTGATGAGCCACAGACCTCCCATCCATGATTTTGACATTTaGGGCCAAACTGACATCTTT | + |
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Preference number: 4 (lower is better) Translates to: SCYVLNYGRPLMSHRPPIHDFDI*GQTDIF Trigger: AAAGATGTCAGTTTGGCCCCAAATGTCAAAATCATG...GATGGGAGGTCTGTGGCTCATCAGAGGCCTTCCATAATTCAGTACATAGCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR CCA 90 bp | AAAGGAGCCAAAAGTGTGAGGTACCAATTCAGGTGCATCTGTAGAAGATGGAGGATATACTCAGATACCTaGTTACAGCAACAAGAACCT | + |
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Preference number: 4 (lower is better) Translates to: KGAKSVRYQFRCICRRWRIYSDT*LQQQEP Trigger: AGGTTCTTGTTGCTGTAACCAGGTATCTGAGTATAT...CCTCCATCTTCTACAGATGCACCTGAATTGGTACCTCACACTTTTGGCTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR TCA 90 bp | CTAAGTAGGAATGAAGGTCACAAGAGGAAAACAAGGAGCAAAGGAGCCAAAAGTTTTCTGCTTAATAAGTaGCTGCATAAGTCCGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LSRNEGHKRKTRSKGAKSFLLNK*LHKSAK Trigger: CTTTGCGGACTTATGCAGTCACTTATTAAGCAGAAA...ACTTTTGGCTCCTTTGCTCCTTGTTTTCCTCTTGTGACCTTCATTCCTACTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR GCA 90 bp | CTAAGTAGGAATGAAGGTCACAAGAGGAAAACAAGGAGCAAAGGAGCCAAAAGTTATAGTCAGGATTTTTaGAGCCTCCAAGAGAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: LSRNEGHKRKTRSKGAKSYSQDF*SLQEKN Trigger: GTTCTTCTCTTGGAGGCTGCAAAAATCCTGACTATA...ACTTTTGGCTCCTTTGCTCCTTGTTTTCCTCTTGTGACCTTCATTCCTACTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR CAA 90 bp | CTATGTACTGAATTATGGAAGGCCTCTGATGAGCCACAGACCTCCCATCACCACTGGAAAGCATATGGCTaGAGATGTGCTGCACCCCCT | + |
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Preference number: 5 (lower is better) Translates to: LCTELWKASDEPQTSHHHWKAYG*RCAAPP Trigger: AGGGGGTGCAGCACATCTCAAGCCATATGCTTTCCA...GTGGTGATGGGAGGTCTGTGGCTCATCAGAGGCCTTCCATAATTCAGTACATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS GCA 90 bp | CCCAGTGTGAGTCCTAACAGAAAGAGGAAGACATCCAGCATGTACTaGTCATGCCATGGCTGCTGGAAAGCATATGGCTTGAGATGTGCT | + |
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Preference number: 5 (lower is better) Translates to: PSVSPNRKRKTSSMY*SCHGCWKAYGLRCA Trigger: AGCACATCTCAAGCCATATGCTTTCCAGCAGCCATGGCATGAGCAGTACATGCTGGATGTCTTCCTCTTTCTGTTAGGACTCACACTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS CCA 90 bp | GATTGCCTGATAACCTTGGAGGCCATTGCTGCAGTCTTGTACCTCTaGTCTTCTATGACTTCTTTCATGGTGAGCAAAAATGACTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: DCLITLEAIAAVLYL*SSMTSFMVSKNDSA Trigger: GGCAGAGTCATTTTTGCTCACCATGAAAGAAGTCATAGAAGACCAGAGGTACAAGACTGCAGCAATGGCCTCCAAGGTTATCAGGCAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR CAA 90 bp | AGTTGCTATGTACTGAATTATGGAAGGCCTCTGATGAGCCACAGACCTCCCATCAGCCAATCCATGATTTaGACATTTGGGGCCAAACTG | + |
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Preference number: 5 (lower is better) Translates to: SCYVLNYGRPLMSHRPPISQSMI*TFGAKL Trigger: CAGTTTGGCCCCAAATGTCAAAATCATGGATTGGCT...GATGGGAGGTCTGTGGCTCATCAGAGGCCTTCCATAATTCAGTACATAGCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR CAA 90 bp | AGCAAAGGAGCCAAAAGTGTGAGGTACCAATTCAGGTGCATCTGTAGAAGATGGGACAGTATTGCCATATaGAGAAAAGATGTCCCTTCG | + |
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Preference number: 5 (lower is better) Translates to: SKGAKSVRYQFRCICRRWDSIAI*RKDVPS Trigger: CGAAGGGACATCTTTTCTCAATATGGCAATACTGTC...CCATCTTCTACAGATGCACCTGAATTGGTACCTCACACTTTTGGCTCCTTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS-3UTR CAA 90 bp | TCACAAGAGGAAAACAAGGAGCAAAGGAGCCAAAAGTGTGAGGTACCAATTCAGAAGAACAGAGATCCATaGAATCAAGAAGTACTAGGT | + |
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Preference number: 5 (lower is better) Translates to: SQEENKEQRSQKCEVPIQKNRDP*NQEVLG Trigger: ACCTAGTACTTCTTGATTCAATGGATCTCTGTTCTT...CTGAATTGGTACCTCACACTTTTGGCTCCTTTGCTCCTTGTTTTCCTCTTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS CAA 72 bp | GCCCACAAGCCTCTGGGCAGGGGTCAGTGGGTGGGATaGCCTGATAACCTTGGAGGCCATTGCTGCAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: AHKPLGRGQWVG*PDNLGGHCCSL Trigger: AAGACTGCAGCAATGGCCTCCAAGGTTATCAGGCAATCCCACCCACTGACCCCTGCCCAGAGGCTTGTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS CAA 72 bp | TGGGCAGGGGTCAGTGGGTGGGATTGCCTGATAACCTaGGAGGCCATTGCTGCAGTCTTGTACCTCTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: WAGVSGWDCLIT*EAIAAVLYLWS Trigger: AGACCAGAGGTACAAGACTGCAGCAATGGCCTCCAAGGTTATCAGGCAATCCCACCCACTGACCCCTGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS GCA 72 bp | CAGTGGGTGGGATTGCCTGATAACCTTGGAGGCCATTaGTGCAGTCTTGTACCTCTGGTCTTCTATGACTTC | + |
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Preference number: 6 (lower is better) Translates to: QWVGLPDNLGGH*CSLVPLVFYDF Trigger: GAAGTCATAGAAGACCAGAGGTACAAGACTGCAGCAATGGCCTCCAAGGTTATCAGGCAATCCCACCCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS GCA 72 bp | TGGGTGGGATTGCCTGATAACCTTGGAGGCCATTGCTaGAGTCTTGTACCTCTGGTCTTCTATGACTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: WVGLPDNLGGHC*SLVPLVFYDFF Trigger: AAAGAAGTCATAGAAGACCAGAGGTACAAGACTGCAGCAATGGCCTCCAAGGTTATCAGGCAATCCCACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS CCA 72 bp | CAGGTTTGTCCAGTAAACCTCCCACATAGACTGTGTTaGGAAACAGGGGACGAGCAAAATCCAAGGCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: QVCPVNLPHRLC*ETGDEQNPRQS Trigger: ACTTTGCCTTGGATTTTGCTCGTCCCCTGTTTCCCAACACAGTCTATGTGGGAGGTTTACTGGACAAACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS CAA 90 bp | AGTGGGTGGGATTGCCTGATAACCTTGGAGGCCATTGCTGCAGTCTaGTACCTCTGGTCTTCTATGACTTCTTTCATGGTGAGCAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: SGWDCLITLEAIAAV*YLWSSMTSFMVSKN Trigger: ATTTTTGCTCACCATGAAAGAAGTCATAGAAGACCAGAGGTACAAGACTGCAGCAATGGCCTCCAAGGTTATCAGGCAATCCCACCCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS TCA 72 bp | AAGGCACTGTTCATCTCCTTAATAATTTCCTTGGACTaGATCATGCTCACTACAGAGCCCAGGGCCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: KALFISLIISLD*IMLTTEPRATR Trigger: CCTTGTGGCCCTGGGCTCTGTAGTGAGCATGATTCAGTCCAAGGAAATTATTAAGGAGATGAACAGTGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS CAA 72 bp | GATTGCCTGATAACCTTGGAGGCCATTGCTGCAGTCTaGTACCTCTGGTCTTCTATGACTTCTTTCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: DCLITLEAIAAV*YLWSSMTSFMV Trigger: CACCATGAAAGAAGTCATAGAAGACCAGAGGTACAAGACTGCAGCAATGGCCTCCAAGGTTATCAGGCAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS CAA 72 bp | GCCTTCCGCAAAATGCTCCTGGACAGTATTGCCATATaGAGAAAAGATGTCCCTTCGCTTCTTGGTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: AFRKMLLDSIAI*RKDVPSLLGEM Trigger: CATTTCACCAAGAAGCGAAGGGACATCTTTTCTCAATATGGCAATACTGTCCAGGAGCATTTTGCGGAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS CAA 72 bp | GCTAGAAGGTCAATCTGTGGAAGCCAATCCATGATTTaGACATTTGGGGCCAAACTGACATCTTTGGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: ARRSICGSQSMI*TFGAKLTSLGQ Trigger: TTGGCCCAAAGATGTCAGTTTGGCCCCAAATGTCAAAATCATGGATTGGCTTCCACAGATTGACCTTCTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS CAA 72 bp | AAGTTTGATTACATCGTGGCCACCACCTTGCAGAATTaGCGACACACGGTTCATCAGTATATAATGACTGGC | + |
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Preference number: 6 (lower is better) Translates to: KFDYIVATTLQN*RHTVHQYIMTG Trigger: GCCAGTCATTATATACTGATGAACCGTGTGTCGCAAATTCTGCAAGGTGGTGGCCACGATGTAATCAAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS CCA 72 bp | ATAACCTTGGAGGCCATTGCTGCAGTCTTGTACCTCTaGTCTTCTATGACTTCTTTCATGGTGAGCAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: ITLEAIAAVLYL*SSMTSFMVSKN Trigger: ATTTTTGCTCACCATGAAAGAAGTCATAGAAGACCAGAGGTACAAGACTGCAGCAATGGCCTCCAAGGTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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| CDS CAA 72 bp | TTCATAAAGAAGTTTGATTACATCGTGGCCACCACCTaGCAGAATTTGCGACACACGGTTCATCAGTATATA | + |
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Preference number: 6 (lower is better) Translates to: FIKKFDYIVATT*QNLRHTVHQYI Trigger: TATATACTGATGAACCGTGTGTCGCAAATTCTGCAAGGTGGTGGCCACGATGTAATCAAACTTCTTTATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022861.9 |
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